View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19832_low_10 (Length: 257)
Name: NF19832_low_10
Description: NF19832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19832_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 46102706 - 46102936
Alignment:
| Q |
9 |
acatcatcataaatagaaactgcaagcaattaaaaacaatacaactaaattaatgaaattctatcttaaaattaaaatgattgatccaaaacaactaatg |
108 |
Q |
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| T |
46102706 |
acatcatcataaatagaaactgcaagcaattaaaaacaataaaactaaattaacgaaattctatcttaaaattaaaatgattgatccaaaacaactaatg |
46102805 |
T |
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| Q |
109 |
caaatagctacaattatagaaagtaaattatgaattaaactccaaatttagaaataaaatgagagaatgagagaaactaacgtagtagcataaacttgta |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46102806 |
caaatagctacaattatagaaagtaaattatgaattaaactccaaatttagaaataaaatgagagaatgagagaaactaacgtagtagcataaacttgta |
46102905 |
T |
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| Q |
209 |
gctgagaagctgaatcagtaaatgaaccatc |
239 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
46102906 |
gctgagaagctgaatcagtaaatgaaccatc |
46102936 |
T |
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