View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19832_low_6 (Length: 311)
Name: NF19832_low_6
Description: NF19832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19832_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 17 - 305
Target Start/End: Complemental strand, 19413174 - 19412886
Alignment:
| Q |
17 |
agctttgaacggaattttctattcgatggtatatgtgtagaatactgcaaaaacaattatacaaaaattagttgatacagaatgtcaaatttatggtata |
116 |
Q |
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| T |
19413174 |
agctttgaacgaaattttctattcgatggtatatgtgtagaatactgcaaaaacaattatacaaaaattagttgatacagaatgtcaaatttatggtata |
19413075 |
T |
|
| Q |
117 |
tgatatttgcaacaagtgtagcatatgttaatttgtcaaattttgctaataatatttctagtcatatcttacaacatcttgtattcgattattatctcgt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19413074 |
tgatatttgcaacaagtgtagcatatgttaatttgtcaaattttactaataatatttctagtcatatcttacaacatcttgtattcgattattatctcgt |
19412975 |
T |
|
| Q |
217 |
ttactgatttccagagtccagttatttgctctgtcagccacgaaaaatctcctagattcaagtggagtaatatccccatcctttgcttc |
305 |
Q |
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|| |||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
19412974 |
ttgctgatttccatagtccagttatatgctctgtcagccaagaaaaatctcctagattcaagtggagtaatatccccatccttttcttc |
19412886 |
T |
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