View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19831_low_9 (Length: 264)

Name: NF19831_low_9
Description: NF19831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19831_low_9
NF19831_low_9
[»] chr7 (48 HSPs)
chr7 (16-255)||(29173422-29173653)
chr7 (5-158)||(4582894-4583043)
chr7 (16-158)||(5657529-5657667)
chr7 (14-158)||(8861260-8861400)
chr7 (5-162)||(21991607-21991760)
chr7 (5-162)||(43686012-43686164)
chr7 (5-158)||(12165727-12165876)
chr7 (5-160)||(32432430-32432576)
chr7 (5-158)||(15612796-15612944)
chr7 (3-159)||(30055500-30055653)
chr7 (2-159)||(41765112-41765265)
chr7 (3-159)||(32821088-32821240)
chr7 (16-159)||(26524375-26524514)
chr7 (24-158)||(34362205-34362334)
chr7 (14-159)||(22687216-22687354)
chr7 (16-131)||(26980325-26980436)
chr7 (15-157)||(24211717-24211855)
chr7 (5-158)||(6546494-6546643)
chr7 (3-159)||(18797303-18797453)
chr7 (3-159)||(12390665-12390817)
chr7 (5-157)||(48928601-48928748)
chr7 (5-157)||(33688299-33688446)
chr7 (98-156)||(8299192-8299250)
chr7 (16-156)||(25691592-25691729)
chr7 (5-156)||(27421417-27421563)
chr7 (3-158)||(37109847-37109998)
chr7 (3-156)||(23111167-23111316)
chr7 (3-159)||(17842621-17842773)
chr7 (15-158)||(7334769-7334908)
chr7 (3-158)||(27283719-27283870)
chr7 (2-157)||(38258521-38258672)
chr7 (3-160)||(31579099-31579257)
chr7 (5-135)||(48928334-48928459)
chr7 (21-158)||(37346997-37347130)
chr7 (18-158)||(31520774-31520909)
chr7 (3-159)||(9355861-9356013)
chr7 (2-121)||(35353120-35353236)
chr7 (14-80)||(11071255-11071321)
chr7 (110-158)||(23402371-23402419)
chr7 (14-158)||(10359261-10359400)
chr7 (3-74)||(10481660-10481731)
chr7 (110-156)||(3953733-3953779)
chr7 (113-162)||(241024-241073)
chr7 (110-159)||(40381939-40381988)
chr7 (110-162)||(22955312-22955364)
chr7 (15-61)||(34362149-34362195)
chr7 (23-64)||(43925167-43925208)
chr7 (16-80)||(44413427-44413491)
[»] chr6 (21 HSPs)
chr6 (5-160)||(3879974-3880125)
chr6 (16-159)||(8513232-8513371)
chr6 (5-156)||(6088910-6089057)
chr6 (5-156)||(21017147-21017294)
chr6 (5-159)||(4318858-4319008)
chr6 (5-135)||(15491638-15491764)
chr6 (2-158)||(7235067-7235218)
chr6 (5-157)||(20768087-20768233)
chr6 (16-156)||(30353404-30353540)
chr6 (5-156)||(29182165-29182312)
chr6 (23-159)||(18498432-18498565)
chr6 (2-158)||(33618834-33618986)
chr6 (5-158)||(33893038-33893186)
chr6 (16-159)||(1945832-1945972)
chr6 (15-159)||(5627390-5627530)
chr6 (110-159)||(19631748-19631797)
chr6 (15-160)||(7055260-7055401)
chr6 (18-80)||(6091231-6091293)
chr6 (110-156)||(6614036-6614082)
chr6 (110-159)||(11084152-11084201)
chr6 (109-158)||(24662189-24662238)
[»] scaffold0002 (4 HSPs)
scaffold0002 (5-160)||(132-283)
scaffold0002 (3-132)||(94417-94542)
scaffold0002 (106-159)||(408702-408755)
scaffold0002 (3-67)||(408463-408526)
[»] chr8 (42 HSPs)
chr8 (5-159)||(36695008-36695158)
chr8 (6-158)||(12876108-12876256)
chr8 (5-159)||(9864146-9864296)
chr8 (5-159)||(38643976-38644126)
chr8 (3-160)||(27082878-27083031)
chr8 (3-160)||(16446915-16447068)
chr8 (14-158)||(13307622-13307762)
chr8 (5-158)||(5299988-5300137)
chr8 (5-156)||(465843-465990)
chr8 (3-158)||(6098558-6098709)
chr8 (3-158)||(10555242-10555393)
chr8 (21-159)||(40862417-40862551)
chr8 (18-152)||(37970574-37970704)
chr8 (3-159)||(16222861-16223013)
chr8 (3-159)||(34894965-34895117)
chr8 (16-159)||(1204925-1205064)
chr8 (3-160)||(1150145-1150298)
chr8 (16-161)||(34952084-34952225)
chr8 (82-158)||(33906223-33906299)
chr8 (3-159)||(43643635-43643787)
chr8 (16-135)||(11727046-11727161)
chr8 (18-158)||(23854486-23854622)
chr8 (3-158)||(41362517-41362665)
chr8 (5-126)||(43025733-43025850)
chr8 (3-80)||(1149672-1149749)
chr8 (3-156)||(7890997-7891137)
chr8 (103-158)||(15009241-15009296)
chr8 (89-159)||(24823394-24823464)
chr8 (14-80)||(39099170-39099236)
chr8 (15-161)||(30654635-30654777)
chr8 (3-157)||(31933926-31934076)
chr8 (118-161)||(7998359-7998402)
chr8 (113-156)||(6446709-6446752)
chr8 (120-159)||(39099262-39099301)
chr8 (103-158)||(44869495-44869550)
chr8 (92-158)||(33197891-33197957)
chr8 (103-157)||(35459834-35459888)
chr8 (110-156)||(35735984-35736030)
chr8 (5-55)||(41911030-41911080)
chr8 (105-158)||(4133146-4133199)
chr8 (110-158)||(28220955-28221003)
chr8 (14-74)||(44869576-44869636)
[»] chr2 (50 HSPs)
chr2 (5-159)||(4166921-4167071)
chr2 (5-157)||(13711465-13711613)
chr2 (5-160)||(19424682-19424833)
chr2 (5-164)||(4264131-4264286)
chr2 (5-159)||(39167417-39167567)
chr2 (16-156)||(36641988-36642124)
chr2 (5-156)||(3176941-3177088)
chr2 (3-158)||(33551038-33551189)
chr2 (16-156)||(41463915-41464051)
chr2 (5-156)||(43770893-43771039)
chr2 (5-158)||(4478368-4478518)
chr2 (18-156)||(33660435-33660569)
chr2 (5-158)||(19313852-19314000)
chr2 (5-159)||(31570788-31570938)
chr2 (15-162)||(11366445-11366588)
chr2 (82-159)||(18494395-18494472)
chr2 (3-160)||(17071789-17071942)
chr2 (82-158)||(41465509-41465585)
chr2 (23-159)||(2325442-2325574)
chr2 (5-158)||(44913662-44913812)
chr2 (14-156)||(44285951-44286089)
chr2 (4-160)||(17054149-17054301)
chr2 (5-126)||(27349993-27350109)
chr2 (14-159)||(29242201-29242342)
chr2 (3-159)||(19289375-19289522)
chr2 (5-80)||(37905782-37905857)
chr2 (14-158)||(4763628-4763771)
chr2 (3-158)||(33902068-33902217)
chr2 (16-162)||(5881530-5881677)
chr2 (44-158)||(26357577-26357687)
chr2 (14-131)||(41051268-41051382)
chr2 (3-54)||(41960940-41960991)
chr2 (23-126)||(33709304-33709403)
chr2 (3-80)||(43648297-43648374)
chr2 (110-158)||(17245110-17245158)
chr2 (110-159)||(6177774-6177823)
chr2 (110-159)||(19093412-19093461)
chr2 (110-163)||(31861890-31861943)
chr2 (111-160)||(43446463-43446512)
chr2 (14-54)||(18494343-18494383)
chr2 (2-54)||(45327820-45327872)
chr2 (21-80)||(7006991-7007050)
chr2 (110-161)||(41643869-41643920)
chr2 (110-159)||(34441921-34441970)
chr2 (116-160)||(7007051-7007095)
chr2 (110-154)||(18947598-18947642)
chr2 (110-158)||(22963400-22963448)
chr2 (110-158)||(22998029-22998077)
chr2 (110-158)||(41713164-41713212)
chr2 (103-159)||(41960882-41960938)
[»] chr5 (54 HSPs)
chr5 (16-159)||(8741923-8742063)
chr5 (16-159)||(36860422-36860561)
chr5 (5-158)||(36866762-36866911)
chr5 (5-158)||(40133385-40133534)
chr5 (5-156)||(25500952-25501099)
chr5 (5-159)||(19119858-19120008)
chr5 (5-156)||(26268076-26268223)
chr5 (16-156)||(5837557-5837693)
chr5 (18-158)||(7693230-7693366)
chr5 (14-159)||(27330305-27330444)
chr5 (16-158)||(22019632-22019770)
chr5 (5-159)||(30969350-30969500)
chr5 (16-161)||(9200230-9200371)
chr5 (3-161)||(1429169-1429323)
chr5 (3-157)||(22980794-22980944)
chr5 (5-162)||(39572815-39572968)
chr5 (3-159)||(24886101-24886255)
chr5 (16-158)||(15724490-15724626)
chr5 (3-156)||(699152-699301)
chr5 (18-159)||(5112352-5112489)
chr5 (2-158)||(31786669-31786821)
chr5 (5-157)||(32563150-32563298)
chr5 (16-159)||(8466744-8466882)
chr5 (2-159)||(38528260-38528412)
chr5 (2-158)||(14409350-14409501)
chr5 (16-158)||(21088803-21088941)
chr5 (3-156)||(27318511-27318660)
chr5 (14-158)||(23116257-23116397)
chr5 (2-146)||(33908245-33908385)
chr5 (82-161)||(35933899-35933978)
chr5 (14-159)||(12910349-12910495)
chr5 (3-80)||(22255256-22255333)
chr5 (18-159)||(35826522-35826659)
chr5 (3-159)||(22974106-22974258)
chr5 (5-121)||(25668687-25668798)
chr5 (23-162)||(8436962-8437097)
chr5 (82-158)||(16004475-16004552)
chr5 (3-157)||(31705636-31705785)
chr5 (110-165)||(22616487-22616542)
chr5 (5-75)||(15992566-15992636)
chr5 (3-158)||(35511501-35511652)
chr5 (15-73)||(43308688-43308746)
chr5 (5-119)||(28416553-28416663)
chr5 (21-80)||(5829975-5830034)
chr5 (103-158)||(26317804-26317859)
chr5 (17-156)||(11898004-11898139)
chr5 (3-80)||(7208888-7208964)
chr5 (82-159)||(13956444-13956521)
chr5 (104-160)||(13380493-13380549)
chr5 (16-80)||(14919565-14919629)
chr5 (110-162)||(36055874-36055926)
chr5 (115-158)||(33753050-33753093)
chr5 (3-80)||(23954813-23954891)
chr5 (5-57)||(35933992-35934044)
[»] chr3 (54 HSPs)
chr3 (5-162)||(11466811-11466964)
chr3 (16-158)||(4015451-4015589)
chr3 (5-159)||(34132925-34133075)
chr3 (5-159)||(35844316-35844466)
chr3 (3-159)||(48354931-48355083)
chr3 (5-159)||(21193596-21193746)
chr3 (2-159)||(22450958-22451111)
chr3 (16-160)||(44186548-44186688)
chr3 (3-158)||(51213015-51213166)
chr3 (3-158)||(37203058-37203209)
chr3 (14-161)||(40552304-40552447)
chr3 (3-159)||(11357398-11357554)
chr3 (18-156)||(46297811-46297945)
chr3 (17-160)||(7327530-7327670)
chr3 (5-145)||(40935995-40936131)
chr3 (5-160)||(52040958-52041110)
chr3 (5-158)||(45174494-45174645)
chr3 (3-161)||(26941294-26941448)
chr3 (16-148)||(29099356-29099484)
chr3 (5-160)||(3655238-3655389)
chr3 (3-159)||(4761683-4761837)
chr3 (3-158)||(37157699-37157849)
chr3 (5-151)||(24488998-24489140)
chr3 (2-159)||(33378818-33378968)
chr3 (3-80)||(42506109-42506186)
chr3 (5-118)||(2007964-2008073)
chr3 (16-159)||(47481512-47481651)
chr3 (3-156)||(53229186-53229336)
chr3 (98-159)||(55343409-55343470)
chr3 (3-159)||(39282643-39282794)
chr3 (3-158)||(20373330-20373481)
chr3 (3-65)||(38591778-38591840)
chr3 (110-159)||(40640634-40640683)
chr3 (44-155)||(32373466-32373571)
chr3 (5-158)||(44891498-44891637)
chr3 (14-156)||(43975933-43976068)
chr3 (5-68)||(53176131-53176194)
chr3 (104-157)||(11835737-11835790)
chr3 (85-157)||(25579731-25579803)
chr3 (2-158)||(27480412-27480564)
chr3 (16-158)||(3362243-3362382)
chr3 (110-160)||(45879498-45879548)
chr3 (15-80)||(21009848-21009913)
chr3 (16-160)||(22446111-22446252)
chr3 (3-64)||(24708151-24708212)
chr3 (110-158)||(47930666-47930714)
chr3 (110-158)||(53811976-53812024)
chr3 (103-157)||(29163839-29163893)
chr3 (110-156)||(53818509-53818555)
chr3 (110-155)||(38392628-38392673)
chr3 (109-158)||(42204342-42204391)
chr3 (111-155)||(4556543-4556587)
chr3 (18-62)||(46994710-46994754)
chr3 (110-158)||(49359628-49359676)
[»] chr4 (56 HSPs)
chr4 (5-158)||(55241167-55241315)
chr4 (5-156)||(27396618-27396765)
chr4 (16-156)||(34948170-34948306)
chr4 (5-156)||(17167715-17167862)
chr4 (5-156)||(17173292-17173439)
chr4 (14-159)||(29584271-29584410)
chr4 (5-158)||(49375966-49376116)
chr4 (3-159)||(38011853-38012005)
chr4 (3-158)||(19089513-19089664)
chr4 (2-158)||(28003045-28003197)
chr4 (16-157)||(4597994-4598130)
chr4 (24-158)||(7703517-7703647)
chr4 (14-159)||(25701128-25701269)
chr4 (3-158)||(19440708-19440860)
chr4 (24-156)||(47253751-47253878)
chr4 (3-160)||(37663801-37663952)
chr4 (16-133)||(54499311-54499425)
chr4 (18-159)||(35021110-35021247)
chr4 (21-158)||(39397918-39398051)
chr4 (3-162)||(25184109-25184264)
chr4 (26-160)||(37287731-37287862)
chr4 (3-159)||(55477951-55478107)
chr4 (5-135)||(23761095-23761221)
chr4 (18-156)||(36493763-36493897)
chr4 (5-156)||(33341397-33341547)
chr4 (24-159)||(30002705-30002836)
chr4 (5-132)||(32592119-32592242)
chr4 (49-159)||(4205115-4205221)
chr4 (3-160)||(42199727-42199880)
chr4 (24-160)||(35025669-35025801)
chr4 (17-159)||(34361566-34361703)
chr4 (3-160)||(879608-879761)
chr4 (5-157)||(37775670-37775816)
chr4 (15-159)||(32912652-32912792)
chr4 (2-156)||(5048024-5048174)
chr4 (110-159)||(38812260-38812309)
chr4 (103-159)||(17272010-17272066)
chr4 (104-156)||(20097485-20097537)
chr4 (3-74)||(4934262-4934333)
chr4 (5-144)||(50764746-50764879)
chr4 (3-159)||(9139246-9139396)
chr4 (103-156)||(52516599-52516652)
chr4 (103-159)||(3042610-3042666)
chr4 (110-158)||(38811813-38811861)
chr4 (3-66)||(6864123-6864186)
chr4 (5-161)||(33816595-33816747)
chr4 (110-159)||(2704511-2704560)
chr4 (82-159)||(7152241-7152318)
chr4 (104-157)||(51204580-51204633)
chr4 (110-156)||(33255501-33255547)
chr4 (109-159)||(47073656-47073706)
chr4 (82-159)||(32579443-32579520)
chr4 (14-128)||(46888228-46888338)
chr4 (3-80)||(50697316-50697392)
chr4 (103-159)||(4396325-4396381)
chr4 (103-155)||(6864038-6864090)
[»] chr1 (55 HSPs)
chr1 (3-156)||(15752027-15752176)
chr1 (5-158)||(38823210-38823359)
chr1 (5-147)||(47279196-47279334)
chr1 (3-159)||(16415640-16415793)
chr1 (4-160)||(2959742-2959894)
chr1 (17-159)||(11742394-11742531)
chr1 (5-158)||(3309144-3309292)
chr1 (24-159)||(1547282-1547413)
chr1 (5-135)||(27533011-27533137)
chr1 (5-159)||(39393378-39393528)
chr1 (5-159)||(48620632-48620782)
chr1 (16-158)||(7079105-7079254)
chr1 (5-156)||(238544-238690)
chr1 (3-157)||(10922724-10922874)
chr1 (5-161)||(18422644-18422796)
chr1 (2-157)||(14758038-14758189)
chr1 (5-159)||(10182039-10182189)
chr1 (2-158)||(31621581-31621733)
chr1 (2-159)||(15168084-15168244)
chr1 (5-159)||(34012408-34012558)
chr1 (14-159)||(37618932-37619077)
chr1 (14-158)||(21289661-21289808)
chr1 (3-158)||(47682523-47682673)
chr1 (3-159)||(15382928-15383080)
chr1 (15-159)||(19899810-19899950)
chr1 (2-135)||(4330298-4330429)
chr1 (3-142)||(9903083-9903218)
chr1 (3-158)||(42721035-42721186)
chr1 (3-160)||(30254418-30254570)
chr1 (5-159)||(32267029-32267179)
chr1 (3-67)||(25160715-25160779)
chr1 (5-68)||(27227516-27227579)
chr1 (3-158)||(27267228-27267376)
chr1 (18-121)||(32216088-32216187)
chr1 (5-159)||(3534927-3535077)
chr1 (3-68)||(28564810-28564875)
chr1 (103-159)||(22170749-22170805)
chr1 (5-126)||(40884841-40884958)
chr1 (5-162)||(41926155-41926308)
chr1 (14-158)||(30326992-30327132)
chr1 (105-158)||(27227604-27227657)
chr1 (2-156)||(33725628-33725778)
chr1 (3-67)||(28769735-28769799)
chr1 (110-158)||(43579242-43579290)
chr1 (3-62)||(8222216-8222275)
chr1 (113-159)||(4150490-4150536)
chr1 (15-80)||(23999417-23999482)
chr1 (103-160)||(30254852-30254909)
chr1 (3-80)||(51128929-51129006)
chr1 (3-132)||(37451308-37451432)
chr1 (110-160)||(13876919-13876969)
chr1 (110-160)||(16132473-16132523)
chr1 (105-158)||(23999343-23999396)
chr1 (15-80)||(46931481-46931546)
chr1 (113-158)||(47279159-47279204)
[»] scaffold0291 (1 HSPs)
scaffold0291 (3-156)||(7889-8038)
[»] scaffold0061 (1 HSPs)
scaffold0061 (3-156)||(43959-44108)
[»] scaffold0017 (1 HSPs)
scaffold0017 (3-156)||(154679-154828)
[»] scaffold0318 (1 HSPs)
scaffold0318 (5-156)||(11908-12058)
[»] scaffold0009 (2 HSPs)
scaffold0009 (82-160)||(42346-42424)
scaffold0009 (103-159)||(100820-100876)
[»] scaffold0262 (1 HSPs)
scaffold0262 (109-158)||(12137-12186)
[»] scaffold0022 (1 HSPs)
scaffold0022 (15-80)||(146062-146127)


Alignment Details
Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 16 - 255
Target Start/End: Complemental strand, 29173653 - 29173422
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||| |||||||    |||||||||||| ||||||| ||||||||||    
T  29173653 tgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggagtgttac----tcacaacacttttgatactacagtgttaact 29173558  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcctatagtagacaaacacaagatttatgattttataagcataaaccacaaagttgtgtt 215  Q
    ||||||||||||||||||  |||| ||||| |||||||||| ||||||    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29173557 tcaccagaaaagtcattcatgtgacttcac-atagaatttttctatagg---caaacacaagatttatgattttataagcataaaacacaaagttgtgtt 29173462  T
Q  216 gagttttaagtgtgagtggttaagtatcacaacacctatg 255  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  29173461 gagttttaagtgtaagtggttaagtatcacaacatctatg 29173422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 4583043 - 4582894
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||| |||||||||| ||||| ||||||||||| ||||||||||| | |||||||||||    |||||||| ||| |||||||    
T  4583043 tcttgttagtctgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaatagtggggtgttac----tcacaacatttttgatacta 4582948  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  4582947 tagtattaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcc 4582894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 5657529 - 5657667
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||||||||  |||| |||||||||||||| |||||||||| |||||||||||    |||||||||||| |||  |||||||||||||    
T  5657529 tgatgaattgatgatactatgaagactgaacttttgatgccactgtacaaacagtggggtgttac----tcacaacacttttgatgttatagtgttaact 5657624  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||    
T  5657625 tcactagaaaagtcattctcatgacttcaccatagaattttcc 5657667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 8861400 - 8861260
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||     ||| |||||||| ||| ||||||||||||    
T  8861400 tctgattaattgatgatactatggggacttaacttttgatgccactgtacaaacagtggggtgttat----tcataacacttttgatgctatagtgttaa 8861305  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||| | ||||||||||||||| ||| ||||||||||||||||||    
T  8861304 cttcgcgagaaaagtcattctcatgacttcaccatagaattttcc 8861260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 21991760 - 21991607
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| || |||||||||| ||||||||    ||||| ||||| ||| ||| |||    
T  21991760 tcttgttaatctgatgaattgatgatactatggggactgaacttttgatgacactgtacaaacagtggggtgt----tactcgcaacaattttgatgcta 21991665  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    ||||||||||||||||| |||| |||||||| ||| |||||| |||||||||||||||    
T  21991664 tagtgttaacttcaccataaaaatcattctcatgacttcaccctagaattttcctata 21991607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 43686164 - 43686012
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||| |||||||||  ||||| ||||||||||||||||||||||||| | ||||||    ||||||||||| ||| |||| ||    
T  43686164 tcttgttagtctgatgaattgttgatactatagggactgaacttttgatgccattgtacaaacagt-gggtgt----tactcacaacatttttgatatta 43686070  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    ||||||||||||||||  |||||||||| |||||| ||||||||||||||||||||||    
T  43686069 tagtgttaacttcacccaaaaagtcattttcgtgacttcaccatagaattttcctata 43686012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 12165876 - 12165727
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||    |||||||||||||||||||| |||||||||| |||||||||||    |||||||||||| ||| |||    
T  12165876 tcttgttaatctgatgaattgatgatacttaagggacttaacttttgatgccactgtacaaacagtggggtgttac----tcacaacactttggatgcta 12165781  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||||||||||||||||||| |   || |||||| |||||||||||    
T  12165780 tagtgttaacttcaccagaaaagtcattttaacgacttcaccgtagaattttcc 12165727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 32432576 - 32432430
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||  |||| ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |     |    
T  32432576 tcttgttagtctgatgaattgatgatactatggagactgaacttttgatgtcattgtacaaacaatggggtgt----tactcacaacatttttg-----a 32432486  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  32432485 tagtgttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttccta 32432430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 15612796 - 15612944
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| |||  ||||| |||||||||||||| | |||||||||||||||||    |||||| |||||||| |||  ||    
T  15612796 tcttgttaatctgatgaattgatgatattatagggactgaacttttgatgccactctacaaacactggggtgt----tactcataacacttt-gatgtta 15612890  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||| ||||| || |||||| ||| ||||||||||||||||||    
T  15612891 tagtgttaacttcacaagaaacgttattctcatgacttcaccatagaattttcc 15612944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 30055653 - 30055500
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||    |||  ||| ||| ||||     
T  30055653 agtcttgttaatctgatgaattaatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttac----tcattacaattttgatat 30055558  T
Q  103 tatagtgttaacttcaccagaaaa-gtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||| || |||| ||||||||  ||| |||||||||||||||||||    
T  30055557 tatagtgttaacttcatcaaaaaaagtcattcttatgacttcaccatagaattttcct 30055500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 41765112 - 41765265
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| |||||  |||||||||||||  ||||||||| |||||||     ||||||| ||||||| |||     
T  41765112 cagtcttgttaatctgatgaattgatgatactatgaggactggacttttgatgccaccgtacaaacagtggggtg----ctactcactacacttttgatg 41765207  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||| || |||| | |||||||||||||||| ||| |||||||| ||||||||||    
T  41765208 ctatagtattgactttatcagaaaagtcattctcatgacttcaccatggaattttcct 41765265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 32821088 - 32821240
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||| ||||    ||||||| ||| ||| |||      
T  32821088 agtcttgttaatctaatgaattgatgatactacgaggactgaacttttgatgccattgtacaaacagtggtgtgt----tactcactacatttttgatgt 32821183  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||| |||||||||||||| |||| ||||| || ||| |||||||||||||||||||    
T  32821184 tatattgttaacttcaccaaaaaaatcattttcatgacttcaccatagaattttcct 32821240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 26524375 - 26524514
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||| |||||||||||||||| |||||  ||||||||||||| || ||||||| ||| ||||||     |||||||| ||| |||  ||||||||||||     
T  26524375 tgataaattgatgatactatgaggactggacttttgatgccactgcacaaacaatggagtgttag----tcacaacatttttgatgttatagtgttaaca 26524470  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  26524471 tcaccagaaaagtcattctcatgacttcaccatagaattttcct 26524514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 34362205 - 34362334
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||||| | ||| |||||| ||||||| |||||||||| |||||||||||    |||||||||||| ||| |||||||||||||||  | |||    
T  34362205 tgatgatactatgagaactgaacttt-gatgccactgtacaaacagtggggtgttac----tcacaacacttttgatgctatagtgttaactttcctaga 34362299  T
Q  124 aaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||| | ||||||||||||||||||||    
T  34362300 aaagtcattctcataatttcaccatagaattttcc 34362334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 22687354 - 22687216
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||| || ||||||| ||| ||||    ||||||||||| ||| |||  |||||||||||    
T  22687354 tctgatgaattgatgatactatggggactgaacttttgataccactgcacaaacagtggagtgt----tactcacaacatttttgatgttatagtgttaa 22687259  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||| |||||||||||||||| ||| ||   ||||||||||||||    
T  22687258 cttcatcagaaaagtcattctcatgactt---catagaattttcct 22687216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 26980436 - 26980325
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||| |||| ||||| |||||||||||||| |||||||||  ||||||||    ||||||||||||||| ||| ||||| ||||||||    
T  26980436 tgatgaattgatgatattatggggactgaacttttgatgccactgtacaaaccgtggggtgt----tactcacaacacttttgatgctataatgttaact 26980341  T
Q  116 tcaccagaaaagtcat 131  Q
    |||||| |||||||||    
T  26980340 tcaccataaaagtcat 26980325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 24211855 - 24211717
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||||||||||||||||| || || |||||||||||||||| || ||||| | |||||||||    |||  ||| ||| |||  ||||||||||||    
T  24211855 ctgatgaattgatgatactatgagggctgaacttttgatgccattctataaacagtagggtgttac----tcattacatttttgatgttatagtgttaac 24211760  T
Q  115 ttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    ||||||| ||||||||||||  ||| |||||||||||||||||    
T  24211759 ttcaccaaaaaagtcattcttatgacttcaccatagaattttc 24211717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 6546643 - 6546494
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||   | | |||||||||||  | |||||||| | |||||||||||    || ||||||||| ||| |||    
T  6546643 tcttgttaatctgatgaattgatgatactatggatagtaaacttttgatgttactgtacaaatagtggggtgttac----tcgcaacacttttgatgcta 6546548  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||| |||||| |||||||  ||| ||||||||||||||||||    
T  6546547 tagtgttaacttcactagaaaaatcattcttatgacttcaccatagaattttcc 6546494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 18797453 - 18797303
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| |||||||||||||| ||| | ||||||||||| ||||||||||||| ||||||||    ||||||  ||| |||   ||     
T  18797453 agtcttgttaatctgatgagttgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacatttt--ttat 18797360  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
      ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  18797359 gttagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcct 18797303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 12390665 - 12390817
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||| |||||||| |||| |||||||||||| || || ||||||| |||| ||||||    |||  ||||||| |||      
T  12390665 agtcttgttaatctgatgaattgataatactatggggacataacttttgatgtcactgcacaaacagtgggatgttac----tcattacacttttgatgt 12390760  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||| |||||||  |||  ||| |||||||||||||||||||    
T  12390761 tatagtgttaacttcaccaaaaaagtcgatctgatgacttcaccatagaattttcct 12390817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 48928601 - 48928748
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||| |||||||| ||||| ||||||||||| ||  ||||||| | |||||||     ||||||| ||||||| |||  ||    
T  48928601 tcttgttaatctgatgaattgataatactatg-ggactgaacttttgatggcaccgtacaaatagtggggtg----ctactcactacacttttgatgtta 48928695  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||||| |||||||    
T  48928696 tagtgttgacttcaccagaaaagtcattctcatgacttcaccataaaattttc 48928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 33688299 - 33688446
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||   |||| |||||||||||||| || ||||||| | || |||    |||||| |||||||| |||  ||    
T  33688299 tcttgttaatctgatgaattgatgatactatagagactgaacttttgatgccactggacaaacagtaggatgt----tactcataacacttttgatgtta 33688394  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    |||||||||||| |||||||||||||||||| | | ||||||||| |||||||    
T  33688395 tagtgttaactt-accagaaaagtcattctcataacttcaccatataattttc 33688446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 8299250 - 8299192
Alignment:
Q  98 gatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  8299250 gatactatagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 8299192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 25691592 - 25691729
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||| |||||||  | ||| |||| ||||||||| |||||||||| || |||  |   ||||||||| ||||| |||  |||||||||||||    
T  25691592 tgatgaattgataatactataagaactgaactgttgatgccactgtacaaacagtgaggtaat---tactcacaatacttttgatgttatagtgttaact 25691688  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||| ||||||||||||||| ||| ||||||||| ||||||    
T  25691689 tcacgagaaaagtcattctcatgacttcaccataaaatttt 25691729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 27421417 - 27421563
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||| |||| |||||| |||  ||||| ||||||||||| ||||||||||||| ||| |||||||    |||||||||||| |||  ||    
T  27421417 tcttgttaatctgataaatttatgatattata-ggactgaacttttgatgtcattgtacaaacagtggagtgttac----tcacaacacttttgatgtta 27421511  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||||||||||||||| |||| ||||| ||  || ||||||||||||||||    
T  27421512 tagtgttaacttcaccaaaaaaatcattatcacgacttcaccatagaatttt 27421563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 37109998 - 37109847
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| |||   |||| ||||||||||| ||||||||||||  ||||||||    ||||||  ||| |||  ||      
T  37109998 agtcttgttaatctgatgaattgatgatattataatgactgaacttttgatgtcattgtacaaacggtggggtgt----tactcattacattttttatgt 37109903  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||||| |||||||||| |  ||| ||||||||||||||||||    
T  37109902 tatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcc 37109847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 23111316 - 23111167
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||| ||||||||||||||||| |  |  | ||||||||||||||||||||||| | ||| |||||||    |||||| | ||| |||      
T  23111316 agtcttgttaatctaatgaattgatgatactacgatggttgaacttttgatgccattgtacaaatagtggtgtgttac----tcacaatatttttgatgt 23111221  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||||||||||| ||||| || ||| ||||||| ||||||||    
T  23111220 tatagtgttaacttcaccagaaaaatcattttcatgacttcaccacagaatttt 23111167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 17842621 - 17842773
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| |||   |||| | ||||||||| ||||||||||||  |||||||||||    |||  ||| |||  ||      
T  17842621 agtcttgttaatctgatgaattgatgatattataatgactgagcttttgatgtcattgtacaaacggtggggtgttac----tcattacattttttatgt 17842716  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||| |||||||||| |  ||| |||||||||||||||||||    
T  17842717 tatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcct 17842773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 7334908 - 7334769
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    ||||||| |||||||||||||| | ||| ||||||||||| ||||||||||||| ||||||||    ||||||  |||  ||  ||  ||||||||||||    
T  7334908 ctgatgagttgatgatactatgagaactgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacatattttatgttatagtgttaac 7334813  T
Q  115 ttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||| || |||||||||||||  || |||||| |||||||||||    
T  7334812 ttcatcaaaaaagtcattctcacgacttcaccgtagaattttcc 7334769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 27283870 - 27283719
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||| ||||||| |||||||| ||||| ||||||||||  ||||||||||||  ||||||||    ||||||  ||| ||| |||      
T  27283870 agtcttgttaatctgataaattgataatactatgaggactgaacttttgatttcattgtacaaacggtggggtgt----tactcattacatttttgatgt 27283775  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||||| |||| ||||| |  | | ||||||||||||||||||    
T  27283774 tatagtgttaacttcaccaaaaaaatcatttttataacttcaccatagaattttcc 27283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 38258672 - 38258521
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| ||| | ||||||||||| ||||||||||||  || |||||    ||||||  ||| |||  ||     
T  38258672 cagtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgtcattgtacaaacggtgtggtgt----tactcattacattttttatg 38258577  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
     ||||||||||||||||||| |||| ||||| |  ||| |||||| ||||||||||    
T  38258576 ttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccgtagaattttc 38258521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 31579099 - 31579257
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgta-----caaacactggggtgttacgtactcacaacactttc 97  Q
    |||||| ||| |||||||||||||||||||||||  |||| ||||||||||| |||||||      ||||| ||||||||    ||||||  ||| |||     
T  31579099 agtcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcattgtataaattaaacagtggggtgt----tactcattacattttt 31579194  T
Q  98 gatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||  ||||||||||||||||||| |||| | |||||  ||| ||||||||||||||||||||    
T  31579195 gatgttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaattttccta 31579257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 48928334 - 48928459
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||| |||||||| ||||| ||||||||||| ||  ||||||| | |||||||     ||||||| ||||||| |||  ||    
T  48928334 tcttgttaatctgatgaattgataatactatg-ggactgaacttttgatggcaccgtacaaatagtggggtg----ctactcactacacttttgatgtta 48928428  T
Q  105 tagtgttaacttcaccagaaaagtcattctc 135  Q
    ||||||| |||||||||||||||||||||||    
T  48928429 tagtgttgacttcaccagaaaagtcattctc 48928459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 37347130 - 37346997
Alignment:
Q  21 aattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcacc 120  Q
    |||||||||||||||| ||||| ||||||||||| || |||||||||| ||||||||    ||||||  | | ||| |||  |||||| |||||||||||    
T  37347130 aattgatgatactatgaggactgaacttttgatgtcactgtacaaacaatggggtgt----tactcattatatttttgatggtatagtattaacttcacc 37347035  T
Q  121 agaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    | |||| ||||| || ||| ||||||||| ||||||||    
T  37347034 aaaaaaatcattttcatgacttcaccataaaattttcc 37346997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 31520774 - 31520909
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||||| ||||| ||||||||||| || |||||||||| ||| ||||    ||||||| | | ||| |||  |||||| ||||||||    
T  31520774 atgaattgatgatactatg-ggactgaacttttgatgtcactgtacaaacaatggagtgt----tactcactatatttttgatggtatagtattaacttc 31520868  T
Q  118 accagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||| |||||||||| || ||| |||| |||| ||||||||    
T  31520869 accaaaaaagtcattttcatgacttcatcataaaattttcc 31520909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 9355861 - 9356013
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||| | |||| |||| | ||| ||||||||||| || |||||||||| |||||| || |    |||| ||| |||  || |    
T  9355861 agtcttgttaatctgatgaattaacgataatatgagaactaaacttttgatgtcactgtacaaacagtggggtattgc----tcactacattttttatgc 9355956  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||| ||||||| ||  ||||||||| ||| ||||||||| |||||||||    
T  9355957 tatagtgttaaattcaccaaaatggtcattctcatgacttcaccataaaattttcct 9356013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 35353236 - 35353120
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggac-ttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgat 100  Q
    ||||||| ||| |||||||||||| |||||||||| ||||   |||||||||| |||| ||||||||| |||||||     ||||||| ||||||| |||    
T  35353236 cagtcttgttaatctgatgaattggtgatactatggggacagaaacttttgattccatcgtacaaacaatggggtg----ctactcactacacttttgat 35353141  T
Q  101 actatagtgttaacttcacca 121  Q
     |||||||||| |||||||||    
T  35353140 gctatagtgttgacttcacca 35353120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 11071321 - 11071255
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||||||||| | ||| ||||||||||| || |||||||||| ||| |||||||    
T  11071321 tctgatgaattgatgatactatgagaactgaacttttgatgtcactgtacaaacagtggagtgttac 11071255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 23402371 - 23402419
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  23402371 ttaacttcaccagaaaagtcattctcatgacttcgccatagaattttcc 23402419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 10359261 - 10359400
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||||||||||||||  | ||| ||||||||||| || |||| ||| | | || ||||||    |||| ||||||| ||| |||||   ||||    
T  10359261 tctgatgaattgatgatactatcag-actgaacttttgatgtcactgtataaatagtaggatgttac----tcactacacttttgatgctataagattaa 10359355  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
     || ||||||||||||||| || ||| ||||||||||||||||||    
T  10359356 ttttaccagaaaagtcattatcatgacttcaccatagaattttcc 10359400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 10481731 - 10481660
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactgggg 74  Q
    |||||| ||| ||||||||||||||||||||||   |||| || |||||||| ||||||||||||| |||||    
T  10481731 agtcttgttaatctgatgaattgatgatactataaagactgaatttttgatgtcattgtacaaacagtgggg 10481660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 3953779 - 3953733
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||||||||||||| ||| |||| |||||||||||    
T  3953779 ttaacttcaccagaaaagtcattctcatgacttcatcatagaatttt 3953733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 241024 - 241073
Alignment:
Q  113 acttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    ||||||||| |||||||||| || ||| ||||||||||||||||||||||    
T  241024 acttcaccaaaaaagtcattttcatgacttcaccatagaattttcctata 241073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 40381988 - 40381939
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||||||||| | | |||||| ||||||||||||    
T  40381988 ttaacttcaccagaaaagtcattctcataacttcaccgtagaattttcct 40381939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 22955312 - 22955364
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    |||||||||||||||||||||||||| | | ||||||||||  ||||||||||    
T  22955312 ttaacttcaccagaaaagtcattctcattacttcaccatagttttttcctata 22955364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 34362149 - 34362195
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgt 61  Q
    |||||||||||||||||||||  | ||| ||||||||||||||||||    
T  34362149 ctgatgaattgatgatactataagaactgaacttttgatgccattgt 34362195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 43925208 - 43925167
Alignment:
Q  23 ttgatgatactatgtggacttaacttttgatgccattgtaca 64  Q
    ||||||||||||||| |||| ||||||||||| |||||||||    
T  43925208 ttgatgatactatgtagactgaacttttgatgtcattgtaca 43925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 44413427 - 44413491
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||| |||||||||  |||  ||||||||||  || |||||||||| |||||||||||    
T  44413427 tgatgaattgaagatactatggagaccgaacttttgatttcagtgtacaaacattggggtgttac 44413491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 3879974 - 3880125
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||| | ||||||||||| ||||||||||||| | |||||||||    |||||||||||| |||||||    
T  3879974 tcttgttagtctgatgaattgatgatactatggggattgaacttttgatgtcattgtacaaacagtagggtgttac----tcacaacacttttgatacta 3880069  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    || |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3880070 taatgttaacttcaccagaaaagtcattctcgtgacttcaccatagaattttccta 3880125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 8513371 - 8513232
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||| |||| ||||| ||||||||||| || |||||||||| |||||||||||    |||||||||||| |||| |||||||||||||    
T  8513371 tgatgaattgatgatattatggggactgaacttttgatgtcactgtacaaacagtggggtgttac----tcacaacacttttgatattatagtgttaact 8513276  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  8513275 tcaccagaaaagtcattctcatgacttcaccatagaattttcct 8513232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 6089057 - 6088910
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||  |||| |||||||||||||| | |||||||| ||||| |||||    |||||||||||| |||||||    
T  6089057 tcttgttaatctgatgaattgatgatactatggtgactgaacttttgatgccactttacaaacagtggggcgttac----tcacaacacttttgatacta 6088962  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  6088961 tagtgttaacttcaccagaaaaatcattctcatgacttcaccatagaatttt 6088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 21017147 - 21017294
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||    ||||||||||| |||  ||||||    
T  21017147 tcttgttagtctgatgaattgatgatactatggggactgaacttttgatgccattgtacaaataatggggtgt----tactcacaacattttttatacta 21017242  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
     | |||||||||||||| |||||||||| |||||| |||||| || ||||||    
T  21017243 caatgttaacttcaccaaaaaagtcattttcgtgacttcaccgtataatttt 21017294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 4318858 - 4319008
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||| ||||||||||||||||||| ||  | ||||||||||| || |||||||||| |||||||||||    ||| |||||||| |||  ||    
T  4318858 tcttgttaatctaatgaattgatgatactatgggggttgaacttttgatgtcactgtacaaacagtggggtgttac----tcataacacttttgatgtta 4318953  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  4318954 tagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcct 4319008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 15491764 - 15491638
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| || || |||||||||||||| |||||||| | ||||||||    ||||||||||||||| |||  ||    
T  15491764 tcttgttaatctgatgaattgatgatactatgagggctgaacttttgatgccactgtacaaatagtggggtgt----tactcacaacacttttgatgtta 15491669  T
Q  105 tagtgttaacttcaccagaaaagtcattctc 135  Q
     | |||||||||||| |||||||||||||||    
T  15491668 caatgttaacttcacgagaaaagtcattctc 15491638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 7235067 - 7235218
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| |||||||||||||| ||||||||  |||| ||||||||||| ||  ||||||||| |||||||     ||||||| ||||||| |||     
T  7235067 cagtcttgttaatctgatgaattgataatactatg-agactgaacttttgatggcaccgtacaaacagtggggtg----ctactcactacacttttgatg 7235161  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
     ||||||||| |||||||| |||||||||||||| | | ||||||||||||||||||    
T  7235162 ttatagtgttgacttcaccggaaaagtcattctcataacttcaccatagaattttcc 7235218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 20768233 - 20768087
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||| ||||||||||| ||||| |||||||||||||| |  ||||||| |||     | | ||||||| ||||||| ||| |||    
T  20768233 tcttgttaatctgatgaattaatgatactatgaggactgaacttttgatgccacta-acaaacaatgga----tgc-tactcactacacttttgatgcta 20768140  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||    
T  20768139 tagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaattttc 20768087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 30353404 - 30353540
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||||||||  |||| |||| | ||||||| |||||||||| || | | ||||    || ||||||||| |||  |||| ||||||||    
T  30353404 tgatgaattgatgatactatggagactgaactatcgatgccactgtacaaacagtgagatattac----tcgcaacacttttgatgttataatgttaact 30353499  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  30353500 tcaccagaaaagtcattctcatgacttcaccatagaatttt 30353540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 29182312 - 29182165
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| ||||  |||| ||||||||||| || |||| ||||| ||||||||    ||||||||||||||| |||  ||    
T  29182312 tcttattaatctgatgaattgatgataatatggagactgaacttttgatgacactgtataaacagtggggtgt----tactcacaacacttttgatgtta 29182217  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||| ||  ||| |||||||| ||| ||||||||| ||||||    
T  29182216 tagtgttaacttcatcaataaaatcattctcatgacttcaccataaaatttt 29182165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 18498565 - 18498432
Alignment:
Q  23 ttgatgatactatgtggacttaacttttgatgccattgtacaaacactgggg-tgttacgtactcacaacactttcgatactatagtgttaacttcacca 121  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||  ||||| |||| |    |||| ||||||| ||| ||||| ||||||||||||||    
T  18498565 ttgatgatactatgaggactgaacttttgatgccactgtacaaactgtgggggtgttgc----tcactacacttttgatgctataatgttaacttcacca 18498470  T
Q  122 gaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    | |||||||||||| ||| ||||| ||||| |||||||    
T  18498469 ggaaagtcattctcatgacttcactatagatttttcct 18498432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 33618986 - 33618834
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| | ||| ||||||||||||||  ||||||| | |||| ||     ||||||| ||||||| |||     
T  33618986 cagtcttgttaatctgatgaattgatgatactatgagaactgaacttttgatgccaccgtacaaataatgggttg----ctactcactacacttttgatg 33618891  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    | |||||||| ||||||||||||||||  ||| | ||| |||||| |||||||||||    
T  33618890 cgatagtgttgacttcaccagaaaagtatttcccatgacttcaccgtagaattttcc 33618834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 33893038 - 33893186
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||||| ||||||| ||  ||||||||||| | |||||||||||    |||||||||||| |||  ||    
T  33893038 tcttgttaatctgatgaattgatgatactaag-ggactgaacttttaatatcattgtacaaatagtggggtgttac----tcacaacacttttgatgtta 33893132  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||| | |||| | |||||  ||| || |||||||||||||||    
T  33893133 tagtgttaacttcactaaaaaaattattctaatgactttaccatagaattttcc 33893186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 1945972 - 1945832
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||| ||||||||||| || || ||||||||||| |||| |||||||| ||||||||    ||||||  ||| ||| |||  |||||||||||||    
T  1945972 tgatgaattcatgatactatgagggctgaacttttgatgtcattctacaaacagtggggtgt----tactcattacatttttgatgttatagtgttaact 1945877  T
Q  116 tcacc-agaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||| | ||||||||||||  ||| |||||| ||||||||||||    
T  1945876 tcaccaaaaaaagtcattcttatgacttcaccgtagaattttcct 1945832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 5627530 - 5627390
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    ||||||||||||| |||||||| || || ||||||||||| |||| |||||| | |||||||||||    |||  | | |||  ||  ||||||||||||    
T  5627530 ctgatgaattgataatactatgagggctgaacttttgatgtcattctacaaatagtggggtgttac----tcattatattttttatgttatagtgttaac 5627435  T
Q  115 ttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||| ||||||||||||  ||| |||||| ||||||||||||    
T  5627434 ttcaccaaaaaagtcattcttatgacttcaccttagaattttcct 5627390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 19631797 - 19631748
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  19631797 ttaacttcaccagaaaagtcattcttatgacttcaccatagaattttcct 19631748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 7055260 - 7055401
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||||||||||||||||| || || ||||||||||| |||| |||||| | || |||||    |||| |  | | |||  ||  ||||||||||||    
T  7055260 ctgatgaattgatgatactatgagggctgaacttttgatgtcattctacaaatagtgaggtgt----tactaattatattttttatgttatagtgttaac 7055355  T
Q  115 ttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||||| |||| |||||||  ||| ||||||||| ||||||||||    
T  7055356 ttcaccaaaaaaatcattcttatgacttcaccataaaattttccta 7055401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 6091231 - 6091293
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||| | | ||| ||||||||||| ||||||||||||| ||| |||||||    
T  6091231 atgaattgatgatactacgagtactgaacttttgatggcattgtacaaacaatggtgtgttac 6091293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 6614036 - 6614082
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||    
T  6614036 ttaacttcaccagaaaagtcattcttatgatttcaccatataatttt 6614082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 11084152 - 11084201
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||| ||||||||||| ||| || ||| |||||||||||||||||||    
T  11084152 ttaactttaccagaaaagttattttcatgacttcaccatagaattttcct 11084201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 24662189 - 24662238
Alignment:
Q  109 gttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||| |||||||||||| || ||| || |||||||||||||||    
T  24662189 gttaacttcactagaaaagtcattatcatgactttaccatagaattttcc 24662238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 91; Significance: 4e-44; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 283 - 132
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||    |||||||| |||  ||||||    
T  283 tcttgttagtctgatgaattgatgatactatgaggactgaacttttgatgccattgtacaaacagtggagtgttac----tcacaacattttttatacta 188  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
     ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  187 cagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttccta 132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 94417 - 94542
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||| |||||||||||||| |||| ||||  |||||||||||||| |||||||||| ||||||||    ||||||| ||| ||| |||      
T  94417 agtcttgttaatctcatgaattgatgatagtatggggaccaaacttttgatgccactgtacaaacagtggggtgt----tactcactacaattttgatgt 94512  T
Q  103 tatagtgttaacttcaccagaaaagtcatt 132  Q
    |||| ||||||||||| |||||||||||||    
T  94513 tataatgttaacttcatcagaaaagtcatt 94542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 408702 - 408755
Alignment:
Q  106 agtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||| |||| ||||| |  ||| |||||||||||||||||||    
T  408702 agtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattttcct 408755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 408463 - 408526
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaac 67  Q
    |||||| ||| ||||||||||||||||||||| | ||||| ||||||||||  |||| |||||||    
T  408463 agtcttgttaatctgatgaattgatgatacta-gaggactgaacttttgatttcattttacaaac 408526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 36695008 - 36695158
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |||| ||    
T  36695008 tcttcttagtctgatgaattgatgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacatttttgatatta 36695103  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||| ||||||||||||| || ||| |||||||||||||||||||    
T  36695104 tagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaattttcct 36695158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 158
Target Start/End: Complemental strand, 12876256 - 12876108
Alignment:
Q  6 cttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactat 105  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| | ||||||    ||||||||||| |||  ||| |||    
T  12876256 cttcttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagttgggtgt----tactcacaacattttttatattat 12876161  T
Q  106 agtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||| ||||||||||||| |||||| || |||||||||||||||    
T  12876160 agtgttaacttcatcagaaaagtcattttcgtgacttaaccatagaattttcc 12876108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 9864296 - 9864146
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |||||||    
T  9864296 tcttattagtctgatgaattgatgatattatggggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacatttttgatacta 9864201  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||| ||||||| |||||||||| |||||| ||||  |||||||||||||    
T  9864200 tagtgttaatttcaccaaaaaagtcattttcgtgacttcattatagaattttcct 9864146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 38644126 - 38643976
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||  |||| |||||||||||||| |  ||||||| |||||||||||    |||||||||||| |||  ||    
T  38644126 tcttgttaatctgatgaattgatgatactatggagactgaacttttgatgccactagacaaacagtggggtgttac----tcacaacacttttgatgtta 38644031  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  38644030 tagtgttaacttgaccaaaaaagtcattctcatgatttcaccatagaattttcct 38643976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 27082878 - 27083031
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | ||||||||||||||||||||| ||||| ||||||| |||||| || ||||||| |||||||||||    |||| ||||||| ||| |    
T  27082878 agtcttgttaatttgatgaattgatgatactatgaggactgaacttttaatgccactgcacaaacagtggggtgttac----tcactacacttttgatgc 27082973  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||||||||||||||||||||||||| |||  ||| ||||||||||||||||||||    
T  27082974 tatagtgttaacttcaccagaaaagtcagtctgatgacttcaccatagaattttccta 27083031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 16446915 - 16447068
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| |||| ||||| |||||||||||||||| |||||||| ||||||||    ||||||| ||| ||| |||      
T  16446915 agtcttgttaatctgatgaattgatgatagtatggggactaaacttttgatgccattatacaaacagtggggtgt----tactcactacaattttgatgt 16447010  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||||||||||| | ||||||||||||| || ||| ||||||||||||||||||||    
T  16447011 tatagtgttaactttatcagaaaagtcattttcatgacttcaccatagaattttccta 16447068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 13307762 - 13307622
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| | || ||||||||    |||||||||||| |||  |||||||||||    
T  13307762 tctgatgaattgataatactatggggactgaacttttgatgtcactgtacaaatagtgaggtgttac----tcacaacacttttgatgttatagtgttaa 13307667  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||    
T  13307666 cttcaccagaaaaatcattctcatgacttcaccatagaattttcc 13307622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 5299988 - 5300137
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||  ||||| |||||||||||||| |||||||||| | | ||| ||| |||    |||||||| ||| |||    
T  5299988 tcttgttaatctgatgaattgatgatactataaggactgaacttttgatgccactgtacaaacagtagagtgctacttac----aacacttttgatgcta 5300083  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||  | ||||||||||||| ||| ||||||||||||||||||    
T  5300084 tagtgttaacttcattaaaaaagtcattctcatgacttcaccatagaattttcc 5300137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 465990 - 465843
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||||| || ||||||||||| |||||||||| ||||||||    ||||||||||||||| |||  ||    
T  465990 tcttgttaatctgatgaattgatgatactaaggggactgaatttttgatgccactgtacaaacagtggggtgt----tactcacaacacttttgatgtta 465895  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    | ||||||||||||||| |||||||||| |  ||| ||||||||| ||||||    
T  465894 tcgtgttaacttcaccacaaaagtcattttaatgacttcaccataaaatttt 465843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 6098558 - 6098709
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||| ||||||||| ||||| ||||||||||| || |||||||||| |||||||||||    |||| | | ||| ||| |    
T  6098558 agtcttgttaatctgatgaattgacgatactatggggactgaacttttgatgtcactgtacaaacagtggggtgttac----tcactatatttttgatgc 6098653  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||| |||||||||||| |||||| ||| || ||| ||||||||||||||||||    
T  6098654 tatagtattaacttcaccaaaaaagttattttcatgacttcaccatagaattttcc 6098709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 10555242 - 10555393
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||| | ||||||||||| ||||||||||||| ||| ||||    ||||||  ||| |||  ||      
T  10555242 agtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggagtgt----tactcattacattttttatgt 10555337  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||||    
T  10555338 tatagtgttaacttcaccaaaaaagtcattctcatgacttcaccgtagaattttcc 10555393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 40862551 - 40862417
Alignment:
Q  21 aattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttc-gatactatagtgttaacttcac 119  Q
    |||||||||||| ||| | ||| ||||||||||||||||||||||||| |||||||||||    |||||||| |||  |||| |||||||||||||||||    
T  40862551 aattgatgataccatgag-actgaacttttgatgccattgtacaaacagtggggtgttac----tcacaacattttttgatattatagtgttaacttcac 40862457  T
Q  120 cagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||| ||| |||||| ||||| |||||||||||||    
T  40862456 cagaaaagttattttcgtgacttcactatagaattttcct 40862417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 37970574 - 37970704
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||||| || || ||||||||||| ||||||||||||| ||||||||    ||||||  ||| ||| |||  |||||||||||||||    
T  37970574 atgaattgatgatactatgagggctgaacttttgatggcattgtacaaacagtggggtgt----tactcattacatttttgatgttatagtgttaacttc 37970669  T
Q  118 accagaaaagtcattctcgtgatttcaccatagaa 152  Q
    |||| ||||||||||||| ||| ||||||||||||    
T  37970670 accaaaaaagtcattctcatgacttcaccatagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 16223013 - 16222861
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| || |||||||||||||||||||| ||||| ||||||||||| ||||||||||||  |||||    |  ||||||| | | |||  ||      
T  16223013 agtcttgttaatcggatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaactgtgggg----aactactcactatattttttatgt 16222918  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  16222917 tatagtgttaaattcaccagaaaagtcattctcatgatttcaccgtagaattttcct 16222861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 34895117 - 34894965
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| ||||  |||| |||||||||||||| | |||||||| ||| |||||||    |||| ||| | | |||      
T  34895117 agtcttgttaatctgatgaattgatgatagtatgatgactgaacttttgatgccactttacaaacagtggagtgttac----tcactacagtgttgatgt 34895022  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||| ||||||||||||| || ||| |||||||||||||||||||    
T  34895021 tatagtgttaacttcatcagaaaagtcattttcatgacttcaccatagaattttcct 34894965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 1205064 - 1204925
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||| ||  |||||||    |||| ||| |||  ||  |||||||||||||    
T  1205064 tgatgaactgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgatgtgttac----tcactacattttttatgttatagtgttaact 1204969  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||| ||| |||||| || |||||||||    
T  1204968 tcaccagaaaagtcattctcatgacttcaccgtaaaattttcct 1204925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 1150145 - 1150298
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||||||||  |||| ||||||||||| | ||||||||||| |||| |||    ||||||  ||| ||| |||      
T  1150145 agtcttgttaatctgatgagttgatgatactatgatgactgaacttttgatgtcgttgtacaaacagtgggatgt----tactcattacatttttgatgt 1150240  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||| ||||||||||||| ||||||||||||  ||| ||||||||||||||||||||    
T  1150241 tatagcgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttccta 1150298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 34952084 - 34952225
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||||||   ||||| ||||||||||| || |||||||||| |||| ||||||    |||||||||||| |||  |||||||||||||    
T  34952084 tgatgaattgatgatactaaagggactgaacttttgatgtcactgtacaaacagtgggctgttac----tcacaacacttttgatgatatagtgttaact 34952179  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
    | ||||||||||||||| |  ||| || || |||||||||||||||    
T  34952180 tgaccagaaaagtcattttaatgactttactatagaattttcctat 34952225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 33906299 - 33906223
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||| |||||||  ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||    
T  33906299 tactcactacacttttaatactatagtgttgacttcaccagaaaagtcattctcataatttcaccatagaattttcc 33906223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 43643635 - 43643787
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||||||||  || | |||||| |||| ||||||||||||| | | |||||||    |||  ||| ||| |||      
T  43643635 agtcttgttaatctgatgagttgatgatactatgaagattgaactttggatgtcattgtacaaacagtagagtgttac----tcattacatttttgatgt 43643730  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||| || |||||||||| ||| |||||||||||||||||||    
T  43643731 tatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcct 43643787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 11727161 - 11727046
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||| |||| ||||| |||||||||||||| | |||||| | ||||||||    |||| |||||||||| |||  |||||||||||||    
T  11727161 tgatgaattgatgatattatgaggactgaacttttgatgccactatacaaatagtggggtgt----tacttacaacacttttgatgttatagtgttaact 11727066  T
Q  116 tcaccagaaaagtcattctc 135  Q
    |||||| |||| ||||||||    
T  11727065 tcaccaaaaaaatcattctc 11727046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 23854486 - 23854622
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    |||| |||||||||||||| ||||| ||||||||||| ||||| ||||||| | |||||||||    |||  ||| |||  ||  |||||||||||||||    
T  23854486 atgagttgatgatactatgaggactgaacttttgatgtcattgcacaaacagttgggtgttac----tcattacattttttatgttatagtgttaacttc 23854581  T
Q  118 accagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||| ||||||||||||| ||| |||||| |||| ||||||    
T  23854582 accaaaaaagtcattctcatgacttcaccgtagacttttcc 23854622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 41362665 - 41362517
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| || || ||||||||||| || | |||||| | ||||||||    ||||||| ||| |||   ||     
T  41362665 agtcttgttaatctgatgaattgatgatactatgaggtctgaacttttgatgtcactatacaaatagtggggtgt----tactcactacatttt---tat 41362573  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
      ||||||||||||||||| |||||||||| || | | ||||||||||||||||||    
T  41362572 gctagtgttaacttcaccaaaaaagtcattttcataacttcaccatagaattttcc 41362517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 43025850 - 43025733
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| |||||||||||||||||| ||| || ||| ||||||| || |||||||||||| | |||||| |    || |||||||||||| |||||||    
T  43025850 tcttcttagtctgatgaattgatgatattatatgaactgaacttttaataccattgtacaaagagtggggtat----taatcacaacacttttgatacta 43025755  T
Q  105 tagtgttaacttcaccagaaaa 126  Q
    ||  ||||||||||||| ||||    
T  43025754 tatcgttaacttcaccataaaa 43025733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 1149672 - 1149749
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| |||||||| |||||||||||||| ||||  ||||||||||| ||||||||||||| |||| ||||||    
T  1149672 agtcttgttaatctgatgagttgatgatactatgaggacagaacttttgatgtcattgtacaaacagtgggttgttac 1149749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 7890997 - 7891137
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| |||| ||||  ||||||||||||||||||||||||  ||| |||||             | ||| |||      
T  7890997 agtcttgttaatctgatgaattgatgatattatgaggaccgaacttttgatgccattgtacaaacggtggagtgtt-------------atttttgatgt 7891083  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||||||||||||||| | ||||||||||||| ||| ||||||||||||||||    
T  7891084 tatagtgttaacttcacaaaaaaagtcattctcatgacttcaccatagaatttt 7891137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 15009296 - 15009241
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||||| ||||||||||||  ||| ||||||||||||||||||    
T  15009296 tatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 15009241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 24823394 - 24823464
Alignment:
Q  89 aacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||||| | | || ||||||| ||||||||    
T  24823394 aacacttttgatattatagtgttaacttcaccaaaaaagtcattctcataactttaccatagtattttcct 24823464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 39099170 - 39099236
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||| ||||||||| ||||| |||||||||||| | |||||||| | |||||||||||    
T  39099170 tctgatgaattgacgatactatgaggactgaacttttgatgctagtgtacaaagagtggggtgttac 39099236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 30654635 - 30654777
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||| |||||||||||||  | || ||||||||||| ||||  ||||||| |||||||||||    |||  ||| |||  ||  ||||||||||||    
T  30654635 ctgatgaagtgatgatactatgaaggctgaacttttgatgtcattcaacaaacagtggggtgttac----tcattacattttttatgttatagtgttaac 30654730  T
Q  115 ttcaccagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
    ||||||| |||| ||| |||  ||| ||||||||| |||||||||||    
T  30654731 ttcaccaaaaaaatcactcttatgacttcaccataaaattttcctat 30654777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 31933926 - 31934076
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| || |||||||||||||||||||   |||| ||||||||||| ||||||| ||| | ||||||||    ||||||  | | ||| ||||     
T  31933926 agtcttgttaatcggatgaattgatgatactataatgactgaacttttgatgtcattgtataaagagtggggtgt----tactcattatatttttgatat 31934021  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
     |||||||||||||||||| |||| |||||||| | | |||||  ||||||||||    
T  31934022 catagtgttaacttcaccaaaaaaatcattctcataacttcacgttagaattttc 31934076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 7998402 - 7998359
Alignment:
Q  118 accagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  7998402 accagaaaagtcattctcatgacttcaccatagaattttcctat 7998359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 6446709 - 6446752
Alignment:
Q  113 acttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||||||| || ||| ||||||||||||||||    
T  6446709 acttcaccagaaaagtcattatcatgacttcaccatagaatttt 6446752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 159
Target Start/End: Original strand, 39099262 - 39099301
Alignment:
Q  120 cagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  39099262 cagaaaagtcattctcatgacttcaccatagaattttcct 39099301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 44869550 - 44869495
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||||| |||||| |||||  | |||||||| |||||||||||    
T  44869550 tatagtgttaacttcaccaaaaaagttattcttataatttcaccgtagaattttcc 44869495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 33197957 - 33197891
Alignment:
Q  92 actttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||| ||| ||||||| ||||||| | ||||||| | |||||| ||| ||||||||||||||||||    
T  33197957 acttttgatgctatagtattaacttaatcagaaaaattattctcatgacttcaccatagaattttcc 33197891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 35459834 - 35459888
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    |||||| ||||||| || | ||||||||||||| ||| |||||||||||||||||    
T  35459834 tatagtattaactttacgaaaaaagtcattctcatgacttcaccatagaattttc 35459888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 35735984 - 35736030
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||||    
T  35735984 ttaacttcaccaaaaaagtcattctaatgacttcaccatagaatttt 35736030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 41911030 - 41911080
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgc 55  Q
    |||| ||| |||||||||||||||||||||||| |||| || |||||||||    
T  41911030 tcttgttaatctgatgaattgatgatactatgttgactgaatttttgatgc 41911080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 4133146 - 4133199
Alignment:
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||| ||||||||||||  ||| || |||||| ||||||||    
T  4133146 tagtgttaacttcaccaaaaaagtcattctgatgacttgaccataaaattttcc 4133199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 28220955 - 28221003
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||||||||| || ||| || | |||||||||||||    
T  28220955 ttaacttcaccagaaaagtcattttcatgactttatcatagaattttcc 28221003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 44869636 - 44869576
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactgggg 74  Q
    |||||| ||||||||||||||||  || | ||||||||||| |||||| |||||| |||||    
T  44869636 tctgataaattgatgatactatgacgattgaacttttgatgtcattgtgcaaacagtgggg 44869576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 4167071 - 4166921
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||    |||||| | ||| |||||||    
T  4167071 tcttgttagtctgatgaattgttgatactatggggactgaacttttgatgccattgtacaaacagtggggtgttac----tcacaatatttttgatacta 4166976  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    || ||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  4166975 taatgttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcct 4166921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 13711613 - 13711465
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||| ||||||||| ||||||||||| || |||||||||  |||||||||||    |||||||||||| ||| |||    
T  13711613 tcttgttaatctgatgaattgatgataccatgtggactaaacttttgatgtcactgtacaaactgtggggtgttac----tcacaacacttttgatgcta 13711518  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    || |||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  13711517 taatgttaacttcaccagaaaagtcattctgatgacttcaccatagaattttc 13711465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 19424682 - 19424833
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| | || ||||| |||||||||||    |||||||||||| |||  ||    
T  19424682 tcttgttaatctgatgaattgatgatactatgaggactaaacttttgatgccactatataaacaatggggtgttac----tcacaacacttttgatgtta 19424777  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  19424778 tagtgttaacttcaccagaaaagccattctcatgacttcaccataaaattttccta 19424833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 4264131 - 4264286
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| | |||||||||||| ||||||||  |||| ||||||||||| || |||||||||| |||| ||||||    |||||||||||| ||| |||    
T  4264131 tcttcttaatatgatgaattgataatactatggagactgaacttttgatgtcactgtacaaacagtgggatgttac----tcacaacacttttgatgcta 4264226  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctatagt 164  Q
    |||||||||||| ||||||||||||||| |  ||| ||||||||||||||||||||||||    
T  4264227 tagtgttaactttaccagaaaagtcattatgatgacttcaccatagaattttcctatagt 4264286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 39167417 - 39167567
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||    ||||||||| ||||| |||||||    
T  39167417 tcttgttactctaatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgaggtgt----tactcacaatacttttgatacta 39167512  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |  ||||||||||| || |||| |||||||||||| ||||||||| |||||||||    
T  39167513 ttctgttaacttcatcaaaaaaatcattctcgtgacttcaccataaaattttcct 39167567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 36642124 - 36641988
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||||| ||||||||||| || |||||||||| || ||||||||    || ||||||||| ||| ||||||| |||| |    
T  36642124 tgatgaattgatgatactatgaggactgaacttttgatgtcactgtacaaacagtgaggtgttac----tcgcaacacttttgatgctatagtattaatt 36642029  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  36642028 tcaccagaaaagtcattctcatgacttcaccatagaatttt 36641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 3177088 - 3176941
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| | | ||||    |||||| |||| ||| |||| ||    
T  3177088 tcttcttagtctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagttgcgtgt----tactcaaaacatttttgatatta 3176993  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||| ||||||||| ||||||||||||| |||| | ||||||||||||||||    
T  3176992 tagtattaacttcatcagaaaagtcattttcgtaacttcaccatagaatttt 3176941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 33551038 - 33551189
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||||||||  |||  ||||||||||| ||||||||||||| ||||||||    ||||||| ||| ||| |||      
T  33551038 agtcttgttaatctgatgaattgatgatactatgaagaccgaacttttgatgtcattgtacaaacagtggggtgt----tactcactacatttttgatgt 33551133  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||| | ||||||||||||| ||| |||||| |||||||||||    
T  33551134 tatagtgttaacttcactaaaaaagtcattctcatgacttcaccgtagaattttcc 33551189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 41463915 - 41464051
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||| | |||||||||||||| |||||||||| || |||||    ||||||||||||||| |||  |||||| ||||||    
T  41463915 tgatgaattgatgatactatgaggattgaacttttgatgccactgtacaaacagtgaggtgt----tactcacaacacttttgattttatagtattaact 41464010  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||| ||| |||||||||  || ||||||||||||||||    
T  41464011 tcaccaaaaatgtcattctcacgacttcaccatagaatttt 41464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 43770893 - 43771039
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| || | ||||| |||||||||||||| |||| ||||| ||||||||    ||||||||||||||| |||  ||    
T  43770893 tcttgttaatctgatgaattgatgatattaaggggactgaacttttgatgccactgtataaacagtggggtgt----tactcacaacacttttgatgtta 43770988  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||||||||||||||| |||| |||||||  ||| ||||||||||||||||    
T  43770989 tagtgttaacttcacca-aaaaatcattctaatgacttcaccatagaatttt 43771039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 4478518 - 4478368
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||| ||||    ||||||||||||||| |||  ||    
T  4478518 tcttgttaatctgatgaattgatgatactatgaggactaaacttttgatgccactgtacaaacaatggagtgt----tactcacaacacttttgatgtta 4478423  T
Q  105 tagtgttaacttcaccagaaaagtcattctc-gtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||| |||  ||||| ||  ||| ||||| ||||||||||||    
T  4478422 tagtgttaacttcaccaaaaatatcattttctatgacttcactatagaattttcc 4478368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 33660435 - 33660569
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||| | ||||| |||||||||||||| |||||||||| | ||||||    ||||||||||||||| |||  ||||||||||||||     
T  33660435 atgaattgatgatactaagaggactgaacttttgatgccactgtacaaacagttgggtgt----tactcacaacacttttgatgttatagtgttaactta 33660530  T
Q  118 accagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    || |||||||||||| |  ||| ||||||||||||||||    
T  33660531 actagaaaagtcattttaatgacttcaccatagaatttt 33660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 19314000 - 19313852
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||  ||||| ||||||||||| || |||| ||| | |  |||||    ||||||||||||||| ||| |||    
T  19314000 tcttgttaatctgatgaattgatgatactat-aggactgaacttttgatgtcactgtataaatagtaaggtgt----tactcacaacacttttgatgcta 19313906  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    || |||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  19313905 taatgttaacttcaccagaaaagtcattctaatgacttcaccatagaattttcc 19313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 31570788 - 31570938
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||| ||||||||||||||||| ||||||||||| || | || ||| | ||||||||||| |||    ||||||||  ||  ||    
T  31570788 tcttgttaatctgatgaattcatgatactatgtggactgaacttttgatgtcactataaaaatagtggggtgttacttac----aacacttttaatgtta 31570883  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||| |||||||||||||| |||||| | | |||||||||||||||||||    
T  31570884 tagtgttaatttcaccagaaaagttattctcataacttcaccatagaattttcct 31570938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 11366445 - 11366588
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||||||||||||||||| || || ||||||||||| |||| |||||| | || | ||||||    |||  ||| ||| |||  |||||||||||     
T  11366445 ctgatgaattgatgatactatgagggctgaacttttgatgtcattatacaaatagtgagatgttac----tcattacatttttgatgttatagtgttaat 11366540  T
Q  115 ttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  11366541 ttcaccaaaaaagtcattcttatgatttcaccatagaattttcctata 11366588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 18494395 - 18494472
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||| || ||| ||||||| |||||||||||    
T  18494395 tactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcaccacagaattttcct 18494472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 17071789 - 17071942
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||||||||   ||  ||||||||||| ||||||||||| | || | |||||| ||||    ||| ||| | |      
T  17071789 agtcttgttaatctgatgaattgatgatactatgaataccgaacttttgatgtcattgtacaaataatgagatgttacttact----acatttttgttgt 17071884  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||    
T  17071885 tatagtgttaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttccta 17071942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 41465585 - 41465509
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||| |||| || ||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  41465585 tactcactacacctttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 41465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 2325442 - 2325574
Alignment:
Q  23 ttgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccag 122  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    ||||||  ||| ||  |||  |||| |||||||||||| ||    
T  2325442 ttgatgatactatgaggactgaacttttgatgccagtgtacaaacaatggggtgt----tactcaatacatttatgatgttatattgttaacttcacgag 2325537  T
Q  123 aaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||| | | | |||||||||||||||||||    
T  2325538 aaaagtcattcacataacttcaccatagaattttcct 2325574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 44913812 - 44913662
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggactt-aacttttgatgccattgtacaaacac-tggggtgttacgtactcacaacactttcgatac 102  Q
    |||| ||| ||||||||||||||||||||||| ||  || ||||||| ||| |||| ||||||||  || ||||||||    |||||||| ||| |||||    
T  44913812 tcttgttagtctgatgaattgatgatactatgggggattgaactttttatgtcattttacaaacaagtgaggtgttac----tcacaacatttttgatac 44913717  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    || |||||||||||||| | |||||||||| |||||| ||||||||||||||||||    
T  44913716 tacagtgttaacttcac-ataaaagtcattttcgtgacttcaccatagaattttcc 44913662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 44286089 - 44285951
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| | |||||||| || | | |    | ||| ||||||||| ||| ||||||||||||    
T  44286089 tctgatgaatttatgatactatgtggactaaacttttgatgccactatacaaacagtgagatat----tgctcgcaacacttttgatgctatagtgttaa 44285994  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||| ||||||| |||||| | ||| |||||| || ||||||    
T  44285993 cttcatcagaaaaatcattcgcatgacttcaccgtataatttt 44285951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 17054149 - 17054301
Alignment:
Q  4 gtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatact 103  Q
    ||||| ||| |||||||||||||||||| ||||   ||   |||||||||| ||||||||||||| || | |||||| ||||    ||| ||| |||  |    
T  17054149 gtcttgttaatctgatgaattgatgatattatgaataccgnacttttgatgtcattgtacaaacaatgagatgttacttact----acatttttgatgtt 17054244  T
Q  104 atagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||| |||||||||||| ||||||||||| | ||| ||||||||||||||||||||    
T  17054245 atagtattaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttccta 17054301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 27349993 - 27350109
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||||| ||||||||||| || |||||||||| || ||||||||    |||||||| ||| ||| |||    
T  27349993 tcttgttaatctgatgaattgatgatactaag-ggactgaacttttgatgtcactgtacaaacagtgtggtgttac----tcacaacatttttgatgcta 27350087  T
Q  105 tagtgttaacttcaccagaaaa 126  Q
    ||||||||||||||||| ||||    
T  27350088 tagtgttaacttcaccaaaaaa 27350109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 29242201 - 29242342
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||||||||  |||| |||||||||| ||| |||||||||| ||||||||||||    ||| | | |||  ||  |||||| ||||    
T  29242201 tctgatgaattgatgatactatgaagactgaacttttgataccactgtacaaacagtggggtgttacg----cactatattttttatgttatagttttaa 29242296  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||| ||||  |||| || ||| |||||||||||||||||||    
T  29242297 cttcaccaaaaaaaccattttcatgacttcaccatagaattttcct 29242342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 19289375 - 19289522
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||||| || | ||||||||||||||| ||||||||||||| ||||||||    ||||||  | | ||| |||      
T  19289375 agtcttattaatctgatgagttgatgatactgtgagaacttaacttttgatgtcattgtacaaacaatggggtgt----tactcattatatttttgatgt 19289470  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||| || |||||||||     ||| |||||||||||||||||||    
T  19289471 tatagtgttaacttcatcaaaaaagtcat-----tgacttcaccatagaattttcct 19289522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 37905857 - 37905782
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||  |||||||||||    
T  37905857 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttac 37905782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 4763771 - 4763628
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatag---tgt 110  Q
    |||||||||||||| |||||||| | ||| ||||||||||| || |||||||||| ||||||||    ||||||| ||| ||| | |  |||||   |||    
T  4763771 tctgatgaattgattatactatgggaactgaacttttgatgtcactgtacaaacagtggggtgt----tactcactacagttttgttgatatagtgttgt 4763676  T
Q  111 taacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||| ||||||||||||| || ||| |||| |||||||||||||    
T  4763675 taacttcatcagaaaagtcattttcatgacttcatcatagaattttcc 4763628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 33902217 - 33902068
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||| |||||||||| || ||||| ||||||||||| |||| |||||||| |||||| |    ||||||| ||| |||   ||     
T  33902217 agtcttgttaatctgatgaactgatgatactttgaggactgaacttttgatgtcattttacaaacagtggggtat----tactcactacatttt--ttat 33902124  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
      ||||||||||||||||||||||||||||||   || |||| |||||||||||||    
T  33902123 gttagtgttaacttcaccagaaaagtcattctaacgacttcatcatagaattttcc 33902068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 5881677 - 5881530
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacac-----tttcgatactatagtgt 110  Q
    ||||||||||||||||||| | ||||| ||||||||||| || |||||||||| ||||||||    ||||||||||||     ||| |||  |||| | |    
T  5881677 tgatgaattgatgatactaaggggactcaacttttgatgtcactgtacaaacagtggggtgt----tactcacaacacttttgttttgatgttataatat 5881582  T
Q  111 taacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
     ||||||||||||||||||||| |  ||| ||||| ||| ||||||||||||    
T  5881581 caacttcaccagaaaagtcattttaatgacttcacaataaaattttcctata 5881530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 26357687 - 26357577
Alignment:
Q  44 aacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttc 143  Q
    ||||||||||| || |||||||||| |||| ||||||    |||| ||| ||| |||  |||||||||||||||| ||||||||||||| || ||| |||    
T  26357687 aacttttgatgtcactgtacaaacagtgggatgttac----tcactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttc 26357592  T
Q  144 accatagaattttcc 158  Q
    |||||| ||||||||    
T  26357591 accataaaattttcc 26357577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 41051268 - 41051382
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgcca-ttgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgtta 112  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| | ||||||| | ||  ||||||  ||  ||||||||||| ||| ||||||| |||    
T  41051268 tctgatgaattgatgatactatgaggactgaacttttgatgccactggtacaaatagtgaagtgtta--ta--cacaacacttttgatgctatagtatta 41051363  T
Q  113 acttcaccagaaaagtcat 131  Q
     ||||| ||||||||||||    
T  41051364 gcttcatcagaaaagtcat 41051382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 41960991 - 41960940
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatg 54  Q
    |||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  41960991 agtcttgttaatctgatgaattgatgatactatgtggactgaacttttgatg 41960940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 33709304 - 33709403
Alignment:
Q  23 ttgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccag 122  Q
    |||||||||||||| ||||| ||||||||||| || ||||| |||| ||| ||||    ||||| ||||||||| |||  |||||||||||||||||||     
T  33709304 ttgatgatactatggggactgaacttttgatgtcactgtactaacagtggagtgt----tactcgcaacacttttgatgttatagtgttaacttcaccat 33709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 43648297 - 43648374
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| |||||||| ||||||||||||||  |||| ||||||||||| |||| |||||||| || ||||||||    
T  43648297 agtcttgttaatctgatgagttgatgatactatgatgactgaacttttgatgtcattatacaaacagtgaggtgttac 43648374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 17245110 - 17245158
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  17245110 ttaactttaccagaaaagtcattctcgcgacttcaccatagaattttcc 17245158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 6177823 - 6177774
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||||||||| ||| ||| || ||||||||||||    
T  6177823 ttaacttcaccagaaaagtcattctcatgacttcgccgtagaattttcct 6177774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 19093461 - 19093412
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||| |||||||| ||| ||||||||| |||||||||    
T  19093461 ttaacttcaccagaaaaatcattctcatgacttcaccataaaattttcct 19093412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 31861943 - 31861890
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctatag 163  Q
    |||||||||||| ||||||||||||| | | |||||||||||||||||| ||||    
T  31861943 ttaacttcaccaaaaaagtcattctcataacttcaccatagaattttccaatag 31861890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 43446463 - 43446512
Alignment:
Q  111 taacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||||||||  ||||||||||||| ||| ||||||||||||||||||||    
T  43446463 taacttcaccgaaaaagtcattctcatgacttcaccatagaattttccta 43446512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 18494343 - 18494383
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatg 54  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  18494343 tctgatgaattgatgatactatgaggactgaacttttgatg 18494383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 45327872 - 45327820
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatg 54  Q
    ||||||| ||| |||||||||||||||||||||||  |||| |||||||||||    
T  45327872 cagtcttgttaatctgatgaattgatgatactatgatgactgaacttttgatg 45327820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 7006991 - 7007050
Alignment:
Q  21 aattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||||||||||||| | ||| |||||||||||| | |||||||||| |||| ||||||    
T  7006991 aattgatgatactatgggaactaaacttttgatgctactgtacaaacagtgggatgttac 7007050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 41643920 - 41643869
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
    |||||||||||| |||||||||| || ||| |||||||||||||||| ||||    
T  41643920 ttaacttcaccaaaaaagtcattatcatgacttcaccatagaatttttctat 41643869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 34441921 - 34441970
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||| |||| |||||||||| || ||| |||||||||||||||||||    
T  34441921 ttaactttaccaaaaaagtcattttcatgacttcaccatagaattttcct 34441970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 7007051 - 7007095
Alignment:
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||| |||| |||||||| ||| ||||||||||||||||||||    
T  7007051 tcaccaaaaaaatcattctcatgacttcaccatagaattttccta 7007095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 18947598 - 18947642
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaatt 154  Q
    ||||||||||||||||||| ||| || ||| ||||||||||||||    
T  18947598 ttaacttcaccagaaaagttattttcatgacttcaccatagaatt 18947642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 22963448 - 22963400
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||| |||||||||||||||||  ||| ||||||||| ||||||||    
T  22963448 ttaactttaccagaaaagtcattcttatgacttcaccataaaattttcc 22963400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 22998029 - 22998077
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||| |||||||||||||||||  ||| ||||||||| ||||||||    
T  22998029 ttaactttaccagaaaagtcattcttatgacttcaccataaaattttcc 22998077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 41713212 - 41713164
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||| |||||||||||| ||||| || ||||||||| ||||||||||||    
T  41713212 ttaatttcaccagaaaaatcattttcatgatttcactatagaattttcc 41713164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 41960938 - 41960882
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||| || ||||||||||    ||| |||||||||||||||||||    
T  41960938 tatagtgttaacttcatcaaaaaagtcatttctatgacttcaccatagaattttcct 41960882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 8741923 - 8742063
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactgggg-tgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||| ||||||    |||||||||||| ||| |||||||||||||    
T  8741923 tgatgaattgatgatactatggagactgaacttttgatgccattgtacaaacaatgggggtgttac----tcacaacacttttgatgctatagtgttaac 8742018  T
Q  115 ttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||    
T  8742019 ttcaccagaaaagtcattctcatgacttcaccatagaattttcct 8742063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 36860561 - 36860422
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||| |||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||    |||||||| |||  |||||||||||||||||    
T  36860561 tgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgttac----tcacaacattttttatactatagtgttaact 36860466  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||    
T  36860465 tcaccagaaaaatcattttcgtgacttcaccatagaattttcct 36860422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 36866911 - 36866762
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||| |||||||||  ||||| ||||||||||||||||||||||||| |||||||||||    |||||| | ||| |||| ||    
T  36866911 tcttgttagtctgatgaattgttgatactatcgggactgaacttttgatgccattgtacaaacagtggggtgttac----tcacaatatttttgatatta 36866816  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  36866815 tagtgttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttcc 36866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 40133534 - 40133385
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||||| | |||||||||||    |||||||| ||| |||||||    
T  40133534 tcttgttagtctgatgaattgttgatattatggggactgaacttttgatgccattgtacaaatagtggggtgttac----tcacaacatttttgatacta 40133439  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    || |||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  40133438 taatgttaacttcaccacaaaagtcattttcgtgacttcaccatagaattttcc 40133385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 25500952 - 25501099
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||  ||||||||||||||||| || |||||||||| || |||||||     |||||||||||| ||| |||    
T  25500952 tcttgttaatctgatgaattgatgatactatagggacttaacttttgatggcagtgtacaaacagtgaggtgttat----tcacaacacttttgatgcta 25501047  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  25501048 tagtgttaactttaccagaaaagtcattctcatgacttcaccatagaatttt 25501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 19120008 - 19119858
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||| |||||| ||||| ||||||||||| || |||||||||| |||||||||||    |  ||||||||| ||| |||    
T  19120008 tcttgttaatctgatgaattgatgacactatggggactgaacttttgatgtcactgtacaaacagtggggtgttac----tagcaacacttttgatgcta 19119913  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  19119912 tagtgttaacttcaccacaaaagtcattctcatgacttcaccatagaattttcct 19119858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 26268223 - 26268076
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||| ||||||||    |||||| |||||||| ||| |||    
T  26268223 tcttgttaatctgatgaattgatgatactatgtggactaaacttttgatgtcaccgtacaaacagtggggtgt----tactcaaaacacttttgatgcta 26268128  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||||||||| |||||||| ||| |||||  |||||||||    
T  26268127 tagtgttaacttcaccagaaaaatcattctcatgacttcactgtagaatttt 26268076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 5837693 - 5837557
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||||||||  |||| || |||||||| || |||||||||| |||||||||||    |||||||||||| ||| ||||||||||| ||    
T  5837693 tgatgaattgatgatactatggagactgaaattttgatgtcactgtacaaacagtggggtgttac----tcacaacacttttgatgctatagtgttacct 5837598  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||||||| ||| |||||| |||||||||    
T  5837597 tcaccagaaaagtcattctcatgaattcaccgtagaatttt 5837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 7693366 - 7693230
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||| | ||| | |||||||||||||| |||||||||| |||| ||||||    |||||||||||| |||  |||||||||||||||    
T  7693366 atgaattgatgatactaagaggattgaacttttgatgccactgtacaaacagtgggatgttac----tcacaacacttttgatgttatagtgttaacttc 7693271  T
Q  118 accagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||| |  ||| ||||||||||||||||||    
T  7693270 accagaaaagtcattttaatgacttcaccatagaattttcc 7693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 27330444 - 27330305
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||||| |  ||||||||       ||||||||| |||  |||||||||||    
T  27330444 tctgatgaattgatgatactatgaagactgaacttttgatgccattgtacaaacagtaaggtgttact------caacacttttgatgttatagtgttaa 27330351  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||| |  || |||||||||||||||||||    
T  27330350 cttcaccagaaaagtcattcccacgacttcaccatagaattttcct 27330305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 22019770 - 22019632
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||| ||||||||||| | ||||||||||||||||| || | |||||||| |||||||||||    |||||||||||| ||| ||||||| ||||||    
T  22019770 tgatgaagtgatgatactaaggggacttaacttttgatgtcactatacaaacaatggggtgttac----tcacaacacttttgattctatagttttaact 22019675  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||||||||||  | | |||||||||||| |||||    
T  22019674 tcaccagaaaagtcattctaataacttcaccatagaaatttcc 22019632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 30969350 - 30969500
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||| ||| | ||||||||    ||||||||||||||| |||  ||    
T  30969350 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtataaatagtggggtgt----tactcacaacacttttgatgtta 30969445  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||| || |||||||| ||| ||||   ||||||||||||    
T  30969446 tagtgttaacttcaccagataaatcattctcatgacttcattgtagaattttcct 30969500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 9200371 - 9200230
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||| | ||||| ||||||||||| || |||||||||  |||||||||||    |||||||||||| |||  |||||||||||||    
T  9200371 tgatgaattgatgatactaagaggactaaacttttgatgtcactgtacaaactgtggggtgttac----tcacaacacttttgatgttatagtgttaact 9200276  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
    ||||||||||||| ||| |  ||| ||||||||| |||||||||||    
T  9200275 tcaccagaaaagttattttaatgacttcaccataaaattttcctat 9200230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 1429169 - 1429323
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | |||||||||||||||||||||  |||| || ||||||||||| |||||||||| |||||||||||    |||| | | ||| ||| |    
T  1429169 agtcttgttaatttgatgaattgatgatactatggagactgaatttttgatgccagtgtacaaacagtggggtgttac----tcactatatttttgatgc 1429264  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
    ||||||||||||||||||| || ||||||| || ||| ||||||||||| |||||||||    
T  1429265 tatagtgttaacttcaccaaaagagtcattttcatgacttcaccatagatttttcctat 1429323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 22980944 - 22980794
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| |||||  |||||| |||||| |    |||||||   | ||| |||||    
T  22980944 agtcttgttaatctgatgaattgatgatactatggggactgaacttttgatgtcattgctcaaacagtggggtat----tactcactgtatttttgatac 22980849  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    ||||||||||||||||||||||||||||||||| | | |||| |||| |||||||    
T  22980848 tatagtgttaacttcaccagaaaagtcattctcataacttcatcataaaattttc 22980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 39572968 - 39572815
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||| ||||||||||| | ||| ||||||||||| || || ||||||| ||| |||||||    |||||||| |||  ||| ||    
T  39572968 tcttgttaatctgatgaatttatgatactatgagaactgaacttttgatgtcactgcacaaacagtggagtgttac----tcacaacattttttatatta 39572873  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    |||| ||||||| || ||||||||||||||| ||| ||||||||||||||||||||||    
T  39572872 tagtattaacttaactagaaaagtcattctcatgacttcaccatagaattttcctata 39572815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 24886255 - 24886101
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | |||||| |||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||  ||| ||| |||      
T  24886255 agtcttgttaatatgatgagttgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacatttttgatgt 24886160  T
Q  103 tatagtgttaacttcacc--agaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||| |||||||||||  | ||||||||||||| ||||||||||||| |||||||||    
T  24886159 tatagtattaacttcaccaaaaaaaagtcattctcatgatttcaccataaaattttcct 24886101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 15724626 - 15724490
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||| |||| ||||| |||||| |||| ||||||| ||||| |||||||||||    |||||| ||||| |||  |||||||||||||    
T  15724626 tgatgaattgatgatattatg-ggactgaacttt-gatgtcattgtataaacagtggggtgttac----tcacaaaacttttgatgttatagtgttaact 15724533  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||| ||||||||||||| | | ||||||||||||||||||    
T  15724532 tcaccaaaaaagtcattctcataacttcaccatagaattttcc 15724490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 699301 - 699152
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| ||||  |||| ||||||||||| || |||||||||| ||||||||    ||||||| | | |||  || |    
T  699301 agtcttgttaatctgatgaattgatgatattatgatgactgaacttttgatgtcactgtacaaacagtggggtgt----tactcactagattttttatgc 699206  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||| |||||||||||||||| | | ||||||||| ||||||    
T  699205 tatagtgttaacttcatcagaaaagtcattctcataacttcaccataaaatttt 699152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 5112352 - 5112489
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    ||||||| | | |||  ||  |||||| ||||||||    
T  5112352 atgaattgatgatactatggggactgaacttttgatgccactgtacaaacagtggggtgt----tactcactatattttttatgttatagtattaacttc 5112447  T
Q  118 accagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||| |||||||||| || ||| ||||||||| |||||||||    
T  5112448 accaaaaaagtcattttcatgacttcaccataaaattttcct 5112489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 31786669 - 31786821
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| ||| | |||||||||||||| |||||||||| |||||      || ||||| ||| |||  ||     
T  31786669 cagtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgccactgtacaaacagtgggg----cagtgctcactacatttttcatg 31786764  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||||||||||| |||||||||||||   | ||||| ||||||||||||    
T  31786765 ctatagtgttaacttcaccaaaaaagtcattctcactacttcactatagaattttcc 31786821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 32563298 - 32563150
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| || | ||||| ||||||||||| || |||||| ||| ||| |||||||    |||||||||||| |||  ||    
T  32563298 tcttgttaatctgatgaattgatgatattaaggggactgaacttttgatgtcactgtacagacagtggagtgttac----tcacaacacttttgatgtta 32563203  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    |||||||||||||| ||||||| ||||| |  ||| |||||||||||||||||    
T  32563202 tagtgttaacttcatcagaaaaatcattttaatgacttcaccatagaattttc 32563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 8466882 - 8466744
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||| | |||||||||| ||| |||||||| |  |||||||||     |||||||||||| |||  || ||||||||||    
T  8466882 tgatgaattgatgatactatggggattgaacttttgataccactgtacaaagag-ggggtgttat----tcacaacacttttgatgttacagtgttaact 8466788  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||| |||  ||| ||||||||||||||    
T  8466787 tcaccagaaaagtcattctcatgacctcatcatagaattttcct 8466744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 38528260 - 38528412
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| |||||||||||||||||||||||  |||| ||||||||||| || |||| ||||| ||||||||    ||||||  ||| ||| |||     
T  38528260 cagtcttgttaatctgatgaattgatgatactatg-agactgaacttttgatgtcactgtataaacaatggggtgt----tactcattacaattttgatg 38528354  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
     |||||||||||||||| |||||||  |||| || ||| |||||||||||||||||||    
T  38528355 ttatagtgttaacttcatcagaaaaaccattttcatgacttcaccatagaattttcct 38528412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 14409350 - 14409501
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| | ||| ||||||||||||||  |||  || | ||||||| |||    |||| ||| ||| |||     
T  14409350 cagtcttgttaatctgatgaattgatgatactatgag-actgaacttttgatgccaccgtattaagagtggggtgctac----tcactacatttttgatg 14409444  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
     ||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||    
T  14409445 ttatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 14409501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 21088803 - 21088941
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||| |||||||||| ||||| ||||||||||| ||||||||||||| ||||||||     |||||||||| |||  |||||| ||| ||||||    
T  21088803 tgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgt----cactcacaacattttttatactacagt-ttaact 21088897  T
Q  116 tcacc-agaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||| | |||||||||| |||||| |||| | |||||||||||    
T  21088898 tcaccaaaaaaagtcattttcgtgacttcatcgtagaattttcc 21088941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 27318511 - 27318660
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | |||||||||||||||||| || | ||| ||||||||||| ||||||||||||| ||| ||||    ||||||| ||| |||  ||      
T  27318511 agtcttgttaatatgatgaattgatgatactgtgagaactaaacttttgatgtcattgtacaaacagtggtgtgt----tactcactacattttttatgt 27318606  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    | |||||||||||||||||||||| |||||||| ||| |||||| | |||||||    
T  27318607 tttagtgttaacttcaccagaaaaatcattctcatgacttcaccgttgaatttt 27318660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 23116257 - 23116397
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||||||||||||||||  ||| |||||||||| ||| |||||||||| |||||||     ||||||| ||| ||| |||  |||| ||||||    
T  23116257 tctgatgaattgatgatactatgtaaactgaacttttgattccactgtacaaacagtggggtg----ctactcactacagttttgatgttataatgttaa 23116352  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||  | |||||||||| || |||  |||||||||||||||||    
T  23116353 cttcataaaaaaagtcattttcatgacgtcaccatagaattttcc 23116397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 33908385 - 33908245
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| |||||  |||||||||||||||| ||||| ||||||||||||||  ||||||||| ||| |||     ||||||| ||||||| |||     
T  33908385 cagtcttgttaatctgaataattgatgatactatgaggactgaacttttgatgccaccgtacaaacagtggagtg----ctactcactacacttttgatg 33908290  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcacc 146  Q
     ||||||||| |||||||||||||  |||||||| ||| ||||||    
T  33908289 atatagtgttgacttcaccagaaagttcattctcatgacttcacc 33908245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 35933978 - 35933899
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
    ||||||||||||||| ||| ||||||||||||||||| || |||| |||||||| ||| ||||||||| |||||||||||    
T  35933978 tactcacaacacttttgattctatagtgttaacttcatcaaaaaaatcattctcatgacttcaccatacaattttcctat 35933899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 12910495 - 12910349
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtac-----aaacactggggtgttacgtactcacaacactttcgatactatagt 108  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| || |||||     ||||| |||||||||||| |||    | | ||| |||  ||||||    
T  12910495 tctgatgaattgacgatactatgaggactgaacttttgatgtcactgtactgtacaaacagtggggtgttacgcact----atatttttgatgttatagt 12910400  T
Q  109 gttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
     |||||||||||| |||||||||| || ||| |||||||||||||||||||    
T  12910399 tttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcct 12910349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 22255333 - 22255256
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| |||||||||||||||||| |||| | ||| ||||||||||||||||||||||||  |||||||||||    
T  22255333 agtcttgttaatctgatgaattgatgataatatgagaactgaacttttgatgccattgtacaaacggtggggtgttac 22255256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 35826522 - 35826659
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||| ||||||||||||| ||||| ||||||||||| || |||||||||| ||  |||||||    |||  ||| ||| |||  |||||| ||||||||    
T  35826522 atgaactgatgatactatgaggactgaacttttgatgtcactgtacaaacaatgaagtgttac----tcagtacatttttgatgttatagtattaacttc 35826617  T
Q  118 accagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    || | |||||||||| || ||| |||||||||||||||||||    
T  35826618 acaaaaaaagtcattatcatgacttcaccatagaattttcct 35826659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 22974106 - 22974258
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||| |||| | | | |||||||||||  |||||||||||| |||| ||||||    |||  ||  ||| |||      
T  22974106 agtcttgttattctgatgagttgatgataatatgagaattgaacttttgatgttattgtacaaacagtgggatgttac----tcattacttttttgatgt 22974201  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||| |||| |||||||| | | |||||||||||||||||||    
T  22974202 tatagtgttaacttcaccaaaaaaatcattctcataacttcaccatagaattttcct 22974258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 25668798 - 25668687
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||| ||||||||||||||||| | ||||| |||||||||||||| ||| |||||| ||||||||    ||||||||||||||| |||  ||    
T  25668798 tcttgttaatctaatgaattgatgatactaaggggactgaacttttgatgccactgttcaaacagtggggtgt----tactcacaacacttttgatgtta 25668703  T
Q  105 tagtgttaacttcacca 121  Q
     ||||||||||||||||    
T  25668702 -agtgttaacttcacca 25668687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 8437097 - 8436962
Alignment:
Q  23 ttgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccag 122  Q
    |||||||||  ||| ||||| ||||||||||| || |||||||||| |||| ||||||    |||| ||||||| ||  |||||||||||| |||||||     
T  8437097 ttgatgatataatgaggactgaacttttgatgtcactgtacaaacaatgggatgttac----tcactacactttggaagctatagtgttaatttcaccaa 8437002  T
Q  123 aaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    |||| |||||||| ||| |||||  ||||||| |||||||    
T  8437001 aaaaatcattctcatgacttcacattagaattgtcctata 8436962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 16004475 - 16004552
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagtc-attctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||| ||| |||  ||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||    
T  16004475 tactcacaacatttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccatagaattttcc 16004552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 31705636 - 31705785
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||| | |||||  |||||||||| ||||||||||||  | ||||||    |||||   ||| ||| |||      
T  31705636 agtcttgttaatctgatgaattgatgatacta-gaggactggacttttgatgtcattgtacaaacggtagggtgt----tactcgttacatttttgatgt 31705730  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    ||||||||||||||||||| |||| ||||| |  ||| |||||||||||||||||    
T  31705731 tatagtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattttc 31705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 22616542 - 22616487
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctatagta 165  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||||||| |||||    
T  22616542 ttaacttcaccagaaaagtcattttcatgacttcaccatagaattttcctttagta 22616487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15992566 - 15992636
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggt 75  Q
    |||| ||| |||||||||||||||||||||||  |||| ||||||||||| || |||||||||| ||||||    
T  15992566 tcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcactgtacaaacagtggggt 15992636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 35511501 - 35511652
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||| ||||| ||||  |||| ||||||||||| || | |||||||| ||| ||||    ||||||| ||| | | |||      
T  35511501 agtcttgttaatctgatgaattggtgatagtatgatgactgaacttttgatgtcactttacaaacagtggagtgt----tactcactacagtgttgatgt 35511596  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||| ||||||||||| |||||| |||||| || ||| |||||||||| |||||||    
T  35511597 tataatgttaacttcatcagaaacgtcattttcatgacttcaccataggattttcc 35511652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 43308688 - 43308746
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggg 73  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||| |||| ||||    
T  43308688 ctgatgagttgatgatactatgaggactgaacttttgatgccattgtacgaacagtggg 43308746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 28416553 - 28416663
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| || |  || | |||||||||| ||| |||||||||| |||| ||||||    |||||| ||||| |||| ||    
T  28416553 tcttgttaatctgatgaattgatgatattaaggagattgaacttttgattccactgtacaaacagtgggatgttac----tcacaatacttttgatatta 28416648  T
Q  105 tagtgttaacttcac 119  Q
    |||||||||||||||    
T  28416649 tagtgttaacttcac 28416663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 5830034 - 5829975
Alignment:
Q  21 aattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||  | |||||||||    
T  5830034 aattgatgatactatgaggactaaacttttgatgtcattgtacaaacggtagggtgttac 5829975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 26317804 - 26317859
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||||| |||||||||| || ||| |||| |||||||||||||    
T  26317804 tatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaattttcc 26317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 11898139 - 11898004
Alignment:
Q  17 gatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaactt 116  Q
    |||||||||||||||||||| ||||| ||||||||||| || |||||||  | | ||||||    ||||||   |||||| ||| ||||| | |||||||    
T  11898139 gatgaattgatgatactatgaggactaaacttttgatgtcactgtacaactagtagggtgt----tactcagtgcacttttgatgctataatattaactt 11898044  T
Q  117 caccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
     ||||||||||| ||| || ||| |||||| || ||||||    
T  11898043 taccagaaaagttattatcatgacttcaccctaaaatttt 11898004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 7208888 - 7208964
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| ||||||||||||||||||||| | ||||| ||||||||||| || |||||||||  | |||||||||    
T  7208888 agtcttgttaatctgatgaattgatgatacta-gaggactgaacttttgatgtcaatgtacaaacggtagggtgttac 7208964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 13956444 - 13956521
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||| ||| ||| |||  ||||||||||||||||  |||||||||||| || ||| |||||| ||||||||||||    
T  13956444 tactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttcct 13956521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 13380549 - 13380493
Alignment:
Q  104 atagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||| ||||||||||| ||||||||||||||| ||| ||||||||| ||||| ||||    
T  13380549 atagggttaacttcactagaaaagtcattctcatgacttcaccataaaatttgccta 13380493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 14919565 - 14919629
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| |||||||||||||| ||||| ||||||||||| |||| || ||||| || ||||||||    
T  14919565 tgatgagttgatgatactatgaggactgaacttttgatgtcattatataaacagtgaggtgttac 14919629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 36055874 - 36055926
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    |||||||||| ||||||||||||||| |||  |||||||| ||||||||||||    
T  36055874 ttaacttcacaagaaaagtcattctcatgacatcaccataaaattttcctata 36055926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 33753050 - 33753093
Alignment:
Q  115 ttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||| |||||||| ||||||||| ||||||||||||    
T  33753050 ttcaccagaaaaatcattctcatgatttcactatagaattttcc 33753093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 23954813 - 23954891
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgcca-ttgtacaaacactggggtgttac 80  Q
    |||||| ||| | |||||||||||||||||||||   ||| |||||||||||||| | ||| ||||| |||||||||||    
T  23954813 agtcttgttaatatgatgaattgatgatactatggaaactgaacttttgatgccactagtaaaaacagtggggtgttac 23954891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 35934044 - 35933992
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgcca 57  Q
    |||| ||| |||||||||||||||||||||||  ||||  |||||||||||||    
T  35934044 tcttgttaatctgatgaattgatgatactatggtgactggacttttgatgcca 35933992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 11466964 - 11466811
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    |||||||||||||| ||||  ||    
T  11466964 tcttgttaatctgatgaattgatgatactatggggactaaacttttgatgccactgtacaaacagtggggtgt----tactcacaacacttgcgatgtta 11466869  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    |||| ||||||||| ||||||||||||||||  || ||||||||||||||||||||||    
T  11466868 tagtcttaacttcatcagaaaagtcattctcaagacttcaccatagaattttcctata 11466811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 4015589 - 4015451
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||||| ||||||||||| || | |||||||| | |||||||||    |||||||||||| ||| ||||||||||||||    
T  4015589 tgatgaattgatgatactatgaggactgaacttttgatgtcactctacaaacagttgggtgttac----tcacaacacttttgatgctatagtgttaact 4015494  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||| |||||||||||||||| ||| ||||||||||||||||||    
T  4015493 tcatcagaaaagtcattctcatgacttcaccatagaattttcc 4015451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 34133075 - 34132925
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |||||||    
T  34133075 tcttattagtctgatgaattgatgatattatggggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacatttttgatacta 34132980  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||| ||||||| |||||||||| |||||| ||||  |||||||||||||    
T  34132979 tagtgttaatttcaccaaaaaagtcattttcgtgacttcattatagaattttcct 34132925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 35844466 - 35844316
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| || |||||||||| || ||||||||    |||||||| ||| | |  ||    
T  35844466 tcttgttaatctgatgaattgatgatactatggggactaaacttttgatgtcactgtacaaacagtgaggtgttac----tcacaacatttttgttgtta 35844371  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  35844370 tagtgttaacttcaccagaaaagtcattatcatgacttcaccatagaattttcct 35844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 48355083 - 48354931
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| |||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||    ||||||  ||| |||  |||     
T  48355083 agtcttgttaatctgatgagttgatgatactatgagaactgaacttttgatgccattgtacaaacaatggggtgt----tactcattacatttttaatat 48354988  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||| |||| |||||||| ||| |||||||||||||||||||    
T  48354987 tatagtgttaacttcaccataaaaatcattctcatgacttcaccatagaattttcct 48354931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 21193746 - 21193596
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||| ||||||| ||| ||||| ||||||||||| || | |||||||| |||||||||||    |||||||||||| ||| | |    
T  21193746 tcttgttaatctgatgaattaatgataccatggggactgaacttttgatgtcactctacaaacagtggggtgttac----tcacaacacttttgattcaa 21193651  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
     |||||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  21193650 cagtgttaacttcaccagaaaagtcattctcatgactttaccatagaattttcct 21193596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 22451111 - 22450958
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| | ||||||||||||||||||||| ||||| ||||||||||||||   |||||||| || ||||     ||||||| ||||||| |||     
T  22451111 cagtcttgttaatatgatgaattgatgatactatggggactgaacttttgatgccaccatacaaacagtgaggtg----ctactcactacacttttgatg 22451016  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||    
T  22451015 ctatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaattttcct 22450958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 44186548 - 44186688
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||||| ||||||||||| || |||| |||||  ||||||||||    |||||||||||| ||| ||||||||||||||    
T  44186548 tgatgaattgatgatactatggggactgaacttttgatgtcactgtataaacagcggggtgttac----tcacaacacttttgatgctatagtgttaact 44186643  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||| |||| ||||||||  || |||| |||||||||||||||    
T  44186644 tcaccaaaaaaatcattctctcgacttcatcatagaattttccta 44186688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 51213015 - 51213166
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||    | ||||  ||| |||  ||      
T  51213015 agtcttgttaatctgatgagttgatgatactatgaggactcaacttttgatgccattgtacaaacagtggggtgt----tgctcattacattttttatgt 51213110  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    || |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  51213111 tacagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcc 51213166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 37203209 - 37203058
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||| ||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    ||||||| ||| ||| |||      
T  37203209 agtcttgttaatcttatgaattgatgatactatgaggactgaacttttgatgccactgtacaaacagtggggtgt----tactcactacaattttgatgt 37203114  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||||||| || |||| ||||| |  ||| ||||||||||||||||||    
T  37203113 tatagtgttaacttcatcaaaaaaatcatttttatgacttcaccatagaattttcc 37203058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 40552304 - 40552447
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||  ||| |||||||    |||  ||| ||| |||  |||||||||||    
T  40552304 tctgatgaattgatgatattatgaggactgaacttttgatgtcattgtacaaacggtggagtgttac----tcattacatttttgatgttatagtgttaa 40552399  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
    |||| ||| ||||||||||||| ||| |||||||||||||||||||||    
T  40552400 cttctccaaaaaagtcattctcatgacttcaccatagaattttcctat 40552447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 11357398 - 11357554
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacact-ggggtgttacgtactcacaacactttcgata 101  Q
    |||||| ||| |||||||||||||||||||||||  |||| |||||||||||| | |||||||||| | |||||||    ||||||| | ||||| |||     
T  11357398 agtcttgttaatctgatgaattgatgatactatgatgactgaacttttgatgcaactgtacaaacagtgggggtgt----tactcactatacttttgatg 11357493  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtga---tttcaccatagaattttcct 159  Q
    |||||||||||||||||||||||||||||||||| |||    |||||| ||||||||||||    
T  11357494 ctatagtgttaacttcaccagaaaagtcattctcatgacttcttcaccttagaattttcct 11357554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 46297811 - 46297945
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||| | ||||| ||||||||| ||||||||||||||| ||| |||||||    |||| | | ||| |||  |||||||||||||||    
T  46297811 atgaattgatgatactacggggactgaacttttgacgccattgtacaaacagtggtgtgttac----tcactatatttttgatgttatagtgttaacttc 46297906  T
Q  118 accagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||||||||||||| || ||| ||||||||||||||||    
T  46297907 accagaaaagtcattttcatgacttcaccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 7327530 - 7327670
Alignment:
Q  17 gatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtg-ttaact 115  Q
    |||||||||||||||||||| ||||| ||||||||||| || |||||||| | ||| ||||    ||||||||||||||| |||  ||||||| ||||||    
T  7327530 gatgaattgatgatactatggggactgaacttttgatgtcactgtacaaataatggagtgt----tactcacaacacttttgatgttatagtgtttaact 7327625  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||| | ||||||||||||| | | ||||||||||||||||||||    
T  7327626 tcactaaaaaagtcattctcataacttcaccatagaattttccta 7327670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 40936131 - 40935995
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||| |||||||||||| ||||| ||||||||||| || |||| ||||| || ||||||||    || ||||||||| ||| |||    
T  40936131 tcttgttaatctgatgaatagatgatactatgaggactgaacttttgatgtcactgtataaacaatgaggtgttac----tcgcaacacttttgatgcta 40936036  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcac 145  Q
    |||||||||||||||||||||| |||||||| ||| |||||    
T  40936035 tagtgttaacttcaccagaaaaatcattctcatgacttcac 40935995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 52040958 - 52041110
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacact-ggggtgttacgtactcacaacactttcgatact 103  Q
    |||| ||| |||||||||||||||||||||||  |||| |||||||||||||| | |||||||| | |||| |||||    |||| ||||||| |||  |    
T  52040958 tcttgttaatctgatgaattgatgatactatgatgactgaacttttgatgccactatacaaacatttggggagttac----tcactacacttttgatgtt 52041053  T
Q  104 atagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||  ||||||||||||    
T  52041054 atagtattaacttcaccagaaaagtcattctcatgacttcacctcagaattttccta 52041110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 45174645 - 45174494
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||| | |||||||||| ||  |||||||   | ||||||||||| |||  ||    
T  45174645 tcttgttaatctgatgaattgatgatactatggggactgaacttttgatgctactgtacaaacagtgaagtgttac--tcacacaacacttttgatgtta 45174548  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||| |||||| ||||||   | ||||||||| ||||||||    
T  45174547 tagtgttaacttcaccaaaaaagttattctcacaacttcaccataaaattttcc 45174494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 26941294 - 26941448
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||| ||||||| ||| ||||| ||||||||||| |||| |||||||| ||||||||    ||||||  | | ||| |||      
T  26941294 agtcttgttaatctgatgaattaatgataccatgaggactgaacttttgatgtcattatacaaacagtggggtgt----tactcattataattttgattt 26941389  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
    ||||||||||||||||||| |||| |||||||  ||| |||||||||||||||||||||    
T  26941390 tatagtgttaacttcaccaaaaaaatcattcttatgacttcaccatagaattttcctat 26941448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 29099484 - 29099356
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||| | ||||| |||||| |||| || |||||||||| ||||||||    ||||||| ||| |||  ||  |||||||||||||    
T  29099484 tgatgaattgatgatactaaggggactgaactttagatgtcactgtacaaacagtggggtgt----tactcacgacattttttatgttatagtgttaact 29099389  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccat 148  Q
    |||||||||||||||||||  ||| ||||||||    
T  29099388 tcaccagaaaagtcattctaatgacttcaccat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 3655238 - 3655389
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||  ||||||||    ||||||  ||| |||  ||  ||    
T  3655238 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacggtggggtgt----tactcattacattttttatgtta 3655333  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||||||||| | || |||||||||| |  ||| ||||||||| ||||||||||    
T  3655334 tagtgttaactttatcaaaaaagtcatttttatgacttcaccataaaattttccta 3655389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 4761683 - 4761837
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| || ||||| |||||||||||||| ||||| ||||||||||| ||||||||||||| ||  ||||    ||||||  ||| ||| ||||     
T  4761683 agtcttgttaatcagatgagttgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgaagtgt----tactcattacatttttgatat 4761778  T
Q  103 tatagtgttaacttcacc--agaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||| |||||||||||  | |||||||| |||| ||| |||||||||||||||||||    
T  4761779 tatagtattaacttcaccaaaaaaaagtcaatctcatgaattcaccatagaattttcct 4761837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 37157849 - 37157699
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||| || ||||||||||||||||  |||| |||||||||||||| ||||||| || |||||||||||    |||| ||| ||| |||      
T  37157849 agtcttgttaatcttataaattgatgatactatgatgactgaacttttgatgccactgtacaa-cagtggggtgttac----tcactacaattttgatgt 37157755  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||||||| || ||||| |||| || ||| ||||||||||||||||||    
T  37157754 tatagtgttaacttcatcaaaaaagccattttcatgacttcaccatagaattttcc 37157699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 24488998 - 24489140
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| |||| ||||| ||||||||||| |||||| |||||| |||  |||    ||||||||||| |||  ||||||    
T  24488998 tcttgttagtctgatgaattgatgataatatggggactgaacttttgatgtcattgtgcaaacagtggaatgt----tactcacaacatttttaatacta 24489093  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccataga 151  Q
    |||| |||||||||| | |||| ||||| |||||| |||||| ||||    
T  24489094 tagtcttaacttcacaaaaaaaatcattttcgtgacttcaccgtaga 24489140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 33378818 - 33378968
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| |||||||||||||| |||||||| ||||| ||||||||||| ||  ||||||| | ||||||   || ||||||| ||||||| ||||    
T  33378818 cagtcttgttaatctgatgaattgataatactatggggactgaacttttgatgtcaccgtacaaatattggggt---ac-tactcactacacttttgata 33378913  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||| |||||||   ||||||||||||| | | ||  |||||||||||||||    
T  33378914 ctatagtgttgacttcac---aaaagtcattctcataactttgccatagaattttcct 33378968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 42506109 - 42506186
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||||| ||||    
T  42506109 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtattac 42506186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 2008073 - 2007964
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||| ||||| ||| | |||||||||||||| |||||||||| ||||||||    |||||||||||||||  |  |||    
T  2008073 tcttgttaatctgatgaattgatgatgctatggggattgaacttttgatgccactgtacaaacagtggggtgt----tactcacaacacttttaacgcta 2007978  T
Q  105 tagtgttaacttca 118  Q
    ||||||||||||||    
T  2007977 tagtgttaacttca 2007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 47481651 - 47481512
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| || || ||||||||||| |||| |||||||| ||||||||    ||||||  ||| ||| |||  |||||||||||||    
T  47481651 tgatgaattgatgatactatgagggctaaacttttgatgtcattctacaaacagtggggtgt----tactcattacatttttgatgttatagtgttaact 47481556  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||| |||  ||||||   ||| ||||||||| |||||||||    
T  47481555 tcaccaaaaacatcattcctatgacttcaccataaaattttcct 47481512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 53229186 - 53229336
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactg-gggtgttacgtactcacaacactttcgata 101  Q
    |||||| ||| |||||||||||||||||| ||||  |||| |||||||||||| | |||||||||| || ||||||    | ||||| ||||||| |||     
T  53229186 agtcttgttaatctgatgaattgatgatattatgatgactgaacttttgatgcaactgtacaaacattgagggtgt----tgctcactacacttttgatg 53229281  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||| |||||||||||| | ||| || ||| |||||| || ||||||    
T  53229282 ctatagtgttaatttcaccagaaaaataattttcatgacttcaccttaaaatttt 53229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 55343409 - 55343470
Alignment:
Q  98 gatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  55343409 gatattatagtgttaacttcatcagaaaagtcattttcgtgacttcaccatagaattttcct 55343470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 39282794 - 39282643
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||| ||||||| |||| | ||| |||||||||||||| |||| ||||| |||||| |    ||||||| ||| ||| |||      
T  39282794 agtcttgttaatctgatgaatggatgataatatgagaactgaacttttgatgccactgtataaacagtggggtat----tactcac-acagttttgatgt 39282700  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||| || | ||||||| ||||| || ||| |||||||||||||||||||    
T  39282699 tatagtgttaattttatcagaaaaatcattttcatgacttcaccatagaattttcct 39282643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 20373330 - 20373481
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | ||||||||||||||||| ||| | ||| ||||||||||| ||||||||||||| ||||||||    |||||   ||| ||| |||      
T  20373330 agtcttgttaatttgatgaattgatgataccatgagaactgaacttttgatgtcattgtacaaacagtggggtgt----tactcgttacatttttgatgt 20373425  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||| |||||||||||| |||| |||||||  ||| ||||| ||| ||||||||    
T  20373426 tatagtattaacttcaccaaaaaaatcattcttatgacttcactataaaattttcc 20373481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 38591840 - 38591778
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaa 65  Q
    |||||| ||| |||||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  38591840 agtcttgttaatctgatgagttgataataatatgtggacttaacttttgatgccattgtacaa 38591778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 40640634 - 40640683
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  40640634 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcct 40640683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 32373571 - 32373466
Alignment:
Q  44 aacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttc 143  Q
    |||||||||||||| |||||||||| ||| ||      ||||||||||||||| ||| ||||||||||||||| |   |||||||||||||| ||| |||    
T  32373571 aacttttgatgccactgtacaaacagtggagt------tactcacaacacttttgatgctatagtgttaactttattggaaaagtcattctcatgacttc 32373478  T
Q  144 accatagaattt 155  Q
    | ||||||||||    
T  32373477 atcatagaattt 32373466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 44891637 - 44891498
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||| |||||||||||||||||||||| ||||||||||||||         || |||| ||||||    |||||||||||| |||  ||    
T  44891637 tcttgttaatctgattaattgatgatactatgtggactaaacttttgatgcca---------cagtgggatgttac----tcacaacacttttgatgtta 44891551  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||| |||||||||| || ||| |||||| || ||||||||    
T  44891550 tagtgttaacttcacca-aaaagtcattttcatgacttcaccgtataattttcc 44891498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 43975933 - 43976068
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||| |||| ||| | ||||||||||| ||| ||||||| | ||| |||     ||||||| ||||||| ||| |||||||||| |    
T  43975933 tctgatgaattgatgatattatgaggattaaacttttgatgtcatcgtacaaatagtggagtg----ctactcactacacttttgatgctatagtgttga 43976028  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||   || ||||||||||||| ||| ||||||||| ||||||    
T  43976029 ctt---caaaaaagtcattctcatgacttcaccataaaatttt 43976068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 53176194 - 53176131
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaaca 68  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||  ||||||||||||    
T  53176194 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgttattgtacaaaca 53176131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 11835737 - 11835790
Alignment:
Q  104 atagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    |||||||||||||||||| |||| |||||||| ||| |||||||||||||||||    
T  11835737 atagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttc 11835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 25579803 - 25579731
Alignment:
Q  85 tcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    |||||||||||| ||| ||||||| ||||||||||||||||| |||||||| | | || |||||| |||||||    
T  25579803 tcacaacacttttgatgctatagtattaacttcaccagaaaaatcattctcataacttaaccataaaattttc 25579731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 27480412 - 27480564
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| | ||||||||||||||||||||| ||||| ||||||||||| ||  ||||||||| | || ||     ||||||  | ||||| |||     
T  27480412 cagtcttgttaatatgatgaattgatgatactatggggactgaacttttgatgtcaccgtacaaacaattggatg----ctactcattatacttttgatg 27480507  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
     ||||||||| |||| |||| |||  |||||||| ||| |||| |||||||||||||    
T  27480508 ttatagtgttgactttaccaaaaatatcattctcatgacttcatcatagaattttcc 27480564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 3362382 - 3362243
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||| ||| ||| | |||||||||||||| |||||||| | |||| |||    ||||||| | | ||  ||| ||||||||||||||    
T  3362382 tgatgaattgatgataccatgaggagtgaacttttgatgccactgtacaaatagtgggatgt----tactcactatatttctgatgctatagtgttaact 3362287  T
Q  116 tcacc-agaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||| | |||||| ||| || | |||||||| ||||| |||||    
T  3362286 tcaccaaaaaaagttattttcataatttcaccgtagaactttcc 3362243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 45879498 - 45879548
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||||| |||||||||||||||||| ||| |||| |||||||||||||||    
T  45879498 ttaactttaccagaaaagtcattctcatgacttcagcatagaattttccta 45879548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 21009848 - 21009913
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||| |||| || || ||||||||||| |||| |||||| | |||||||||||    
T  21009848 ctgatgaattgatgataatatgagggctgaacttttgatgtcattctacaaatagtggggtgttac 21009913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 22446111 - 22446252
Alignment:
Q  16 tgatgaattgatgatactatgtggactt-aacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    ||||||||||||||||||||| ||  || |||||||||||||| |||||||| | ||||||||    ||||||| | | ||| |||  |||| |||||||    
T  22446111 tgatgaattgatgatactatgagggtttgaacttttgatgccactgtacaaa-agtggggtgt----tactcactatatttttgatgatataatgttaac 22446205  T
Q  115 ttcacc-agaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||| | |||||||||| || ||| |||||| |||||||| ||||    
T  22446206 ttcaccaaaaaaagtcattttcatgacttcaccgtagaatttcccta 22446252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 24708151 - 24708212
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtaca 64  Q
    |||||| ||| |||||||||||||||||||||||  |||| ||||||||||| || ||||||    
T  24708151 agtcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcactgtaca 24708212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 47930666 - 47930714
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||| ||||| || ||| ||||||||||||||||||    
T  47930666 ttaacttcaccagaaaaatcattttcatgacttcaccatagaattttcc 47930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 53811976 - 53812024
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||||    
T  53811976 ttaacttcatcagaaaagtcattctcatgacttcaccgtagaattttcc 53812024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 29163893 - 29163839
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    |||||||||||||||||||||||| ||||| |  ||| ||||||||| |||||||    
T  29163893 tatagtgttaacttcaccagaaaaatcattttaatgacttcaccataaaattttc 29163839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 53818509 - 53818555
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||||||||||||||| |||||||| ||| ||||||||| ||||||    
T  53818509 ttaacttcaccagaaaaatcattctcatgacttcaccataaaatttt 53818555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 38392628 - 38392673
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattt 155  Q
    |||||||||||| ||||||||||||| ||| ||||||||| |||||    
T  38392628 ttaacttcaccaaaaaagtcattctcatgacttcaccatataattt 38392673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 42204391 - 42204342
Alignment:
Q  109 gttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||| ||||||||||||||||  || ||||| ||||||||||||    
T  42204391 gttaacttcatcagaaaagtcattctcacgacttcacgatagaattttcc 42204342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 4556587 - 4556543
Alignment:
Q  111 taacttcaccagaaaagtcattctcgtgatttcaccatagaattt 155  Q
    ||||||||| |||||||||||| || ||| |||||||||||||||    
T  4556587 taacttcacgagaaaagtcattttcatgacttcaccatagaattt 4556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 46994710 - 46994754
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgta 62  Q
    |||| |||||||||||||| ||||| ||||||||||| |||||||    
T  46994710 atgagttgatgatactatgaggactgaacttttgatgtcattgta 46994754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 49359628 - 49359676
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||| | |||||||||| || ||| ||||||||||||||||||    
T  49359628 ttaacttcacaaaaaaagtcattttcatgacttcaccatagaattttcc 49359676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 8e-36; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 55241167 - 55241315
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| |||||| |||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    ||||| ||||| ||| |||| ||    
T  55241167 tcttctta-tctgataaattgatgatactatggggactgaacttttgatgccactgtacaaacagtggggtgt----tactcgcaacaattttgataata 55241261  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  55241262 tagtattaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 55241315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 27396765 - 27396618
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||| | |||||||||    ||| ||||||||  || |||    
T  27396765 tcttgttaatctgatgaattgatgatactatgaggacgaaacttttgatgtcattgtacaaacagtagggtgttac----tcataacacttttaatgcta 27396670  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    || |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  27396669 taatgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 27396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 34948170 - 34948306
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||| |||| ||||| |||||||||||||| | |||||||| |||||||||||    |||||||||||| |||  |||||||||||||    
T  34948170 tgatgaattgatgatattatgaggactgaacttttgatgccactttacaaacagtggggtgttac----tcacaacacttttgatgttatagtgttaact 34948265  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    || ||||||||||||||||| ||| ||||||||| ||||||    
T  34948266 tcgccagaaaagtcattctcatgacttcaccataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 17167862 - 17167715
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| ||||||||||| |||||||||||  || | ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |||| ||    
T  17167862 tcttcttagtctgatgaattaatgatactatggagaatgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacatttttgatatta 17167767  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    || ||||||||||| ||||||||||||| |||| | ||||||||||||||||    
T  17167766 taatgttaacttcatcagaaaagtcattttcgtaacttcaccatagaatttt 17167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 17173439 - 17173292
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| ||||||||||| |||||||||||  || | ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |||| ||    
T  17173439 tcttcttagtctgatgaattaatgatactatggagattgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacatttttgatatta 17173344  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    || ||||||||||| ||||||||||||| |||| | ||||||||||||||||    
T  17173343 taatgttaacttcatcagaaaagtcattttcgtaacttcaccatagaatttt 17173292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 29584271 - 29584410
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||||| || |||||||      | ||||||||| |||  |||||||||||    
T  29584271 tctgatgaattgatgatactatgaagactgaacttttgatgccattgtacaaacagtgaggtgtta------ctcaacacttttgatgttatagtgttaa 29584364  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||| |  || |||||||||||||||||||    
T  29584365 cttcaccagaaaagtcattcccacgacttcaccatagaattttcct 29584410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 49376116 - 49375966
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||  |||| |||||||||||||| ||||||| || ||||||||    ||||||| ||||||| ||| |||    
T  49376116 tcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgccactgtacaagcagtggggtgt----tactcacgacacttttgatgcta 49376021  T
Q  105 tagtgttaacttcaccag-aaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    || ||||||||||||||| ||||||||||||| ||| |||||| |||||||||||    
T  49376020 taatgttaacttcaccagaaaaagtcattctcatgacttcaccgtagaattttcc 49375966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 38012005 - 38011853
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||| ||| |||| ||||| ||||||||||| ||  ||||||||| ||||||| ||     |||| ||||||| |||      
T  38012005 agtcttgttaatctgatgaattgataatattatggggactgaacttttgatggcaccgtacaaacagtggggtgctat----tcactacacttttgatgt 38011910  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  38011909 tatagtgttgacttcaccagaaaagtcattctcatgatttcaccatagaattttcct 38011853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 19089513 - 19089664
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||| |||||||||||    |||  ||| ||| ||||     
T  19089513 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattatacaaacagtggggtgttac----tcattacaattttgatat 19089608  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||||||| || |||||| |||||  ||| ||||||||||||||||||    
T  19089609 tatagtgttaacttcatcaaaaaagttattcttatgacttcaccatagaattttcc 19089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 28003045 - 28003197
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| || ||||||||||||||||||||  |||| ||||||||||| || |||||||||| ||| ||   || |||| || ||||||| |||     
T  28003045 cagtcttgttaatccgatgaattgatgatactatgatgactgaacttttgatgtcactgtacaaacagtggagt---ac-tactgactacacttttgatg 28003140  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  28003141 ctatagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 28003197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 157
Target Start/End: Complemental strand, 4598130 - 4597994
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||  ||| | ||||| |||||||||||||| |||||||||| |||||||||||    |||||||||||| |||  |||||||||||||    
T  4598130 tgatgaattgatgagtctaaggggactgaacttttgatgccactgtacaaacagtggggtgttac----tcacaacacttt-gatgttatagtgttaact 4598036  T
Q  116 tcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    |||||||||||||||||||  ||| ||||||||| |||||||    
T  4598035 tcaccagaaaagtcattctaatgacttcaccataaaattttc 4597994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 7703647 - 7703517
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||||| ||||| ||||||||||| ||  ||||||||| |||||||||||    | |||||||||| |||  |||||||||||||||||||||    
T  7703647 tgatgatactatggggactgaacttttgatgtcaccgtacaaacagtggggtgttac----tgacaacacttttgatgttatagtgttaacttcaccaga 7703552  T
Q  124 aaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||| ||| || | |||||||||||||    
T  7703551 aaagtcattctcatgactttaacatagaattttcc 7703517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 25701128 - 25701269
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||||||||||||||| ||||| ||||||||||| || |||||||||| | ||||||    ||||||| ||||||| |||  |||| ||||||    
T  25701128 tctgatgaattgatgatactatgaggactgaacttttgatgtcactgtacaaacagtagggtgt----tactcactacacttttgatgttataatgttaa 25701223  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||| |||| |||||||||| || ||| ||||||||| |||||||||    
T  25701224 ctttaccaaaaaagtcattatcatgacttcaccataaaattttcct 25701269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 19440708 - 19440860
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||  ||| ||||    || |||  ||| ||| |||      
T  19440708 agtcttgttaatctgatgaattgatgatattatgaggactgaacttttgatgccattgtacaaacggtggagtgt----taatcattacatttttgatgt 19440803  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtga-tttcaccatagaattttcc 158  Q
    |||||||||||| |||||| ||||||||||||| ||| |||||||||||||||||||    
T  19440804 tatagtgttaacatcaccaaaaaagtcattctcatgactttcaccatagaattttcc 19440860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 47253878 - 47253751
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||||| ||||| ||||||||||| || |||| ||||| | ||||||    ||||||||||||||| |||  ||||||||||||||||||| |    
T  47253878 tgatgatactatgaggactgaacttttgatgtcactgtataaacaat-gggtgt----tactcacaacacttttgatgatatagtgttaacttcaccaaa 47253784  T
Q  124 aaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||| ||| ||||||||||||||||    
T  47253783 aaagtcattctcatgacttcaccatagaatttt 47253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 37663801 - 37663952
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||  ||| |||  ||      
T  37663801 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacagttttaat-- 37663894  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
      |||||||||||||| || ||||||||||||  ||| ||||||||||||||||||||    
T  37663895 gttagtgttaacttcatcaaaaaagtcattcttatgacttcaccatagaattttccta 37663952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 54499311 - 54499425
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccatt-gtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    ||||||||||||||||||||   |||| ||||||||||| |||| ||||||||  |||||||||||    |||||||||||| ||| |||||||||||||    
T  54499311 tgatgaattgatgatactatagagactgaacttttgatgtcattagtacaaacggtggggtgttac----tcacaacacttttgatgctatagtgttaac 54499406  T
Q  115 ttcaccagaaaagtcattc 133  Q
    |||||||||||||||||||    
T  54499407 ttcaccagaaaagtcattc 54499425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 35021110 - 35021247
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||| | ||||  ||||||||| |||| |||||||||| ||| |||||||    |||| ||| ||| |||  |||| ||||||||||    
T  35021110 atgaattgatgatactacgaggacgaaacttttgacgccaatgtacaaacagtggtgtgttac----tcactacatttttgatgttataatgttaacttc 35021205  T
Q  118 accagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||| || ||| |||||||||||||||||||    
T  35021206 accagaaaagtcattttcatgacttcaccatagaattttcct 35021247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 39398051 - 39397918
Alignment:
Q  21 aattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcacc 120  Q
    |||||||||||||  |  |||| ||||||||||| || |||||||||| |||||||||||    ||||||||||||  ||  ||||||||||||||||||    
T  39398051 aattgatgatactgagaagactgaacttttgatgtcactgtacaaacaatggggtgttac----tcacaacacttttaatgttatagtgttaacttcacc 39397956  T
Q  121 agaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    | ||||||||||||  ||| ||||||||||||||||||    
T  39397955 ataaaagtcattctaatgacttcaccatagaattttcc 39397918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 25184264 - 25184109
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||||||||  || | |||||| |||| ||||||||||||| | | |||||||    |||  ||| ||| |||      
T  25184264 agtcttgttaatctgatgagttgatgatactatgaagattgaactttggatgtcattgtacaaacagtagagtgttac----tcattacatttttgatgt 25184169  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    ||||||||||||||||||| || |||||||||| ||| ||||||||||||||||||||||    
T  25184168 tatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcctata 25184109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 37287862 - 37287731
Alignment:
Q  26 atgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcacc-agaa 124  Q
    |||||| |||| ||| | |||||||||||||| |||||||||| ||||||||    ||||||||||||||| |||  |||||||||||||| ||| | ||    
T  37287862 atgatattatgaggattgaacttttgatgccactgtacaaacagtggggtgt----tactcacaacacttttgatgttatagtgttaactttaccaaaaa 37287767  T
Q  125 aagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||||||||| | | ||||||||||||||||||||    
T  37287766 aagtcattctcattacttcaccatagaattttccta 37287731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 55477951 - 55478107
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgt----acaaacactggggtgttacgtactcacaacactttcg 98  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||    ||||||| ||| ||||    |||||   ||| ||| |    
T  55477951 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacaaacagtggagtgt----tactcgttacatttttg 55478046  T
Q  99 atactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||  ||||||||||||||||||| |||| |||||||| ||| |||||||||||||||||||    
T  55478047 atgttatagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcct 55478107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 23761221 - 23761095
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| || | |||||||| || |||||    ||||||||||||||| |||  ||    
T  23761221 tcttgttaatctgatgaattgatgatactatggggactgaacttttgatgtcactatacaaacagtgaggtgt----tactcacaacacttttgatgtta 23761126  T
Q  105 tagtgttaacttcaccagaaaagtcattctc 135  Q
    |||||||||||| || |||| ||||||||||    
T  23761125 tagtgttaactttacaagaatagtcattctc 23761095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 36493763 - 36493897
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||||| ||||| ||||||||||| || |||||||||| ||||||||    ||||||| | | ||| |||  |||||| ||||||||    
T  36493763 atgaattgatgatactatggggactgaacttttgatgtcactgtacaaacaatggggtgt----tactcactatatttttgatggtatagtattaacttc 36493858  T
Q  118 accagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||| |||||| ||| || ||| ||||||||||||||||    
T  36493859 accaaaaaagttattttcatgacttcaccatagaatttt 36493897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 33341547 - 33341397
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaa-cactttcgatact 103  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||| | |    |||| || ||| |||  |    
T  33341547 tcttgttaatctgatgaattgatgatactatg-ggactgaacttttgatgccactgtacaaacagtggggtgtt-cctcgcaacaatcaattttgatgat 33341450  T
Q  104 atagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||| |||||||||||| |||||||| ||| ||||| ||||||||||    
T  33341449 atagtgttaatttcaccagaaaaatcattctcatgacttcactatagaatttt 33341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 30002705 - 30002836
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||| |  |||| ||||||||||| || |||||||||| || ||||||||    |||||||||||| ||| ||| ||||||||||||||||||    
T  30002705 tgatgatactaagaagactgaacttttgatgtcactgtacaaacagtgaggtgttac----tcacaacacttttgatgctacagtgttaacttcaccaga 30002800  T
Q  124 aaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||| ||||| |  ||| ||||||||||| |||||||    
T  30002801 aaaatcattttaatgacttcaccatagagttttcct 30002836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 32592242 - 32592119
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||||| ||||||||||| || | |||||||| ||| ||||    ||||| ||||||||| ||||||     
T  32592242 tcttgttaatctgatgaattgatgatactaaggggactgaacttttgatgtcactatacaaacagtggagtgt----tactctcaacacttttgatactg 32592147  T
Q  105 tagtgttaacttcaccagaaaagtcatt 132  Q
    |||||||||||||| || ||||||||||    
T  32592146 tagtgttaacttcatcaaaaaagtcatt 32592119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 4205221 - 4205115
Alignment:
Q  49 ttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccat 148  Q
    |||||| ||||||||||||| ||||||||||     ||| |||| ||| |||| |||||||||||||||| ||||||||||||| || ||| ||||||||    
T  4205221 ttgatgtcattgtacaaacagtggggtgttat----tcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccat 4205126  T
Q  149 agaattttcct 159  Q
    |||||||||||    
T  4205125 agaattttcct 4205115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 42199880 - 42199727
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| || || ||||||| ||| |||| |||||| | |||||| ||||    |||  ||| ||| |||      
T  42199880 agtcttgttaatctgatgaattgatgatactatgagggctgaactttttatgtcattctacaaataatggggtattac----tcattacatttttgatgt 42199785  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||| |||||||||||| |||| |||||||  ||||||||||||||| ||||||||    
T  42199784 tatagtattaacttcaccaaaaaaatcattcttatgatttcaccatagatttttccta 42199727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 35025669 - 35025801
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||| | ||||| ||||||||||| ||  ||| ||||| |||||||     ||||||| ||||||| ||| |||||||||| |||||||||||    
T  35025669 tgatgatactacgaggactgaacttttgatgtcaacgtataaacagtggggtg----ctactcactacacttttgatgctatagtgttgacttcaccaga 35025764  T
Q  124 aaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||| ||||| || ||| |||| |||||||||||||||    
T  35025765 aaaatcattttcatgacttcagcatagaattttccta 35025801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 34361566 - 34361703
Alignment:
Q  17 gatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaactt 116  Q
    ||||||||||||||| |||| || || ||||||| ||| |||| |||||||| |||||||||||    |||  ||| |||  ||  ||||||||||||||    
T  34361566 gatgaattgatgatattatgagg-ctgaacttttaatgtcattctacaaacagtggggtgttac----tcattacattttttatgttatagtgttaactt 34361660  T
Q  117 caccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||| ||||||||||||  ||| |||||||||||||||||||    
T  34361661 caccaaaaaagtcattcttatgacttcaccatagaattttcct 34361703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 879608 - 879761
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||||||||  || | ||||||||||| ||||||||||||| || |||||    ||||||  ||| ||| |||      
T  879608 agtcttgttaatctgatgagttgatgatactatgaagattaaacttttgatgtcattgtacaaacaatgaggtgt----tactcattacatttttgatgt 879703  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||||||| ||||||||| |||| | |||||| ||| |||||| || ||||||||||    
T  879704 tatagtgtttacttcaccaaaaaaattattctcatgacttcaccttaaaattttccta 879761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 37775816 - 37775670
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||    |||||||||||||| |||||||||| ||||||||    ||||||||||| |||  ||| ||    
T  37775816 tcttgttaatctgatgaattgatgatactaagggggg--aacttttgatgccactgtacaaacagtggggtgt----tactcacaacatttttaatatta 37775723  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    ||||| ||||||||||| |||| ||||| |  ||| |||||| ||||||||||    
T  37775722 tagtgctaacttcaccaaaaaaatcattttaatgacttcaccgtagaattttc 37775670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 32912652 - 32912792
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    ||||| ||||||||||| |||| |  || ||||||||||  |||| |||||| ||| |||||||||    |||  ||| ||| |||  ||||||||||||    
T  32912652 ctgataaattgatgatattatgagtgctgaacttttgatatcattctacaaatactagggtgttac----tcattacatttttgatgttatagtgttaac 32912747  T
Q  115 ttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||| ||||||||||||  ||| |||||||||||||||||||    
T  32912748 ttcaccaaaaaagtcattcttatgacttcaccatagaattttcct 32912792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 5048024 - 5048174
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||| ||||||||||||||||||| | ||| ||||||||||  ||| ||||||||| || |||    | ||||||| ||||||| |||     
T  5048024 cagtcttgttaatctcatgaattgatgatactatgggaactgaacttttgatatcatcgtacaaacagtgtggt----cctactcactacacttttgatg 5048119  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
     ||||| ||| |||||||||||||| |||||||| | | ||||  ||||||||||    
T  5048120 ttatagagttgacttcaccagaaaaatcattctcataacttcattatagaatttt 5048174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 38812260 - 38812309
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcct 38812309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 17272066 - 17272010
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||||||||||||||| |  || |||||||||||||||||||    
T  17272066 tatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaattttcct 17272010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20097485 - 20097537
Alignment:
Q  104 atagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  20097485 atagggttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 4934262 - 4934333
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactgggg 74  Q
    |||||| ||| ||||||||| ||||||||||||| ||| | |||||||||||||| |||||||||| |||||    
T  4934262 agtcttgttaatctgatgaaatgatgatactatgaggattgaacttttgatgccagtgtacaaacaatgggg 4934333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 50764879 - 50764746
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||| ||||||||||||||||||| ||| | ||||||||||| ||  ||||||||| ||||||||    ||||||||||||||| |||        
T  50764879 tcttgttaatctaatgaattgatgatactatgaggattgaacttttgatgtcaccgtacaaacagtggggtgt----tactcacaacacttttgat--gt 50764786  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttca 144  Q
    |||||||||||||| || |||||| |||||| ||| ||||    
T  50764785 tagtgttaacttcatcaaaaaagttattctcatgacttca 50764746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 9139396 - 9139246
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| |||||||||||||| ||| | ||||||| ||| || |||||||||  |||||||||||  |||      | |||  || |    
T  9139396 agtcttgttaatctgatgagttgatgatactatggggattgaactttttatgtcactgtacaaacggtggggtgttactcact------attttttatgc 9139303  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||  ||||||||||||| |||||||| | || ||| |||||||||||||||||||    
T  9139302 tataacgttaacttcaccaaaaaagtcaatttcatgacttcaccatagaattttcct 9139246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 52516652 - 52516599
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||    
T  52516652 tatagtgttaacttcaccataaaagtcattctcatgacttcaccataaaatttt 52516599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 3042666 - 3042610
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||| |||| ||||| |  |||||||||||||||||||||||    
T  3042666 tatagtgttaacttcaccaaaaaaatcatttttatgatttcaccatagaattttcct 3042610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 38811861 - 38811813
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  38811861 ttaacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 38811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 6864186 - 6864123
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaa 66  Q
    |||||| ||| |||||| |||||||||||||||| |||||  ||||||||||| ||||||||||    
T  6864186 agtcttgttaatctgataaattgatgatactatgaggactggacttttgatgctattgtacaaa 6864123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 33816595 - 33816747
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||| ||||||||||||||||  |||| ||||||||||||||  ||| ||| | || ||||     ||||||| ||||||| ||| |||    
T  33816595 tcttgttaatctgataaattgatgatactatggagactgaacttttgatgccaccgtataaatagtgaggtg----ctactcactacacttttgatgcta 33816690  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
     | |||| |||||||||||||| |||||||| ||| || | |||| |||||| ||||    
T  33816691 caatgttgacttcaccagaaaaatcattctcatgacttaagcatataatttttctat 33816747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 2704560 - 2704511
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||||||| || ||| ||||||||| |||||||||    
T  2704560 ttaacttcaccagaaaagtcattttcatgacttcaccataaaattttcct 2704511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 7152241 - 7152318
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||| | ||||| |||  |||| ||||||||| |||||||||||||||  | ||| |||||||||||||||||||    
T  7152241 tactcactatacttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccatagaattttcct 7152318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 51204633 - 51204580
Alignment:
Q  104 atagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    |||| |||||||||||||||||||||||| |  ||| |||||||||||||||||    
T  51204633 atagggttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 51204580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 33255547 - 33255501
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||| |||||| |||||||||| ||||||||| ||||||    
T  33255547 ttaacttcaccaaaaaagtgattctcgtgacttcaccatataatttt 33255501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 47073656 - 47073706
Alignment:
Q  109 gttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||| |||||||||| || ||| || ||||||||||||||||    
T  47073656 gttaacttcaccaaaaaagtcattatcatgactttaccatagaattttcct 47073706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 32579520 - 32579443
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||  |||||| |||  |||| |||| |||||||||||||||||||||||   | ||||||||| |||||||||    
T  32579520 tactcactgcacttttgatgttataatgttgacttcaccagaaaagtcattctcagaacttcaccataaaattttcct 32579443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 46888228 - 46888338
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||| | |||| |||| ||||| |||||||||||||  |||||||| | |||||| |    ||||||| ||| ||| |||  |||||| ||||    
T  46888228 tctgatgaattaacgatagtatggggactgaacttttgatgccgctgtacaaatagtggggtat----tactcactacaattttgatgttatagtattaa 46888323  T
Q  114 cttcaccagaaaagt 128  Q
    ||||| |||||||||    
T  46888324 cttcatcagaaaagt 46888338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 50697392 - 50697316
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| ||||||||||||||||||||| | | | | ||||||||||| ||||||||||||  | |||||||||    
T  50697392 agtcttgttaatctgatgaattgatgatacta-gagaattgaacttttgatgtcattgtacaaacggtagggtgttac 50697316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 4396381 - 4396325
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||| | |||||||||| |  ||| ||||| |||||||||||||    
T  4396381 tatagtgttaacttcactaaaaaagtcatttttatgacttcactatagaattttcct 4396325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 6864090 - 6864038
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattt 155  Q
    ||||||| ||||||||||| ||||||||||||| |||  |||||||| |||||    
T  6864090 tatagtgataacttcaccaaaaaagtcattctcatgacatcaccatacaattt 6864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 15752176 - 15752027
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||    ||||||| | | |||  ||      
T  15752176 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgccattgtacaaacagtgaggtgt----tactcactatattttttatgt 15752081  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  15752080 tatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 15752027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 38823359 - 38823210
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||| | ||||||||||| || |||||||| | |||||||||||    || ||||| ||| ||| |||    
T  38823359 tcttgttaatctgatgaattgatgatactatggggattgaacttttgatgacactgtacaaatagtggggtgttac----tcgcaacaattttgatgcta 38823264  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  38823263 tagtgttaacttaaccagaaaagtcattctcatgacttcaccatagaattttcc 38823210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 47279334 - 47279196
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||| ||||||||    ||||||||||||||| |||| ||    
T  47279334 tcttgttaatctgatgaattgatgatactatgaggactgaactttcgatgccactgtacaaacagtggggtgt----tactcacaacacttttgatagta 47279239  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcacca 147  Q
    || |||||||||||||| |||| |||||||| ||| |||||||    
T  47279238 taatgttaacttcaccaaaaaaatcattctcatgacttcacca 47279196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 16415793 - 16415640
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactg-gggtgttacgtactcacaacactttcgata 101  Q
    |||||| ||| ||| |||||||||||||||||||  | || |||||||||||||| |||||||||| |  |||||||||    |||| ||||||| |||     
T  16415793 agtcttgttaatctaatgaattgatgatactatgatggctgaacttttgatgccactgtacaaacatttagggtgttac----tcactacacttttgatg 16415698  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  16415697 ctatagtgttaacttcaccagaaaagtcattctcatgacttcaccttagaattttcct 16415640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 2959894 - 2959742
Alignment:
Q  4 gtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatact 103  Q
    ||||| ||| |||||||||||||||| |||||| ||||| ||||||||||| || |||||||||| |||| |||||| ||||    ||| ||| |||  |    
T  2959894 gtcttgttaatctgatgaattgatgacactatgaggactgaacttttgatgtcactgtacaaacagtgggatgttacttact----acagttttgatgtt 2959799  T
Q  104 atagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||||||||||||| ||||||||||||| || ||| ||||||||||||||||||||    
T  2959798 atagtgttaacttcatcagaaaagtcattttcatgacttcaccatagaattttccta 2959742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 11742394 - 11742531
Alignment:
Q  17 gatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaactt 116  Q
    ||||||||||||||| |||| ||||| ||||||||||| || |||||||||| ||||||||||| |||    |||||||| |||| ||||||||||||||    
T  11742394 gatgaattgatgatattatg-ggactgaacttttgatgtcactgtacaaacagtggggtgttacttac----aacacttttgataatatagtgttaactt 11742488  T
Q  117 caccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||||| | | ||||| ||| |||||||||    
T  11742489 caccagaaaagtcattctcataacttcacgataaaattttcct 11742531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 3309292 - 3309144
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||  || | |||||||||| ||| |||||||||| | ||||||    ||||||||||||||| |||  ||    
T  3309292 tcttgttaatctgatgaattgatgatactatgaagattgaacttttgataccactgtacaaacagt-gggtgt----tactcacaacacttttgatgtta 3309198  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||||| |||||||||||||||||| ||| || |||||||||||||||    
T  3309197 tagtgttaactttaccagaaaagtcattctcatgactttaccatagaattttcc 3309144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 1547413 - 1547282
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||||| | ||| |||||||||||||| || ||||||| ||| |||||||    |||||||| |||  ||  |||||||||||||||||||||    
T  1547413 tgatgatactatgagaactgaacttttgatgccactgcacaaacagtggagtgttac----tcacaacattttttatgttatagtgttaacttcaccaga 1547318  T
Q  124 aaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||| ||| |||||||||||||||||||    
T  1547317 aaagtcattctcatgacttcaccatagaattttcct 1547282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 27533011 - 27533137
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||| | |||||||||||||| |||||||| | |||| ||||||     ||||| ||||| ||| |||    
T  27533011 tcttgttaatctgatgaattgatgatactatggggattgaacttttgatgccactgtacaaagagtgggttgttacc----cacaatacttttgatgcta 27533106  T
Q  105 tagtgttaacttcaccagaaaagtcattctc 135  Q
    |||||||||||||||||||||||||||||||    
T  27533107 tagtgttaacttcaccagaaaagtcattctc 27533137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 39393528 - 39393378
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||| ||||||||||| ||| | |||||||||||||| |||||||||| ||  || ||||    |||||||||||| ||| |||    
T  39393528 tcttgttaatctgatgaatttatgatactatggggattaaacttttgatgccactgtacaaacaatgaagtattac----tcacaacacttttgatgcta 39393433  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||  ||||||||||||||| | | |||||| ||||||||||||    
T  39393432 tagtgttaacttcattagaaaagtcattctcataacttcaccgtagaattttcct 39393378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 48620782 - 48620632
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||||| ||||||||||| || |||||||||| ||||||||    ||||||||||||||| |||  ||    
T  48620782 tcttgttaatctgatgaattgatgatactaaggggactgaacttttgatgtcactgtacaaacagtggggtgt----tactcacaacacttttgatgtta 48620687  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    || |||||||||||| |||||||||||| |  | | |||| ||||||||||||||    
T  48620686 tattgttaacttcacaagaaaagtcattttaataacttcaacatagaattttcct 48620632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 7079105 - 7079254
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacg-------tactcacaacactttcgatactatagt 108  Q
    |||||||||||||||||||||  |||| ||||||||||| ||||||||||||| || |||||||         ||||||||||||||| |||| ||||||    
T  7079105 tgatgaattgatgatactatgatgactgaacttttgatgtcattgtacaaacagtgaggtgttagtggggtgttactcacaacacttttgatattatagt 7079204  T
Q  109 gttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||| |||||||||| || ||| || |||||| ||||||||    
T  7079205 gttaacttcaccaaaaaagtcattatcatgactttaccataaaattttcc 7079254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 238544 - 238690
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||| ||||| |||||||||| ||||| ||||||||||| ||||||||||||| |||  ||||||    |||||||| |||  ||||||    
T  238544 tcttgttagtctgattaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtgga-tgttac----tcacaacatttttaatacta 238638  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||||||||||||||| |||||| ||| |||||| ||||| ||||||||||    
T  238639 tagtgttaacttcaccaaaaaagttattttcgtgacttcactatagaatttt 238690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 10922874 - 10922724
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| |||||||||||||| ||| | ||||||||||| ||||||||||||| ||||||    | ||||||  ||| |||  ||      
T  10922874 agtcttgttaatctgatgagttgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggggt----cttactcattacattttttatgt 10922779  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||| |||||||    
T  10922778 tatagtgttaacttcaccaaaaaaatcattctcatgatttcaccataaaattttc 10922724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 18422796 - 18422644
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||  ||||||||    |||||   | | ||| |||  ||    
T  18422796 tcttgttaatctgatgaattgatgatattatgaggactgaacttttgatgtcattgtacaaacggtggggtgt----tactcgttatatttttgatgtta 18422701  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctat 161  Q
    ||||||||||||||||| |||||||||| |  ||| |||||||||||||||||||||    
T  18422700 tagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcctat 18422644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 14758189 - 14758038
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||| |||||||||||| |||||| ||||| ||||||||||||||  ||||||||| | | ||| |||    |||| ||||||| |||     
T  14758189 cagtcttgttaatctaatgaattgatgaaactatggggactgaacttttgatgccaccgtacaaacagttgtgtgctac----tcactacacttttgatg 14758094  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttc 157  Q
     ||||||||| ||||||||||||||||||||||| ||| |||||| || |||||||    
T  14758093 ttatagtgttgacttcaccagaaaagtcattctcatgacttcaccgtaaaattttc 14758038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 10182039 - 10182189
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||| ||| ||||||||    ||| | | |||  ||  ||    
T  10182039 tcttgttaatctgatgaattgacgatactatgaggactgaacttttgatgccactgtacaaacagtggcgtgttacg----cactatattttttatgtta 10182134  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
     ||| |||||||||||| |||||||||| || ||| |||||||||||||||||||    
T  10182135 cagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcct 10182189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 31621581 - 31621733
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| ||||| || |||||||||||  ||||||| |  ||||||     ||||||  |||| || |||     
T  31621581 cagtcttgttaatctgatgaattgatgatactatggggactgaatttttgatgccaccgtacaaatagcggggtg----ctactcaatacacctttgatg 31621676  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
     ||||||||| ||||||| ||||||||||||||| ||| |||||| |||||||||||    
T  31621677 ttatagtgttgacttcactagaaaagtcattctcatgacttcaccgtagaattttcc 31621733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 15168244 - 15168084
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgc-------cattgtacaaacactggggtgttacgtactcacaacact 94  Q
    ||||||| ||| ||||||||||||||||||||||| ||||| ||||||||||||       ||  ||||||||| |||||||     ||||||| |||||    
T  15168244 cagtcttgttaatctgatgaattgatgatactatggggactgaacttttgatgccaccgtacaacgtacaaacagtggggtg----ctactcactacact 15168149  T
Q  95 ttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    || ||| |||||||||| ||||||||||||||  ||||||| | | ||||| |||||||||||||    
T  15168148 tttgatgctatagtgttgacttcaccagaaaaagcattctcatcacttcacgatagaattttcct 15168084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 34012408 - 34012558
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| ||||  |||| |||||||||||||| | |||||||| ||| ||||    ||||||| ||| | | |||  ||    
T  34012408 tcttgttaatctgatgaattgatgatagtatgatgactgaacttttgatgccactttacaaacagtggagtgt----tactcactacagtgttgatgtta 34012503  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||| || ||| |||||| || ||| |||||||||||||||||||    
T  34012504 tagtgttaacttcatcataaacgtcattttcatgacttcaccatagaattttcct 34012558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 37618932 - 37619077
Alignment:
Q  14 tctgatgaattgatgata--ctatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgtt 111  Q
    ||||||||||||||||||  ||||| | ||| ||||||||||| |||| |||||||| |||||||||   ||||||  | | ||| |||  |||||||||    
T  37618932 tctgatgaattgatgatatactatgagaactgaacttttgatgtcattttacaaacagtggggtgttt--tactcattaaatttttgatgttatagtgtt 37619029  T
Q  112 aacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||| ||||||||||||  | | |||||||||||||||||||    
T  37619030 aacttcaccaaaaaagtcattcttataacttcaccatagaattttcct 37619077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 21289808 - 21289661
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactt-------tcgatactata 106  Q
    ||||||||||||||||||||||  ||||| |||||||||||||| |||||||||| ||||||||    ||||||| ||| ||       |  ||  ||||    
T  21289808 tctgatgaattgatgatactatagggactgaacttttgatgccactgtacaaacagtggggtgt----tactcactacattttttattatttatgatata 21289713  T
Q  107 gtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||| ||||||    
T  21289712 gtgttaacttcaccagaaaagtcattctcatgacttcacaatagatttttcc 21289661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 47682523 - 47682673
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggg-gtgttacgtactcacaacactttcgata 101  Q
    |||||| ||| ||||||||||||||||||||||| ||| | |||||||||| ||| ||||||| || |||| ||||    ||||||||||| |||  ||     
T  47682523 agtcttgttaatctgatgaattgatgatactatgaggaatgaacttttgataccactgtacaagcagtgggagtgt----tactcacaacattttttatg 47682618  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |  ||||||||||||||||| |||||||| |||| ||| ||||||||| ||||||||    
T  47682619 c--tagtgttaacttcaccaaaaaagtcactctcatgacttcaccataaaattttcc 47682673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 15383080 - 15382928
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||| |  |||| ||||||||||| ||||||||||||  |||| |||    ||||||  ||| ||| |||      
T  15383080 agtcttgttaatctgatgaattgatgatactacgatgactgaacttttgatgacattgtacaaacggtgggatgt----tactcattacatttttgatgt 15382985  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||| ||||||| |||||||||| |  | | |||||||||||||||||||    
T  15382984 tatagtgttaatttcaccaaaaaagtcatttttataacttcaccatagaattttcct 15382928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 19899810 - 19899950
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||||||||||||||||| ||  | |||||||||||||||| |||||||| || |||||    |||||   ||| ||| |||  ||||||||||||    
T  19899810 ctgatgaattgatgatactatgagggttgaacttttgatgccattctacaaacagtgaggtgt----tactcgttacatttttgatgttatagtgttaac 19899905  T
Q  115 ttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||| |||| ||||| |  ||| |||||||||||||||||||    
T  19899906 ttcaccaaaaaaatcattattatgacttcaccatagaattttcct 19899950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 4330429 - 4330298
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacact-ggggtgttacgtactcacaacactttcgat 100  Q
    ||||||| ||| |||||| ||||||||||||||||  |||| |||||||||| ||| |||||||||| | |||||||    ||||||| ||||||| |||    
T  4330429 cagtcttgttaatctgataaattgatgatactatgatgactgaacttttgatcccactgtacaaacattgggggtgt----tactcactacacttttgat 4330334  T
Q  101 actatagtg-ttaacttcaccagaaaagtcattctc 135  Q
     |||||||| ||| ||||| ||||||||||||||||    
T  4330333 gctatagtgtttatcttcatcagaaaagtcattctc 4330298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 9903083 - 9903218
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | |||||||||||||||| |||||||| | ||||||||||| || ||||||||||  |||||||    ||||||| ||| ||| |||      
T  9903083 agtcttgttaatttgatgaattgatgatagtatgtggattgaacttttgatgtcactgtacaaacagcggggtgt----tactcactacagttttgatgt 9903178  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgattt 142  Q
    |||||||||||||||| || |||||||||| || ||||||    
T  9903179 tatagtgttaacttcatcaaaaaagtcattttcatgattt 9903218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 42721186 - 42721035
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||| | |||||||||||  | |||||||||| ||||||||    ||||||| | | |||  ||      
T  42721186 agtcttgttaatctgatgaattgatgatactatggggattgaacttttgatgttactgtacaaacagtggggtgt----tactcactatattttttatga 42721091  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||| | ||||||||||| |||| ||||| || ||| ||||||||||||||||||    
T  42721090 tatagggctaacttcaccaaaaaaatcattttcatgacttcaccatagaattttcc 42721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 30254570 - 30254418
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||||| || ||||| ||||||||||| |||||||||||||     ||||    ||||||  ||| ||| |||      
T  30254570 agtcttgttaatctgatgaattgatgatactttgaggactgaacttttgatgtcattgtacaaaca-----gtgtgtattactcattacatttttgatgt 30254476  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||| ||||||||||| || ||||||||||||  | | ||||||||||||||||||||    
T  30254475 tatattgttaacttcaacaaaaaagtcattcttataacttcaccatagaattttccta 30254418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 32267179 - 32267029
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||  ||||||||| |||| ||| | ||||||||||| ||||||||||||| ||||||||    ||||||  ||| ||| |||  ||    
T  32267179 tcttgttaatctgatgggttgatgataatatgaggagtgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacatttttgatgtta 32267084  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    || |||||||||||| | ||||||||||||  ||| ||||||||| |||||||||    
T  32267083 tattgttaacttcacaaaaaaagtcattcttatgacttcaccataaaattttcct 32267029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 25160779 - 25160715
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaac 67  Q
    |||||| ||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  25160779 agtcttattaatctaatgaattgatgatactatgaggactgaacttttgatgccattgtacaaac 25160715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 27227516 - 27227579
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaaca 68  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  27227516 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgccactgtacaaaca 27227579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 27267228 - 27267376
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||||||||  |||| ||||||| |||||| |||||||||| ||||||||     |||||| ||| |||  || |    
T  27267228 agtcttgttaatctgatgaattgatgatactatggagactgaacttttaatgccactgtacaaacagtggggtgt----cactcactacattttttatgc 27267323  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
      ||||||||||||||||| |||| |||||||| ||| |||| |||| ||||||||    
T  27267324 --tagtgttaacttcaccaaaaaaatcattctcatgacttca-catataattttcc 27267376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 32216187 - 32216088
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||| | ||||| ||||||||| ||||||||||||||| ||| ||||    ||||||| ||| ||| |||  |||||||||||||||    
T  32216187 atgaattgatgatactacgaggactgaacttttgacgccattgtacaaacagtggtgtgt----tactcactacatttttgatgttatagtgttaacttc 32216092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 3535077 - 3534927
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||| ||| || | ||||| ||||||||||| || || ||||||| |  |||||    ||||||||||||||| |||  ||    
T  3535077 tcttgttaatctgatgaattgataatattaaggggactgaacttttgatgtcactgcacaaacagtaaggtgt----tactcacaacacttttgatgtta 3534982  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||| |||||| | |||||  ||| ||||  |||||||||||||    
T  3534981 tagtgttaacttcactagaaaattaattctaatgacttcataatagaattttcct 3534927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 28564810 - 28564875
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaaca 68  Q
    |||||| ||| | ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  28564810 agtcttgttaatatgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaaca 28564875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 22170805 - 22170749
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||||||||||||||  |||||||||||| || |||||||||||||||||||||||    
T  22170805 tatagtgttaacttcattagaaaagtcattttcatgatttcaccatagaattttcct 22170749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 40884958 - 40884841
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||| ||||||||  ||||| ||||||||||||||  ||||||||| |||||||     ||||||| ||||||| |||  ||    
T  40884958 tcttgttaatctgatgaattgaagatactatagggactgaacttttgatgccaccgtacaaacagtggggtg----ctactcactacacttttgatgtta 40884863  T
Q  105 tagtgttaacttcaccagaaaa 126  Q
    | ||||| ||||||||||||||    
T  40884862 tggtgttgacttcaccagaaaa 40884841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 41926308 - 41926155
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||  ||||| ||||| |||||||| |||||||||| |||| | |    ||||||| | | ||| |||  ||    
T  41926308 tcttgttaatctgatgaattgatgatactatagggactgaacttgtgatgccactgtacaaacagtgggatat----tactcactatatttttgatgtta 41926213  T
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcctata 162  Q
    |||| ||||||||| || |||| ||||| || | | |||||||||||||||| |||||    
T  41926212 tagtattaacttcatcaaaaaaatcattttcataacttcaccatagaatttttctata 41926155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 30326992 - 30327132
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||||||||  |||| |||||||||||| |||||||||||  | |||| |    ||||||  ||| ||| |||  |||||||||||    
T  30326992 tctgatgaattgatgatactatgatgactgaacttttgatgctattgtacaaacggttgggtat----tactcattacatttttgatgttatagtgttaa 30327087  T
Q  114 cttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
     ||||| | |||||||||| |  ||| ||||| ||||||||||||    
T  30327088 attcacaaaaaaagtcatttttatgacttcactatagaattttcc 30327132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 27227604 - 27227657
Alignment:
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||| |||| |||||||| ||| ||||||||||||||||||    
T  27227604 tagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcc 27227657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 33725628 - 33725778
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| | ||||||||||||||||||||| ||||| ||||||||||||||    | ||| | |||| ||     ||||||  ||||||| |||     
T  33725628 cagtcttgttaatatgatgaattgatgatactatgaggactgaacttttgatgccaccaaagaaatagtgggctg----ctactcaatacacttttgatg 33725723  T
Q  102 ctatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
     ||||| ||| ||||||| ||||||||||||||| ||| || |||||||||||||    
T  33725724 atatagcgttgacttcactagaaaagtcattctcttgactttaccatagaatttt 33725778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 28769799 - 28769735
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaac 67  Q
    |||||| ||| | ||||||||||||||||||||| ||||  ||| ||||||||||||||||||||    
T  28769799 agtcttgttaatatgatgaattgatgatactatgaggaccgaacctttgatgccattgtacaaac 28769735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 43579290 - 43579242
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  43579290 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 43579242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 8222275 - 8222216
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgta 62  Q
    |||||| ||| | ||||||||||||||||||||| | ||| |||||||||||||||||||    
T  8222275 agtcttgttaatatgatgaattgatgatactatgagaactgaacttttgatgccattgta 8222216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 4150490 - 4150536
Alignment:
Q  113 acttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||    
T  4150490 acttcaccagaaaagtcattatcatgacttcaccatagaattttcct 4150536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 23999482 - 23999417
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||| |||||||| || || ||||||||||| |||| |||||| | |||||||||||    
T  23999482 ctgatgaattgataatactatgagggctgaacttttgatgtcattctacaaatagtggggtgttac 23999417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 30254909 - 30254852
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||||||||||||| || |||||||||| |  ||| ||||||||||||||||||||    
T  30254909 tatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaattttccta 30254852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 51129006 - 51128929
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| | ||||||||||||||||||||   |||| ||||||||||| ||||||||||||  ||| |||||||    
T  51129006 agtcttgttaatatgatgaattgatgatactataatgactgaacttttgatgtcattgtacaaacggtggagtgttac 51128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 37451432 - 37451308
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | |||| |||||||||||||| | ||||| ||||||||||| ||||||||||||  | ||||||||| || |    ||| ||| |||      
T  37451432 agtcttgttaatatgataaattgatgatacta-gaggactgaacttttgatgtcattgtacaaacggtagggtgttacttatt----acatttttgatgt 37451338  T
Q  103 tatagtgttaacttcaccagaaaagtcatt 132  Q
    |||||||||||||| |||| ||||||||||    
T  37451337 tatagtgttaactttaccaaaaaagtcatt 37451308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 13876919 - 13876969
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||||||||| |||||||||| || | | ||||||||||||||||||||    
T  13876919 ttaacttcaccataaaagtcattttcataacttcaccatagaattttccta 13876969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 16132523 - 16132473
Alignment:
Q  110 ttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    |||||||||||| |||||||| |||  ||| ||||||||||||||||||||    
T  16132523 ttaacttcaccaaaaaagtcaatctattgacttcaccatagaattttccta 16132473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 23999396 - 23999343
Alignment:
Q  105 tagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||| |||| |||||||  ||| ||||||||| ||||||||    
T  23999396 tagtgttaacttcaccaaaaaaatcattcttatgacttcaccataaaattttcc 23999343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 46931546 - 46931481
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||| |||| || || || |||||||||| || |||||||| |||||| ||||    
T  46931546 ctgatgaattgatgatattatgagggctgaatttttgatgccgttctacaaacagtggggtattac 46931481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 47279204 - 47279159
Alignment:
Q  113 acttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||| ||||||||||||| ||| ||||||||||| ||||||    
T  47279204 acttcaccaaaaaagtcattctcatgacttcaccatagatttttcc 47279159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 8038 - 7889
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||  ||| ||| |||      
T  8038 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacaattttgatgt 7943  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    |||||||||||||||| || ||||||||||||  | | ||||||||||||||||    
T  7942 tatagtgttaacttcatcaaaaaagtcattcttataacttcaccatagaatttt 7889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 44108 - 43959
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||  ||||||||||    |||  ||| ||| ||||     
T  44108 agtcttattaatctgatgaattgatgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttac----tcattacatttttgatat 44013  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||| ||||||||||||| ||||||| ||||   || ||||||||||||||||    
T  44012 tatagcgttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttt 43959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 154679 - 154828
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||  ||||||||||    |||  ||| ||| ||||     
T  154679 agtcttattaatctgatgaattgatgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttac----tcattacatttttgatat 154774  T
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaatttt 156  Q
    ||||| ||||||||||||| ||||||| ||||   || ||||||||||||||||    
T  154775 tatagcgttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttt 154828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 12058 - 11908
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattg-tacaaacact-ggggtgttacgtactcacaacactttcgatac 102  Q
    |||| ||| |||||||||||||||||| |||| ||||| |||||||||| ||| || |||||||| | |||||||    |||||||||||||||  ||      
T  12058 tcttgttaatctgatgaattgatgatattatgaggactgaacttttgataccactgatacaaacaatgggggtgt----tactcacaacacttttaatgt 11963  T
Q  103 tatagtgttaacttcaccagaaaagtca-ttctcgtgatttcaccatagaatttt 156  Q
    ||| ||||||| |||||||||||||||| ||||| ||| ||||||||||||||||    
T  11962 tatggtgttaatttcaccagaaaagtcatttctcatgacttcaccatagaatttt 11908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 42424 - 42346
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttccta 160  Q
    ||||||||||||||| |||  |||||||||||||||||||||||| | |||||| ||| ||||||||| ||||||||||    
T  42424 tactcacaacacttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataaaattttccta 42346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 100876 - 100820
Alignment:
Q  103 tatagtgttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcct 159  Q
    ||||| ||||||||||||| |||| |||||||| ||| |||||||||||||||||||    
T  100876 tatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcct 100820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 12137 - 12186
Alignment:
Q  109 gttaacttcaccagaaaagtcattctcgtgatttcaccatagaattttcc 158  Q
    ||||||||||||||||||||||||||| | | |||| |||||||||||||    
T  12137 gttaacttcaccagaaaagtcattctcataacttcatcatagaattttcc 12186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 146062 - 146127
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||||||||  | || ||||||||||| |||| |||||| | |||||||||||    
T  146062 ctgatgaattgatgatactatgaaggctgaacttttgatgtcattctacaaataatggggtgttac 146127  T

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