View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19832_low_5 (Length: 323)
Name: NF19832_low_5
Description: NF19832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19832_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 53992794 - 53992500
Alignment:
| Q |
1 |
tcactgcactgaactggagttggactaactgaatggtcacattcatttttgtaccactaaagtgatttcataagtacaaacctcctaggatctcgtagtg |
100 |
Q |
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| T |
53992794 |
tcactgcactgaactggagttggactaactgaatggtcacattcatttttgtaccactaaagtgatttcataagtacaaacctcctaggatctcgtagtg |
53992695 |
T |
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| Q |
101 |
gtaactctaccttataatttggtctgccactgtccattgataatgttaatattgtcctgtaaattttacgcatgctggctagctcctcttgataacatct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53992694 |
gtaactctaccttataatttggtctgccactgtccattgataatgttaatattgtcctgtaaattttacgcatgctggctagctcctcttgataacatct |
53992595 |
T |
|
| Q |
201 |
tccttattaactggaataacacattatttgcttcctctttgttgcttgatggatggcgggtggtggtggtgggggatctttccttaatttcaatg |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53992594 |
tccttattaactggaataacacattatttgcttcctctttgttgcttgatggatggcgggtggtggtggtgggggatctttccttaatttcaatg |
53992500 |
T |
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