View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19832_high_8 (Length: 252)
Name: NF19832_high_8
Description: NF19832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19832_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 33461375 - 33461613
Alignment:
| Q |
1 |
cttatgtatatacctacacctataatagtcagtgatacggggaaacgacaacacatggtagaatctataggatcaaggtcatacaaaactttgtccctag |
100 |
Q |
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| T |
33461375 |
cttatgtatatacctacacctataatagtcagtgatatggggaaaggacaacacattgtagaatctataggatcaaggtcatacaaaactttgtccctag |
33461474 |
T |
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| Q |
101 |
cctaattctaaggnnnnnnnnctgctcataaatagttcatattgtcannnnnnnnngtcatgtatgtcaccccatatataac--atatattttggagctt |
198 |
Q |
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| T |
33461475 |
cctaattctaa-gaaaaaaaactgctcataaatagttcatattgtca-ttttttttgtcatgtatgtcaccccatatataacatatatattttggagctt |
33461572 |
T |
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| Q |
199 |
actcatgagtcacaatatttgtgatgttttgaagaaaatat |
239 |
Q |
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| T |
33461573 |
aatcatgagtcacaatatttgtgatgttttgaagaaaatat |
33461613 |
T |
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