View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19833_high_5 (Length: 386)

Name: NF19833_high_5
Description: NF19833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19833_high_5
NF19833_high_5
[»] scaffold0014 (2 HSPs)
scaffold0014 (90-337)||(203540-203787)
scaffold0014 (301-337)||(79327-79363)
[»] chr8 (56 HSPs)
chr8 (90-337)||(22526215-22526461)
chr8 (96-374)||(22984376-22984651)
chr8 (90-374)||(16800165-16800446)
chr8 (108-374)||(22996537-22996800)
chr8 (101-342)||(22183860-22184097)
chr8 (98-338)||(20501229-20501468)
chr8 (96-330)||(17085311-17085544)
chr8 (96-337)||(28398300-28398540)
chr8 (96-337)||(22252315-22252555)
chr8 (91-337)||(22385077-22385321)
chr8 (95-338)||(20532535-20532774)
chr8 (96-337)||(22245237-22245477)
chr8 (95-336)||(22418588-22418825)
chr8 (96-342)||(40492023-40492268)
chr8 (96-344)||(2417996-2418241)
chr8 (196-330)||(17085077-17085210)
chr8 (99-337)||(19928758-19928996)
chr8 (151-337)||(17266144-17266328)
chr8 (104-269)||(37516426-37516592)
chr8 (96-338)||(14102351-14102591)
chr8 (115-337)||(22365386-22365606)
chr8 (124-344)||(19154005-19154224)
chr8 (245-338)||(17460207-17460299)
chr8 (232-348)||(24353912-24354027)
chr8 (231-344)||(17438657-17438770)
chr8 (159-338)||(7464903-7465082)
chr8 (110-256)||(21999518-21999665)
chr8 (270-337)||(26220556-26220622)
chr8 (270-337)||(26222331-26222397)
chr8 (218-341)||(45289757-45289882)
chr8 (110-215)||(34951257-34951362)
chr8 (96-185)||(39834389-39834478)
chr8 (269-337)||(13507232-13507299)
chr8 (269-337)||(13596764-13596831)
chr8 (236-338)||(19936239-19936339)
chr8 (115-215)||(21330656-21330756)
chr8 (245-337)||(23661257-23661347)
chr8 (96-337)||(5609843-5610084)
chr8 (300-338)||(14396910-14396948)
chr8 (127-256)||(21979547-21979677)
chr8 (236-337)||(24049351-24049452)
chr8 (269-338)||(982578-982647)
chr8 (241-337)||(22966810-22966906)
chr8 (301-338)||(39834569-39834606)
chr8 (110-215)||(44474816-44474921)
chr8 (99-270)||(13660921-13661093)
chr8 (99-270)||(13719564-13719736)
chr8 (269-337)||(21697416-21697484)
chr8 (300-340)||(25483439-25483479)
chr8 (310-374)||(19807355-19807421)
chr8 (218-337)||(22002582-22002703)
chr8 (99-154)||(43112843-43112898)
chr8 (254-336)||(20404039-20404120)
chr8 (90-127)||(22010091-22010128)
chr8 (228-280)||(23948205-23948258)
chr8 (285-337)||(20499505-20499557)
[»] chr6 (45 HSPs)
chr6 (96-369)||(22792399-22792668)
chr6 (96-344)||(19363178-19363422)
chr6 (95-374)||(18895447-18895724)
chr6 (90-337)||(17229064-17229309)
chr6 (96-378)||(20137386-20137666)
chr6 (96-378)||(22195203-22195483)
chr6 (95-338)||(33443776-33444015)
chr6 (99-337)||(18453942-18454179)
chr6 (156-338)||(18697302-18697483)
chr6 (141-374)||(20224723-20224950)
chr6 (141-374)||(22118707-22118934)
chr6 (99-344)||(23527293-23527538)
chr6 (200-338)||(18707097-18707234)
chr6 (96-344)||(18198577-18198823)
chr6 (302-374)||(18231684-18231756)
chr6 (146-337)||(19669183-19669372)
chr6 (245-338)||(14978542-14978633)
chr6 (245-338)||(25618899-25618990)
chr6 (127-237)||(22375900-22376010)
chr6 (218-337)||(17882710-17882830)
chr6 (96-340)||(19024107-19024350)
chr6 (156-237)||(20183590-20183671)
chr6 (156-237)||(22152320-22152401)
chr6 (226-341)||(13612320-13612435)
chr6 (245-341)||(20556030-20556124)
chr6 (118-253)||(25739154-25739290)
chr6 (270-337)||(16447754-16447820)
chr6 (156-235)||(16966637-16966716)
chr6 (270-336)||(21119807-21119872)
chr6 (254-378)||(23539800-23539922)
chr6 (270-337)||(3850996-3851062)
chr6 (156-338)||(9097650-9097832)
chr6 (270-337)||(19102462-19102528)
chr6 (236-338)||(23992970-23993072)
chr6 (115-344)||(23077454-23077682)
chr6 (300-338)||(23415916-23415954)
chr6 (300-338)||(27557677-27557715)
chr6 (300-337)||(8226740-8226777)
chr6 (300-337)||(17201080-17201117)
chr6 (300-337)||(23531896-23531933)
chr6 (96-185)||(28103600-28103689)
chr6 (310-341)||(19005963-19005994)
chr6 (99-174)||(23620386-23620461)
chr6 (110-215)||(9621664-9621769)
chr6 (219-279)||(19772724-19772785)
[»] chr1 (44 HSPs)
chr1 (95-344)||(21683707-21683955)
chr1 (98-337)||(22777176-22777414)
chr1 (95-342)||(47191312-47191558)
chr1 (95-338)||(48521222-48521464)
chr1 (96-337)||(22125010-22125250)
chr1 (96-338)||(52940026-52940267)
chr1 (96-337)||(20958840-20959081)
chr1 (96-337)||(21042505-21042745)
chr1 (96-337)||(27652392-27652631)
chr1 (146-337)||(35260280-35260471)
chr1 (96-337)||(41049172-41049412)
chr1 (156-337)||(50613239-50613419)
chr1 (156-337)||(50621067-50621247)
chr1 (99-342)||(12272304-12272544)
chr1 (245-338)||(13880537-13880628)
chr1 (261-341)||(20453632-20453711)
chr1 (115-338)||(50687342-50687563)
chr1 (96-340)||(21342803-21343046)
chr1 (96-340)||(21347668-21347911)
chr1 (96-185)||(35981041-35981130)
chr1 (234-369)||(14801339-14801473)
chr1 (234-369)||(14810213-14810347)
chr1 (218-378)||(51083105-51083266)
chr1 (218-378)||(14237615-14237776)
chr1 (236-346)||(16274564-16274674)
chr1 (159-337)||(16759467-16759645)
chr1 (156-341)||(21857084-21857269)
chr1 (300-338)||(22130025-22130063)
chr1 (271-337)||(26065847-26065913)
chr1 (228-337)||(42697726-42697836)
chr1 (231-280)||(45755465-45755515)
chr1 (241-337)||(40390150-40390246)
chr1 (301-338)||(43629296-43629333)
chr1 (300-337)||(45574020-45574057)
chr1 (269-337)||(13212192-13212260)
chr1 (236-338)||(15859316-15859416)
chr1 (269-344)||(25262226-25262301)
chr1 (236-337)||(14294728-14294828)
chr1 (236-337)||(51131408-51131508)
chr1 (90-127)||(8761045-8761082)
chr1 (251-338)||(11946407-11946493)
chr1 (285-337)||(21473794-21473846)
chr1 (301-337)||(21841683-21841719)
chr1 (285-337)||(52927252-52927304)
[»] chr2 (29 HSPs)
chr2 (99-374)||(27845372-27845645)
chr2 (90-344)||(26393128-26393381)
chr2 (95-344)||(18546136-18546384)
chr2 (90-369)||(43946487-43946764)
chr2 (98-336)||(34137678-34137915)
chr2 (95-338)||(39827194-39827436)
chr2 (96-338)||(25109601-25109841)
chr2 (95-342)||(22458685-22458929)
chr2 (115-337)||(23005502-23005722)
chr2 (245-341)||(22172975-22173069)
chr2 (255-338)||(7187395-7187477)
chr2 (96-185)||(18786162-18786251)
chr2 (96-337)||(22412315-22412554)
chr2 (115-337)||(20519321-20519542)
chr2 (96-338)||(23792007-23792247)
chr2 (300-338)||(31346134-31346172)
chr2 (270-337)||(24941586-24941652)
chr2 (270-337)||(43138262-43138328)
chr2 (228-297)||(5986119-5986189)
chr2 (254-344)||(24682196-24682285)
chr2 (99-174)||(23375733-23375808)
chr2 (310-341)||(24528863-24528894)
chr2 (300-338)||(23079873-23079911)
chr2 (218-337)||(26506206-26506327)
chr2 (218-337)||(27919978-27920099)
chr2 (90-127)||(21917728-21917765)
chr2 (269-337)||(19672753-19672820)
chr2 (90-122)||(19688184-19688216)
chr2 (301-337)||(26508769-26508805)
[»] scaffold0914 (1 HSPs)
scaffold0914 (96-342)||(2458-2701)
[»] scaffold0004 (2 HSPs)
scaffold0004 (95-337)||(333047-333289)
scaffold0004 (115-174)||(204511-204570)
[»] chr7 (49 HSPs)
chr7 (95-342)||(11768085-11768330)
chr7 (95-344)||(11524792-11525040)
chr7 (99-338)||(37793391-37793627)
chr7 (96-337)||(42462683-42462923)
chr7 (96-337)||(129943-130182)
chr7 (95-338)||(16996903-16997145)
chr7 (96-327)||(9032526-9032755)
chr7 (95-342)||(17016592-17016835)
chr7 (96-348)||(14036930-14037180)
chr7 (96-348)||(14346960-14347210)
chr7 (146-337)||(15007649-15007839)
chr7 (110-237)||(15203003-15203130)
chr7 (96-337)||(12902080-12902321)
chr7 (115-338)||(1867232-1867453)
chr7 (245-338)||(18455589-18455680)
chr7 (205-334)||(38519602-38519732)
chr7 (115-338)||(14045521-14045742)
chr7 (115-338)||(14355551-14355772)
chr7 (96-342)||(15117201-15117444)
chr7 (151-342)||(16324738-16324926)
chr7 (272-374)||(17052723-17052826)
chr7 (270-337)||(10062883-10062949)
chr7 (159-337)||(12254995-12255172)
chr7 (110-237)||(13893271-13893398)
chr7 (270-337)||(3387452-3387518)
chr7 (104-270)||(9724868-9725035)
chr7 (159-337)||(16057068-16057246)
chr7 (236-338)||(23461632-23461734)
chr7 (270-337)||(48274487-48274553)
chr7 (254-344)||(9176828-9176916)
chr7 (98-342)||(15113677-15113918)
chr7 (124-198)||(20219517-20219591)
chr7 (300-337)||(1856401-1856438)
chr7 (300-337)||(13648296-13648333)
chr7 (300-337)||(13917573-13917610)
chr7 (300-337)||(19485973-19486010)
chr7 (218-337)||(27217689-27217809)
chr7 (300-337)||(42374305-42374342)
chr7 (269-337)||(2279321-2279389)
chr7 (300-336)||(25926301-25926337)
chr7 (99-154)||(16574059-16574114)
chr7 (99-154)||(16591548-16591603)
chr7 (157-270)||(14980736-14980850)
chr7 (157-270)||(15410212-15410326)
chr7 (90-127)||(13634892-13634929)
chr7 (301-338)||(17180528-17180565)
chr7 (219-279)||(32302159-32302220)
chr7 (282-338)||(9388917-9388973)
chr7 (293-337)||(47832683-47832727)
[»] chr3 (47 HSPs)
chr3 (87-342)||(15207641-15207892)
chr3 (99-316)||(15265897-15266111)
chr3 (91-374)||(23317900-23318181)
chr3 (95-338)||(9578356-9578598)
chr3 (96-277)||(15246773-15246952)
chr3 (108-338)||(13919595-13919821)
chr3 (99-338)||(11202036-11202274)
chr3 (108-342)||(32402177-32402411)
chr3 (96-275)||(37428426-37428606)
chr3 (156-338)||(324951-325131)
chr3 (98-338)||(319973-320210)
chr3 (230-337)||(44495482-44495588)
chr3 (231-337)||(43927952-43928058)
chr3 (156-279)||(14604734-14604857)
chr3 (96-338)||(21838186-21838426)
chr3 (146-337)||(37250317-37250507)
chr3 (96-185)||(1464785-1464874)
chr3 (245-341)||(50243773-50243867)
chr3 (142-209)||(14568727-14568794)
chr3 (146-338)||(12386199-12386382)
chr3 (270-337)||(21619386-21619452)
chr3 (259-338)||(24152385-24152463)
chr3 (270-341)||(36167535-36167605)
chr3 (110-253)||(16828364-16828508)
chr3 (96-337)||(22791973-22792214)
chr3 (159-341)||(52522925-52523107)
chr3 (300-338)||(5224337-5224375)
chr3 (300-338)||(16644975-16645013)
chr3 (219-336)||(22758835-22758953)
chr3 (300-338)||(26054434-26054472)
chr3 (300-337)||(22146768-22146805)
chr3 (300-337)||(37641504-37641541)
chr3 (300-337)||(52465371-52465408)
chr3 (269-337)||(1464633-1464701)
chr3 (269-337)||(19039485-19039552)
chr3 (270-338)||(45219411-45219477)
chr3 (159-337)||(2044856-2045034)
chr3 (159-337)||(2047585-2047763)
chr3 (99-174)||(30205772-30205847)
chr3 (236-346)||(55318615-55318725)
chr3 (212-337)||(23275492-23275616)
chr3 (218-337)||(45577655-45577776)
chr3 (218-337)||(55477319-55477440)
chr3 (90-127)||(326587-326624)
chr3 (300-337)||(13522202-13522239)
chr3 (300-337)||(43549659-43549696)
chr3 (219-279)||(43888813-43888874)
[»] scaffold0750 (1 HSPs)
scaffold0750 (96-374)||(4350-4628)
[»] scaffold0169 (1 HSPs)
scaffold0169 (95-338)||(28695-28936)
[»] scaffold0011 (1 HSPs)
scaffold0011 (96-338)||(37282-37522)
[»] chr5 (33 HSPs)
chr5 (90-348)||(26739786-26740043)
chr5 (96-374)||(20572577-20572849)
chr5 (90-332)||(26731989-26732230)
chr5 (96-333)||(25573581-25573817)
chr5 (96-337)||(23470503-23470744)
chr5 (97-332)||(25576010-25576244)
chr5 (97-332)||(25574817-25575051)
chr5 (95-344)||(21327416-21327653)
chr5 (96-337)||(23476214-23476456)
chr5 (2-94)||(7763030-7763122)
chr5 (190-337)||(31062149-31062293)
chr5 (146-374)||(22177310-22177536)
chr5 (96-337)||(27988105-27988344)
chr5 (245-341)||(22413047-22413141)
chr5 (230-337)||(41094818-41094925)
chr5 (96-185)||(21740897-21740986)
chr5 (226-337)||(14048929-14049040)
chr5 (270-337)||(18318184-18318250)
chr5 (310-348)||(21344442-21344480)
chr5 (236-344)||(24473815-24473923)
chr5 (270-337)||(20765230-20765296)
chr5 (236-337)||(41860581-41860682)
chr5 (218-337)||(38620263-38620384)
chr5 (300-338)||(40723459-40723497)
chr5 (300-337)||(40726695-40726732)
chr5 (269-337)||(24068257-24068325)
chr5 (226-297)||(25744601-25744673)
chr5 (236-337)||(36315396-36315496)
chr5 (300-337)||(18419466-18419503)
chr5 (236-336)||(32028766-32028866)
chr5 (301-337)||(263982-264018)
chr5 (254-338)||(15797311-15797394)
chr5 (269-337)||(26011236-26011304)
[»] scaffold0347 (1 HSPs)
scaffold0347 (96-342)||(9612-9858)
[»] scaffold0001 (4 HSPs)
scaffold0001 (108-342)||(447237-447470)
scaffold0001 (95-342)||(498134-498380)
scaffold0001 (128-237)||(498901-499010)
scaffold0001 (110-167)||(162393-162450)
[»] chr4 (40 HSPs)
chr4 (96-342)||(15792506-15792751)
chr4 (95-338)||(12841375-12841617)
chr4 (95-338)||(14852023-14852265)
chr4 (99-369)||(26790070-26790338)
chr4 (112-337)||(26049620-26049844)
chr4 (96-338)||(32306151-32306392)
chr4 (95-338)||(17334011-17334250)
chr4 (96-338)||(14825825-14826063)
chr4 (99-278)||(14651438-14651618)
chr4 (255-346)||(12611880-12611970)
chr4 (96-337)||(53081303-53081542)
chr4 (245-337)||(23802406-23802496)
chr4 (110-270)||(50160910-50161072)
chr4 (110-237)||(19739563-19739690)
chr4 (218-344)||(3485796-3485924)
chr4 (255-336)||(51463031-51463111)
chr4 (99-337)||(16043772-16044010)
chr4 (110-237)||(27996616-27996743)
chr4 (110-223)||(21189075-21189188)
chr4 (130-233)||(40907801-40907904)
chr4 (270-337)||(54797886-54797952)
chr4 (99-185)||(15100009-15100095)
chr4 (269-338)||(12287353-12287422)
chr4 (225-344)||(15489462-15489582)
chr4 (270-334)||(14281254-14281317)
chr4 (104-270)||(13591135-13591302)
chr4 (159-337)||(52242418-52242596)
chr4 (218-337)||(50221552-50221673)
chr4 (300-337)||(22354683-22354720)
chr4 (269-337)||(3838106-3838174)
chr4 (269-337)||(20150853-20150921)
chr4 (310-341)||(14970023-14970054)
chr4 (99-149)||(8711346-8711396)
chr4 (219-279)||(15011528-15011589)
chr4 (218-280)||(25031092-25031157)
chr4 (225-336)||(52313483-52313595)
chr4 (285-337)||(11023-11075)
chr4 (228-279)||(21138-21190)
chr4 (99-171)||(13882201-13882273)
chr4 (301-337)||(18238826-18238862)
[»] scaffold1835 (1 HSPs)
scaffold1835 (95-338)||(18-260)
[»] scaffold0106 (1 HSPs)
scaffold0106 (95-333)||(18857-19094)
[»] scaffold0072 (2 HSPs)
scaffold0072 (96-374)||(58548-58824)
scaffold0072 (96-342)||(62326-62569)
[»] scaffold0046 (2 HSPs)
scaffold0046 (95-337)||(16085-16327)
scaffold0046 (99-337)||(25272-25510)
[»] scaffold0107 (1 HSPs)
scaffold0107 (95-338)||(13551-13791)
[»] scaffold0012 (2 HSPs)
scaffold0012 (90-344)||(220327-220578)
scaffold0012 (269-341)||(228321-228393)
[»] scaffold0054 (1 HSPs)
scaffold0054 (96-378)||(74985-75265)
[»] scaffold0077 (1 HSPs)
scaffold0077 (95-338)||(54811-55053)
[»] scaffold0081 (1 HSPs)
scaffold0081 (95-344)||(3997-4243)
[»] scaffold0010 (4 HSPs)
scaffold0010 (96-336)||(7021-7260)
scaffold0010 (114-337)||(1387-1609)
scaffold0010 (95-337)||(59886-60127)
scaffold0010 (228-280)||(126360-126413)
[»] scaffold0853 (1 HSPs)
scaffold0853 (95-283)||(5-192)
[»] scaffold0708 (1 HSPs)
scaffold0708 (95-372)||(1569-1844)
[»] scaffold0417 (1 HSPs)
scaffold0417 (110-369)||(355-612)
[»] scaffold0282 (1 HSPs)
scaffold0282 (96-337)||(17335-17575)
[»] scaffold0091 (1 HSPs)
scaffold0091 (117-323)||(31650-31854)
[»] scaffold0047 (1 HSPs)
scaffold0047 (96-338)||(22635-22873)
[»] scaffold0005 (3 HSPs)
scaffold0005 (96-338)||(13646-13884)
scaffold0005 (99-278)||(165674-165854)
scaffold0005 (96-337)||(268383-268621)
[»] scaffold0359 (1 HSPs)
scaffold0359 (99-337)||(16147-16385)
[»] scaffold0480 (1 HSPs)
scaffold0480 (96-337)||(10146-10387)
[»] scaffold0022 (2 HSPs)
scaffold0022 (96-374)||(128062-128337)
scaffold0022 (301-337)||(117464-117500)
[»] scaffold0016 (2 HSPs)
scaffold0016 (96-283)||(118807-118994)
scaffold0016 (110-215)||(172231-172336)
[»] scaffold0040 (3 HSPs)
scaffold0040 (96-337)||(22929-23168)
scaffold0040 (96-332)||(14073-14307)
scaffold0040 (96-337)||(102788-103029)
[»] scaffold0138 (1 HSPs)
scaffold0138 (115-338)||(17364-17586)
[»] scaffold0074 (1 HSPs)
scaffold0074 (96-337)||(8917-9159)
[»] scaffold0485 (1 HSPs)
scaffold0485 (112-237)||(10877-11001)
[»] scaffold1419 (1 HSPs)
scaffold1419 (99-338)||(771-1009)
[»] scaffold0073 (1 HSPs)
scaffold0073 (99-242)||(57604-57747)
[»] scaffold0420 (1 HSPs)
scaffold0420 (115-336)||(5461-5681)
[»] scaffold0009 (2 HSPs)
scaffold0009 (156-337)||(191798-191978)
scaffold0009 (96-337)||(86272-86510)
[»] scaffold0090 (1 HSPs)
scaffold0090 (146-374)||(2794-3019)
[»] scaffold0108 (2 HSPs)
scaffold0108 (95-194)||(3888-3987)
scaffold0108 (266-337)||(4012-4082)
[»] scaffold0716 (1 HSPs)
scaffold0716 (99-238)||(1876-2015)
[»] scaffold0007 (3 HSPs)
scaffold0007 (190-337)||(160278-160424)
scaffold0007 (226-337)||(163557-163666)
scaffold0007 (270-338)||(17106-17174)
[»] scaffold0123 (1 HSPs)
scaffold0123 (96-372)||(25811-26084)
[»] scaffold1403 (1 HSPs)
scaffold1403 (151-337)||(1307-1491)
[»] scaffold0357 (3 HSPs)
scaffold0357 (96-337)||(13883-14124)
scaffold0357 (115-343)||(4696-4923)
scaffold0357 (269-337)||(15328-15396)
[»] scaffold0394 (1 HSPs)
scaffold0394 (245-341)||(13010-13104)
[»] scaffold0112 (1 HSPs)
scaffold0112 (245-341)||(23120-23215)
[»] scaffold0877 (2 HSPs)
scaffold0877 (245-344)||(2021-2119)
scaffold0877 (99-237)||(1273-1411)
[»] scaffold0500 (1 HSPs)
scaffold0500 (192-278)||(8302-8389)
[»] scaffold0076 (1 HSPs)
scaffold0076 (99-337)||(22499-22735)
[»] scaffold0338 (1 HSPs)
scaffold0338 (99-237)||(10862-11000)
[»] scaffold0125 (1 HSPs)
scaffold0125 (245-338)||(1050-1142)
[»] scaffold0083 (1 HSPs)
scaffold0083 (245-341)||(42257-42351)
[»] scaffold0139 (1 HSPs)
scaffold0139 (115-337)||(39068-39289)
[»] scaffold0686 (1 HSPs)
scaffold0686 (96-344)||(1991-2239)
[»] scaffold0006 (2 HSPs)
scaffold0006 (115-344)||(97778-98006)
scaffold0006 (115-344)||(107056-107284)
[»] scaffold0290 (1 HSPs)
scaffold0290 (253-338)||(1041-1125)
[»] scaffold0057 (1 HSPs)
scaffold0057 (247-340)||(72392-72484)
[»] scaffold1439 (1 HSPs)
scaffold1439 (245-337)||(1036-1126)
[»] scaffold0151 (1 HSPs)
scaffold0151 (115-280)||(30938-31104)
[»] scaffold0601 (1 HSPs)
scaffold0601 (236-341)||(7528-7631)
[»] scaffold0529 (1 HSPs)
scaffold0529 (110-270)||(3991-4151)
[»] scaffold0180 (1 HSPs)
scaffold0180 (146-338)||(33668-33859)
[»] scaffold0130 (1 HSPs)
scaffold0130 (269-337)||(905-973)
[»] scaffold0065 (1 HSPs)
scaffold0065 (99-215)||(55754-55870)
[»] scaffold0145 (1 HSPs)
scaffold0145 (247-337)||(10699-10789)
[»] scaffold0008 (2 HSPs)
scaffold0008 (270-337)||(72564-72630)
scaffold0008 (156-341)||(13748-13933)
[»] scaffold0695 (1 HSPs)
scaffold0695 (218-337)||(6772-6893)
[»] scaffold0535 (1 HSPs)
scaffold0535 (236-341)||(7525-7630)
[»] scaffold0395 (1 HSPs)
scaffold0395 (127-253)||(7828-7953)
[»] scaffold0205 (1 HSPs)
scaffold0205 (219-336)||(30587-30705)
[»] scaffold0165 (1 HSPs)
scaffold0165 (156-337)||(26844-27025)
[»] scaffold0051 (1 HSPs)
scaffold0051 (300-338)||(32157-32195)
[»] scaffold0037 (1 HSPs)
scaffold0037 (255-337)||(82967-83048)
[»] scaffold0003 (1 HSPs)
scaffold0003 (228-280)||(96341-96394)
[»] scaffold0293 (1 HSPs)
scaffold0293 (300-336)||(19301-19337)
[»] scaffold0235 (1 HSPs)
scaffold0235 (96-215)||(14318-14437)
[»] scaffold0379 (1 HSPs)
scaffold0379 (99-237)||(13989-14127)
[»] scaffold0331 (1 HSPs)
scaffold0331 (99-237)||(12216-12354)
[»] scaffold0254 (1 HSPs)
scaffold0254 (218-337)||(21578-21699)
[»] scaffold0200 (1 HSPs)
scaffold0200 (300-338)||(18608-18646)
[»] scaffold0117 (2 HSPs)
scaffold0117 (300-338)||(40218-40256)
scaffold0117 (300-338)||(42686-42724)
[»] scaffold0043 (2 HSPs)
scaffold0043 (219-344)||(27910-28036)
scaffold0043 (236-344)||(10725-10833)
[»] scaffold0101 (1 HSPs)
scaffold0101 (300-337)||(476-513)
[»] scaffold0780 (1 HSPs)
scaffold0780 (128-270)||(2537-2681)
[»] scaffold0439 (1 HSPs)
scaffold0439 (301-337)||(12410-12446)
[»] scaffold0413 (1 HSPs)
scaffold0413 (269-337)||(13496-13564)
[»] scaffold0292 (1 HSPs)
scaffold0292 (219-279)||(7489-7549)
[»] scaffold0044 (1 HSPs)
scaffold0044 (228-337)||(4672-4782)
[»] scaffold0019 (2 HSPs)
scaffold0019 (236-343)||(21913-22020)
scaffold0019 (219-279)||(30004-30065)
[»] scaffold1296 (1 HSPs)
scaffold1296 (301-344)||(2060-2103)
[»] scaffold0021 (3 HSPs)
scaffold0021 (226-337)||(135526-135636)
scaffold0021 (226-337)||(144234-144344)
scaffold0021 (310-344)||(641-675)
[»] scaffold0306 (1 HSPs)
scaffold0306 (310-344)||(10653-10687)
[»] scaffold0126 (1 HSPs)
scaffold0126 (310-348)||(7069-7107)
[»] scaffold0737 (1 HSPs)
scaffold0737 (212-337)||(926-1050)
[»] scaffold0589 (1 HSPs)
scaffold0589 (228-280)||(4327-4380)
[»] scaffold0452 (1 HSPs)
scaffold0452 (219-279)||(12680-12741)
[»] scaffold0301 (2 HSPs)
scaffold0301 (110-215)||(11436-11541)
scaffold0301 (110-215)||(15836-15941)
[»] scaffold0289 (1 HSPs)
scaffold0289 (90-127)||(2670-2707)
[»] scaffold0285 (1 HSPs)
scaffold0285 (90-127)||(12399-12436)
[»] scaffold0120 (1 HSPs)
scaffold0120 (241-337)||(29311-29407)
[»] scaffold0116 (1 HSPs)
scaffold0116 (317-378)||(46059-46119)
[»] scaffold0096 (1 HSPs)
scaffold0096 (219-279)||(22031-22092)
[»] scaffold0034 (2 HSPs)
scaffold0034 (219-279)||(120887-120948)
scaffold0034 (285-337)||(33361-33413)
[»] scaffold1128 (1 HSPs)
scaffold1128 (251-338)||(464-550)
[»] scaffold0454 (1 HSPs)
scaffold0454 (301-337)||(495-531)
[»] scaffold0363 (1 HSPs)
scaffold0363 (301-337)||(10158-10194)
[»] scaffold0247 (1 HSPs)
scaffold0247 (285-337)||(17245-17297)
[»] scaffold0122 (1 HSPs)
scaffold0122 (301-337)||(33837-33873)
[»] scaffold0114 (1 HSPs)
scaffold0114 (269-337)||(46242-46309)
[»] scaffold0098 (2 HSPs)
scaffold0098 (129-185)||(24997-25053)
scaffold0098 (129-185)||(35867-35923)
[»] scaffold0075 (2 HSPs)
scaffold0075 (285-337)||(50746-50798)
scaffold0075 (228-279)||(60837-60889)
[»] scaffold0023 (1 HSPs)
scaffold0023 (310-338)||(16759-16787)


Alignment Details
Target: scaffold0014 (Bit Score: 212; Significance: 1e-116; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 90 - 337
Target Start/End: Complemental strand, 203787 - 203540
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatata 189  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |      
203787 ttttctacgaaaattcacctaatcacatgtttcaaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtaaacactttctacacc 203688  T
190 aattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatca 289  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
203687 aattctacaattttccatcatctaatcctcaatttatcagttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatca 203588  T
290 gaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
203587 gaattataaagcttaagaagattgaatgttagtctcacccttacctta 203540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 79327 - 79363
Alignment:
301 cttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||| |||||||||||||||||||||||||||||||    
79327 cttaataagattgaatgttagtctcacccttacctta 79363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 180; Significance: 4e-97; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 90 - 337
Target Start/End: Original strand, 22526215 - 22526461
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatata 189  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| ||     
22526215 ttttctacgaaaattcacctaatcacatggttcaaagcttaaaactgattctaaacatcaccatatggattatctaaggtatgtaaacactttctacatc 22526314  T
190 aattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatca 289  Q
    |||||||||| ||| ||||||||||| ||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
22526315 aattctacaagttttcatcatctaatcctcaattgatcacttttaacctaa-ttcccaattctcaaaactaaacctacaacttgttaaatctaatcatca 22526413  T
290 gaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     |||||||| ||||||||| ||||||||||||||||||||||||||||    
22526414 aaattataaggcttaagaaaattgaatgttagtctcacccttacctta 22526461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 96 - 374
Target Start/End: Original strand, 22984376 - 22984651
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || | ||||    
22984376 acgaaaattcatctaatcacatggttctaagcataaaactgattctaaacatcaccctatggattatctaaggtctgtaaacactttctacatcagttct 22984475  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||| ||||||| | |||||||||||||||| || |||||||||||| ||||||||| |    
22984476 acaagtttccatcatctaatcctcaattgatcacttttaacctaa-tttccaactttcaaaactaaacctac-acatgttaaatctaatcatcagaatca 22984573  T
296 taaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttct 374  Q
     || |||||||||||||||||||||||||||||||||||| |||||||| ||| ||| | |||||||||||||||||||    
22984574 -aaggcttaagaagattgaatgttagtctcacccttacctaaacaaatcgaaatcggcatcctctcttggttctcttct 22984651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 90 - 374
Target Start/End: Original strand, 16800165 - 16800446
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatata 189  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||     
16800165 ttttctacgaaaattcacctaatcacatggttcaaagtttaaaattgattctaaacatcaccctatggattatctaaggtctgtaaacactttctacatc 16800264  T
190 aattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatca 289  Q
    |||||||||| ||| ||||||||||| ||||||| |||||||||||||||| || ||||||||||||| || |||||||||||||||||||||| ||| |    
16800265 aattctacaagttttcatcatctaatcctcaattgatcacttttaacctaa-ttcccaattctcaaaattatacctacaacttgttaaatctaatcatta 16800363  T
290 gaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttct 374  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||||||   |||||||| ||  ||||||| |||||||||||||    
16800364 gaattataaggcttaagaaaattgaatgatagtctcacccttacctta--taatcaaaatcgccagcctcttttggttctcttct 16800446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 108 - 374
Target Start/End: Original strand, 22996537 - 22996800
Alignment:
108 ctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccat 207  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || | | |||||| |||||||    
22996537 ctaatcacatggttctaagcataaaactgattctaaacatcaccctatggattatctaaggtctgtaaacactttctacatcagtcctacaagtttccat 22996636  T
208 catctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaaga 307  Q
    |||||||| ||||||| |||||||||||||||| ||||||| | ||||||||| |||||| || |||||||||||| ||||| ||| || | ||||||||    
22996637 catctaatcctcaattgatcacttttaacctaa-tttccaactttcaaaactacacctac-acatgttaaatctaatcatcaaaatcat-aggcttaaga 22996733  T
308 agattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttct 374  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
22996734 agattgaatgttagtctcacccttaccttaacaaatcgaaatcggcagcctctcttggttctcttct 22996800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 101 - 342
Target Start/End: Original strand, 22183860 - 22184097
Alignment:
101 aattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaat 200  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| | |||| |||||||||| || |||||||| |     
22183860 aattcatctaatcacatggttctaagcataaaactgattctaaacatcaccctatggattatctaagctatgtatacactttctacatcaattctacgaa 22183959  T
201 tttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaag 300  Q
    |||||||||| |||| |||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||    
22183960 tttccatcatttaatcctcaattaatcacttttaacctaattt--caaatctc-aaactaaacctacaacttgttaaatctaatcatcagaattat-aag 22184055  T
301 cttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    |||||||| | ||||||||| |||||||||||||||||||||    
22184056 cttaagaaaactgaatgttattctcacccttaccttaacaaa 22184097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 98 - 338
Target Start/End: Complemental strand, 20501468 - 20501229
Alignment:
98 gaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctac 197  Q
    |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||||||||||    
20501468 gaaaatgcatcaaatcacatggttctaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgcacacactttctacataaattctac 20501369  T
198 aattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattat 296  Q
    || ||||||||||||||| ||||||| |||||| ||||||| | | |||||||||| |||| ||| |||| ||| |||||||||||| ||||||||| ||    
20501368 aagtttccatcatctaatcctcaatt-atcactcttaaccttaatctccaattctcaaaaagtaaccctaaaacatgttaaatctaatcatcagaatcat 20501270  T
297 aaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
     | |||||||||||||||||||||||| ||||||||||||||    
20501269 -aggcttaagaagattgaatgttagtcccacccttaccttaa 20501229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 96 - 330
Target Start/End: Complemental strand, 17085544 - 17085311
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||     
17085544 acgaaaatgcacctaatcacatggttctaagcttaagactgattctaaacatcaccctatggattatctaaggtctgaacacactttctacataaattca 17085445  T
196 acaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||||||||||||||| ||||||| |||||| |||| |||||||||| | |||  |||||||| ||||||||||||||||||||| ||||| ||||    
17085444 acaagtttccatcatctaatcctcaatt-atcactcttaaccctaattttcaatttccaaaaactaaccctacaacttgttaaatctaatcatcataatt 17085346  T
295 ataaagcttaagaagattgaatgttagtctcaccct 330  Q
    | || |||||||||||||||||||||||| ||||||    
17085345 a-aaggcttaagaagattgaatgttagtcccaccct 17085311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 28398300 - 28398540
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||| || ||||||    
28398300 acgaaaatccacctaatcacatggttcaaagcttaaaactggttctaaacatcaccctatgaattatctaaggtctgtacgcactttctacatcaattct 28398399  T
196 acaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    |||| ||||||||||||||| ||||||| |||||| |||| ||||||||| ||||||| ||||||||| |||||||| |||||| ||||| |||||||||    
28398400 acaaatttccatcatctaatcctcaatt-atcactcttaaccctaatttt-caattctccaaaactaatcctacaacatgttaattctaatcatcagaat 28398497  T
294 tataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     || | ||||||||| ||||||||||||||||||||||||||||    
28398498 cat-aggcttaagaaaattgaatgttagtctcacccttacctta 28398540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 22252555 - 22252315
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| || |||||     
22252555 acgaaaatgcatcaaatcacatggttctaagcttaaaactgattctaaacatcaccctatggattatctaagttctgtacacactttctacatcaattca 22252456  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
     || |||  |||||||||||  |||||| |||||| ||||||  | |||| ||||||| ||||||||||||||||| ||||||||||||  ||||||||     
22252455 gcagtttctcatcatctaatcatcaatt-atcactcttaaccctaatttcaaattctcaaaaactaaacctacaacatgttaaatctaattatcagaatc 22252357  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    || | |||||||||||||||||||||||| |||||||||||||    
22252356 at-aggcttaagaagattgaatgttagtcccacccttacctta 22252315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 91 - 337
Target Start/End: Complemental strand, 22385321 - 22385077
Alignment:
91 tttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataa 190  Q
    |||| |||||| | |||| ||||||||||||| || || ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||| || |    
22385321 tttccacgaaattgcatcaaatcacatggttctaaactaaaaactgattctaaacatcaccctatggattatataaggtctgtacacactttctacatca 22385222  T
191 attctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcag 290  Q
    |||| ||| |||| |||||||||||  |||||| |||||| ||||||  | |||| |||||||||||||||||||||||| ||||||||||||  |||||    
22385221 attcaacagtttttcatcatctaatcatcaatt-atcactcttaaccctaatttcaaattctcaaaactaaacctacaacatgttaaatctaattatcag 22385123  T
291 aattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||| || | |||||||||||||||||||||||| |||| ||||||||    
22385122 aatcat-aggcttaagaagattgaatgttagtcccaccattacctta 22385077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 95 - 338
Target Start/End: Complemental strand, 20532774 - 20532535
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||     
20532774 tacgaaaatccacctaatctcatggttcaaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtaaacactttctacatcaattt 20532675  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    ||||||| | ||||||||||   ||||||  ||||| ||||||  | | ||||| | |||||||| ||||||| || |||||||||||| ||||||||||    
20532674 tacaattctacatcatctaaccatcaatt-ctcactcttaaccctaatatccaactttcaaaact-aacctac-acatgttaaatctaatcatcagaatt 20532578  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||  ||||||| |  |||||||||||||||||||||||||||||    
20532577 at-cagcttaatagaattgaatgttagtctcacccttaccttaa 20532535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 22245477 - 22245237
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| |||||| |||||| ||| || |||||     
22245477 acgaaaatgcatcaaatcacatggttctaagcttaaaactgattctaaacatcagcctatggattatctaagttctgtacacacttgctacatcaattca 22245378  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
     || |||   ||||||||||  |||||||| |||| ||||||  | |||| ||||||| ||||||||||||||||| ||||||||||||  ||||||||     
22245377 gcagtttctaatcatctaatcatcaattaa-cactcttaaccctaatttcaaattctcaaaaactaaacctacaacatgttaaatctaattatcagaatc 22245279  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    || | |||||||||||||||||||||||| |||||||||||||    
22245278 at-aggcttaagaagattgaatgttagtcccacccttacctta 22245237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 95 - 336
Target Start/End: Complemental strand, 22418825 - 22418588
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| |  |||||| ||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||||||| || ||||     
22418825 tacgaaaatcctcctaatctcatggttcaaagcttaaaattgattctaaacatcaccccatggattatccaaggtctgtaaacactttctacatcaatt- 22418727  T
195 tacaattttc-catcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    || || |||| || ||||||||  |||||| |||| | ||||||  | ||||||| | |||||||| ||||||| || |||||||||||| |||||||||    
22418726 tagaagtttctcaccatctaatcatcaatt-atcaatcttaaccctaatttccaactttcaaaact-aacctac-acatgttaaatctaatcatcagaat 22418630  T
294 tataaagcttaagaagattgaatgttagtctcacccttacctt 336  Q
    |||  |||||||||  |||||||||||||||||||||||||||    
22418629 tat-cagcttaagagaattgaatgttagtctcacccttacctt 22418588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 96 - 342
Target Start/End: Complemental strand, 40492268 - 40492023
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| |||||||||||||| ||| |||||||||| |||     |||| | || |||||||||||||||||||||||||||||| || ||||||    
40492268 acgaaaattcacctaatcacatggtttaaaccttaaaactggttcatgtaatcatcgtatggattatctaaggtctgtaaacactttctacatcaattct 40492169  T
196 acaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    |||| ||| || ||||||||  ||||||  ||||| |||| ||||||| || ||||||| |||| ||| ||||| ||||||||||| ||| ||||| |||    
40492168 acaagttttcaccatctaatcatcaatt-ctcactcttaaccctaattctcaaattctctaaaattaatcctac-acttgttaaatttaatcatcaaaat 40492071  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    || | | ||||| ||||||||||| ||||||||||||||||||| ||||    
40492070 tacaga-cttaataagattgaatgctagtctcacccttaccttagcaaa 40492023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 96 - 344
Target Start/End: Complemental strand, 2418241 - 2417996
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || |||||||||||||| ||| ||||||||||||||     |||| |||| | ||||||||||||||||| |||||||||| || |||||     
2418241 acgaaaatccacctaatcacatggtttaaaccttaaaactgattcatgtaatcatcctatgaattatctaaggtctgtacacactttctacatcaattca 2418142  T
196 acaattttccatcatctaattctcaattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
     || |||  || ||||||||  ||||||  ||||| |||||| ||||| || ||||||| ||||||| |||||| ||| |||||||||| ||||||||||    
2418141 gcagtttctcaccatctaatcatcaattc-tcactcttaaccctaattctcaaattctccaaactaatcctaca-ctttttaaatctaatcatcagaatt 2418044  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    | |   | |||||| |||||||| |||||||||||||||||||| |||||    
2418043 acat--cataagaaaattgaatgctagtctcacccttaccttaagaaatc 2417996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 196 - 330
Target Start/End: Complemental strand, 17085210 - 17085077
Alignment:
196 acaattttccatcatctaattctcaattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||||||||||||||| |||||||| ||||| |||||| |||||||| | |||  |||||||| ||||||||||||||||||||| ||||| ||||    
17085210 acaagtttccatcatctaatcctcaatta-tcactcttaaccctaattttcaatttccaaaaactaaccctacaacttgttaaatctaatcatcataatt 17085112  T
295 ataaagcttaagaagattgaatgttagtctcaccct 330  Q
    | || |||||||||||||||||||||||| ||||||    
17085111 a-aaggcttaagaagattgaatgttagtcccaccct 17085077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 99 - 337
Target Start/End: Complemental strand, 19928996 - 19928758
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| ||| |||||| |||||||| || |||||||||||||| ||  ||||  ||| ||||||||||||||||||| ||| |||||| || ||||| |||    
19928996 aaaaatcacctaatctcatggttctaaccttaaaactgattccaattatcattctatggattatctaaggtctgtacacagtttctacatcaattcaaca 19928897  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatcagaattata 297  Q
    | ||| |||||||||||  |||||  ||||||||||||||||||     |||||  ||||||||||||| ||| ||||||||  ||   ||||||| | |    
19928896 agttttcatcatctaatcatcaatctatcacttttaacctaattcctacattctaaaaaactaaacctataacatgttaaatgcaattttcagaatca-a 19928798  T
298 aagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    | ||||||||  | ||||||||||||||||||||||||||    
19928797 aggcttaagattaatgaatgttagtctcacccttacctta 19928758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 151 - 337
Target Start/End: Complemental strand, 17266328 - 17266144
Alignment:
151 cctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaatt 250  Q
    |||| |||||||||||||||||||||||||||||| || |||||||||||| | |||||   |||  ||||||  ||||||| | |||||||| | | ||    
17266328 cctatggattatctaaggtctgtaaacactttctacatcaattctacaattctacatcaataaatcatcaatttctcactttaaccctaatttccaactt 17266229  T
251 ctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||| |||  || ||||| |||||||||||  |||||||||||||| | |  |||| |||||||||||||||||||||||||||||||    
17266228 ctctaaaacaatcctac-acttgttaaatacaaccatcagaattacaga-tttaataagattgaatgttagtctcacccttacctta 17266144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 104 - 269
Target Start/End: Original strand, 37516426 - 37516592
Alignment:
104 tcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaatttt 203  Q
    ||||| |||| |||| ||| || |||||||||||||  ||  |||| |||| ||||||||||||||||||| ||| |||||| || ||||| ||||||||    
37516426 tcatccaatctcatgtttctaaccttaaaactgatttcaattatcatcctatggattatctaaggtctgtacacaatttctacatcaattcaacaatttt 37516525  T
204 ccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaa 269  Q
    | ||||||||||  ||||||  |||||||||| ||||||| || |||||| |||||| |||||||||    
37516526 ctatcatctaatcatcaattcctcacttttaaccctaattctcaaattctaaaaactcaacctacaa 37516592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 338
Target Start/End: Complemental strand, 14102591 - 14102351
Alignment:
96 acgaaaattcatctaatcacatggttcaaagc-ttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||||| |||||||||||||| ||| | |||||| |||||||    |||  |||| ||||||||||||||||||||||| |||||| || |||      
14102591 acgaaaattcacctaatcacatggtttaaaaccttaaaaatgattcttgtaatcgtcctatggattatctaaggtctgtaaacagtttctacatcaatct 14102492  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
     |||| ||| |||||  ||||  ||||||  ||||||| ||||||||| ||||| ||| | ||| ||| |||||| |||||||||| ||| |||||||||    
14102491 aacaacttttcatcaattaatcatcaattcctcacttt-aacctaattctccaacttcgctaaattaatcctaca-cttgttaaat-taatcatcagaat 14102395  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    || | | ||||| ||||||||||| ||||||||||||||||||||    
14102394 tacaga-cttaataagattgaatgctagtctcacccttaccttaa 14102351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 337
Target Start/End: Original strand, 22365386 - 22365606
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| ||| |||| |||| ||||||||||||||||||||||| |||||| || |||   |||||||| |||||  |||    
22365386 catggttttaagcttaacattgattccaaatatcaacctatggattatctaaggtctgtaaacagtttctacatcaatctaacaatttttcatcaattaa 22365485  T
215 ttctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |   |||||  |||| |||||| ||||| || ||||||| ||||  || ||||| ||||||||||| ||| ||||||||||| | | ||||| |||||||    
22365486 tcaccaatttctcac-tttaacttaattctcaaattctctaaaatcaatcctac-acttgttaaatttaatcatcagaattacaga-cttaataagattg 22365582  T
314 aatgttagtctcacccttacctta 337  Q
    |||| |||||||||||||||||||    
22365583 aatgctagtctcacccttacctta 22365606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 344
Target Start/End: Complemental strand, 19154224 - 19154005
Alignment:
124 aagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaatt 223  Q
    |||||||| | |||||| | | |||| |||| ||||| |||||||||| || ||| |||||| || |||   |||||||| |||||  ||||  ||||||    
19154224 aagcttaacattgattccagatatcaacctatggattgtctaaggtctatacacagtttctacatcaatctaacaatttttcatcaattaatcatcaatt 19154125  T
224 aatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagt 322  Q
      ||||||| |||||||||||| ||||||| |||||||| |||||||| ||||||||  ||| |||||||| ||||| ||||| |  |||||||| ||||    
19154124 tctcacttt-aacctaattttcaaattctcaaaaactaatcctacaacctgttaaatacaactatcagaatcataaa-cttaatagaattgaatgctagt 19154027  T
323 ctcacccttaccttaacaaatc 344  Q
    | |||| ||||||||| |||||    
19154026 cccaccgttaccttaagaaatc 19154005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 17460299 - 17460207
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||||| ||||| |||||||  ||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
17460299 ccaattcccaaaattaaacctctaacatgttaaatctaattatcagaatcatag-gcttaagaagattgaatgttagtcccacccttaccttaa 17460207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 348
Target Start/End: Original strand, 24353912 - 24354027
Alignment:
232 ttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcaccct 330  Q
    ||||||||||| || ||||||| |||||||| | |||| |||||||||| ||| ||||||||||| | | ||||| ||||||||||| ||||||||||||    
24353912 ttaacctaattctcaaattctctaaaactaaccataca-cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgctagtctcaccct 24354009  T
331 taccttaacaaatcaaaa 348  Q
    |||||||  |||||||||    
24354010 taccttagaaaatcaaaa 24354027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 344
Target Start/End: Complemental strand, 17438770 - 17438657
Alignment:
231 tttaacctaattttccaattctca-aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcaccc 329  Q
    |||||||||||| || |||||||| ||||||| |||||||||||||||||   ||||||||||| ||| | ||||| |  |||||||| |||||||| ||    
17438770 tttaacctaattctcaaattctcacaaactaatcctacaacttgttaaatacgaccatcagaatcataga-cttaatagaattgaatgctagtctcaacc 17438672  T
330 ttaccttaacaaatc 344  Q
    ||||||||| |||||    
17438671 ttaccttaagaaatc 17438657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 338
Target Start/End: Complemental strand, 7465082 - 7464903
Alignment:
159 ttatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaa 257  Q
    ||||||||||||||||||||  ||||| || |||   |||| ||| ||||   ||||||||||||  || | || | ||||||||||||| ||||| ||     
7465082 ttatctaaggtctgtaaacaaattctacatcaatctaacaacttttcatccattaattctcaatttctctcattaaccctaattttccaacttctctaat 7464983  T
258 ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
      || |||||| |||| |||||  || ||||||||||||| || |||| || |||||||||||||||||||||||||||||    
7464982 tcaatcctaca-cttgctaaatacaatcatcagaattatataggttaataaaattgaatgttagtctcacccttaccttaa 7464903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 256
Target Start/End: Complemental strand, 21999665 - 21999518
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||||||| |  |||||||||||||| || ||||| |||| | ||||||||||||||||| ||| |||||| || ||||| |||  ||| || ||    
21999665 aatcccatggttctatccttaaaactgattcaaatcatcatcctatgcattatctaaggtctgtacacagtttctacattaattcaacacgttttcacca 21999566  T
210 tctaattctcaattaatcacttttaa-cctaattttccaattctcaaa 256  Q
    ||||||   ||| | ||||||||||| ||||||| || ||||||||||    
21999565 tctaatcaccaaattatcacttttaaccctaattctcaaattctcaaa 21999518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 26220556 - 26220622
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||||    
26220556 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctta 26220622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 26222397 - 26222331
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||||    
26222397 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctta 26222331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 341
Target Start/End: Complemental strand, 45289882 - 45289757
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaacc-tacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||||||||||||||||||| |||||  | ||||||||||| ||||||| |||||| ||||||||| ||   | ||||| ||| | |||||||  |||||    
45289882 tcaattaatcacttttaaccctaattcccaaattctcaaaaactaaaccctacaacatgttaaatccaatttttagaatcataga-cttaagattattga 45289784  T
315 atgttagtctcacccttaccttaacaa 341  Q
    ||||||||| |||||||||||||||||    
45289783 atgttagtcccacccttaccttaacaa 45289757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 34951257 - 34951362
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    ||||||||||||| |  ||||||||||||||||| ||||| |||| | |||||||||| |||||| ||| |||||| || ||||| |||  ||| || ||    
34951257 aatcacatggttctatccttaaaactgattctaatcatcatcctatgcattatctaagatctgtatacagtttctacattaattcaacacattttcacca 34951356  T
210 tctaat 215  Q
    ||||||    
34951357 tctaat 34951362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 39834389 - 39834478
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttcta 185  Q
    ||||||||||| |||||||| ||||| ||| |||||||| |||||     |||| |||| ||||||||||||||||||||||| ||||||    
39834389 acgaaaattcacctaatcacttggtttaaaccttaaaaccgattcctgtaatcatcctatggattatctaaggtctgtaaacagtttcta 39834478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 13507299 - 13507232
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||| ||| ||||||||||| | | ||||| ||||||||||| |||||||||||||||||||    
13507299 acttgttaaatttaatcatcagaattacaga-cttaataagattgaatgctagtctcacccttacctta 13507232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 13596831 - 13596764
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||| ||| ||||||||||| | | ||||| ||||||||||| |||||||||||||||||||    
13596831 acttgttaaatttaatcatcagaattacaga-cttaataagattgaatgctagtctcacccttacctta 13596764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 19936339 - 19936239
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||||||||||| ||||||||  || ||||||||||| | | ||||| |  |||||||| ||||||||||||||||    
19936339 cctaattctcaaattctcaaaaactaaacctacaacatgttaaat--aatcatcagaattacaga-cttaatagaattgaatgctagtctcacccttacc 19936243  T
335 ttaa 338  Q
    ||||    
19936242 ttaa 19936239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 21330656 - 21330756
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||| || |||||||| |||||||| ||||| |||| | ||||||||||||||||| ||| |||||| || ||||| |||  ||| || |||||||    
21330656 catggttctaaccttaaaaccgattctaatcatcatcctatgcattatctaaggtctgtacacagtttctacattaattcaacacattttcaacatctaa 21330755  T
215 t 215  Q
    |    
21330756 t 21330756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 337
Target Start/End: Original strand, 23661257 - 23661347
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||| |||||||| |||| ||||||||||||  |||||||| || | ||||| ||||||||||||  |||| |||||||||||||    
23661257 ccaattctcaaa-ctaaacctccaacatgttaaatctaattatcagaatcat-aggcttatgaagattgaatgccagtcccacccttacctta 23661347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 5610084 - 5609843
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| |||||| | ||||| ||| || |||||||||||     |||| |||| |||||||||||||||||||| ||||||||| || ||||      
5610084 acgaaaattcacctaatctcttggtttaaatctcaaaactgattcctgtaatcatcctatggattatctaaggtctgtaaccactttctacatcaattta 5609985  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    || ||| | |||||  |  |   |||||  |||| ||||||||||||||| || ||||| ||| | || |||||  |||| |||||  ||||||||||||    
5609984 accattattcatcaatttctcaccaattcttcac-tttaacctaattttcaaacttctctaaatccaaccctac-tcttgctaaatacaaccatcagaat 5609887  T
294 tataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     ||| || |||| || |||||||| |||||||||||||||||||    
5609886 catatagattaataaaattgaatgctagtctcacccttacctta 5609843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Complemental strand, 14396948 - 14396910
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||| ||||||||||||||    
14396948 gcttaagaagattgaatgttagtcccacccttaccttaa 14396910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 256
Target Start/End: Complemental strand, 21979677 - 21979547
Alignment:
127 cttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaat 226  Q
    |||||||||||||| || ||||| |||| | |||||||||||| |||| ||| |||||| || ||||| |||  ||| || ||||||||   ||| | ||    
21979677 cttaaaactgattcaaatcatcatcctatgcattatctaaggtatgtacacagtttctacattaattcaacacgttttcaacatctaatcaccaaattat 21979578  T
227 cacttttaa-cctaattttccaattctcaaa 256  Q
    ||||||||| ||||||| || ||||||||||    
21979577 cacttttaaccctaattctcaaattctcaaa 21979547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 24049351 - 24049452
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||||||||||| |||||||| |||   ||||||| ||| | || ||||  |||||||||||||| ||||||||||    
24049351 cctaattctcaaattctcaaaaactaaacctacaacatgttaaatataattttcagaatcataga-ctcaagattattgaatgttagtcccacccttacc 24049449  T
335 tta 337  Q
    |||    
24049450 tta 24049452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 982647 - 982578
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||  ||||||||||||||||  | |||| |  |||||||| ||||||||||||||||||||    
982647 acttgttaaatacaaccatcagaattatattgattaatataattgaatgctagtctcacccttaccttaa 982578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 22966810 - 22966906
Alignment:
241 ttttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||| ||||||| ||||| || |||||| ||||||||||  || ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
22966810 ttttcaaattctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 22966906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 338
Target Start/End: Original strand, 39834569 - 39834606
Alignment:
301 cttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||| ||||||||||||||||||||||||||||||||    
39834569 cttaataagattgaatgttagtctcacccttaccttaa 39834606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 44474921 - 44474816
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||||||| |  ||||||||||||||||| ||||| |||| | |||||||||| |||||| ||| |||||| || ||||| |||  ||| || ||    
44474921 aatcccatggttctatccttaaaactgattctaatcatcatcctatgcattatctaagatctgtatacagtttctacattaattcaacacattttcacca 44474822  T
210 tctaat 215  Q
    ||||||    
44474821 tctaat 44474816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 270
Target Start/End: Complemental strand, 13661093 - 13660921
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| |||||||||  |||||||| || |||||||||||||||||  ||     || | |||||||||||||||||  || |||||| || || |  |||    
13661093 aaaactcatctaattccatggttctaaccttaaaactgattctaataattgttatatgaattatctaaggtctgtactcagtttctacatcaaattaaca 13660994  T
199 attttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaac 270  Q
     ||||||||||||||||  |||||| |||||||| || ||||||| || |||||| |||  | ||||||||||    
13660993 gttttccatcatctaatcatcaattcatcactttgaaccctaattctcaaattctaaaacttcaacctacaac 13660921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 270
Target Start/End: Complemental strand, 13719736 - 13719564
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| |||||||||  |||||||| || |||||||||||||||||  ||     || | |||||||||||||||||  || |||||| || || |  |||    
13719736 aaaactcatctaattccatggttctaaccttaaaactgattctaataattgttatatgaattatctaaggtctgtactcagtttctacatcaaattaaca 13719637  T
199 attttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaac 270  Q
     ||||||||||||||||  |||||| |||||||| || ||||||| || |||||| |||  | ||||||||||    
13719636 gttttccatcatctaatcatcaattcatcactttgaaccctaattctcaaattctaaaacttcaacctacaac 13719564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 21697484 - 21697416
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||  || ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
21697484 acttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 21697416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 340
Target Start/End: Complemental strand, 25483479 - 25483439
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaaca 340  Q
    |||||||||||||||||||||||| |||||||| |||||||    
25483479 gcttaagaagattgaatgttagtcccacccttaacttaaca 25483439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 374
Target Start/End: Complemental strand, 19807421 - 19807355
Alignment:
310 attgaatgttagtctcacccttaccttaac--aaatcaaaaccggaagcctctcttggttctcttct 374  Q
    |||||| ||||||| ||||||||||||||   ||||| ||| ||| |||||||||||||||||||||    
19807421 attgaaggttagtcccacccttaccttaatcaaaatcgaaatcggcagcctctcttggttctcttct 19807355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 22002582 - 22002703
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaact--aaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||||||| ||||||||||| ||||| || |||||||||||    ||||||||||| ||||||||| ||   ||||||| |   | |||||||  |||||    
22002582 tcaattaaccacttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatga-cttaagattattga 22002680  T
315 atgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||    
22002681 atgttagtctcacccttacctta 22002703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 43112843 - 43112898
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcacccta 154  Q
    |||||||| | |||| |||||||| || ||||||||||||||||||||||| ||||    
43112843 aaaattcacccaatctcatggttctaaccttaaaactgattctaaacatcaaccta 43112898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 20404039 - 20404120
Alignment:
254 aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctt 336  Q
    ||||||||||||||||| ||||||||  ||  |||||||| ||| | || ||||  |||||||||||||| ||||||||||||    
20404039 aaaactaaacctacaacatgttaaatacaattatcagaatcataga-ctcaagattattgaatgttagtcccacccttacctt 20404120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 22010128 - 22010091
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagc 127  Q
    |||||||||||||||||||||||| |||||||| ||||    
22010128 ttttctacgaaaattcatctaatctcatggttctaagc 22010091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 23948205 - 23948258
Alignment:
228 acttttaacctaattttccaattctcaaaacta-aacctacaacttgttaaatc 280  Q
    ||||||||||||||| || ||| | |||||||| ||||||||||||||||||||    
23948205 acttttaacctaattctcaaatccccaaaactacaacctacaacttgttaaatc 23948258  T

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Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 20499505 - 20499557
Alignment:
285 catcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
20499505 catcagaattatatagattaatagaattgaatgctagtctcacccttacctta 20499557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 171; Significance: 1e-91; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 96 - 369
Target Start/End: Complemental strand, 22792668 - 22792399
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| || ||||||    
22792668 acgaaaattcatctaatcacatggttctaagcttaaaactgattctaaacatcaccttatggattatctaaggtctgtatacactttctacatcaattct 22792569  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    |||| ||||||||||||||| ||||||| |||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||| |||||||| ||    
22792568 acaaatttccatcatctaatcctcaattgatcacttttaaaataattt--caattctcaaaactaaacctacaacttgttaaatctaatcatcagaaata 22792471  T
296 taaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttct 369  Q
    | ||||||||||| ||||||||||||||||||||||||||| |  | |||||| ||| ||||||||||||||||    
22792470 t-aagcttaagaaaattgaatgttagtctcacccttacctt-atgattcaaaatcggcagcctctcttggttct 22792399  T

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Target: chr6; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 96 - 344
Target Start/End: Original strand, 19363178 - 19363422
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| || ||||||    
19363178 acgaaagttcacctaatcacatggttcaaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtaaaaactttctacatcaattct 19363277  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| |||||||||||||||  |||| |  ||||| ||||||  | ||||||||||| ||||||||| |||||||| |||||||||||   ||||||||     
19363278 acaagtttccatcatctaatcttcaa-tcctcactcttaaccctaatttccaattctccaaaactaatcctacaacatgttaaatcta---atcagaatc 19363373  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    || | ||||||||| |||||||||||||||||||||||||||||||||||    
19363374 at-aggcttaagaaaattgaatgttagtctcacccttaccttaacaaatc 19363422  T

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Target: chr6; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 95 - 374
Target Start/End: Complemental strand, 18895724 - 18895447
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| || |||||    
18895724 tacgaaaattcacctaatcacatggttcaaagcttaaaactgattctaaatatcaccctatggattatcgaaggtctgtaaacactttctacatcaattc 18895625  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||| ||| ||||||| |||||||  ||||| ||||||  | |||||||||||| |||||||| ||||||||||||||||||||   |||| |||    
18895624 tacaagttttcataatctaatcctcaatt-ctcactcttaaccctaatttccaattctcaaaaactaatcctacaacttgttaaatcta---atcaaaat 18895529  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaa--caaatcaaaaccggaagcctctcttggttctcttct 374  Q
     || | ||||||||| |||||||||||||||||||||||||||||   ||||| ||| | | ||||||| |||||||||||||    
18895528 cat-aggcttaagaaaattgaatgttagtctcacccttaccttaatcaaaatcgaaatcagcagcctcttttggttctcttct 18895447  T

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Target: chr6; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 90 - 337
Target Start/End: Complemental strand, 17229309 - 17229064
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatata 189  Q
    |||| ||||||||| |||| ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||| ||     
17229309 ttttttacgaaaatgcatcaaatcacatggttctaagcttaaaattgattctaaacatcaccctatggattatctaaggtctgtacacactttctacatc 17229210  T
190 aattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatc 288  Q
    |||||  || |||| |||||||||||  |||||| |||||| ||||||  | |||| ||||||| ||||||||||||||||| ||||||||||||  ||     
17229209 aattcagcagtttt-catcatctaatcatcaatt-atcactcttaaccctaatttcaaattctcaaaaactaaacctacaacatgttaaatctaattatt 17229112  T
289 agaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||| || | |||||||||||||||||||||||| |||||||||||||    
17229111 agaatcat-aggcttaagaagattgaatgttagtcccacccttacctta 17229064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 96 - 378
Target Start/End: Original strand, 20137386 - 20137666
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||| ||||||| || ||||||||||||| ||||||||||| || |||||||| |||||||||| |||||||||| || |||||     
20137386 acgaaaatgcacctaatcatatggttctaaccttaaaactgattataaacatcaccttatggattatccaaggtctgtacacactttctacatcaattca 20137485  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
     || |||| |||||||||||  |||||| |||||||||||||  | || | |||||||||||||||||||||||| ||||||||||||  |||||||| |    
20137486 gcagtttttcatcatctaatcatcaattcatcacttttaaccctaattccaaattctcaaaactaaacctacaacatgttaaatctaattatcagaatca 20137585  T
296 taaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttcttctc 378  Q
    | | |||||||||||||||||||||||| ||||||| |||||  |||||  | | || ||||||||||||||||  |||||||    
20137586 t-aggcttaagaagattgaatgttagtcccaccctttccttagtaaatc-gatcgggcagcctctcttggttcttctcttctc 20137666  T

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Target: chr6; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 96 - 378
Target Start/End: Complemental strand, 22195483 - 22195203
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||| ||||||| || ||||||||||||| ||||||||||| || |||||||| |||||||||| |||||||||| || |||||     
22195483 acgaaaatgcacctaatcatatggttctaaccttaaaactgattataaacatcaccttatggattatccaaggtctgtacacactttctacatcaattca 22195384  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
     || |||| |||||||||||  |||||| |||||||||||||  | || | |||||||||||||||||||||||| ||||||||||||  |||||||| |    
22195383 gcagtttttcatcatctaatcatcaattcatcacttttaaccctaattccaaattctcaaaactaaacctacaacatgttaaatctaattatcagaatca 22195284  T
296 taaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttcttctc 378  Q
    | | |||||||||||||||||||||||| ||||||| |||||  |||||  | | || ||||||||||||||||  |||||||    
22195283 t-aggcttaagaagattgaatgttagtcccaccctttccttagtaaatc-gatcgggcagcctctcttggttcttctcttctc 22195203  T

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Target: chr6; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 95 - 338
Target Start/End: Original strand, 33443776 - 33444015
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||  | |||||    
33443776 tacgaaaatccacctaatttcatggttcaaagcttaaaattgattctaaacatcaccctatggattatctaaggttcgtaaacactttctacttcaattc 33443875  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    ||||||| | ||||||| ||   ||||||  ||||| ||||||  | ||||||| | |||||||| ||||||| || |||||||||||| ||||||||||    
33443876 tacaattctacatcatcaaaccatcaatt-ctcactcttaaccctaatttccaactttcaaaact-aacctac-acatgttaaatctaatcatcagaatt 33443972  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||  |||||||||  |||||||||||||||||||||||||||||    
33443973 at-cagcttaagagaattgaatgttagtctcacccttaccttaa 33444015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 99 - 337
Target Start/End: Original strand, 18453942 - 18454179
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||| ||||    ||||||| || |||||  |     
18453942 aaaatgcatcaaatcacatggttctaagcttaaaactgattctaaacattaccctatggattatctaaggtttgtaccttctttctacatcaattcagcg 18454041  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattata 297  Q
     |||| |||||||||||  | |||| |||||| ||||||  | |||| ||||||| |||| |||||||||||| ||||||||||||  |||||||| ||     
18454042 gtttttcatcatctaatcattaatt-atcactcttaaccctaatttcaaattctcaaaaattaaacctacaacatgttaaatctaattatcagaatcat- 18454139  T
298 aagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    | |||||||||||||||||||||||| |||||||||||||    
18454140 atgcttaagaagattgaatgttagtcccacccttacctta 18454179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 156 - 338
Target Start/End: Original strand, 18697302 - 18697483
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaa 255  Q
    ||||| |||||||||| || ||| |||||| || |||   ||| |||| |||||||||||  ||||||  ||||||||||||||||| ||||||||||||    
18697302 ggattgtctaaggtctatacacaatttctacatcaatctaacactttttcatcatctaatcatcaattcctcacttttaacctaattctccaattctcaa 18697401  T
256 aactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||| |||| ||||||||||||  |||||||| || | |||||||||||||||||| ||||| ||||||||||||||    
18697402 aactaaacctccaacatgttaaatctaattatcagaatcat-aggcttaagaagattgaatgctagtcccacccttaccttaa 18697483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 374
Target Start/End: Original strand, 20224723 - 20224950
Alignment:
141 taaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaa-ccta 239  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||| || ||||| |||| | | |||||||||    |||||| || ||| |||| ||||    
20224723 taaacatcaccctatggattatttaaggtctgtatacattttctacatcaattcaacaaatctacatcatctatccatcaatt-atgactcttaacccta 20224821  T
240 attttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaac 339  Q
    ||||||||||||| |||||| ||||| | || ||||||||||||||||||| |||||  |||||||||  ||||||||||||||||||||||||||||||    
20224822 attttccaattcttaaaact-aacctgc-acatgttaaatctaaccatcag-attat-cagcttaagagaattgaatgttagtctcacccttaccttaac 20224917  T
340 aaatcaaaaccggaagcctctcttggttctcttct 374  Q
    ||||| |||  || |||  ||||||||||||||||    
20224918 aaatcgaaattggtagc--ctcttggttctcttct 20224950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 374
Target Start/End: Original strand, 22118707 - 22118934
Alignment:
141 taaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaa-ccta 239  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||| || ||||| |||| | | |||||||||    |||||| || ||| |||| ||||    
22118707 taaacatcaccctatggattatttaaggtctgtatacattttctacatcaattcaacaaatctacatcatctatccatcaatt-atgactcttaacccta 22118805  T
240 attttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaac 339  Q
    ||||||||||||| |||||| ||||| | || ||||||||||||||||||| |||||  |||||||||  ||||||||||||||||||||||||||||||    
22118806 attttccaattcttaaaact-aacctgc-acatgttaaatctaaccatcag-attat-cagcttaagagaattgaatgttagtctcacccttaccttaac 22118901  T
340 aaatcaaaaccggaagcctctcttggttctcttct 374  Q
    ||||| |||  || |||  ||||||||||||||||    
22118902 aaatcgaaattggtagc--ctcttggttctcttct 22118934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 344
Target Start/End: Complemental strand, 23527538 - 23527293
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| ||| ||||||||||||||| || ||||||||||||||  |  |||| | | |||||||||||||||||||| |||||||||| || |||||  ||    
23527538 aaaaatcacctaatcacatggttctaaccttaaaactgattcctataatcatcttgcggattatctaaggtctgtacacactttctacatcaattcagca 23527439  T
199 attttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattat 296  Q
    ||||| |||||  ||||  ||| || |||||| |||| ||||||| || ||| ||| |||||||| |||| ||| |||||||||||| |||||||||||     
23527438 atttttcatcaattaatcatcactt-atcactcttaaccctaattctcaaatcctcaaaaactaatcctataacatgttaaatctaatcatcagaatta- 23527341  T
297 aaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
     | ||||||||| |||||||| ||||| |||||||||||||| |||||    
23527340 caggcttaagaaaattgaatgctagtcccacccttaccttaagaaatc 23527293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 200 - 338
Target Start/End: Original strand, 18707097 - 18707234
Alignment:
200 ttttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaa 299  Q
    |||| |||||||||||  ||||||  ||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||  |||||||| ||       
18707097 tttttcatcatctaatcatcaattcctcacttttaacctaattctccaattctcaaaactaaacctccaacatgttaaatctaattatcagaatcat-gg 18707195  T
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||| ||||| ||||||||||||||    
18707196 gcttaagaagattgaatgctagtcccacccttaccttaa 18707234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 344
Target Start/End: Complemental strand, 18198823 - 18198577
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||||||||  |||||||| | |||||| | | |||| |||| ||||||||||||||| ||  ||| |||||| || |||       
18198823 acgaaaatccacctaatcacatggttttaagcttaatattgattccagatatcatcctatggattatctaaggtccgtgcacagtttctacatcaatcta 18198724  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||||||| |||||||||||  ||||||  ||||||||||||| | || | | |||| |||| |||| ||||| ||||||||||||||| ||||| ||||    
18198723 acaatttttcatcatctaatcatcaattcctcacttttaaccttaattccaatttctccaaacctaatcctac-acttgttaaatctaagcatcataatt 18198625  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    ||| | |||||||| ||  |||| |||||||||| ||||||||| |||||    
18198624 ataca-cttaagaa-atataatgctagtctcaccattaccttaagaaatc 18198577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 374
Target Start/End: Original strand, 18231684 - 18231756
Alignment:
302 ttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttct 374  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||| |||||||    
18231684 ttaagaaaattgaatgttagcctcacccttaccttaacaaatcgaaatcggcagcctctcttggtcctcttct 18231756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 337
Target Start/End: Original strand, 19669183 - 19669372
Alignment:
146 atcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttc 245  Q
    |||| |||| ||||||||||||||||||| ||| |||||| || |||   || ||| | |||||  ||||  ||||||  ||||||| |||||||||| |    
19669183 atcatcctatggattatctaaggtctgtatacagtttctacatcaatctaaccattctacatcaattaatcatcaatttctcacttt-aacctaatttcc 19669281  T
246 caattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     | || || ||| ||| || |||||||| |||||  |||||||||||||||| | ||||| | |||||||||||||||||||||||||||||    
19669282 aacttttctaaattaatcc-acaacttgctaaatacaaccatcagaattatacaacttaataggattgaatgttagtctcacccttacctta 19669372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 14978633 - 14978542
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||| |||||||| |||| ||||||||||||  |||||||| | |  |||||||||||||||||||||||| ||||||||||||||    
14978633 ccaattctcaaa-ctaaacctccaacatgttaaatctaattatcagaatcacag-gcttaagaagattgaatgttagtcccacccttaccttaa 14978542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 25618990 - 25618899
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||| |||||||| |||| ||||||||||||  |||||||| | |  |||||||||||||||||||||||| ||||||||||||||    
25618990 ccaattctcaaa-ctaaacctccaacatgttaaatctaattatcagaatcacag-gcttaagaagattgaatgttagtcccacccttaccttaa 25618899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 22376010 - 22375900
Alignment:
127 cttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaat 226  Q
    |||||||||||||| ||  |||| |||| ||||||||||||||||||| | | |||||| || ||||| ||| |||| |||||||||||  ||||||  |    
22376010 cttaaaactgattccaattatcatcctatggattatctaaggtctgtacatagtttctacatcaattcaacagtttttcatcatctaatcatcaattcct 22375911  T
227 cacttttaacc 237  Q
    |||||||||||    
22375910 cacttttaacc 22375900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 218 - 337
Target Start/End: Complemental strand, 17882830 - 17882710
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaa 315  Q
    |||||||||||||||||||| |||||  | ||||||||||| ||||||||||||| ||||||||  ||   ||||||| ||| | || ||||  ||||||    
17882830 tcaattaatcacttttaaccctaattcccaaattctcaaaaactaaacctacaacatgttaaatgcaattttcagaatcataga-ctcaagattattgaa 17882732  T
316 tgttagtctcacccttacctta 337  Q
    ||||||||||||||||||||||    
17882731 tgttagtctcacccttacctta 17882710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 96 - 340
Target Start/End: Original strand, 19024107 - 19024350
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||| ||| ||| |||||||||| |||||| |||||| ||| |    ||||  ||| ||||||||||||||||||||||| || ||| || |||       
19024107 acgaaaaatcacctattcacatggtttaaagctcaaaactaatttttgtaatcatactatggattatctaaggtctgtaaacagttcctacatcaatcta 19024206  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||||||| |||||  |||| |  ||||  ||||||| | ||||||| || ||||||| ||||| || ||||| ||||||||||  ||| ||||||||||    
19024207 acaatttttcatcaattaatcccaaatttctcactttaaccctaattctcaaattctctaaaaccaatcctac-acttgttaaacttaatcatcagaatt 19024305  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaaca 340  Q
    | | | ||||| |  ||||||||  |||||||||||||||||||||    
19024306 acaga-cttaatagaattgaatgcaagtctcacccttaccttaaca 19024350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 20183590 - 20183671
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacc 237  Q
    ||||||||||||||||||| ||| |||||| || |||   ||| |||||||||||||||| ||||||| |||||||||||||    
20183590 ggattatctaaggtctgtacacagtttctacatcaatctaacagttttccatcatctaatcctcaattcatcacttttaacc 20183671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 22152401 - 22152320
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacc 237  Q
    ||||||||||||||||||| ||| |||||| || |||   ||| |||||||||||||||| ||||||| |||||||||||||    
22152401 ggattatctaaggtctgtacacagtttctacatcaatctaacagttttccatcatctaatcctcaattcatcacttttaacc 22152320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 226 - 341
Target Start/End: Original strand, 13612320 - 13612435
Alignment:
226 tcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtct 324  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||  ||  |||||||||| | | |||| ||  ||||| ||||||||     
13612320 tcacttttaacctaattctccaattatcaaaaactaaacctacaacatgttaaatacaattatcagaattacaga-cttaggagaattgattgttagtcc 13612418  T
325 cacccttaccttaacaa 341  Q
    ||||||||| |||||||    
13612419 cacccttacattaacaa 13612435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 341
Target Start/End: Complemental strand, 20556124 - 20556030
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    |||||||||||| |||||| | |||| |||||||||||| ||||||||| |||  |  |||||| |||||||||||||| |||||||||||||||||    
20556124 ccaattctcaaa-ctaaacatccaacatgttaaatctaatcatcagaatcatag-gtgtaagaaaattgaatgttagtcccacccttaccttaacaa 20556030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 253
Target Start/End: Original strand, 25739154 - 25739290
Alignment:
118 ggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattc 217  Q
    ||||| || ||||||||||||||||| ||||| |||| | |||||| |||||||||| ||| |||||| || ||||| |||  ||| || ||||||||      
25739154 ggttctaaccttaaaactgattctaatcatcatcctatgcattatcaaaggtctgtacacagtttctacattaattcaacacattttcaccatctaatca 25739253  T
218 tcaattaatcacttttaa-cctaattttccaattctc 253  Q
    |||| | ||||||||||| ||||||| || |||||||    
25739254 tcaaattatcacttttaaccctaattctcaaattctc 25739290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 16447820 - 16447754
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||||    
16447820 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctta 16447754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 16966637 - 16966716
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaa 235  Q
    ||||||||||||||||||| ||| |||||| || ||||| ||| |||||||||||||| |  |||||| |||||||||||    
16966637 ggattatctaaggtctgtacacagtttctacatcaattcaacagttttccatcatctagtcatcaatttatcacttttaa 16966716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 21119872 - 21119807
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctt 336  Q
    |||||||||| ||| ||||||||||| | | ||||| ||||||||||||||||||||||||||||||    
21119872 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctt 21119807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 378
Target Start/End: Original strand, 23539800 - 23539922
Alignment:
254 aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa-tcaaaaccgg 352  Q
    |||||||| |||||||  ||||||||  |||||||||||||||| | ||||| |  || ||||| ||||| |||||||||||||||||| || |  ||||    
23539800 aaaactaatcctacaatctgttaaatacaaccatcagaattataca-cttaatagaatcgaatgctagtcccacccttaccttaacaaaatcga--ccgg 23539896  T
353 aagcctctcttggttctcttcttctc 378  Q
     ||||||||||||||||| |||||||    
23539897 tagcctctcttggttctcctcttctc 23539922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 3851062 - 3850996
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| |||||||||||   | ||||| |||||||||||||||||||||||||||||||    
3851062 cttgttaaatttaatcatcagaattacgga-cttaataagattgaatgttagtctcacccttacctta 3850996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 338
Target Start/End: Complemental strand, 9097832 - 9097650
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctca 254  Q
    ||||||||||||||||||||||| |||||| || |||   ||| || | |||||  |||| |||||||  || |||| | ||||||| ||||| |||||     
9097832 ggattatctaaggtctgtaaacagtttctacatcaatctaacagttctacatcaattaatcctcaatttctctctttaaccctaattctccaacttctct 9097733  T
255 aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||   || |||||| ||||||||||   ||||||| ||||||| || |||| |  |||||||| ||||||||||||||||||||    
9097732 aattcaatcctaca-cttgttaaatacgaccatcataattatatagattaatagaattgaatgctagtctcacccttaccttaa 9097650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 19102528 - 19102462
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| |||||||||||   | ||||| |||||||||||||||||||||||||||||||    
19102528 cttgttaaatttaatcatcagaattactga-cttaataagattgaatgttagtctcacccttacctta 19102462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 23992970 - 23993072
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||||||||||| ||||||||  ||   ||||||||||| | || ||||  |||||||||||||| ||||||||||    
23992970 cctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaattataga-ctcaagattattgaatgttagtcccacccttacc 23993068  T
335 ttaa 338  Q
    ||||    
23993069 ttaa 23993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 344
Target Start/End: Original strand, 23077454 - 23077682
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| | | |||| |||| ||||| |||||||||| || ||| |||||| || |||   |||||||| |||||  |||    
23077454 catggttttaagcttaacattgattcgagatatcaacctatggattgtctaaggtctttacacaatttctacatcaatctaacaatttttcatcaattaa 23077553  T
215 ttctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |   |||||  ||||||| ||||||||| || ||||||| |||||||| |||||||| ||||||||  |||||| ||||| | | | ||||| |  ||||    
23077554 tcaacaatttctcacttt-aacctaattatcaaattctcaaaaactaatcctacaacatgttaaatacaaccattagaatcacaga-cttaatagaattg 23077651  T
314 aatgttagtctcacccttaccttaacaaatc 344  Q
    |||| ||||| ||| |||||||||| |||||    
23077652 aatgctagtcccactcttaccttaagaaatc 23077682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 23415916 - 23415954
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||| ||||||||||||||    
23415916 gcttaagaagattgaatgttagtcccacccttaccttaa 23415954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 27557677 - 27557715
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||||||||||||||||||||||||||||||| |||||    
27557677 gcttaagaagattgaatgttagtctcacccttagcttaa 27557715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 8226777 - 8226740
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
8226777 gcttaagaagattgaatgttagtcccacccttacctta 8226740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 17201117 - 17201080
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
17201117 gcttaagaagattgaatgttagtcccacccttacctta 17201080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 23531933 - 23531896
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
23531933 gcttaagaagattgaatgttagtcccacccttacctta 23531896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 28103689 - 28103600
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttcta 185  Q
    |||||||||||  ||||||||||||| |||  | |||||||||||     |||| |||| ||||||||||||||||||||||| ||||||    
28103689 acgaaaattcacttaatcacatggtttaaatgtcaaaactgattcctgtaatcatcctatggattatctaaggtctgtaaacaatttcta 28103600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 341
Target Start/End: Original strand, 19005963 - 19005994
Alignment:
310 attgaatgttagtctcacccttaccttaacaa 341  Q
    ||||||||||||||||||||||||||||||||    
19005963 attgaatgttagtctcacccttaccttaacaa 19005994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 23620461 - 23620386
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgta 174  Q
    |||||||| | |||| ||| |||| || ||||||||||||||||||||||| |||| | ||  |||||||||||||    
23620461 aaaattcacccaatctcattgttctaaccttaaaactgattctaaacatcaacctatgaatcttctaaggtctgta 23620386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 9621769 - 9621664
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||||||| |  ||||||||||||||||| ||||| |||| | | |||||||| |||||| ||| |||||| || ||||| |||  ||| || ||    
9621769 aatcccatggttctatccttaaaactgattctaatcatcatcctatgcaatatctaagatctgtatacaatttctacattaattcaacacattttcacca 9621670  T
210 tctaat 215  Q
    ||||||    
9621669 tctaat 9621664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 19772785 - 19772724
Alignment:
219 caattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaat 279  Q
    ||||| ||||||||||||| |||||  | ||| |||||||||||||||||||| ||||||||    
19772785 caatttatcacttttaaccctaattcccaaatcctcaaaactaaacctacaacatgttaaat 19772724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 95 - 344
Target Start/End: Original strand, 21683707 - 21683955
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || |||||    
21683707 tacgaaaatccacctaatcacatggttctaagctcaaaactgattctaaacatcaccctatggattatctaaggtttgtaaacactttctacatcaattc 21683806  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| || |||||||||||| |||||||| ||||||| |||||||||||||||||||||||    
21683807 tacaattttccatcatctaatcctcaattgatcacttttaaccgaa-tttccaattctcaaaaactaaccctacaagttgttaaatctaaccatcagaat 21683905  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    |||| | |||||||| |||||||||||||||||||||||||||||||||||    
21683906 tataga-cttaagaaaattgaatgttagtctcacccttaccttaacaaatc 21683955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 22777176 - 22777414
Alignment:
98 gaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccc-tacggattatctaaggtctgtaaacactttctatataaattcta 196  Q
    |||||| || |||||| ||||||| ||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||| || |||||||    
22777176 gaaaatccacctaatctcatggtttaaagcttaaaattgattctaaacatcacccctatggattatctaaggtctgtaaacactttctacatcaattcta 22777275  T
197 caattttccatcatctaattctcaattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    ||||||| ||||||||||| |||||||  ||||| |||||| |||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||||    
22777276 caatttttcatcatctaatcctcaattc-tcactcttaaccctaattttc-aattctcaaat-taaacctacaacttgttaaatctaatcatcagaatta 22777372  T
296 taaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||| ||||||||| ||||||||||||||||||||| ||||||    
22777373 taaggcttaagaaaattgaatgttagtctcaccctaacctta 22777414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 95 - 342
Target Start/End: Original strand, 47191312 - 47191558
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| || || |||||    
47191312 tacgaaaatccacctaaccacatggttcaaagcttaaaactgattctaaacatcaccctatggattatctaaggtccgtacacactttatacatcaattc 47191411  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||    ||||||||||| ||||||||| |||||||| |||||||||||| |||||||||    
47191412 tacaagtttccatcatctaatcctcaatt-atcactcttaaccctgatttccaattctccaaaactaatcctacaacatgttaaatctaatcatcagaat 47191510  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
     || | ||||||||| | |||||||||||| ||||||||||||||||||    
47191511 cat-aggcttaagaaaactgaatgttagtcccacccttaccttaacaaa 47191558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 95 - 338
Target Start/End: Original strand, 48521222 - 48521464
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||| || |||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||      
48521222 tacgaaaatccacctaatctcaaggttcaaagcttaaaattgattctaaacatcaccctatgaattatctaaggtctgtaaacactttctacataaatgt 48521321  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
     ||| |||| |||||||||||  ||||||  ||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||  ||||||||     
48521322 aacactttttcatcatctaatcatcaattcctcactcttaacctaattctccaattctcaaaactaaacctccaacatgttaaatctaattatcagaatc 48521421  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |  | |||||||||||||||||||||||| ||||||||||||||    
48521422 a-caggcttaagaagattgaatgttagtcccacccttaccttaa 48521464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 22125010 - 22125250
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||  |  |||||    
22125010 acgaaaatgcacctaatcacatggttctaagcttaaaactgattttaaacatcaccctatggattatctaaggtctgtacacactttctacctcgattct 22125109  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||  | |||||||||||| |||||||| |||||||| |||||||||||| |||||||||     
22125110 acaagtttccatcatctaatcctcaatt-atcactcttaaccctaatttccaattctcaaaaactaaccctacaacatgttaaatctaatcatcagaatc 22125208  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    || | ||||||||||||||||||||| || |||||||||||||    
22125209 at-aggcttaagaagattgaatgttactcccacccttacctta 22125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 96 - 338
Target Start/End: Complemental strand, 52940267 - 52940026
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| | ||||||||||| ||||||||||||||||||||||||||| ||| | ||||| | ||||||||| |||||||||| || ||||||    
52940267 acgaaaatgcatcaattcacatggttctaagcttaaaactgattctaaacatcacactatgaattatttgaggtctgtacacactttctacatcaattct 52940168  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||  | ||||||||| || |||||||| |||||||| |||||||||||| ||||||||||    
52940167 acaagtttccatcatctaatcctcaatt-atcactcttaaccctaatttccaattatcaaaaactaaccctacaacatgttaaatctaatcatcagaatt 52940069  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    | || |||||||||||||||||||||||||||| ||||||||||    
52940068 a-aaggcttaagaagattgaatgttagtctcactcttaccttaa 52940026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 20958840 - 20959081
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| || ||||||    
20958840 acgaaaatgcatcaaatcacatgattctaagcttaaaactgattctaaacatcaccctatggattatctaaggtttgtacacactttctacatcaattct 20958939  T
196 acaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctc--aaaactaaacctacaacttgttaaatctaaccatcagaa 292  Q
    |||| |||||||||||||||  |||||| |||||| |||| |||||||||  |||||||  |||||||||||| |||| |||||||||||| ||||||||    
20958940 acaagtttccatcatctaatcatcaatt-atcactcttaaccctaatttt-aaattctcaaaaaactaaaccttcaacatgttaaatctaatcatcagaa 20959037  T
293 ttataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    | || | |||||||||||||||||||||||| |||||||||||||    
20959038 tcat-aggcttaagaagattgaatgttagtcccacccttacctta 20959081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 21042745 - 21042505
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| |||||| |||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||| | |||||||||| || |||||     
21042745 acgaaaatgcatcaaatcacgtggttctaagcttaaagctgattctaaacatcactctatggattatctaaggtctgaacacactttctacatcaattca 21042646  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
     ||||||| |||||||||||  |||||| |||||| ||||||  | |||| | ||||| ||||||||||||||||| ||||||||||||  |||| |||     
21042645 gcaatttttcatcatctaatcatcaatt-atcactcttaaccctaatttcaatttctcaaaaactaaacctacaacatgttaaatctaattatcataatc 21042547  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    || | |||||||||||||||||||||||| |||||||||||||    
21042546 at-aggcttaagaagattgaatgttagtcccacccttacctta 21042505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 27652631 - 27652392
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| ||||||| |||||| ||| |||||||||||||||    |||| | || ||||||||||||||||||| ||| |||||| || |||       
27652631 acgaaaattcacctaatcatatggtttaaaccttaaaactgattcttgtaatcatcatatggattatctaaggtctgtacacagtttctacatcaatcta 27652532  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||||||| |||||  ||||  ||||||  |||| |||||| ||||| |||||||||| ||||||||  |||| ||||||||||| ||| ||||||||||    
27652531 acaatttttcatcaattaatcatcaatttctcac-tttaacttaattctccaattctctaaaactaattctac-acttgttaaatttaatcatcagaatt 27652434  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    | | | ||||| |  |||||||| |||||||||||||||||||    
27652433 acaga-cttaatagaattgaatgctagtctcacccttacctta 27652392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 337
Target Start/End: Complemental strand, 35260471 - 35260280
Alignment:
146 atcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttc 245  Q
    |||| |||| |||||||||||||| |||||||| |||||| || |||   |||||| | |||||  ||||||||||||  || | || | ||||||| ||    
35260471 atcatcctatggattatctaaggtatgtaaacagtttctacatcaatctaacaattctacatcaattaattctcaatttctcgccttaaccctaattctc 35260372  T
246 caattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||| ||| | || ||   |||||||||||  |||||||| ||||||| ||||||| |  ||||||||||||||||||||||||||||    
35260371 caattctctaaaatcaatcttacacttgttaaatacaaccatcaaaattatacagcttaatagaattgaatgttagtctcacccttacctta 35260280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 41049412 - 41049172
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| ||||||||||||||  |||||||| | ||||||   | |||| |||| ||||||||||||||||||||||| ||||||    |||       
41049412 acgaaaattcacctaatcacatggttttaagcttaacattgattcctgaaatcatcctatggattatctaaggtctgtaaacagtttctaccccaatcta 41049313  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    |||||| | |||||  ||||  ||||||  ||||||| | |||||||| | | ||||| ||| ||| ||||| ||||||| |||  |||||||| |||||    
41049312 acaattctgcatcaattaatcatcaatttctcactttaaccctaatttccaacttctccaaattaatcctac-acttgttgaatacaaccatcataatta 41049214  T
296 taaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    || | ||||| |  |||||||| |||||||||||||||||||    
41049213 tacaacttaatagaattgaatgctagtctcacccttacctta 41049172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 337
Target Start/End: Complemental strand, 50613419 - 50613239
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-a 254  Q
    ||||||||||||||||||||||||||||||  | |||| ||||||| | |||||  ||||  |||||| |||||||| | ||||||| || | || || |    
50613419 ggattatctaaggtctgtaaacactttctacctcaattatacaattctacatcaattaatcatcaatttatcactttaaccctaattctcaacttttcta 50613320  T
255 aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||| || ||||| |||||||||||  ||| |||| ||||| | | ||||| | |||||||||||||||||||||||||||||    
50613319 aaacaaatcctac-acttgttaaatacaacaatcataattacaga-cttaataggattgaatgttagtctcacccttacctta 50613239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 337
Target Start/End: Complemental strand, 50621247 - 50621067
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-a 254  Q
    ||||||||||||||||||||||||||||||  | |||| ||||||| | |||||  ||||  |||||| |||||||| | ||||||| || | || || |    
50621247 ggattatctaaggtctgtaaacactttctacctcaattatacaattctacatcaattaatcatcaatttatcactttaaccctaattctcaacttttcta 50621148  T
255 aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||| || ||||| |||||||||||  ||| |||| ||||| | | ||||| | |||||||||||||||||||||||||||||    
50621147 aaacaaatcctac-acttgttaaatacaacaatcataattacaga-cttaataggattgaatgttagtctcacccttacctta 50621067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 342
Target Start/End: Original strand, 12272304 - 12272544
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattcta-c 197  Q
    ||||||||  ||||||||||||| ||| |||||| |||||||     ||||||||| ||||||||||||||||||||||| |||||| || || |||| |    
12272304 aaaattcacttaatcacatggtttaaaccttaaatctgattcctgtaatcaccctatggattatctaaggtctgtaaacattttctacatcaa-tctatc 12272402  T
198 aattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaattat 296  Q
    || ||| || ||  ||||  ||||||  |||| |||||||||||| ||||| ||||| ||| ||| ||||| ||||||||||| ||| ||||||||  |     
12272403 aacttttcagcaattaatcatcaattcctcac-tttaacctaattctccaacttctctaaattaatcctac-acttgttaaat-taatcatcagaa-gaa 12272498  T
297 aaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    ||| ||||| ||||||||||| ||||| ||| ||||||||| ||||    
12272499 aaaacttaataagattgaatgctagtcgcactcttaccttagcaaa 12272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 13880628 - 13880537
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||| |||||||| |||| ||||||||||||  |||||||| | |  |||||||||||||||||||||||| ||||||||||||||    
13880628 ccaattctcaaa-ctaaacctccaacatgttaaatctaattatcagaatcacag-gcttaagaagattgaatgttagtcccacccttaccttaa 13880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 341
Target Start/End: Complemental strand, 20453711 - 20453632
Alignment:
261 aacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    |||||||| | ||||||||||||  |||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||    
20453711 aacctacagcatgttaaatctaattatcaaaatcatag-gcttaagaagattgaatgttagtctcacccttaccttaacaa 20453632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 338
Target Start/End: Original strand, 50687342 - 50687563
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| | | |||| |||| | ||| |||||||||| |||||| |||||| || |||   |||||||| |||||  |||    
50687342 catggttttaagcttaacattgattccagatatcaacctatgaattgtctaaggtctataaacagtttctacatcaatctaacaatttttcatcaattaa 50687441  T
215 ttctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  ||||||  || |||| ||||||||| || ||||||| ||||| || |||||| |||||||||| ||| ||||||||||| | | ||||| |||||||    
50687442 tcatcaatttctcccttt-aacctaattctcaaattctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacaga-cttaataagattg 50687538  T
314 aatgttagtctcacccttaccttaa 338  Q
    |||| ||||||||| ||||||||||    
50687539 aatgctagtctcactcttaccttaa 50687563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 340
Target Start/End: Original strand, 21342803 - 21343046
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| ||| |||||||||| |||||| |||||| |||      ||||  ||| ||||||||||||||||| ||||| |||||| || |||       
21342803 acgaaaattcacctattcacatggtttaaagctcaaaactaatttatgtaatcattctatggattatctaaggtctgcaaacaatttctacatcaatcta 21342902  T
196 acaattttccatcatctaattctcaa-ttaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    |||||||| |||||  |||| ||||| ||  ||||||| | ||||||| || ||||||| ||||| || |||||| |||||||||| ||| |||||||||    
21342903 acaatttttcatcaattaat-ctcaaatttctcactttaaccctaattctcaaattctctaaaaccaatcctaca-cttgttaaatttaatcatcagaat 21343000  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaaca 340  Q
    || | | ||||| |  |||||||| ||||| ||||||||||||||||    
21343001 tacaga-cttaatagaattgaatgctagtcccacccttaccttaaca 21343046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 340
Target Start/End: Original strand, 21347668 - 21347911
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| ||| |||||||||| |||||| |||||| |||      ||||  ||| ||||||||||||||||| ||||| |||||| || |||       
21347668 acgaaaattcacctattcacatggtttaaagctcaaaactaatttatgtaatcattctatggattatctaaggtctgcaaacaatttctacatcaatcta 21347767  T
196 acaattttccatcatctaattctcaa-ttaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    |||||||| |||||  |||| ||||| ||  ||||||| | ||||||| || ||||||| ||||| || |||||| |||||||||| ||| |||||||||    
21347768 acaatttttcatcaattaat-ctcaaatttctcactttaaccctaattctcaaattctctaaaaccaatcctaca-cttgttaaatttaatcatcagaat 21347865  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaaca 340  Q
    || | | ||||| |  |||||||| ||||| ||||||||||||||||    
21347866 tacaga-cttaatagaattgaatgctagtcccacccttaccttaaca 21347911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 35981130 - 35981041
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttcta 185  Q
    |||||||||||||||||||| ||||| ||| ||| ||||| ||||     ||||||||| ||||||||||||||||||||||| ||||||    
35981130 acgaaaattcatctaatcacttggtttaaacctttaaactaattcctgtaatcaccctatggattatctaaggtctgtaaacagtttcta 35981041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 369
Target Start/End: Original strand, 14801339 - 14801473
Alignment:
234 aacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcaccctta 332  Q
    |||||||||| |||| ||| |||||||||||||||||| || |||||  ||  |||||||| | |  |||||||||||||||||||||||| |||| |||    
14801339 aacctaatttcccaaattcccaaaactaaacctacaacatgctaaatgcaattatcagaatcacag-gcttaagaagattgaatgttagtcccaccttta 14801437  T
333 ccttaacaaatcaaaaccggaagcctctcttggttct 369  Q
    |||| |  | |||||| ||| ||||||||||||||||    
14801438 cctt-atgattcaaaatcggcagcctctcttggttct 14801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 369
Target Start/End: Original strand, 14810213 - 14810347
Alignment:
234 aacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcaccctta 332  Q
    |||||||||| |||| ||| |||||||||||||||||| || |||||  ||  |||||||| | |  |||||||||||||||||||||||| |||| |||    
14810213 aacctaatttcccaaattcccaaaactaaacctacaacatgctaaatgcaattatcagaatcacag-gcttaagaagattgaatgttagtcccaccttta 14810311  T
333 ccttaacaaatcaaaaccggaagcctctcttggttct 369  Q
    |||| |  | |||||| ||| ||||||||||||||||    
14810312 cctt-atgattcaaaatcggcagcctctcttggttct 14810347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 378
Target Start/End: Original strand, 51083105 - 51083266
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||||||||||||||||||| |||||  | ||||||||||| ||||| |||||||| ||||||||| ||   ||| ||| ||| | |||||||  |||||    
51083105 tcaattaatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcaaaatcataga-cttaagattattga 51083203  T
315 atgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttcttctc 378  Q
    ||||||||| |||||||||||||| |||||  | | || ||||||||||||||||  |||||||    
51083204 atgttagtcccacccttaccttaataaatc-gatcaggcagcctctcttggttcttctcttctc 51083266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 378
Target Start/End: Complemental strand, 14237776 - 14237615
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||| |||| |||||||||| |||||  | ||||||||||| ||||| |||||||| ||||||||| ||   ||||||| ||| | |||||||  |||||    
14237776 tcaaataattacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcataga-cttaagattattga 14237678  T
315 atgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttcttctc 378  Q
    || |||||| |||||||||||||| ||||| || | || ||||||||||||||||  |||||||    
14237677 atattagtcccacccttaccttaataaatc-aatcaggcagcctctcttggttcttctcttctc 14237615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 346
Target Start/End: Complemental strand, 16274674 - 16274564
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||||||||||| ||||||||  ||   ||| ||| ||| | || ||||  |||||||||||||||||||||||||    
16274674 cctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcaaaatcataga-ctcaagattattgaatgttagtctcacccttacc 16274576  T
335 ttaacaaatcaa 346  Q
    |||| |||||||    
16274575 ttaagaaatcaa 16274564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 337
Target Start/End: Original strand, 16759467 - 16759645
Alignment:
159 ttatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaa 257  Q
    |||||||||||||||||||| |||||| || |||   ||| || | |||||  |||| |||||||  ||||||| | ||||||| ||||| ||||| ||     
16759467 ttatctaaggtctgtaaacagtttctacatcaatctaacagttctacatcaattaatcctcaatttctcactttaaccctaattctccaacttctctaat 16759566  T
258 ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
      || ||||| |||||||||||  ||| || ||||||||| || |||| |  |||||||| |||||||||||||||||||    
16759567 tcaatcctac-acttgttaaatacaactataagaattatacagattaatagaattgaatgctagtctcacccttacctta 16759645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 341
Target Start/End: Complemental strand, 21857269 - 21857084
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctca 254  Q
    |||||||||||||| |||||||| |||||| || |||   || ||| | |||||  |||| |||||||  || |||| | ||||||||||||| |||||     
21857269 ggattatctaaggtttgtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaatttctctctttaaccctaattttccaacttctct 21857170  T
255 aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    ||   || |||||| |||| |||||  || ||||||||||||| || |||| |  |||||||  |||||||||||||||||||||||    
21857169 aattcaatcctaca-cttgctaaatacaatcatcagaattatataggttaatataattgaattctagtctcacccttaccttaacaa 21857084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Complemental strand, 22130063 - 22130025
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||| ||||||||||||||    
22130063 gcttaagaagattgaatgttagtcccacccttaccttaa 22130025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 337
Target Start/End: Original strand, 26065847 - 26065913
Alignment:
271 ttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||  |||||||||||||||| | ||||| |  |||||||| |||||||||||||||||||    
26065847 ttgttaaatacaaccatcagaattatacaacttaatagaattgaatgctagtctcacccttacctta 26065913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 42697726 - 42697836
Alignment:
228 acttttaacctaattttccaattctcaaaacta-aacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctca 326  Q
    ||||||||||||||| || ||| |||||||||| |||||||||| ||||||||| ||   ||||||||||| | ||||  |  |  ||| ||||||||||    
42697726 acttttaacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtctca 42697825  T
327 cccttacctta 337  Q
    |||||||||||    
42697826 cccttacctta 42697836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 45755465 - 45755515
Alignment:
231 tttaacctaattttccaattctcaaaacta-aacctacaacttgttaaatc 280  Q
    |||||||||||| || |||||||||||||| ||||||||||||||||||||    
45755465 tttaacctaattctcaaattctcaaaactacaacctacaacttgttaaatc 45755515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 40390150 - 40390246
Alignment:
241 ttttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||| ||||||| ||||| || |||||| ||||||||||  || ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
40390150 ttttcaaattctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 40390246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 43629333 - 43629296
Alignment:
301 cttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||| ||||||||||||||||||||||||||||||||    
43629333 cttaataagattgaatgttagtctcacccttaccttaa 43629296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 45574057 - 45574020
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
45574057 gcttaagaagattgaatgttagtcccacccttacctta 45574020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 13212260 - 13212192
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||  || ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
13212260 acttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 13212192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 15859416 - 15859316
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||||||||||| |||||||  ||| ||||||||||| | | ||||| |  ||| |||| ||||||||||||||||    
15859416 cctaattctcaaattctcaaaaactaaacctacaacatgttaaa--taatcatcagaattacaga-cttaatagaattaaatgctagtctcacccttacc 15859320  T
335 ttaa 338  Q
    ||||    
15859319 ttaa 15859316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 25262301 - 25262226
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    |||||||||||  ||| |||||||||||| || |||| |  |||||||| |||||||||||||| ||||| |||||    
25262301 acttgttaaatacaactatcagaattatacagattaatagaattgaatgctagtctcacccttatcttaagaaatc 25262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 14294828 - 14294728
Alignment:
236 cctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||| ||||| || |||||| |||||||||| ||| ||||||||||| | | ||||| |  |||||||| ||||||||||||||||    
14294828 cctaattctcaaattctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacaga-cttaatagaattgaatgctagtctcacccttacc 14294731  T
335 tta 337  Q
    |||    
14294730 tta 14294728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 51131408 - 51131508
Alignment:
236 cctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||| ||||| || |||||| |||||||||| ||| ||||||||||| | | ||||| |  |||||||| ||||||||||||||||    
51131408 cctaattctcaaattctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacaga-cttaatagaattgaatgctagtctcacccttacc 51131505  T
335 tta 337  Q
    |||    
51131506 tta 51131508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 8761082 - 8761045
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagc 127  Q
    |||||||||||||||||||||||| |||||||| ||||    
8761082 ttttctacgaaaattcatctaatctcatggttctaagc 8761045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 11946407 - 11946493
Alignment:
251 ctcaaaacta-aacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||| |||||||||| ||||||||| ||   ||||||||||| | |||||||  | |||||| ||||||||||||||||||||    
11946407 ctcaaaactataacctacaacatgttaaatccaatt-tcagaattataga-cttaagatcactgaatgatagtctcacccttaccttaa 11946493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 21473794 - 21473846
Alignment:
285 catcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
21473794 catcagaattatatagattaatagaattgaatgctagtctcacccttacctta 21473846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 21841683 - 21841719
Alignment:
301 cttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||  ||||||||||||||||||||||||||||    
21841683 cttaagattattgaatgttagtctcacccttacctta 21841719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 52927304 - 52927252
Alignment:
285 catcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||| ||| || |||| |  ||||||||||||||||||||||||||||    
52927304 catcagaatcatataggttaatagaattgaatgttagtctcacccttacctta 52927252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 4e-88; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 99 - 374
Target Start/End: Original strand, 27845372 - 27845645
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||| |||||||||| || |||||||||    
27845372 aaaatccacctaatcacatggttcaaagcttaaaactgattctaaacatcatcctatggattatctaaggtatgtatacactttctacatcaattctaca 27845471  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattata 297  Q
    | ||||||||||||||| ||||||| |||||||||||||  | |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||    
27845472 aatttccatcatctaatcctcaatt-atcacttttaaccctaatttccaattctcaaaaactaatcctacaacttgttaaatctaatcatcagaattata 27845570  T
298 aagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttct 374  Q
     | |||||||| |||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||    
27845571 ga-cttaagaaaattgaatgttagtctcacccttaccttaac-aatcgaaatcggcagcctctcttggttctcttct 27845645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 90 - 344
Target Start/End: Original strand, 26393128 - 26393381
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatata 189  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||     
26393128 ttttctacaaaaattcacctaatcacatggttcaaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtatacactttctacatc 26393227  T
190 aattctacaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatc 288  Q
    |||||  ||||| | |||||||||    |||||| | |||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
26393228 aattcagcaattctacatcatctatccatcaattca-cactcttaaccctaattttccaattctcaaaactaaacctacaacttgttaaatttaatcatc 26393326  T
289 agaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    ||||||| | | |||||||  |||||||||||||||||||||||||||||||||||    
26393327 agaattacaga-cttaagagaattgaatgttagtctcacccttaccttaacaaatc 26393381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 95 - 344
Target Start/End: Complemental strand, 18546384 - 18546136
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| || |||||    
18546384 tacgaaaatccacctaatctcatggttcaaagcttaaaactgattctaaacatcaccatatggattatctaaggtctgtacacactttctacatcaattc 18546285  T
195 tacaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||||||||||||||| ||||||| |||||| |||| |||||||||| | ||   |||||||| ||||||||||| ||||||||| |||||||||    
18546284 tacaagtttccatcatctaatcctcaatt-atcactcttaaccctaattttcaactttcaaaaactaatcctacaacttgctaaatctaatcatcagaat 18546186  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    |||| | |||||||| |||||| ||||||||||||||||||||||||||||    
18546185 tataga-cttaagaaaattgaacgttagtctcacccttaccttaacaaatc 18546136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 90 - 369
Target Start/End: Complemental strand, 43946764 - 43946487
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatata 189  Q
    |||| ||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||     
43946764 ttttttacgaaaatccacctaatcacatggttcaaagcttaaaactgattcaaaacatcaccctatggattatctaaggtctgtatacactttctacatc 43946665  T
190 aattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatc 288  Q
    | ||||||||  || ||||||||||| |||||||  ||||| ||||||  | ||||||||||| ||||||||| |||||||| ||||||||||||  |||    
43946664 agttctacaaaatttcatcatctaatcctcaatt-ctcactcttaaccctaatttccaattctccaaaactaatcctacaacatgttaaatctaattatc 43946566  T
289 agaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttct 369  Q
    ||||| || | ||||||||| |||||||||| |||| ||||||||||| |  | |||||| ||| ||||||||||||||||    
43946565 agaatcat-aggcttaagaaaattgaatgtttgtcttacccttacctt-atgattcaaaatcggcagcctctcttggttct 43946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 98 - 336
Target Start/End: Original strand, 34137678 - 34137915
Alignment:
98 gaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctac 197  Q
    |||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| || || |||||    
34137678 gaaaatgcacctaatcacatggttctaagcttaaaactgattcgaaacatcaccctatggattatctaaggtctgtacacactttctacatcaaatctac 34137777  T
198 aattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattat 296  Q
     | ||||||||||||||  ||||||| |||||| ||||||  | |||||||||||| |||||||| |||||||| |||||||||||| ||||||||| ||    
34137778 gagtttccatcatctaaccctcaatt-atcactcttaaccctaatttccaattctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcat 34137876  T
297 aaagcttaagaagattgaatgttagtctcacccttacctt 336  Q
     | |||||||||||||||||||||||  ||||||||||||    
34137877 -aggcttaagaagattgaatgttagttccacccttacctt 34137915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 95 - 338
Target Start/End: Complemental strand, 39827436 - 39827194
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| |||| || |||||||||| |||| |||||||||||||||||||||||||| |||||||||||||| |||| |||||  ||| || | |||    
39827436 tacgaaaatccatcaaaacacatggttctaagcataaaactgattctaaacatcaccctatggattatctaaggtttgtacacactacctacatcatttc 39827337  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    || || ||||||||||| ||| ||||||| |||||| ||||||  | |||||||||||| |||||||| |||||||| |||||||||||| |||||||||    
39827336 tataagtttccatcatccaatcctcaatt-atcactcttaaccctaatttccaattctcaaaaactaaccctacaacatgttaaatctaatcatcagaat 39827238  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
     || | ||||||||||||||||| |||||| ||||||||||||||    
39827237 cat-aggcttaagaagattgaatcttagtcccacccttaccttaa 39827194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 96 - 338
Target Start/End: Original strand, 25109601 - 25109841
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||     |||| |||| ||||||||||||||||||| ||| |||||| || |||       
25109601 acgaaaattcacctaatcacatggtttaaaccttaaaactgattcctgtaatcatcctatggattatctaaggtctgtacacattttctacatcaatcta 25109700  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||| |||||  ||||  ||||||  |||||||| |||||||| |||||||||| ||||||||  |||| ||||||||||| ||| ||||||||||    
25109701 acaacttttcatcaattaatcatcaatttctcactttt-acctaattctccaattctctaaaactaattctac-acttgttaaatttaatcatcagaatt 25109798  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    | | | ||||| |  |||||||| ||||||||||||||||||||    
25109799 acaga-cttaatagaattgaatgctagtctcacccttaccttaa 25109841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 95 - 342
Target Start/End: Complemental strand, 22458929 - 22458685
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||    |||| |||| ||||||||||||||||||||||| |||||| || |||      
22458929 tacgaaaattcacctaatcacatggtttaaaccttaaaactgattcttgtaatcatcctatggattatctaaggtctgtaaacagtttctacatcaatct 22458830  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
     |||| ||| |||||  ||||| ||||||  |||| |||||| ||||| ||||| ||||  | | ||| || || ||||||||||| ||| |||||||||    
22458829 aacaacttttcatcaattaattatcaattcctcac-tttaacataattctccaacttctatagattaatcccac-acttgttaaat-taatcatcagaat 22458733  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    || | | ||||| || |||||||| ||||||||||||||||||| ||||    
22458732 tacaga-cttaataaaattgaatgctagtctcacccttaccttagcaaa 22458685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 115 - 337
Target Start/End: Original strand, 23005502 - 23005722
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||||| | |||| |||| ||||||||||||||||||||||| |||||| |||||||  |||||||| |||||  |||    
23005502 catggttttaagcttaacattgattctagatatcaacctatggattatctaaggtctgtaaacagtttctacataaatttaacaatttttcatcaattaa 23005601  T
215 ttctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  ||||||  || | |||||||||||| || ||||||| |||||||| ||||| |||| |||||| ||| ||||| ||||| | | ||||| |  ||||    
23005602 tcatcaatttctc-cctttaacctaattctcaaattctctaaaactaatcctac-acttcttaaatttaatcatcaaaattacaga-cttaatagaattg 23005698  T
314 aatgttagtctcacccttacctta 337  Q
    |||| |||||||||||||||||||    
23005699 aatgctagtctcacccttacctta 23005722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 245 - 341
Target Start/End: Complemental strand, 22173069 - 22172975
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    |||||||||||| |||||||| |||| ||||||||||||  |||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||    
22173069 ccaattctcaaa-ctaaacctccaacatgttaaatctaattatcataatcatag-gcttaagaagattgaatgttagtctcacccttaccttaacaa 22172975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 7187395 - 7187477
Alignment:
255 aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||||||||| |||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||||||||||||||||||    
7187395 aaactaaacctccaacatgttaaatctaattatcagaatcatag-gcttaagaagattgaatgttagtctcacccttaccttaa 7187477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 18786251 - 18786162
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttcta 185  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||     |||| |||| ||||||||||||||||||||||| ||||||    
18786251 acgaaaattcacctaatcacatggtttaaatcttaaaactgattcatgtaatcatcctatggattatctaaggtctgtaaacagtttcta 18786162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 22412554 - 22412315
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| ||||||||||||||  |||||||| | ||||||     |||| | || ||||||||||||||||||||||| |||||| || ||| |     
22412554 acgaaaattcacctaatcacatggttttaagcttaacattgattcctgtaatcatcatatggattatctaaggtctgtaaacagtttctacatcaatcca 22412455  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    |||| | | |||||  ||||  ||||||  ||||||| | |||||||| | | ||||| ||  ||| |||||| ||||||||||  | ||||||||||||    
22412454 acaaatctacatcaattaatcatcaatttctcactttaaccctaatttccaacttctctaatttaatcctaca-cttgttaaataca-ccatcagaatta 22412357  T
296 taaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    || || |||| |  |||||||| |||||||||||||| ||||    
22412356 tacagattaacataattgaatgctagtctcacccttatctta 22412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 337
Target Start/End: Complemental strand, 20519542 - 20519321
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| | | |||| |||| ||||| |||||||||| |||||| |||||| || |||   |||||| | |||||  |||    
20519542 catggttttaagcttaacattgattccagatatcatcctatggattgtctaaggtctataaacagtttctacatcaatctaacaattctacatcaattaa 20519443  T
215 ttctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |  ||||||  ||||||| | |||||||| | | ||||| ||| ||| |||||| ||||||| ||   ||||||||||||||| | ||||| |  |||||    
20519442 tcatcaatttctcactttaaccctaatttccaacttctctaaattaatcctaca-cttgttagataccaccatcagaattatacaacttaatagaattga 20519344  T
315 atgttagtctcacccttacctta 337  Q
    ||| |||||||||||||||||||    
20519343 atgctagtctcacccttacctta 20519321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 338
Target Start/End: Original strand, 23792007 - 23792247
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||||||   |||||||  ||||||||   |||||| | | |||| |||| |||||  |||||||||||| ||| |||||| || |||       
23792007 acgaaaatccatctaaaggcatggttttaagcttaacgttgattccagatatcaacctaaggattgcctaaggtctgtacacagtttctacatcaatcta 23792106  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    |||||||| |||||  ||||  ||||||  ||||||| | |||||||| | | ||||| ||| ||| | |||| |||||||||| ||| |||||||||||    
23792107 acaatttttcatcaattaatcatcaatttctcactttaaccctaatttccaacttctctaaattaatcataca-cttgttaaatttaatcatcagaatta 23792205  T
296 taaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
     | | ||||| ||||||||||| ||| ||||||||||||||||    
23792206 caga-cttaataagattgaatgctaggctcacccttaccttaa 23792247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 31346134 - 31346172
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||||||||||||||||||    
31346134 gcttaagaagattgaatgttagtctcacccttaccttaa 31346172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 24941586 - 24941652
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||||| ||||||||||||| |||||||||||||||||    
24941586 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgtttgtctcacccttacctta 24941652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 43138262 - 43138328
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | || || |||||||||||||||||||||||||||||||    
43138262 cttgttaaatttaatcatcagaattacagacct-aataagattgaatgttagtctcacccttacctta 43138328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 5986119 - 5986189
Alignment:
228 acttttaacctaattttccaattctcaaaacta-aacctacaacttgttaaatctaaccatcagaattata 297  Q
    ||||||||||||||| || ||| |||||||||| |||||||||||||||||||| ||   |||||||||||    
5986119 acttttaacctaattctcaaatcctcaaaactataacctacaacttgttaaatccaattttcagaattata 5986189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 24682196 - 24682285
Alignment:
254 aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    ||||||||||||||||| ||||||||  ||   ||||||| ||| | |||||||  |||||||||||||| |||||||||||||| |||||    
24682196 aaaactaaacctacaacatgttaaatacaattttcagaatcataga-cttaagattattgaatgttagtcccacccttaccttaagaaatc 24682285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 23375733 - 23375808
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgta 174  Q
    |||||||| | |||| |||||||| || ||||||||||||||||||||| | |||| | ||  |||||||||||||    
23375733 aaaattcacccaatcccatggttctaaccttaaaactgattctaaacattaacctatgaatcttctaaggtctgta 23375808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 341
Target Start/End: Complemental strand, 24528894 - 24528863
Alignment:
310 attgaatgttagtctcacccttaccttaacaa 341  Q
    ||||||||||||||||||||||||||||||||    
24528894 attgaatgttagtctcacccttaccttaacaa 24528863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Complemental strand, 23079911 - 23079873
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||||||| |||||||||||||| ||||||||||||||    
23079911 gcttaagaaaattgaatgttagtcccacccttaccttaa 23079873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 26506206 - 26506327
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||| ||||||||||||||| |||||  | ||||||||||| ||||| |||||||| ||||||||| ||    ||||||||   | |||||||  |||||    
26506206 tcaaataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaattaatga-cttaagattattga 26506304  T
315 atgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||    
26506305 atgttagtctcacccttacctta 26506327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 337
Target Start/End: Complemental strand, 27920099 - 27919978
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||| ||||||||||||||| |||||  | ||||||||||| ||||| |||||||| ||||||||| ||    ||||||||   | |||||||  |||||    
27920099 tcaaataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaattaatga-cttaagattattga 27920001  T
315 atgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||    
27920000 atgttagtctcacccttacctta 27919978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 21917765 - 21917728
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagc 127  Q
    |||||||||||||||||||||||| ||||||| |||||    
21917765 ttttctacgaaaattcatctaatctcatggtttaaagc 21917728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 19672753 - 19672820
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||| ||| ||||||||||| | | ||||| |  |||||||| |||||||||||||||||||    
19672753 acttgttaaatttaatcatcagaattacaga-cttaatagaattgaatgctagtctcacccttacctta 19672820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 19688216 - 19688184
Alignment:
90 ttttctacgaaaattcatctaatcacatggttc 122  Q
    ||||||||||||| |||||||||||||||||||    
19688216 ttttctacgaaaaatcatctaatcacatggttc 19688184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 26508769 - 26508805
Alignment:
301 cttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||  ||||||||||||||||||||||||||||    
26508769 cttaagattattgaatgttagtctcacccttacctta 26508805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 160; Significance: 4e-85; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 96 - 342
Target Start/End: Original strand, 2458 - 2701
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| || ||||||    
2458 acgaaaattcatctaatcacatggttctaagcttaaaactgattctaaacatcaccctatggattatctatggtctgtatacactttctacatcaattct 2557  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
     ||| |||||||||||||||  | |||| ||||||||||||| |||||  |||||||||||||||||| ||| ||||||||||||||| |||||||||||    
2558 ccaaatttccatcatctaatcatgaattgatcacttttaaccaaattt--caattctcaaaactaaacttacgacttgttaaatctaatcatcagaatta 2655  T
296 taaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    || | ||||||||||||||||||||||||||||||||||||||||||    
2656 taga-cttaagaagattgaatgttagtctcacccttaccttaacaaa 2701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 158; Significance: 6e-84; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 95 - 337
Target Start/End: Original strand, 333047 - 333289
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| || |||||    
333047 tacgaaaatccacctaatcacatggttcaaagcttaaaactgattctaaacatcaccctatggattatctaaggtctataaacactttctacatcaattc 333146  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc--aaaactaaacctacaacttgttaaatctaaccatcagaa 292  Q
    ||||| ||||||||||||||| ||||||| |||||||| | ||||| ||||||||||||  |||||||| ||||||||||||||||||||| ||||||||    
333147 tacaagtttccatcatctaatcctcaattgatcactttaaccctaa-tttccaattctcaaaaaactaatcctacaacttgttaaatctaatcatcagaa 333245  T
293 ttataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||| | |||||||| ||||||||||||||||||||||||||||    
333246 ttataga-cttaagaaaattgaatgttagtctcacccttacctta 333289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 204570 - 204511
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgta 174  Q
    |||||||| || ||||||||||||||||||||||| || | | || ||||||||||||||    
204570 catggttctaaccttaaaactgattctaaacatcatcccatgaatcatctaaggtctgta 204511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 2e-83; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 95 - 342
Target Start/End: Complemental strand, 11768330 - 11768085
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||    
11768330 tacgaaaatccacctaatcacatggttctaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtaaacactttctacatcaattc 11768231  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||| ||||||| | || |||||||||||||| || |||||||||||| |||||||||    
11768230 tacaagtttccatcatctaatcctcaattgatcacttttaacctaa-tttccaactttcaaaaactaaacctac-acatgttaaatctaatcatcagaat 11768133  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    ||| | |||||||||||||||||||||||| ||||||||||||||||||    
11768132 tat-aggcttaagaagattgaatgttagtcccacccttaccttaacaaa 11768085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 95 - 344
Target Start/End: Complemental strand, 11525040 - 11524792
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || ||||||||||| ||| |||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| || |||||    
11525040 tacgaaaatccacctaatcacatgcttctaagcttaaaactgattctaaacatcaccatatggattatctaaggtatgtaaacactttctacatcaattc 11524941  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    ||||| ||||||||||| ||| ||||||| ||||||| |||||  | |||||||||||||||||||||||| ||||||| ||||||||| | | ||||||    
11524940 tacaaatttccatcatcaaatcctcaattgatcacttataaccctaatttccaattctcaaaactaaaccttcaacttgctaaatctaatctttagaatt 11524841  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||    
11524840 at-aagcttaagaaaattgaatgttagtctcacccttaccttaacaaatc 11524792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 99 - 338
Target Start/End: Complemental strand, 37793627 - 37793391
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    ||||| || |||||| ||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| ||||| || |||||||||    
37793627 aaaatccacctaatctcatggttcaaagcttaaaactgattttaaacatcaccatatggattatctaaggtctgtaaacaccttctacatcaattctaca 37793528  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataa 298  Q
    | ||| || |||||| | ||||||| |||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||||| |     
37793527 agttttcaccatctactcctcaattgatcacttttaacctaa-tttccaatt-tccaaactaaacctacaacttgttaaatctaatcatcagaatta-ac 37793431  T
299 agcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
     |||||||||||||||||||||||| ||||||||||||||    
37793430 ggcttaagaagattgaatgttagtcccacccttaccttaa 37793391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 42462683 - 42462923
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||| | || ||||||    
42462683 acgaaaatgcatcaaatcacatggttctaagcttaaaactgattctaaacatcaccctatggattatctaaggtctatacacactttcaacatcaattct 42462782  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||| | |||||||||||  |||||||| |||||||| |||||||||||| |||||||||     
42462783 acaagtttccatcatctaatcctcaatt-atcactcttaaccttaatttccaattctaaaaaactaaccctacaacatgttaaatctaatcatcagaatc 42462881  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    || | |||||||||||||||||||||||| |||||||||||||    
42462882 at-aggcttaagaagattgaatgttagtcccacccttacctta 42462923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 130182 - 129943
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| || ||||||    
130182 acgaaaatgcatcgaatcacatggttctaagcttaaaactgattctaaacatcaccctatggattatctatggtctgtacacactttctacatcaattct 130083  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||  | |||||||||||| |||||||| | |||||| |||||||||||| |||||||||     
130082 acaagtttccatcatctaatcctcaatt-atcactcttaaccctaatttccaattctcaaaaactaaccatacaacatgttaaatctaatcatcagaatc 129984  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    || ||||||||| |||||||||||||||| |||||||||||||    
129983 at-aagcttaag-agattgaatgttagtcccacccttacctta 129943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 95 - 338
Target Start/End: Original strand, 16996903 - 16997145
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| |||| || |||||||||  |||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| || |||||    
16996903 tacgaaaatccatcaaaacacatggttttaagcttaaaactgattctaaacatcaccttatggattatctaaggtctgtacacactttctacatcaattc 16997002  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||  | ||| |||||||  |||||||| |||||||| |||||||||||| |||||||||    
16997003 tacaagtttccatcatctaatcctcaatt-atcactcttaaccctaatttacaattctaaaaaactaaccctacaacatgttaaatctaatcatcagaat 16997101  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
     || | |||||||||||||||||||||||| ||||||||||||||    
16997102 cat-aggcttaagaagattgaatgttagtcccacccttaccttaa 16997145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 96 - 327
Target Start/End: Complemental strand, 9032755 - 9032526
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| |||| |||||||||| || ||||||    
9032755 acgaaaattcatctaatcacatggttctaagcttaaaactgattctaaacatca-cctatggattatctaaggtatgtatacactttctacatcaattct 9032657  T
196 acaattttccatcatctaatt-ctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    |||| |||| ||||||||||| ||||||| |||||||||||||||| |||| ||||||| |||||||||||||  || ||||||||||||  ||||||||    
9032656 acaagtttctatcatctaattcctcaattgatcacttttaacctaa-tttcaaattctcaaaaactaaaccta-gacatgttaaatctaataatcagaat 9032559  T
294 tataaagcttaagaagattgaatgttagtctcac 327  Q
     || | ||||||||| ||||||||||||||||||    
9032558 cat-aggcttaagaaaattgaatgttagtctcac 9032526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 95 - 342
Target Start/End: Complemental strand, 17016835 - 17016592
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
17016835 tacgaaaatccacctaatctcatggttcaaagcttaaaattgattctaaacatcaccctacggattatctaaggtctgtaaacactttctacatcaattc 17016736  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    ||| ||| | ||||||||||   ||||||  ||||| ||||||  | ||||||| | |||||||| ||||||| || |||||||||||| ||||||||||    
17016735 taccattctacatcatctaaccatcaatt-ctcactcttaaccctaatttccaactttcaaaact-aacctac-acatgttaaatctaatcatcagaatt 17016639  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    ||  |||||||||  |||||||| ||||||||||||||||||||||||    
17016638 at-cagcttaagagaattgaatgctagtctcacccttaccttaacaaa 17016592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 348
Target Start/End: Original strand, 14036930 - 14037180
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||  ||||||||  |||||||| | |||||| ||| |||| ||||  |||||||||||||||||||||| |||||| || |||       
14036930 acgaaaatccacctaaagacatggttttaagcttaacattgattccaaatatcaacctattgattatctaaggtctgtaaacagtttctacatcaatcta 14037029  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||||||| |||||  ||||  ||||||  |||| |||||||||||| |||| || || |||||||| ||||| |||||||||||  |||||||||||||    
14037030 acaatttttcatcaattaatcatcaattcctcac-tttaacctaattctccatttttctaaaactaatcctac-acttgttaaatacaaccatcagaatt 14037127  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaa 348  Q
    | | | ||||| |  |||||||| |||||||||||||||||||| || ||||||    
14037128 acaga-cttaatagaattgaatgctagtctcacccttaccttaagaattcaaaa 14037180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 348
Target Start/End: Original strand, 14346960 - 14347210
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||  ||||||||  |||||||| | |||||| ||| |||| ||||  |||||||||||||||||||||| |||||| || |||       
14346960 acgaaaatccacctaaagacatggttttaagcttaacattgattccaaatatcaacctattgattatctaaggtctgtaaacagtttctacatcaatcta 14347059  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||||||| |||||  ||||  ||||||  |||| |||||||||||| |||| || || |||||||| ||||| |||||||||||  |||||||||||||    
14347060 acaatttttcatcaattaatcatcaattcctcac-tttaacctaattctccatttttctaaaactaatcctac-acttgttaaatacaaccatcagaatt 14347157  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaa 348  Q
    | | | ||||| |  |||||||| |||||||||||||||||||| || ||||||    
14347158 acaga-cttaatagaattgaatgctagtctcacccttaccttaagaattcaaaa 14347210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 337
Target Start/End: Complemental strand, 15007839 - 15007649
Alignment:
146 atcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttc 245  Q
    |||| |||| ||||||||||||||||||||||| |||||| || |||   |||| ||| |||||  |||| |||||||  ||||||| | |||||||| |    
15007839 atcatcctatggattatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatcaattaatcctcaatttctcactttaaccctaatttcc 15007740  T
246 caattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     | ||||| ||| ||| |||||| ||||||||||  |||||||||||||||| | ||||| |  |||||||| |||||||||||||||||||    
15007739 aacttctctaaattaatcctaca-cttgttaaatacaaccatcagaattatacaacttaatagaattgaatgctagtctcacccttacctta 15007649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 15203003 - 15203130
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||| ||| || |||||||||||||| ||  |||| |||| ||||||||||||||||||| ||| |||||| || ||||| ||| ||||||||||    
15203003 aatctcatgtttctaaccttaaaactgattccaactatcatcctatggattatctaaggtctgtacacagtttctacatcaattcaacagttttccatca 15203102  T
210 tctaattctcaattaatcacttttaacc 237  Q
    |||||| ||||||| |||||||||||||    
15203103 tctaatcctcaattcatcacttttaacc 15203130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 12902080 - 12902321
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| |||| |||||||||  |||||||| | ||||||     |||| |||| ||||||||||||||||||||||| |||||| || |||       
12902080 acgaaaattcacctaaacacatggttttaagcttaatattgattcctgtaatcatcctatggattatctaaggtctgtaaacagtttctacatcaatcta 12902179  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaa-cctacaacttgttaaatctaaccatcagaatt 294  Q
    |||||| | |||||  |||| ||||| |  |||| || | ||||||| |||||||||| ||| | || |||||| ||||| ||||  ||||||| |||||    
12902180 acaattctacatcaattaatcctcaacttctcaccttaaccctaattctccaattctctaaaatcaatcctaca-cttgtcaaatacaaccatccgaatt 12902278  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||| ||||||| |  |||||||| |||||||||||||||||||    
12902279 atatagcttaatagaattgaatgctagtctcacccttacctta 12902321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 115 - 338
Target Start/End: Complemental strand, 1867453 - 1867232
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| ||| ||||  ||| ||||||||||||||||||||||| |||||| || |||   ||| |||| |||||  |||    
1867453 catggttttaagcttaacattgattccaaatatcaaactatggattatctaaggtctgtaaacagtttctacatcaatctaacactttttcatcaattaa 1867354  T
215 ttctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  ||||||  |||| |||||||| ||| ||||||| || |||||||| ||||| |||||||||||  ||| |||||||||| | | ||||| |||||||    
1867353 tcatcaattcctcac-tttaacctgattctccaattgtctaaaactaatcctac-acttgttaaatacaactatcagaattacaga-cttaataagattg 1867257  T
314 aatgttagtctcacccttaccttaa 338  Q
    ||||||||||||  |||||||||||    
1867256 aatgttagtctcgtccttaccttaa 1867232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 18455680 - 18455589
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||| |||||||| |||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
18455680 ccaattctcaaa-ctaaacctccaacatgttaaatctaattatcagaatcatat-gcttaagaagattgaatgttagtcccacccttaccttaa 18455589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 334
Target Start/End: Original strand, 38519602 - 38519732
Alignment:
205 catcatctaattctcaattaatcacttttaacctaattttccaattctcaaaa---ctaaacctacaacttgttaaatctaaccatcagaattataaagc 301  Q
    |||||||||||  ||||||| ||||| ||||||  | |||| |||||||||||   ||||||||||||| || |||||||||  |||||||| |||  ||    
38519602 catcatctaatcatcaatta-tcactcttaaccctaatttcaaattctcaaaaaaactaaacctacaacatgctaaatctaattatcagaatcatag-gc 38519699  T
302 ttaagaagattgaatgttagtctcacccttacc 334  Q
    |||||||||||||||||||||| ||||||||||    
38519700 ttaagaagattgaatgttagtcccacccttacc 38519732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 338
Target Start/End: Original strand, 14045521 - 14045742
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| | | |||| |||| |||||||| |||||||||||||| |||||| || ||    |||||||| |||||  |||    
14045521 catggttttaagcttaacattgattccagatatcaacctatggattatccaaggtctgtaaacagtttctacatcaacctaacaatttttcatcaattaa 14045620  T
215 ttctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  ||||||  |||| |||||||||||| ||||||| || |||||||| ||||| ||||||||| |  |||||||||||||| | | ||||| |  ||||    
14045621 tcatcaattcctcac-tttaacctaattctccaattttctaaaactaatcctac-acttgttaagtacaaccatcagaattacaga-cttaatagaattg 14045717  T
314 aatgttagtctcacccttaccttaa 338  Q
    |||| |||||||||| |||||||||    
14045718 aatgctagtctcacctttaccttaa 14045742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 338
Target Start/End: Original strand, 14355551 - 14355772
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| | | |||| |||| |||||||| |||||||||||||| |||||| || ||    |||||||| |||||  |||    
14355551 catggttttaagcttaacattgattccagatatcaacctatggattatccaaggtctgtaaacagtttctacatcaacctaacaatttttcatcaattaa 14355650  T
215 ttctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  ||||||  |||| |||||||||||| ||||||| || |||||||| ||||| ||||||||| |  |||||||||||||| | | ||||| |  ||||    
14355651 tcatcaattcctcac-tttaacctaattctccaattttctaaaactaatcctac-acttgttaagtacaaccatcagaattacaga-cttaatagaattg 14355747  T
314 aatgttagtctcacccttaccttaa 338  Q
    |||| |||||||||| |||||||||    
14355748 aatgctagtctcacctttaccttaa 14355772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 342
Target Start/End: Original strand, 15117201 - 15117444
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||||||  ||||||||||||| ||| |||||| || ||||     ||||||||| |||||||||||||||| |||||| |||||| || ||| ||    
15117201 acgaaaattcacttaatcacatggtttaaaccttaaatctaattcatgtaatcaccctatggattatctaaggtctataaacagtttctacatcaat-ct 15117299  T
196 a-caattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    | ||| |||  ||||  ||||  | ||||  ||||||| ||||||||| ||||| ||||| ||| ||| |||||| |||||||||| ||| ||||||||     
15117300 atcaacttttaatcaattaatcataaattcctcacttt-aacctaattctccaacttctctaaattaatcctaca-cttgttaaat-taatcatcagaag 15117396  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    || | | ||||| ||||||||||| ||||||||||||||||||| ||||    
15117397 tacaga-cttaataagattgaatgctagtctcacccttaccttagcaaa 15117444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 342
Target Start/End: Original strand, 16324738 - 16324926
Alignment:
151 cctacggattatctaaggtctgtaaacactttctatataaattcta-caattttccatcatctaattctcaattaatcacttttaacctaattttccaa- 248  Q
    |||| |||||||||||| |||||||||| |||||| || || |||| ||| ||| |||||  ||||  ||||||  |||| |||||||||||| |||||     
16324738 cctatggattatctaagatctgtaaacagtttctacatcaa-tctatcaacttttcatcaattaatcatcaattcctcac-tttaacctaattctccaac 16324835  T
249 ttctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    ||||| ||| ||| ||||| ||||||||||| ||| |||||||| || | | ||||| ||||||||||| ||||||||||||||||||| ||||    
16324836 ttctctaaattaatcctac-acttgttaaat-taatcatcagaagtacaga-cttaataagattgaatgctagtctcacccttaccttagcaaa 16324926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 374
Target Start/End: Complemental strand, 17052826 - 17052723
Alignment:
272 tgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa--caaatcaaaaccggaagcctctcttggttct 369  Q
    |||||||||||| ||||| ||||||   |||||||||||||||||||||||| ||||||||||||||   ||||| ||| ||| ||||||||||| || |    
17052826 tgttaaatctaatcatcaaaattatcg-gcttaagaagattgaatgttagtcccacccttaccttaatcaaaatcgaaatcggcagcctctcttgatttt 17052728  T
370 cttct 374  Q
    |||||    
17052727 cttct 17052723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 10062949 - 10062883
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||||    
10062949 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctta 10062883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 337
Target Start/End: Complemental strand, 12255172 - 12254995
Alignment:
159 ttatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaa 257  Q
    |||||||||||||||||||| |||||| || |||   |||| ||| |||||| |||| |||||||  || |||| | ||||||||||||| ||||| ||     
12255172 ttatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatcat-taatcctcaatttctctctttaaccctaattttccaacttctctaat 12255074  T
258 ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
      || |||||| |||||||| | |||| |||||||| ||| || |||| |  |||||||| |||||||||||||||||||    
12255073 tcaatcctaca-cttgttaattataactatcagaatcatacagattaatagaattgaatgctagtctcacccttacctta 12254995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 13893271 - 13893398
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||||||| || ||||||||||||||||| ||||| |||| | |||||||||||| |||| ||| |||||| || | ||| |||  |||||| ||    
13893271 aatcccatggttctaaccttaaaactgattctaatcatcatcctatgcattatctaaggtatgtacacagtttctacattacttcaacacgtttccacca 13893370  T
210 tctaattctcaattaatcacttttaacc 237  Q
    ||||||  |||| | |||||||| ||||    
13893371 tctaatcatcaaattatcactttcaacc 13893398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 3387452 - 3387518
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| |||||||||||   | ||||| |||||||||||||||||||||||||||||||    
3387452 cttgttaaatttaatcatcagaattacgga-cttaataagattgaatgttagtctcacccttacctta 3387518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 270
Target Start/End: Complemental strand, 9725035 - 9724868
Alignment:
104 tcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaatttt 203  Q
    ||||| |||| |||| ||| || |||||||| ||||| || ||||| |||| ||||||| |||||| |||| ||| |||||  || || || ||| ||||    
9725035 tcatccaatctcatgtttctaaacttaaaaccgattccaatcatcatcctatggattatataaggtatgtacacagtttctccatcaactcaacagtttt 9724936  T
204 ccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaac 270  Q
    | ||||||||||  ||||||  |||||||||| ||||||| || |||||| ||| || ||| ||||||    
9724935 ctatcatctaatcatcaattcctcacttttaaccctaattctcaaattctaaaacctcaacatacaac 9724868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 337
Target Start/End: Original strand, 16057068 - 16057246
Alignment:
159 ttatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaa 257  Q
    |||||||||||||||||||| |||||| || ||||  |||| ||| ||||   |||| || ||||   | |||| | ||||||||||||| ||||| ||     
16057068 ttatctaaggtctgtaaacagtttctacatcaatttaacaacttttcatctattaatcctaaatttcactctttaaccctaattttccaacttctctaat 16057167  T
258 ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    | || |||||| |||| |||||  || ||||||||||||| ||||||| |  |||| | |||||||||||||||||||||    
16057168 ccaatcctaca-cttgctaaatacaatcatcagaattatatagcttaatagaattgtaagttagtctcacccttacctta 16057246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 23461734 - 23461632
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||||||||||| ||||||||  ||   ||||||| ||| | || ||||  |||||||||||||||||||||||||    
23461734 cctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcataga-ctcaagattattgaatgttagtctcacccttacc 23461636  T
335 ttaa 338  Q
    ||||    
23461635 ttaa 23461632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 48274487 - 48274553
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||| | |||||||||||||||||||||||||||||||    
48274487 cttgttaaatttaatcatcagaattacaga-cttgataagattgaatgttagtctcacccttacctta 48274553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 344
Target Start/End: Complemental strand, 9176916 - 9176828
Alignment:
254 aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    |||||||| |||||| |||||||||| |||  |||||||||| | | ||||| || |||||||| |||||||||||||||||||| |||||    
9176916 aaaactaatcctaca-cttgttaaatttaattatcagaattacaga-cttaataaaattgaatgctagtctcacccttaccttaagaaatc 9176828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 342
Target Start/End: Original strand, 15113677 - 15113918
Alignment:
98 gaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattcta- 196  Q
    |||||||||  ||||||||||||| ||| ||||||  ||||||     ||||||||| ||||||||||||||||  ||||| | |||| || ||| |||     
15113677 gaaaattcacttaatcacatggtttaaaccttaaatttgattccggtaatcaccctatggattatctaaggtctaaaaacagtatctacatcaat-ctat 15113775  T
197 caattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    ||| ||| |||||  ||||  ||||||  ||||||| ||||||||| ||||| ||||  ||| ||| | |||| |||||||||| ||| |||||||| ||    
15113776 caacttttcatcaattaatcatcaattcctcacttt-aacctaattctccaacttctttaaattaatcataca-cttgttaaat-taatcatcagaagta 15113872  T
296 taaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
     | | ||||| ||||||||||| ||||||||||||||||||| ||||    
15113873 caga-cttaataagattgaatgctagtctcacccttaccttagcaaa 15113918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 20219591 - 20219517
Alignment:
124 aagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||||||| | |||||| | | |||| |||| |||||| ||||||||||||||||||||||| || |||||||||    
20219591 aagcttaacattgattccagatatcaacctatggattagctaaggtctgtaaacactttctacatcaattctaca 20219517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 1856438 - 1856401
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
1856438 gcttaagaagattgaatgttagtcccacccttacctta 1856401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 13648296 - 13648333
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
13648296 gcttaagaagattgaatgttagtcccacccttacctta 13648333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 13917610 - 13917573
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
13917610 gcttaagaagattgaatgttagtcccacccttacctta 13917573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 19486010 - 19485973
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
19486010 gcttaagaagattgaatgttagtcccacccttacctta 19485973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 27217689 - 27217809
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaa 315  Q
    |||| ||||||||||||||| |||||  | ||||||||||| ||||||||||||| ||||||||| ||   ||||||| | |   |||||||  ||||||    
27217689 tcaaataatcacttttaaccctaattcccaaattctcaaaaactaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaa 27217787  T
316 tgttagtctcacccttacctta 337  Q
    |||||||| |||||||||||||    
27217788 tgttagtcccacccttacctta 27217809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 42374342 - 42374305
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
42374342 gcttaagaagattgaatgttagtcccacccttacctta 42374305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 2279389 - 2279321
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||  ||| |||||||||||| || |||| |  |||||||| |||||||||||||||||||    
2279389 acttgttaaatacaactatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 2279321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 25926337 - 25926301
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctt 336  Q
    |||||||||||||||||||||||| ||||||||||||    
25926337 gcttaagaagattgaatgttagtcccacccttacctt 25926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 16574059 - 16574114
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcacccta 154  Q
    |||||||| | |||| |||||||| || ||||||||||||||||||||||| ||||    
16574059 aaaattcacccaatcccatggttctaaccttaaaactgattctaaacatcaaccta 16574114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 16591603 - 16591548
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcacccta 154  Q
    |||||||| | |||| |||||||| || ||||||||||||||||||||||| ||||    
16591603 aaaattcacccaatcccatggttctaaccttaaaactgattctaaacatcaaccta 16591548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 14980850 - 14980736
Alignment:
157 gattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaa 255  Q
    |||||| ||||||||||| ||| |||| | || ||||| ||| ||||| ||||||||||  ||||||  |||||||||| ||||||| |  ||| || ||    
14980850 gattatataaggtctgtacacagtttcaacatcaattcaacagttttctatcatctaatcatcaattcttcacttttaaccctaattctaaaatcctaaa 14980751  T
256 aactaaacctacaac 270  Q
    |||| ||||||||||    
14980750 aactcaacctacaac 14980736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 15410326 - 15410212
Alignment:
157 gattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaa 255  Q
    |||||| ||||||||||| ||| |||| | || ||||| ||| ||||| ||||||||||  ||||||  |||||||||| ||||||| |  ||| || ||    
15410326 gattatataaggtctgtacacagtttcaacatcaattcaacagttttctatcatctaatcatcaattcttcacttttaaccctaattctaaaatcctaaa 15410227  T
256 aactaaacctacaac 270  Q
    |||| ||||||||||    
15410226 aactcaacctacaac 15410212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 13634929 - 13634892
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagc 127  Q
    ||||||||||||| ||||||||||||||||||| ||||    
13634929 ttttctacgaaaaatcatctaatcacatggttctaagc 13634892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 17180565 - 17180528
Alignment:
301 cttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||| ||||||||||| ||||||||||||||||||||    
17180565 cttaataagattgaatgctagtctcacccttaccttaa 17180528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 32302159 - 32302220
Alignment:
219 caattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaat 279  Q
    ||||| ||||||||||||| |||||  | ||| |||||||||||||||||||| ||||||||    
32302159 caattcatcacttttaaccctaattcccaaatcctcaaaactaaacctacaacatgttaaat 32302220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 9388973 - 9388917
Alignment:
282 aaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||| ||| || |||| |  |||||||| ||||||||||||||||||||    
9388973 aaccatcagaatcatatagattaatagaattgaatgctagtctcacccttaccttaa 9388917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 47832683 - 47832727
Alignment:
293 ttataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||| || |||| || ||||||||||||||||||||||||||||    
47832683 ttatatagattaataaaattgaatgttagtctcacccttacctta 47832727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 87 - 342
Target Start/End: Original strand, 15207641 - 15207892
Alignment:
87 agcttttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctat 186  Q
    |||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| || |||||||||||||||| || ||||||||||     
15207641 agcttttc-acgaaaattcatctaatcacatggatctaagcttaaaactgattctaaacatcaccttatggattatctaaggtctatatacactttctac 15207739  T
187 ataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaacca 286  Q
    || ||||||| || ||||| ||||||||| |||||||  ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||    
15207740 atcaattctaaaaatttccgtcatctaatcctcaattggtcagttttaacctaattt--caattctcaaaactaaacctacaacttgttaaatctaatca 15207837  T
287 tcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
15207838 tcagaattat-aagtttaagaaaattgaatgttagtctcacccttaccttaacaaa 15207892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 99 - 316
Target Start/End: Original strand, 15265897 - 15266111
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||    
15265897 aaaattcatctaatcacatggttctaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtatacactttctacatcaattctaca 15265996  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataa 298  Q
      | ||||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||| |    
15265997 gatatccatcatctaatcctcaattgatcacttttaacctaattt--caattctcaaaactaaacctacaacttgttaaatctaatcatcagaattat-a 15266093  T
299 agcttaagaagattgaat 316  Q
    |||||||||| |||||||    
15266094 agcttaagaaaattgaat 15266111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 91 - 374
Target Start/End: Complemental strand, 23318181 - 23317900
Alignment:
91 tttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataa 190  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||| || |    
23318181 tttctacgaaaattcacctaatcacatggttcaaagcttaaaactgattctaaacatcatcctatggattatctaaggtatgtaaacactttctacatca 23318082  T
191 attctacaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatca 289  Q
    ||||  ||||| | |||||||| || |   ||| || ||| |||| ||||||||||||||||| ||||   ||||||| || ||||||||||||||||||    
23318081 attcagcaattctacatcatct-atccatcatttatgactcttaaccctaattttccaattcttaaaaactaacctac-acatgttaaatctaaccatca 23317984  T
290 gaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttct 374  Q
     | ||||  |||||||||  ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
23317983 aatttat-cagcttaagagaattgaatgttagtctcacccttaccttaacaaatcgaaatcggaagcctctcttggttctcttct 23317900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 95 - 338
Target Start/End: Original strand, 9578356 - 9578598
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| |||| || |||||||||| |||||||||||| |||||||||||||||||| | ||||||||||||||||| |||||||||| || |||||    
9578356 tacgaaaatccatcaaaacacatggttctaagcttaaaactaattctaaacatcaccctatgaattatctaaggtctgtacacactttctacatcaattc 9578455  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||||||||||||||| ||||||| |||||| | ||||  | |||||||||||  |||||||| |||||||| |||||||||||| |||||||||    
9578456 tacaagtttccatcatctaatcctcaatt-atcactctaaaccctaatttccaattctaaaaaactaaccctacaacatgttaaatctaatcatcagaat 9578554  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
     || | |||||||||||||||||||||||| ||||||||||||||    
9578555 cat-aggcttaagaagattgaatgttagtcccacccttaccttaa 9578598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 96 - 277
Target Start/End: Original strand, 15246773 - 15246952
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||    
15246773 acgaaaattcatctaatcacatggatctaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtatacactttctacatcaattct 15246872  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaa 277  Q
    |||| ||||||||||||||| |||||||  |   ||||||||||||||  ||||||||||||||||||||||||||||||||    
15246873 acaaatttccatcatctaatcctcaattggtttgttttaacctaattt--caattctcaaaactaaacctacaacttgttaa 15246952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 108 - 338
Target Start/End: Original strand, 13919595 - 13919821
Alignment:
108 ctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccat 207  Q
    |||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||| | |||    
13919595 ctaatctcatgattcaaagcttaaaattgattctaaacatcaccctatggattatctaaggtctgtaaacactttctacatcaattctacaattctacat 13919694  T
208 catctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaaga 307  Q
    |||||||   | ||||  ||||| ||||||  | |||||||   |||||||| ||||||| || |||||||||||| ||||||||||||  |||||||||    
13919695 catctaaccattaatt-ctcactcttaaccctaatttccaacgttcaaaact-aacctac-acatgttaaatctaatcatcagaattat-cagcttaaga 13919790  T
308 agattgaatgttagtctcacccttaccttaa 338  Q
      |||||||||||||||||||||||||||||    
13919791 gaattgaatgttagtctcacccttaccttaa 13919821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 99 - 338
Target Start/End: Original strand, 11202036 - 11202274
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||||||| | |||| |||||||| || |||||||||||||| ||  |||| |||| ||||||||||||||||||| ||| |||||| || |||   |||    
11202036 aaaattcaccaaatcccatggttctaaccttaaaactgattccaattatcatcctatggattatctaaggtctgtacacattttctacatcaatctaaca 11202135  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataa 298  Q
     |||| |||||||||||  ||||||  ||||||||||||||||| | |||||| |||||||| ||||  ||| ||||||||||||  |||||||| |||     
11202136 ctttttcatcatctaatcatcaattcctcacttttaacctaattcttcaattcccaaaactacacctctaacatgttaaatctaattatcagaatcatag 11202235  T
299 agcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    | ||||||||||||||||| ||||||||||||||||||||    
11202236 a-cttaagaagattgaatgctagtctcacccttaccttaa 11202274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 342
Target Start/End: Complemental strand, 32402411 - 32402177
Alignment:
108 ctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccat 207  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||||||||| | |||||||| || |||||  || || | |||    
32402411 ctaatcacatggttctaagcttaaagctgattctaaacatcaccctatgaattatctaaggtctgtatatactttctacatcaattcagcagttatacat 32402312  T
208 catctaattctcaattaatcacttttaa-cctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaa 305  Q
    |||||||   |||||| |||||| |||| |||||||    ||| ||| |||||||||||||| || |||||||||||| |||||||||||  ||||||||    
32402311 catctaaccatcaatt-atcactcttaagcctaattccaaaatcctcaaaaactaaacctacgacatgttaaatctaatcatcagaatta-caagcttaa 32402214  T
306 gaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    ||  |||||||||||||| ||||||||||||| ||||    
32402213 gagaattgaatgttagtcccacccttaccttagcaaa 32402177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 96 - 275
Target Start/End: Original strand, 37428426 - 37428606
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| ||  |||||||||||||| || |||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||||||| || |||       
37428426 acgaaaatgcacataatcacatggttctaaccttaaaactgattctaaaaatcaccctatggattgtctaaggtctgtacacactttctacatcaatcta 37428525  T
196 acaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctc-aaaactaaacctacaacttgtt 275  Q
    ||| ||||||||||||||||  |||||| |||||| |||| ||||||| || ||||||| ||||||||||||||||| ||||    
37428526 acagttttccatcatctaatcgtcaatt-atcactcttaaccctaattctcaaattctcaaaaactaaacctacaacatgtt 37428606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 156 - 338
Target Start/End: Original strand, 324951 - 325131
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaa 255  Q
    ||||||||||||||||||||| | |||||| || |||   |||| ||| |||||  ||||  ||||||  ||||||| ||||||||| ||||||||||||    
324951 ggattatctaaggtctgtaaatagtttctacatcaatctaacaacttttcatcaattaatcatcaattcttcacttt-aacctaattctccaattctcaa 325049  T
256 aactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||| |||| ||||||||||||  |||||||| || | |||||||||||||||||| ||||| ||||||||||||||    
325050 aactaaacctccaacatgttaaatctaattatcagaatcat-aggcttaagaagattgaatgctagtcccacccttaccttaa 325131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 338
Target Start/End: Original strand, 319973 - 320210
Alignment:
98 gaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctac 197  Q
    |||||| || ||||||||||| || ||| ||||||||||||||  |  |||| |||| ||||||||||||||||||  |||||||||| || ||||   |    
319973 gaaaatccacctaatcacatgatttaaaccttaaaactgattcctataatcatcctatggattatctaaggtctgtccacactttctacatcaatttagc 320072  T
198 aattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattat 296  Q
    |||| | |||||||||    |||||| || ||| |||| ||||||||||||||||| |||||| ||||||| || ||||| |||||||||||| ||||||    
320073 aattctacatcatctatccatcaatt-atgactcttaaccctaattttccaattcttaaaact-aacctac-acatgttatatctaaccatcaaaattat 320169  T
297 aaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
      |||||||||  |||||||||||||||||||||||||||||    
320170 -cagcttaagagaattgaatgttagtctcacccttaccttaa 320210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 337
Target Start/End: Original strand, 44495482 - 44495588
Alignment:
230 ttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcaccc 329  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||||||  |||| ||| ||| | ||||||||||||||||||||||| |||||    
44495482 ttttaacctaattctccaattctcaaaactaaacctccaatatgttaaatctaattatcataatcataga-cttaagaagattgaatgttagtcccaccc 44495580  T
330 ttacctta 337  Q
    ||||||||    
44495581 ttacctta 44495588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 43927952 - 43928058
Alignment:
231 tttaacctaattttccaattctcaa-aactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcaccc 329  Q
    |||||||||||| || ||||||||| |||||| |||||||||||||||||  |||||||||||||| | | ||||| ||||||||||| |||||||||||    
43927952 tttaacctaattctcaaattctcaataactaatcctacaacttgttaaatacaaccatcagaattacaga-cttaataagattgaatgctagtctcaccc 43928050  T
330 ttacctta 337  Q
    ||||||||    
43928051 ttacctta 43928058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 14604734 - 14604857
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaa 255  Q
    ||||||||||||||||||| ||| |||||| || |||   ||| |||||||||||||||| ||||||| |||||||||||||  | || | |||||||||    
14604734 ggattatctaaggtctgtacacagtttctacatcaatctaacagttttccatcatctaatcctcaattcatcacttttaaccctaattccaaattctcaa 14604833  T
256 aactaaacctacaacttgttaaat 279  Q
    ||||||| |||||||  |||||||    
14604834 aactaaagctacaacaagttaaat 14604857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 338
Target Start/End: Original strand, 21838186 - 21838426
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| |||||||||||||||||| |||||||| | |||     |||| |||| ||||||||||||||||||| ||| |||||| || |||       
21838186 acgaaaattcacctaatcacatggttcaaaccttaaaaccggttcctttaatcatcctatggattatctaaggtctgtacacagtttctaaatcaatcta 21838285  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||||| | |||||  ||||  ||||||  |||| |||||||||||| ||||| |||| |||| |||  |||| ||||||||||| ||| ||||||||||    
21838286 acaattctacatcaattaatcgtcaattcctcac-tttaacctaattctccaactctctaaaattaattctac-acttgttaaatttaatcatcagaatt 21838383  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    | | | || || |  |||||||| ||||||||||||||||||||    
21838384 acaga-ctcaatataattgaatgctagtctcacccttaccttaa 21838426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 337
Target Start/End: Complemental strand, 37250507 - 37250317
Alignment:
146 atcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttc 245  Q
    |||| |||| ||||||||||||||||||||| | |||||| || |||   |||| ||| |||||  |||| |||||||  ||||||| | |||||||| |    
37250507 atcatcctatggattatctaaggtctgtaaatagtttctacatcaatctaacaacttttcatcaattaatcctcaatttctcactttaaccctaatttcc 37250408  T
246 caattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     | ||||| ||| ||| | |||| ||||||||||  ||||||||||||||||   ||||| |  ||||||||||||||||||||||||||||    
37250407 aacttctctaaattaatcataca-cttgttaaatacaaccatcagaattatactacttaatagaattgaatgttagtctcacccttacctta 37250317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 1464874 - 1464785
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttcta 185  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||     ||||||||| ||||||||||||||||||||||| ||||||    
1464874 acgaaaattcatctaatcacttggtttaaaccttaaaactgattcctgtaatcaccctatggattatctaaggtctgtaaacagtttcta 1464785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 341
Target Start/End: Original strand, 50243773 - 50243867
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    |||||||||||| |||||||| |||| ||||||||||||  || ||||| | |  ||||||||||||||||||||||||||||||||||||||||||    
50243773 ccaattctcaaa-ctaaacctccaacatgttaaatctaattatgagaatcacag-gcttaagaagattgaatgttagtctcacccttaccttaacaa 50243867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 14568794 - 14568727
Alignment:
142 aaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||| || ||||||    
14568794 aaacatcaccctatggattatctaaggtctgtacacactttctacatcaattctacaagttcccatca 14568727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 338
Target Start/End: Original strand, 12386199 - 12386382
Alignment:
146 atcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttc 245  Q
    |||| |||| |||||||||||||||||||||||||||||| || ||||||| |        |||  ||||  ||||||  ||||||| ||||||||| ||    
12386199 atcaacctatggattatctaaggtctgtaaacactttctacatcaattctata--------tcaattaatcatcaatttctcacttt-aacctaattctc 12386289  T
246 caattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
     ||||||||||| |||| |||||||| ||||||||  |||||||| ||| ||| | ||||| |  |||||||| ||||| ||||||||||||||    
12386290 aaattctcaaaaactaatcctacaacgtgttaaatacaaccatcaaaatcataga-cttaatagaattgaatgctagtcccacccttaccttaa 12386382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 21619386 - 21619452
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||||    
21619386 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctta 21619452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 24152463 - 24152385
Alignment:
259 taaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||||| |||| ||||||||||||  |||||||| |||  ||||| |||||||||||||||||| ||||||||||||||    
24152463 taaacctccaacatgttaaatctaattatcagaatcatag-gcttaggaagattgaatgttagtcccacccttaccttaa 24152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 341
Target Start/End: Original strand, 36167535 - 36167605
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    |||||||||| ||| |||||| |||| | | ||||| |||||||||||||||||||||||||||||||||||    
36167535 cttgttaaatttaatcatcaggattacaga-cttaataagattgaatgttagtctcacccttaccttaacaa 36167605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 253
Target Start/End: Complemental strand, 16828508 - 16828364
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||||||| || ||||||||||||||||| ||||| |||| | |||||||||||| |||| | | || ||| || ||||| |||  ||| || ||    
16828508 aatctcatggttctaaccttaaaactgattctaatcatcatcctatgcattatctaaggtttgtacatagttactacattaattcaacacgttttcacca 16828409  T
210 tctaattctcaattaatcacttttaa-cctaattttccaattctc 253  Q
    ||||||  |||| | ||||||||||| ||||||| || |||||||    
16828408 tctaatcatcaaattatcacttttaaccctaattctcaaattctc 16828364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 22791973 - 22792214
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| |||||| | ||||| ||| || |||||||||||     |||| |||| |||||||||||||||||||| ||||||||| || ||||      
22791973 acgaaaattcacctaatctcttggtttaaatctcaaaactgattcctgtaatcatcctatggattatctaaggtctgtaaccactttctacatcaattta 22792072  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    || ||| | |||||  |  |   |||||  |||| ||||||||||||||| || ||||| ||| | || |||||  |||| |||||  ||||||||||||    
22792073 accattattcatcaatttctcaccaattcttcac-tttaacctaattttcaaacttctctaaatccaaccctac-tcttgctaaatacaaccatcagaat 22792170  T
294 tataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     ||| || |||| || |||||||| |||||||||||||||||||    
22792171 catatagattaataaaattgaatgctagtctcacccttacctta 22792214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 341
Target Start/End: Complemental strand, 52523107 - 52522925
Alignment:
159 ttatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaa 257  Q
    ||||||| |||||||||||| |||||| || |||   |||| ||| ||||   ||||||||||||  || |||| | ||||||||||||| ||||| ||     
52523107 ttatctacggtctgtaaacagtttctacatcaatctaacaacttttcatccattaattctcaatttctctctttaaccctaattttccaacttctctaat 52523008  T
258 ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
      || | |||| |||||||| | |||| |||||||| ||| || |||| |  |||||||| |||||||||||||||||||||||    
52523007 tcaatcataca-cttgttaattataactatcagaatcatacagattaatataattgaatgatagtctcacccttaccttaacaa 52522925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 5224337 - 5224375
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||| ||||||||||||||    
5224337 gcttaagaagattgaatgttagtcccacccttaccttaa 5224375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 16644975 - 16645013
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||| ||||||||||||||    
16644975 gcttaagaagattgaatgttagtcccacccttaccttaa 16645013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 22758953 - 22758835
Alignment:
219 caattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatg 317  Q
    ||||| ||||||||||||| |||||  | ||| |||||||||||||||||||| ||||||||  ||   ||||||||| ||  ||||  |  |||||| |    
22758953 caatttatcacttttaaccctaattcccaaatcctcaaaactaaacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaagg 22758854  T
318 ttagtctcacccttacctt 336  Q
    |||||||||||||||||||    
22758853 ttagtctcacccttacctt 22758835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Complemental strand, 26054472 - 26054434
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||||||| |||||||||||||||||||||||||||||    
26054472 gcttaagaatattgaatgttagtctcacccttaccttaa 26054434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 22146805 - 22146768
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
22146805 gcttaagaagattgaatgttagtcccacccttacctta 22146768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 37641541 - 37641504
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
37641541 gcttaagaagattgaatgttagtcccacccttacctta 37641504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 52465408 - 52465371
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
52465408 gcttaagaagattgaatgttagtcacacccttacctta 52465371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 1464701 - 1464633
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||| ||||||||||||| |||  | |||| || ||||| || |||||||||||||||||||    
1464701 acttgttaaatttaaccatcagaatcataccgattaataaaattgattgctagtctcacccttacctta 1464633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 19039485 - 19039552
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||||||| ||||||||||| | | ||||| |  |||||||| |||||||||||||||||||    
19039485 acttgttaaatctaatcatcagaattacaga-cttaatagaattgaatgctagtctcacccttacctta 19039552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 45219477 - 45219411
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||| ||| ||||||||||| | | ||||| ||||||||||| ||||||||||||||||||||    
45219477 cttgttaaat-taatcatcagaattacaga-cttaataagattgaatgctagtctcacccttaccttaa 45219411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 337
Target Start/End: Complemental strand, 2045034 - 2044856
Alignment:
159 ttatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaa 257  Q
    |||| ||||||||||||||| |||||| || |||   |||| ||| ||||   |||| |||||||  || |||| | ||||||||||||| ||||| ||     
2045034 ttatttaaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctctttaaccctaattttccaacttctctaat 2044935  T
258 ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
      || |||||| |||| |||||  || ||||||||| ||| || |||| |  ||||||||||||||||||||||||||||    
2044934 tcaatcctaca-cttgctaaatacaatcatcagaatcatataggttaatagaattgaatgttagtctcacccttacctta 2044856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 337
Target Start/End: Complemental strand, 2047763 - 2047585
Alignment:
159 ttatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaa 257  Q
    |||| ||||||||||||||| |||||| || |||   |||| ||| ||||   |||| |||||||  || |||| | ||||||||||||| ||||| ||     
2047763 ttatttaaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctctttaaccctaattttccaacttctctaat 2047664  T
258 ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
      || |||||| |||| |||||  || ||||||||| ||| || |||| |  ||||||||||||||||||||||||||||    
2047663 tcaatcctaca-cttgctaaatacaatcatcagaatcatataggttaatagaattgaatgttagtctcacccttacctta 2047585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 30205847 - 30205772
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgta 174  Q
    |||||||| | |||| ||| |||| || ||||||||||||||||||||||| |||| | ||  |||||||||||||    
30205847 aaaattcacccaatctcattgttctaaccttaaaactgattctaaacatcaacctatgaatcttctaaggtctgta 30205772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 346
Target Start/End: Complemental strand, 55318725 - 55318615
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| |||||| |||||| ||||||||  ||   ||||||| ||| | || ||||  |||||||||||||| ||||||||||    
55318725 cctaattctcaaattctcaaaaactaaacttacaacatgttaaatacaattttcagaatcataga-ctcaagattattgaatgttagtcccacccttacc 55318627  T
335 ttaacaaatcaa 346  Q
    |||| |||||||    
55318626 ttaagaaatcaa 55318615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 337
Target Start/End: Original strand, 23275492 - 23275616
Alignment:
212 taattctcaattaatcacttttaacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaaga 310  Q
    |||| ||||||| |||||||| | ||||||| ||||| ||||| ||   || |||||| |||||||||| ||| ||||||||||| | | ||||| |  |    
23275492 taatcctcaatttatcactttaaccctaattctccaacttctctaattcaatcctaca-cttgttaaatttaatcatcagaattacaga-cttaatagaa 23275589  T
311 ttgaatgttagtctcacccttacctta 337  Q
    ||||||| |||||||||||||||||||    
23275590 ttgaatgctagtctcacccttacctta 23275616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 337
Target Start/End: Complemental strand, 45577776 - 45577655
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||| ||||||||||||||| |||||  | ||||||||||| ||||| |||||||| ||||||||| ||   ||||||| |   | |||||||  |||||    
45577776 tcaaataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatta-cttaagattattga 45577678  T
315 atgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||    
45577677 atgttagtctcacccttacctta 45577655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 55477319 - 55477440
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||| ||||||||||||||| |||||  | ||||||||||| ||||| |||||||| ||||||||| ||   ||||||| |   | |||||||  |||||    
55477319 tcaaataatcacttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatga-cttaagattattga 55477417  T
315 atgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||    
55477418 atgttagtctcacccttacctta 55477440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 326624 - 326587
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagc 127  Q
    ||||||||||||| ||||||||||||||||||| ||||    
326624 ttttctacgaaaaatcatctaatcacatggttctaagc 326587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 13522239 - 13522202
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||| ||||| |||||||||||||    
13522239 gcttaagaagattgaatgctagtcccacccttacctta 13522202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 43549696 - 43549659
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||| ||||||    
43549696 gcttaagaagattgaatgttagtcccaccctaacctta 43549659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 43888874 - 43888813
Alignment:
219 caattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaat 279  Q
    ||||| ||||||||||||| |||||  | ||| |||||||||||||||||||| ||||||||    
43888874 caatttatcacttttaaccctaattcccaaatcctcaaaactaaacctacaacatgttaaat 43888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 96 - 374
Target Start/End: Original strand, 4350 - 4628
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||  || ||||||    
4350 acgaaaattcacctaatcacatggttcaaagcttaaaactgattataaacatcacccaatggattatctaaggtctgtaaacactttctgcatcaattct 4449  T
196 acaattttccatcatctaattctcaattaatcacttttaac-ctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||| ||||||||||| |||||||  ||||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
4450 acaagttttcatcatctaatcctcaatt-ctcactcttaacactaa-tttccaattctcaaaacaaaacctacaacttgttaaatctaatcatcagaatt 4547  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa--caaatcaaaaccggaagcctctcttggttctcttct 374  Q
    || ||||||||||| ||||||||||||||| |||||||||||||   ||||| ||| ||| |||||||||||||||| ||||    
4548 at-aagcttaagaaaattgaatgttagtctgacccttaccttaatcaaaatcgaaatcggcagcctctcttggttcttttct 4628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 95 - 338
Target Start/End: Complemental strand, 28936 - 28695
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||||||||||||  || |||||||||||||| |||| |||||||||| || |||||    
28936 tacgaaaatccatcaaaacacatggttctaagcttaaaactgattctaaacatcactttatggattatctaaggtttgtacacactttctacatcaattc 28837  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||  | |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
28836 tacaagtttccatcatctaatcctcaatt-atcactcttaaccctaatttccaattctcaaaactaaacctacaacttgttaaatctaatcatcagaatt 28738  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    | || |||||||||||||||||||||||| ||||||||||||||    
28737 a-aaggcttaagaagattgaatgttagtcccacccttaccttaa 28695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 96 - 338
Target Start/End: Complemental strand, 37522 - 37282
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||| || ||||||    
37522 acgaaaatgcatctaatcacatggttctaagcttaaaactgattctaaacatcactctatggattatctaatgtctgtatacactttctacatcaattct 37423  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||||||| | || |||||||||||||| || |||||||||||| |||||||||     
37422 acaagtttccatcatctaatcctcaattaatcacttttaacctaa-tttccaactttcaaaaactaaacctac-acatgttaaatctaatcatcagaatc 37325  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    || | |||||||||||||||||||||||||||||||||||||||    
37324 at-aggcttaagaagattgaatgttagtctcacccttaccttaa 37282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 5e-78; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 90 - 348
Target Start/End: Complemental strand, 26740043 - 26739786
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatata 189  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||     
26740043 ttttctacgaaaattcacctaatcacatggttcaaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtatacactttctacatc 26739944  T
190 aattctacaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatc 288  Q
     ||||  ||||| | |||||||||    ||||||  ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
26739943 cattcagcaattatacatcatctatccatcaatt-ctcactcttaaccctaattttccaattctcaaaactaaacctacaacttgttaaatttaatcatc 26739845  T
289 agaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaa 348  Q
    ||||||| | | |||||||  |||||||||||||||||||||||||||||||||||||||    
26739844 agaattacaga-cttaagagaattgaatgttagtctcacccttaccttaacaaatcaaaa 26739786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 96 - 374
Target Start/End: Original strand, 20572577 - 20572849
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| || | |||||||||||  |||| ||||||||| ||| ||||||    
20572577 acgaaaattcatctaatcacatggttctaagcttaaaactgattctaaa-atcaccttatgaattatctaagg--tgtacacactttctgtatcaattct 20572673  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    |||| ||| ||||||||||| ||||||| |||||||||||||||| ||||||| | |||||||||||||||| || |||||||||||| ||||||||| |    
20572674 acaaattttcatcatctaatcctcaattgatcacttttaacctaa-tttccaactttcaaaactaaacctac-acatgttaaatctaatcatcagaatca 20572771  T
296 taaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttct 374  Q
    | | |||||  || ||||||||||||||||||||||||||||| ||||  ||| ||| |||||||||||||||||||||    
20572772 t-aggcttaccaaaattgaatgttagtctcacccttaccttaagaaattgaaatcggcagcctctcttggttctcttct 20572849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 90 - 332
Target Start/End: Complemental strand, 26732230 - 26731989
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatata 189  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||     
26732230 ttttctattaaaattcacctaatcacatggttcaaagcttaaaactgattttaaacatcaccctatggattatctaaggtctgtatacactttctacatc 26732131  T
190 aattctacaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatc 288  Q
     ||||  ||||||| |||||||||    ||||||  ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
26732130 tattcagcaattttacatcatctatccatcaatt-ctcactcttaaccctaattttccaattctcaaaactaaacctacaacttgttaaatttaatcatc 26732032  T
289 agaattataaagcttaagaagattgaatgttagtctcaccctta 332  Q
    ||||||| | | |||||||  |||||||||||||||||||||||    
26732031 agaattacaga-cttaagagaattgaatgttagtctcaccctta 26731989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 96 - 333
Target Start/End: Complemental strand, 25573817 - 25573581
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || |||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||    
25573817 acgaaaatgcacctaaacacatggttctaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtacacactttctacatcaattct 25573718  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||||||||||||||| ||||| | |||||| ||| ||  | |||||||||||| |||||||| |||||||| |||||||||||| |||||||||     
25573717 acaagtttccatcatctaatcctcaa-tgatcactcttagccctaatttccaattctcaaaaactaaccctacaacatgttaaatctaatcatcagaatc 25573619  T
295 ataaagcttaagaagattgaatgttagtctcacccttac 333  Q
    || | | |||||||||||||||||||||| |||||||||    
25573618 at-aggattaagaagattgaatgttagtcccacccttac 25573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 23470503 - 23470744
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| | ||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||| |||| |||||||||| || ||||||    
23470503 acgaaaatgcatcaattcacatggttctaagcttaaaactgattctaaacgtgaccctatggattatctaaggtttgtacacactttctacattaattct 23470602  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc--aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||  | ||||||||||||  |||||||| |||||||| |||||||||||| |||||||||    
23470603 acaagtttccatcatctaatcctcaatt-atcactcttaaccctaatttccaattctccaaaaactaaccctacaacatgttaaatctaatcatcagaat 23470701  T
294 tataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     || | ||||||||||||||||||||| || |||||||||||||    
23470702 cat-aggcttaagaagattgaatgttattcccacccttacctta 23470744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 97 - 332
Target Start/End: Complemental strand, 25576244 - 25576010
Alignment:
97 cgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattcta 196  Q
    ||||||| || |||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||    
25576244 cgaaaatgcacctaaacacatggttctaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtacacactttctacatcaattcta 25576145  T
197 caattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    ||| ||||||||||||||| ||||| | |||||| ||| ||  | |||||||||||| |||||||| |||||||| |||||||||||  ||||||||| |    
25576144 caagtttccatcatctaatcctcaa-tgatcactcttagccctaatttccaattctcaaaaactaaccctacaacatgttaaatctattcatcagaatca 25576046  T
296 taaagcttaagaagattgaatgttagtctcaccctta 332  Q
    | | |||||||||||||||||||||||| ||||||||    
25576045 t-aggcttaagaagattgaatgttagtcccaccctta 25576010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 97 - 332
Target Start/End: Complemental strand, 25575051 - 25574817
Alignment:
97 cgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattcta 196  Q
    ||||||| || |||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||    
25575051 cgaaaatgcacctaaacacatggttctaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtacacactttctacatcaattcta 25574952  T
197 caattttccatcatctaattctcaattaatcacttttaac-ctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    ||| ||||||||||||||| ||||| | |||||| ||| | |||| |||||||||||| |||||||| |||||||| |||||||||||  ||||||||      
25574951 caagtttccatcatctaatcctcaa-tgatcactcttagctctaa-tttccaattctcaaaaactaaccctacaacatgttaaatctattcatcagaacc 25574854  T
295 ataaagcttaagaagattgaatgttagtctcaccctta 332  Q
    || | |||||||||||||||||||||||| ||||||||    
25574853 at-aggcttaagaagattgaatgttagtcccaccctta 25574817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 95 - 344
Target Start/End: Complemental strand, 21327653 - 21327416
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| || |||||    
21327653 tacgaaaatccacctaatcacatggttcaaagcttaaaactgattctaaacatcaccctatggattatctaaggtctggacacactttctacatcaattc 21327554  T
195 tacaattttccatcatctaattctcaattaatcacttttaac-ctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||| |||||| ||||| | |||||           ||||  |||||||||| |||||||||    
21327553 tacaagtttccatcatctaatcctcaatt-atcactcttaactctaattctccaactttcaaa-----------aactaattaaatctaatcatcagaat 21327466  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    |||| | |||||||| |||||||||||||||||| ||||||||||||||||    
21327465 tataga-cttaagaaaattgaatgttagtctcactcttaccttaacaaatc 21327416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 23476214 - 23476456
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| | ||||||||||  |||||||||||||||| ||||  |||||||| ||||||||||||||||||| ||||||  || || ||||||    
23476214 acgaaaatgcatcaattcacatggttataagcttaaaactgattataaatgtcaccctatggattatctaaggtctgtacacacttcatacatcaattct 23476313  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc---aaaactaaacctacaacttgttaaatctaaccatcagaa 292  Q
    |||| |||||| |||||||| ||||||| |||||| ||||||  | |||| |||||||   |||||||| |||||||| |||||||||||| ||| ||||    
23476314 acaagtttccagcatctaatcctcaatt-atcactcttaaccctaatttcaaattctccaaaaaactaaccctacaacatgttaaatctaatcattagaa 23476412  T
293 ttataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    | || | |||||||||||||||||||||||| |||||||||||||    
23476413 tcat-aggcttaagaagattgaatgttagtcccacccttacctta 23476456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 7763122 - 7763030
Alignment:
2 aaagcatttcatctttcatttcaacaatcgatgaatccgataaaaacccatcaacgtacttggttgctaggtcgtgaatgtaagtagcttttc 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||    
7763122 aaagcatttcatcgtccatttcaacaatcgatgaatccgataaaaacccatcagcgtacttggttgctaggtcgtgaatgtaggttgcttttc 7763030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 190 - 337
Target Start/End: Original strand, 31062149 - 31062293
Alignment:
190 aattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatca 289  Q
    ||||| |||| |||||||||||||||  ||||||  ||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||  ||||    
31062149 aattcaacaagtttccatcatctaatcatcaattcctcacttttaacctaattcttcaattctcaaaactaaatctccaacatgttaaatctaattatca 31062248  T
290 gaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||| || | |||||||||||||||||||||  |||||||||||||||    
31062249 gaatcat-aggcttaagaagattgaatgtta--ctcacccttacctta 31062293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 146 - 374
Target Start/End: Complemental strand, 22177536 - 22177310
Alignment:
146 atcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttc 245  Q
    |||| |||| ||||||||||||||||||||||| |||||| || |||   |||||| | |||||  ||||  ||||||  ||||||| |||||||||| |    
22177536 atcatcctatggattatctaaggtctgtaaacagtttctacatcaatctaacaattctacatcaattaatcatcaatttctcactttaaacctaatttcc 22177437  T
246 caattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaac-aaatc 344  Q
     | ||||| ||| ||| |||||| |||||||||| ||| ||||||||||| | | ||||| ||||||||||| ||||||||||||||||||||| |||||    
22177436 aacttctctaaattaatcctaca-cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgctagtctcacccttaccttaacaaaatc 22177339  T
345 aaaaccggaagcctctcttggttctcttct 374  Q
     ||| | | ||||||||||||| |||||||    
22177338 gaaatc-gcagcctctcttggtcctcttct 22177310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 27988344 - 27988105
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| ||||||||||||||  |||||||| | |||||| | |  ||| |||| |||||||||| |||||||| ||| |||||| || |||       
27988344 acgaaaattcacctaatcacatggttttaagcttaacattgattccagaattcatcctatggattatctagggtctgtacacagtttctacatcaatcta 27988245  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    || ||||| || | | ||||  ||||||   |||||| | |||||||| ||| ||||| ||| ||| |||||| |||||||||| |||||||||||||||    
27988244 actatttttcaccgtttaatcatcaattctacactttaaccctaatttcccacttctctaaattaatcctaca-cttgttaaatttaaccatcagaatta 27988146  T
296 taaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     | | ||||| |  ||||||||||||||||||||||||||||    
27988145 caga-cttaatagaattgaatgttagtctcacccttacctta 27988105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 341
Target Start/End: Original strand, 22413047 - 22413141
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    |||||||||||| |||||||| |||| ||||||||||||  |||||||| |||  |||||| ||||||||||||||||| |||||||||||||||||    
22413047 ccaattctcaaa-ctaaacctccaacatgttaaatctaattatcagaatcatag-gcttaaaaagattgaatgttagtcccacccttaccttaacaa 22413141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 230 - 337
Target Start/End: Complemental strand, 41094925 - 41094818
Alignment:
230 ttttaacctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacc 328  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||||||||  ||  |||||||||| |  ||||||||  ||||| |||||||||||||    
41094925 ttttaacctaattctccaattctcaaaaactaaacctacaacatgttaaatacaattatcagaattacag-gcttaagagaattgattgttagtctcacc 41094827  T
329 cttacctta 337  Q
    |||||||||    
41094826 cttacctta 41094818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 21740986 - 21740897
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttcta 185  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||     ||||||||| |||||| |||||||||||||||| ||||||    
21740986 acgaaaattcatctaatcacttggtttaaaccttaaaactgattcctgtaatcaccctatggattacctaaggtctgtaaacagtttcta 21740897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 14048929 - 14049040
Alignment:
226 tcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtct 324  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||  ||  ||||||||||  | ||||||||  ||||| ||||| ||     
14048929 tcacttttaacctaattctccaattttcaaaaactaaacctacaacatgttaaatacaattatcagaatta-caggcttaagagaattgattgttaatcc 14049027  T
325 cacccttacctta 337  Q
    |||||||||||||    
14049028 cacccttacctta 14049040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 18318250 - 18318184
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||||    
18318250 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctta 18318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 21344480 - 21344442
Alignment:
310 attgaatgttagtctcacccttaccttaacaaatcaaaa 348  Q
    |||||||||||||||||||||||||||||||||||||||    
21344480 attgaatgttagtctcacccttaccttaacaaatcaaaa 21344442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 24473815 - 24473923
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||||||||||| ||||||||  ||   ||||||| ||| | || ||||  |||||||||||||||||||||||||    
24473815 cctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcataga-ctcaagattattgaatgttagtctcacccttacc 24473913  T
335 ttaacaaatc 344  Q
    |||| |||||    
24473914 ttaagaaatc 24473923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 20765296 - 20765230
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||||| |||||||||| ||||||||||||||||||||    
20765296 cttgttaaatttaatcatcagaattacaga-cttaataagattgaattttagtctcacccttacctta 20765230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 337
Target Start/End: Complemental strand, 41860682 - 41860581
Alignment:
236 cctaattttccaattctcaaaa-cta-aacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttac 333  Q
    ||||||| || ||||||||||| ||| |||||||||| | ||||||||||  |||| ||| |||  |||||||||||||||||||||||| |||||||||    
41860682 cctaattctcaaattctcaaaaactataacctacaacat-ttaaatctaattatcaaaatcatag-gcttaagaagattgaatgttagtcccacccttac 41860585  T
334 ctta 337  Q
    ||||    
41860584 ctta 41860581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 38620263 - 38620384
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||| ||||||||||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||| ||   ||||||| |   | |||||||  |||||    
38620263 tcaaataatcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatga-cttaagattattga 38620361  T
315 atgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||    
38620362 atgttagtctcacccttacctta 38620384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Complemental strand, 40723497 - 40723459
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||| ||||||||||||||    
40723497 gcttaagaagattgaatgttagtcccacccttaccttaa 40723459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 40726695 - 40726732
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
40726695 gcttaagaagattgaatgttagtcccacccttacctta 40726732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 24068257 - 24068325
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||  || ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
24068257 acttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 24068325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 25744601 - 25744673
Alignment:
226 tcacttttaacctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattata 297  Q
    |||||||||||||||||  | | ||||||||| || | | ||||||||||||||||||| |||||||||||||    
25744601 tcacttttaacctaattcccaatttctcaaaaactcatcatacaacttgttaaatctaatcatcagaattata 25744673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 337
Target Start/End: Original strand, 36315396 - 36315496
Alignment:
236 cctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||| ||||| || |||||| |||||||||| ||| ||||||||||| | | ||||| |  |||||||| ||||||||||||||||    
36315396 cctaattctcaaattctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacaga-cttaatagaattgaatgctagtctcacccttacc 36315493  T
335 tta 337  Q
    |||    
36315494 tta 36315496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 18419466 - 18419503
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||| ||||||||    
18419466 gcttaagaagattgaatgttagtcccacctttacctta 18419503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 32028766 - 32028866
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||| ||||||| ||||||||  ||   ||||||| ||||| || ||||  ||||||||||||||||| |||||||    
32028766 cctaattctcaaattctcaaaaactaaaactacaacatgttaaatacaattttcagaatcataaa-ctcaagattattgaatgttagtctcatccttacc 32028864  T
335 tt 336  Q
    ||    
32028865 tt 32028866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 264018 - 263982
Alignment:
301 cttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||  ||||||||||||||||||||||||||||    
264018 cttaagattattgaatgttagtctcacccttacctta 263982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 15797311 - 15797394
Alignment:
254 aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||  |||||||| ||||||||  ||| |||||||||| |  ||||||||| ||||| || ||||| ||||||||||||||    
15797311 aaaactagtcctacaacatgttaaatacaactatcagaattagag-gcttaagaaaattgagtgctagtcccacccttaccttaa 15797394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 26011304 - 26011236
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||| | |||| |||||||| ||| || |||| |  |||||||| |||||||||||||||||||    
26011304 acttgttaattataactatcagaatcatacagattaatagaattgaatgctagtctcacccttacctta 26011236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 96 - 342
Target Start/End: Original strand, 9612 - 9858
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| || ||||||    
9612 acgaaaatgcacctaatcacatggttctaagcttaaaactgattctaaaaatcatcctatggattatctaaggtctgtaaacactttctacatcaattct 9711  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc---aaaactaaacctacaacttgttaaatctaaccatcagaa 292  Q
    |||| ||||||||||||||| ||||||| |||||||| ||||||| |||| |||||||   |||||||||||||| || |||||||||||| ||||||||    
9712 acaagtttccatcatctaatcctcaattgatcactttaaacctaa-tttcaaattctccaaaaaactaaacctac-acatgttaaatctaatcatcagaa 9809  T
293 ttataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    | || | |||||||||||||||||||||||||||||||||||||||||||    
9810 tcat-aggcttaagaagattgaatgttagtctcacccttaccttaacaaa 9858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 144; Significance: 1e-75; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 108 - 342
Target Start/End: Original strand, 447237 - 447470
Alignment:
108 ctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccat 207  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||| |||||||    
447237 ctaatcacatggttcaaagcttaaaattgattctaaacatcaccctatggattatctaaggtctgtacacactttctacatcaattctacaagtttccat 447336  T
208 catctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaag 306  Q
    |||||||| ||||||| |||||| ||||||  | |||||||||||| |||||||| |||||||| |||||||||||| ||||||||| || | |||||||    
447337 catctaatcctcaatt-atcactcttaaccctaatttccaattctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcat-aggcttaag 447434  T
307 aagattgaatgttagtctcacccttaccttaacaaa 342  Q
    ||||||||||||||||| ||||||||||||||||||    
447435 aagattgaatgttagtcccacccttaccttaacaaa 447470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 95 - 342
Target Start/End: Original strand, 498134 - 498380
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||| || |||||||||| || |||||    
498134 tacgaaaatccacctaatcacatggttcaaagcttaaaattgattataaacataaccctatggattatctaaggtctatacacactttctacatcaattc 498233  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||  | |||||||||||| |||||||| |||||||| |||||||||||| |||||||||    
498234 tacaagtttccatcatctaatcctcaatt-atcactcttaaccctaatttccaattctcaaaaactaaccctacaacatgttaaatctaatcatcagaat 498332  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
     || | |||||||||||||||||||||||| |||| |||||||| ||||    
498333 cat-aggcttaagaagattgaatgttagtcccaccattaccttatcaaa 498380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 498901 - 499010
Alignment:
128 ttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatc 227  Q
    ||||||||||||| ||  |||| || | || |||||||||||||||| ||| |||||| || ||||| ||| || |||||||||||||  |||||| ||     
498901 ttaaaactgattccaattatcatccaatgggttatctaaggtctgtacacagtttctacatcaattcaacagttctccatcatctaatcatcaattcatt 499000  T
228 acttttaacc 237  Q
    ||||||||||    
499001 acttttaacc 499010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 162450 - 162393
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaag 167  Q
    |||| |||||||| || ||||||||||||||||| ||||| |||| | ||||||||||    
162450 aatcccatggttctaaccttaaaactgattctaatcatcatcctatgcattatctaag 162393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 96 - 342
Target Start/End: Original strand, 15792506 - 15792751
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||    
15792506 acgaaaatccacctaatcacatggttcaaagcttaaaactggttctaaacatcaccctatggattatctaaggtctgtacacactttctacatcaattct 15792605  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||  | |||||||||||| |||||||| |||||||| |||||||||||| |||||||||     
15792606 acaagtttccatcatctaatcctcaatt-atcactcttaaccctaatttccaattctcaaaaactaatcctacaacatgttaaatctaatcatcagaatc 15792704  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    || | ||||||||| |||||||||||||| ||||||||||||||||||    
15792705 at-aggcttaagaaaattgaatgttagtcccacccttaccttaacaaa 15792751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 95 - 338
Target Start/End: Original strand, 12841375 - 12841617
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| ||  ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| || ||||     
12841375 tacgaaaatccacttaatctcatggttcaaagcttaaaattgattctaaacatcaccctatggattatctaatgtctgtaaacactttctacatcaattt 12841474  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
     ||| |||| |||||||||||  ||||||  ||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||  ||||||||     
12841475 aacactttttcatcatctaatcatcaattcctcacttttaacctaattctccaattctcaaaactaaacctccaacatgttaaatctaattatcagaatc 12841574  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||   |||||||||||||||||||||||| ||||||||||||||    
12841575 at-gggcttaagaagattgaatgttagtcccacccttaccttaa 12841617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 95 - 338
Target Start/End: Complemental strand, 14852265 - 14852023
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| |||| || |||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||| || ||||||| || |||||    
14852265 tacgaaaatccatcaaaacacatggttctaagcttaaaactgattctaaacatcaccccatggattatctaaggtctgtacacgctttctacatcaattc 14852166  T
195 tacaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatcagaa 292  Q
    ||||| ||||||||||||||| ||||||| |||||| |||| ||||| |||||||||||  |||||||| ||||||||||||||||||||| ||||||||    
14852165 tacaaatttccatcatctaatcctcaatt-atcactcttaatcctaa-tttccaattctaaaaaactaaccctacaacttgttaaatctaatcatcagaa 14852068  T
293 ttataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||| || ||||||||||||||||||||||||  |||||||||||||    
14852067 tta-aaggcttaagaagattgaatgttagtccaacccttaccttaa 14852023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 99 - 369
Target Start/End: Original strand, 26790070 - 26790338
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||| || |||| ||||    
26790070 aaaatccacctaatcacatggttcaaagcttaaaactgattttaaacatcaccctatgaattatctaaggtctgtatacactttctacatcaattataca 26790169  T
199 a-ttttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattat 296  Q
    | |||||||||||||||  |||||||  ||||||||||||||| |||| ||||||| |||||||||||||| || |||||||||||| ||||| ||| ||    
26790170 agttttccatcatctaaccctcaattgctcacttttaacctaa-tttcaaattctcaaaaactaaacctac-acatgttaaatctaatcatcaaaatcat 26790267  T
297 aaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttct 369  Q
    | | |||||||| ||||||||||||||||||||||||||| |  | |||||| ||| ||||||||||||||||    
26790268 aga-cttaagaaaattgaatgttagtctcacccttacctt-atgattcaaaatcggcagcctctcttggttct 26790338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 112 - 337
Target Start/End: Complemental strand, 26049844 - 26049620
Alignment:
112 tcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatc 211  Q
    |||||| |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||| |||||||||||    
26049844 tcacatagttctaagcttaaaactgattataaacatcaccctatggattatctaaggtctgtacacactttctacatcaattctacaagtttccatcatc 26049745  T
212 taattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaaga 310  Q
    |||| ||||||| |||||| ||||||  | |||||||||||| |||||||| |||||||| |||||||||||| ||||| ||| || | |||||||||||    
26049744 taatcctcaatt-atcactcttaaccctaatttccaattctcaaaaactaaccctacaacatgttaaatctaatcatcataatcat-aggcttaagaaga 26049647  T
311 ttgaatgttagtctcacccttacctta 337  Q
    ||||||||||||| |||||||||||||    
26049646 ttgaatgttagtcccacccttacctta 26049620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 96 - 338
Target Start/End: Complemental strand, 32306392 - 32306151
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| | ||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| |||| |||||||||| || ||||||    
32306392 acgaaaatgcatcaattcacatggttttaagcttaaaactgattctaaacatcagcctatggattatctaaggtttgtacacactttctacatcaattct 32306293  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||| |||| | |||| ||||||| |||||| ||||||  | |||||||||||| |||||||| |||||||| |||||||||||| ||||| |||     
32306292 acaagttttcatcgtttaatcctcaatt-atcactcttaaccctaatttccaattctcaaaaactaaccctacaacatgttaaatctaatcatcaaaatc 32306194  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    || | |||||||||||||||||||||||| ||||||||||||||    
32306193 at-aggcttaagaagattgaatgttagtcccacccttaccttaa 32306151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 95 - 338
Target Start/End: Original strand, 17334011 - 17334250
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| || |||||    
17334011 tacgaaaatccacctaatctcatggttcaaagcttaaaattgattctaaacatcaccctatggattatctaaggtctataaacactttctacatcaattc 17334110  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    ||||||| | ||||||||||   ||||||  ||| | ||||||  | ||||||| | |||||||| ||||||| || |||||||||||| ||||||||||    
17334111 tacaattctacatcatctaaccatcaatt-ctcattcttaaccctaatttccaactttcaaaact-aacctac-acatgttaaatctaatcatcagaatt 17334207  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||  |||||||||  |||||||| ||||||||||||||||||||    
17334208 at-cagcttaagagaattgaatgctagtctcacccttaccttaa 17334250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 96 - 338
Target Start/End: Original strand, 14825825 - 14826063
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||      
14825825 acgaaaattcaccaaatcacatggttcaaagctttaaactgattctaagcatcaccctatggattatctaaggtctgtaaacactttctacatcaattta 14825924  T
196 acaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
     ||||| | |||||||||    |||||| || ||| |||| |||| ||||||||||||  ||||||| ||||||||||||||||||||   ||||||||     
14825925 gcaattctacatcatctatccatcaatt-atgactcttaaccctagttttccaattcttgaaactaatcctacaacttgttaaatcta---atcagaatc 14826020  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||| | ||||| || ||||| |||||||||||||||||||||||    
14826021 ataga-cttaaaaaaattgagtgttagtctcacccttaccttaa 14826063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 99 - 278
Target Start/End: Original strand, 14651438 - 14651618
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||||||| |||||| |||||||| || |||||||||||||| ||  ||||||||| ||||||||||||||||||| ||| |||||| || |||||||||    
14651438 aaaattcacctaatctcatggttctaaccttaaaactgattccaattatcaccctatggattatctaaggtctgtacacagtttctacatcaattctaca 14651537  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaa-aactaaacctacaacttgttaaa 278  Q
    | |||||||||| |||| ||||||| ||||||||||||||||||  | ||||||||| |||||||| |||||| |||||||    
14651538 agtttccatcatttaatcctcaattgatcacttttaacctaattcccaaattctcaagaactaaacatacaacatgttaaa 14651618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 12611880 - 12611970
Alignment:
255 aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaa 346  Q
    ||||||||||| |||| ||||||||||||  |||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||    
12611880 aaactaaacctccaacatgttaaatctaattatcagaatcatag-gcttaagaagattgaatgttagtctcacccttaccttaagaaatcaa 12611970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 53081542 - 53081303
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| |||||||||||||| ||| |||||| ||| ||||    |||| ||||  ||||||||||||| |||| ||| |||||| || |||       
53081542 acgaaaattcacctaatcacatggtttaaaccttaaagctggttcttgtaatcatcctatagattatctaaggtatgtacacagtttctacatcaatcta 53081443  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    |||||| | |||||  ||||  ||||||  ||||||| | |||||||| | | ||||| ||| ||| | |||| |||||||||| ||| |||||||||||    
53081442 acaattctacatcaattaatcatcaatttctcactttaaccctaatttccaacttctctaaattaatcataca-cttgttaaatttaatcatcagaatta 53081344  T
296 taaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     | | ||||| ||||||||||| |||||||||||||||||||    
53081343 caga-cttaataagattgaatgctagtctcacccttacctta 53081303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 245 - 337
Target Start/End: Complemental strand, 23802496 - 23802406
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||| |||||||| |||| ||||||||||||  |||||||| |||  ||||||||||||||||||||||||||||||||||||||    
23802496 ccaattctcaaa-ctaaacctccaacatgttaaatctaattatcagaatcatag-gcttaagaagattgaatgttagtctcacccttacctta 23802406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 110 - 270
Target Start/End: Original strand, 50160910 - 50161072
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattt-tccatc 208  Q
    |||| |||||||| || |||| |||||||||||||||||| |||| | ||||||||||||||||| | | |||||| || ||||| ||||||| | | ||    
50160910 aatcccatggttctaaccttagaactgattctaaacatcatcctatgaattatctaaggtctgtacatagtttctacatcaattcaacaatttattcctc 50161009  T
209 atctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaac 270  Q
    |||||||  |||| |  |||||||||| ||||||| || |||||| |||||| ||||||||||    
50161010 atctaatcatcaaatcctcacttttaaccctaattctcaaattctaaaaactcaacctacaac 50161072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 19739563 - 19739690
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||| ||| || |||||||||||||| ||  |||| |||  |||||| |||||||||||| ||| |||||| || ||||| ||||||||||| ||    
19739563 aatctcatgtttctaatcttaaaactgattccaattatcatcctgtggattacctaaggtctgtacacagtttctacatcaattcaacaattttccaaca 19739662  T
210 tctaattctcaattaatcacttttaacc 237  Q
    ||||||  |||||| |||||||||||||    
19739663 tctaatcatcaattcatcacttttaacc 19739690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 344
Target Start/End: Original strand, 3485796 - 3485924
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||||||||||||||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||| ||   ||||||| ||| | |||||||  |||||    
3485796 tcaattaatcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcataga-cttaagattattga 3485894  T
315 atgttagtctcacccttaccttaacaaatc 344  Q
    ||||||||||||||||||| |||| |||||    
3485895 atgttagtctcacccttacattaataaatc 3485924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 51463111 - 51463031
Alignment:
255 aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctt 336  Q
    ||||||||||| |||| ||||||||||||  |||| ||| |||  |||||||||||||||||||||||||||||||||||||    
51463111 aaactaaacctccaacatgttaaatctaattatcaaaatcatag-gcttaagaagattgaatgttagtctcacccttacctt 51463031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 337
Target Start/End: Original strand, 16043772 - 16044010
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| ||| ||||||||||||||| || ||||||| ||||||  |  |||| |||| ||||||||||||||||||| ||| |||||| || ||||| |||    
16043772 aaaaatcacctaatcacatggttctaaccttaaaattgattcctataatcatcctatggattatctaaggtctgtacacattttctacatcaattcaaca 16043871  T
199 attttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattat 296  Q
     |||| |||||  ||||  |||||| |||||| |||| ||||||| || ||| ||| |||||||| |||| ||| ||||||||  ||   ||||||  ||    
16043872 gtttttcatcaattaatcatcaatt-atcactcttaaccctaattctcaaatcctcaaaaactaatcctataacatgttaaatacaattttcagaaccat 16043970  T
297 aaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    | | |||||||  | || |||||||||||||||||||||||    
16043971 aga-cttaagattactgcatgttagtctcacccttacctta 16044010  T

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Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 27996616 - 27996743
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||| ||| || |||||||||||||| ||  |||  | || ||||||||||||||||||| ||| |||||| || ||||  ||| ||||||||||    
27996616 aatctcatgtttctaaccttaaaactgattccaattatcctcatatggattatctaaggtctgtacacaatttctacattaatttaacagttttccatca 27996715  T
210 tctaattctcaattaatcacttttaacc 237  Q
    ||||||  |||||| |||||||||||||    
27996716 tctaatcatcaattcatcacttttaacc 27996743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 21189188 - 21189075
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    ||||||||||||| || ||||||||||||||||||||||| |||| | ||  ||||||| ||||| ||| |||||| |  ||||| |||  |||||||||    
21189188 aatcacatggttctaaccttaaaactgattctaaacatcaacctatgaatcttctaaggcctgtacacagtttctacaccaattcaacatgtttccatca 21189089  T
210 tctaattctcaatt 223  Q
    |||||  |||||||    
21189088 tctaaccctcaatt 21189075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 40907801 - 40907904
Alignment:
130 aaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcac 229  Q
    |||||||||||||| ||||| |||| | |||||||||||||| ||  || |||||| || ||||| |||  |||||||||||||||  |||||| |||||    
40907801 aaaactgattctaatcatcatcctatgcattatctaaggtctatactcagtttctacattaattcaacacgtttccatcatctaatcatcaatttatcac 40907900  T
230 tttt 233  Q
    ||||    
40907901 tttt 40907904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 54797952 - 54797886
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||||    
54797952 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctta 54797886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 15100009 - 15100095
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttcta 185  Q
    ||||||||| | ||||| ||||| ||| ||||||||||||||     ||||||||| ||||||||||||||||||||||| ||||||    
15100009 aaaattcatttgatcacttggtttaaaccttaaaactgattcctgtaatcaccctatggattatctaaggtctgtaaacagtttcta 15100095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 12287422 - 12287353
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||  |||||||||||||||| || |||| |  ||||||||| |||||||||||||||||||    
12287422 acttgttaaatacaaccatcagaattatacagattaatagaattgaatgtcagtctcacccttaccttaa 12287353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 15489582 - 15489462
Alignment:
225 atcacttttaacc-taattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagt 322  Q
    ||||||||||||| ||||| || ||||||||||| ||||||||||||| ||||||||  ||   ||||||||||| | || ||||  ||||||||||| |    
15489582 atcacttttaaccctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaattataga-ctcaagattattgaatgttatt 15489484  T
323 ctcacccttaccttaacaaatc 344  Q
    | |||||||||||||| |||||    
15489483 cccacccttaccttaagaaatc 15489462  T

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Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 334
Target Start/End: Original strand, 14281254 - 14281317
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    |||||||||| ||| ||||||||||| | | ||||| ||||||||||||||||||||||||||||    
14281254 cttgttaaatttaatcatcagaattacata-cttaataagattgaatgttagtctcacccttacc 14281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 270
Target Start/End: Complemental strand, 13591302 - 13591135
Alignment:
104 tcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaatttt 203  Q
    ||||| |||| |||| ||| || |||||||| ||||| || ||||| |||| ||||||| |||||| |||| ||| |||||  || || || ||| ||||    
13591302 tcatccaatctcatgtttctaaacttaaaaccgattccaatcatcatcctatggattatataaggtatgtacacagtttctccatcaactcaacagtttt 13591203  T
204 ccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaac 270  Q
    | ||||||||||  ||||||  |||||||||| ||||||| || |||||| ||| || ||| ||||||    
13591202 ctatcatctaatcatcaattcctcacttttaaccctaattctcaaattctaaaacctcaacatacaac 13591135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 337
Target Start/End: Complemental strand, 52242596 - 52242418
Alignment:
159 ttatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaa 257  Q
    |||||||||||||||||||| |||||| || |||   |||| ||| ||||   |||| |||||||  || |||| | ||||||||||||| ||||| ||     
52242596 ttatctaaggtctgtaaacagtttctacatcaatctaacaacttttcatccattaatcctcaatttctctctttaaccctaattttccaacttctctaat 52242497  T
258 ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
      || | |||| |||||||| | ||||||||||||| ||| || |||| |  |||||||| |||||||||||||||||||    
52242496 tcaatcataca-cttgttaattataaccatcagaatcatacagattaatagaattgaatgctagtctcacccttacctta 52242418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 337
Target Start/End: Complemental strand, 50221673 - 50221552
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||||||| ||||||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||| ||   ||||||| |   | |||||||  |||||    
50221673 tcaattaaccacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatga-cttaagattattga 50221575  T
315 atgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||    
50221574 atgttagtctcacccttacctta 50221552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 22354683 - 22354720
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||| |||||||||||||    
22354683 gcttaagaagattgaatgttagtcccacccttacctta 22354720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 3838106 - 3838174
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||  || ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
3838106 acttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 3838174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 20150853 - 20150921
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||  || ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
20150853 acttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 20150921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 341
Target Start/End: Complemental strand, 14970054 - 14970023
Alignment:
310 attgaatgttagtctcacccttaccttaacaa 341  Q
    ||||||||||||||||||||||||||||||||    
14970054 attgaatgttagtctcacccttaccttaacaa 14970023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 8711346 - 8711396
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatca 149  Q
    |||||||| | |||| |||||||| || |||||||||||||||||||||||    
8711346 aaaattcacccaatctcatggttctaaccttaaaactgattctaaacatca 8711396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 15011589 - 15011528
Alignment:
219 caattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaat 279  Q
    ||||| ||||||||||||| |||||  | ||| |||||||||||||||||||| ||||||||    
15011589 caatttatcacttttaaccctaattcccaaatcctcaaaactaaacctacaacatgttaaat 15011528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 25031092 - 25031157
Alignment:
218 tcaattaatcacttttaa-cctaattttccaattctc-aaaact-aaacctacaacttgttaaatc 280  Q
    |||||||||||||||||| ||||||| || ||||||| |||||| ||||||||||| |||||||||    
25031092 tcaattaatcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatc 25031157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 336
Target Start/End: Original strand, 52313483 - 52313595
Alignment:
225 atcacttttaacct-aattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagt 322  Q
    |||||| ||||||| |||| || ||||||||||| ||||||||||||| | ||||||  ||   ||||||| ||| | |||||||  |||||||||||||    
52313483 atcactcttaaccttaattctctaattctcaaaaactaaacctacaacatattaaatacaattttcagaatcataga-cttaagattattgaatgttagt 52313581  T
323 ctcacccttacctt 336  Q
    | ||||||||||||    
52313582 cccacccttacctt 52313595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 11075 - 11023
Alignment:
285 catcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
11075 catcagaattatatagattaatacaattgaatgctagtctcacccttacctta 11023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 21138 - 21190
Alignment:
228 acttttaacctaattttccaattctcaaaacta-aacctacaacttgttaaat 279  Q
    ||||||||||||||| || ||| |||||||||| |||||||||| ||||||||    
21138 acttttaacctaattctcaaatcctcaaaactacaacctacaacatgttaaat 21190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 13882201 - 13882273
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtct 171  Q
    |||||||||| |||| ||| |||| || ||||||| ||||||||||||||| |||| | ||  ||||||||||    
13882201 aaaattcatccaatcccattgttctaaccttaaaattgattctaaacatcaacctatgaatcttctaaggtct 13882273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 18238862 - 18238826
Alignment:
301 cttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||  ||||||||||||||||||||||||||||    
18238862 cttaagattattgaatgttagtctcacccttacctta 18238826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 95 - 338
Target Start/End: Original strand, 18 - 260
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| |||| || |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||    
18 tacgaaaatccatcaaaacacatgtttctaagcttaaaactgattctaaacatcaccctatggattatctaaagtctgtacacactttctacatcaattc 117  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||  | |||||||||||| |||||||| |||||||| |||||||||||| |||||||||    
118 tacaagtttccatcatctaatcctcaatt-atcactcttaaccctaatttccaattctcaaaaactaaccctacaacatgttaaatctaatcatcagaat 216  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    || || |||||||||||||||||||||||| ||||||||||||||    
217 ta-aaggcttaagaagattgaatgttagtcgcacccttaccttaa 260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 95 - 333
Target Start/End: Complemental strand, 19094 - 18857
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||| ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||| | |||| || |||||    
19094 tacgaaaatccacctaatcgcatggttcaaagcttaaaactgattctaaacatcaccttatggatcatctaaggtctggaaacattctctacatcaattc 18995  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||||||||||||||| ||||||| |||||||| | ||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||    
18994 tacaagtttccatcatctaatcctcaattgatcactttaaccctaa-tttccaattctcaaaaactaatcctacaacttgttaaatctaatcatcagaat 18896  T
294 tataaagcttaagaagattgaatgttagtctcacccttac 333  Q
    |||| | |||||||| ||||||||||||||||||||||||    
18895 tataga-cttaagaaaattgaatgttagtctcacccttac 18857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 96 - 374
Target Start/End: Original strand, 58548 - 58824
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||    
58548 acgaaaattcacctaatcacatggttcaatgcttaaaactgattctaaacatcaccctatggattatctaaggtctgtaaacactttctacatcaattct 58647  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattct-caaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| |||||||||| |||| |||||||  ||||| ||||||  |  |||||||||| ||||||||| ||| ||||||||||||||||   ||||||||     
58648 acaagtttccatcatttaatcctcaatt-ctcactcttaaccctaaattccaattctccaaaactaatccttcaacttgttaaatcta---atcagaatc 58743  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa--caaatcaaaaccggaagcctctcttggttctcttct 374  Q
    ||| | ||||| || |||||||||||||||||||||||||||||   ||||| |||  || |||||||||||||||||||||    
58744 ataga-cttaataaaattgaatgttagtctcacccttaccttaatcaaaatcgaaatgggcagcctctcttggttctcttct 58824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 96 - 342
Target Start/End: Complemental strand, 62569 - 62326
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgatt-ctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||| ||  | |||| |||| ||||||||||||||||||||||| |||||| || |||      
62569 acgaaaattcacctaatcacatggtttaaaccttaaaactgatttctgta-atcatcctatggattatctaaggtctgtaaacaatttctacatcaatct 62471  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
     |||| ||| |||||  ||||  ||||||  ||||||| ||||||||| ||||| ||||| ||| ||| ||||||  ||||||||| ||| |||||||||    
62470 aacaacttttcatcaattaatcatcaattcctcacttt-aacctaattctccaacttctctaaattaatcctacat-ttgttaaat-taatcatcagaat 62374  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaa 342  Q
    || | | ||||  ||||||||||| ||||||||||||||||||| ||||    
62373 tacaga-cttattaagattgaatgctagtctcacccttaccttagcaaa 62326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 95 - 337
Target Start/End: Complemental strand, 16327 - 16085
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||||| || |||||    
16327 tacgaaaatccacctaatcacatggttcaaagcttaaagttgattctaaacatcaccctatggattatctaaggtctgtacacactttctacatcaattc 16228  T
195 tacaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaa 292  Q
    ||||| ||||||||||||| | ||||||| |||||| |||| ||||||| ||||| | || |||||||| ||||||||||| ||||||||| |||| |||    
16227 tacaagtttccatcatctagtcctcaatt-atcactcttaaccctaattctccaactttcaaaaactaatcctacaacttgctaaatctaatcatccgaa 16129  T
293 ttataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||| | |||||||| ||||||||||||||||||||||||||||    
16128 ttataga-cttaagaaaattgaatgttagtctcacccttacctta 16085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 99 - 337
Target Start/End: Complemental strand, 25510 - 25272
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| || |||||||||    
25510 aaaatccacctaatcacatggttcaaagcttaaaactgattctaaacatcaccctatggattatctaaggtatgtacacactttctacatcaattctaca 25411  T
199 attttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattat 296  Q
    | |||| |||||||||| ||||||| |||||| |||| ||||||| ||||| | || |||||||| ||||||||||| ||||||||| ||||||||||||    
25410 agtttctatcatctaatcctcaatt-atcactcttaaccctaattctccaactttcaaaaactaatcctacaacttgctaaatctaatcatcagaattat 25312  T
297 aaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
      | |||||||| ||||||||||||||||||||||||||||    
25311 cga-cttaagaaaattgaatgttagtctcacccttacctta 25272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 95 - 338
Target Start/End: Complemental strand, 13791 - 13551
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||| ||  ||||    
13791 tacgaaaatccacctaatctcatggttcaaagcttaaaactgattctaaacatcaccctatagattatcaaaggtctgtaaacaccttctacatcgattc 13692  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    | ||| ||| || ||| || | ||||||| |||||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||||||||||    
13691 tgcaagttttcaccatatactcctcaattgatcacttttaacctaa-tttccaatt-tccaaactaaacctacaacttgttaagtctaatcatcagaatt 13594  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    | |  |||||||||||||||||||||||| ||||||||||||||    
13593 a-acggcttaagaagattgaatgttagtcccacccttaccttaa 13551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 121; Significance: 7e-62; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 90 - 344
Target Start/End: Complemental strand, 220578 - 220327
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatata 189  Q
    |||| ||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||     
220578 ttttttacgaaaatgcatcaaatcacatgggtctaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtatacactttctacatc 220479  T
190 aattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatc 288  Q
    ||||| ||| |||| |||||||||||  |||||| |||||| ||||||  | |||| ||||||| ||||||||||||||  | |||||||||||| ||||    
220478 aattcaacagttttacatcatctaatcatcaatt-atcactcttaaccctaatttcaaattctcaaaaactaaacctac--catgttaaatctaatcatc 220382  T
289 agaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    ||||| || | |||||||||||||||||||||||| |||||||||||||| |||||    
220381 agaatcat-aggcttaagaagattgaatgttagtcccacccttaccttaagaaatc 220327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 228321 - 228393
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    ||||||||| | |||| |||||||| ||| || |||| |  |||||||| || ||||||||||||||||||||    
228321 acttgttaattataactatcagaatcatacagattaatagaattgaatgctaatctcacccttaccttaacaa 228393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 96 - 378
Target Start/End: Complemental strand, 75265 - 74985
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||||||||| || ||||||||||||||||||||||||| || ||||||||||||||||||| ||  |||||| || |||||     
75265 acgaaaatgcacctaatcacatggttctaaccttaaaactgattctaaacatcaccttatggattatctaaggtctgtacactttttctacatcaattca 75166  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    ||| |||| |||||||||||  |||||| | |||||||||||  | || | |||||||||||||||||||||||| ||||||||||||  || ||||| |    
75165 acagtttttcatcatctaatcatcaattcaccacttttaaccctaattccaaattctcaaaactaaacctacaacatgttaaatctaattataagaataa 75066  T
296 taaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttcttctc 378  Q
    | | |||||||||||||||||||||||| |||||||||||||| |||||  | | || ||||||||||||||||  |||||||    
75065 t-atgcttaagaagattgaatgttagtcccacccttaccttaataaatc-gatcgggcagcctctcttggttcttctcttctc 74985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 95 - 338
Target Start/End: Complemental strand, 55053 - 54811
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| | ||||||||| || |||| || ||||||  || |||||    
55053 tacgaaaattcatcaaaacacatggttctaagcttaaaactgattctaaacatcaccctatgaattatctaaagtatgtacacgctttctccatcaattc 54954  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||  | |||||||||||| |||||||| ||||||||||||||||||||| ||||| |||    
54953 tacaaatttccatcatctaatcctcaatt-atcactcttaaccctaatttccaattctcaaaaactaaccctacaacttgttaaatctaatcatcataat 54855  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    || || |  ||||||||||||||||||||| ||| ||||||||||    
54854 ta-aaggtataagaagattgaatgttagtcccactcttaccttaa 54811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 95 - 344
Target Start/End: Complemental strand, 4243 - 3997
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| || |||||    
4243 tacgaaaatccacctaatctcatggttcaaaacttaaaactgattctaaacatcaccctatggattatctaaggtctgtaaccactttctacatcaattc 4144  T
195 tacaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||||| | |||||||||    |||||| || ||| |||| ||||||||||||||||| |||||| ||||||| || |||||||| |||||||||||||    
4143 tacaattctacatcatctatccatcaatt-atgactcttaaccctaattttccaattcttaaaact-aacctac-acatgttaaatataaccatcagaat 4047  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
     ||  |||||||||  ||||||||||||||||||||||||||||| |||||    
4046 cat-cagcttaagagaattgaatgttagtctcacccttaccttaagaaatc 3997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 114; Significance: 1e-57; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 96 - 336
Target Start/End: Original strand, 7021 - 7260
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||| ||| |||| ||| |||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | || ||||||    
7021 acgagaatgcatcaaattacatggttctcagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtacacactttccacatcaattct 7120  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctca-aaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||| ||||||||| | ||||||| |||||| ||||||  | ||||||| ||||| |||||||||||||||| |||||||| ||| |||||||||     
7121 acaagttttcatcatctagtcctcaatt-atcactcttaaccctaatttccaaatctcacaaactaaacctacaacatgttaaatataatcatcagaatc 7219  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctt 336  Q
    || | |||||||||||||||||||||||| ||||||||||||    
7220 at-aggcttaagaagattgaatgttagtcccacccttacctt 7260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 114 - 337
Target Start/End: Original strand, 1387 - 1609
Alignment:
114 acatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatcta 213  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| | || |||||||||| |||||||||||||    
1387 acatggttctaagcttaaaactgattctaaacatcaccctatggattatataaggtctgtacacactttccacatcaattctacaagtttccatcatcta 1486  T
214 attctcaattaatcacttttaacctaattttccaattctca-aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagatt 312  Q
    || ||||||| |||||| ||||||  | ||||||||||| | |||||||||||||||| |||||||||||| ||||||||| || | ||||||||| |||    
1487 atcctcaatt-atcactcttaaccctaatttccaattctaataaactaaacctacaacatgttaaatctaatcatcagaatcat-aggcttaagaatatt 1584  T
313 gaatgttagtctcacccttacctta 337  Q
    ||||||||||| |||| || |||||    
1585 gaatgttagtcccacctttgcctta 1609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 337
Target Start/End: Complemental strand, 60127 - 59886
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    |||||||||||| ||||| ||||||||  |||| ||| | |||||| | | |||| |||| ||| | ||||||| ||||||||| |||| | || |||      
60127 tacgaaaattcacctaattacatggttttaagcctaacattgattccagatatcatcctatggaatgtctaaggcctgtaaacagtttccacatcaatct 60028  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
     |||||| | |||||  |||| | |||||  |||| |||||||| | ||||||| ||||| ||| ||| ||||| |||||||||||  ||||||||||||    
60027 aacaattctacatcaattaatccccaatttctcac-tttaaccttaatttccaacttctctaaattaatcctac-acttgttaaatacaaccatcagaat 59930  T
294 tataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||| | ||||| |  |||||||| |||||||||||||||||||    
59929 tatacaacttaatagaattgaatgctagtctcacccttacctta 59886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 126413 - 126360
Alignment:
228 acttttaacctaattttccaattctcaaaacta-aacctacaacttgttaaatc 280  Q
    ||||||||||||||| || ||| |||||||||| || |||||||||||||||||    
126413 acttttaacctaattctcaaatcctcaaaactacaatctacaacttgttaaatc 126360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 95 - 283
Target Start/End: Complemental strand, 192 - 5
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| |||| || |||||||||| |||| ||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||| || |||||    
192 tacgaaaatccatcaaaacacatggttctaagcctaaaactgactctaaacatcactctatggattatctaaggtctgtacacactttctacatcaattc 93  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaa 283  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||  | ||||||||||||||||||||||||||||||||||||||||||    
92 tacaagtttccatcatctaatcctcaatt-atcactcttaaccctaatttccaattctcaaaactaaacctacaacttgttaaatctaa 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 95 - 372
Target Start/End: Complemental strand, 1844 - 1569
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| || |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||    
1844 tacgaaaatccacctaaacacatggtttaaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtaaacactttctacatcaattc 1745  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    ||||||| | |||||||||    |||||| |||||| ||||||  | ||||||| | |||||||| ||||||| || |||||||||||| ||||| ||||    
1744 tacaattctacatcatctatccatcaatt-atcactcttaaccctaatttccaactatcaaaact-aacctac-acatgttaaatctaatcatcataatt 1648  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa--caaatcaaaaccggaagcctctcttggttctctt 372  Q
    ||  |||||||||   ||||||||||||||||||||||||||||   ||||| ||| | | |||||||||||||||||||    
1647 at-cagcttaagagagttgaatgttagtctcacccttaccttaatcaaaatcgaaatcagcagcctctcttggttctctt 1569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 110 - 369
Target Start/End: Original strand, 355 - 612
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| || ||||| |||| |||||| ||    
355 aatcccatggttctaagcttaaaactgattctaaacatcaccctatggattatctaaggtatgtacacactttctacatcaattccacaagtttccacca 454  T
210 tctaattctcaattaatcacttttaacctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaa 308  Q
    |||||| |||||||| ||||| ||||||  | |||||||||||||||| |||| |||||||| ||||||||||||  |||| ||| | || | | |||||    
455 tctaatcctcaatta-tcactcttaaccctaatttccaattctcaaaaactaaccctacaacatgttaaatctaatgatcataatca-aaggttgaagaa 552  T
309 gattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttct 369  Q
    |||||||||||||||||||||||||||||  |  || ||| ||| ||||||||||||||||    
553 gattgaatgttagtctcacccttaccttatgat-tcgaaatcggcagcctctcttggttct 612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 17575 - 17335
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || |||||     
17575 acgaaaatgcatcaaatcacatggttctaagcttaaaactgattctaaacatcaccctatggattatctaaggtctgtacacactttctacatcaattca 17476  T
196 acaattttccatcatctaattctcaattaatcacttttaac-ctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
     || |||  |||||||||||  |||||| || ||| ||||| |||| |||| ||||||| ||||||||||||||||  ||||||||||||  ||||||||    
17475 gcagtttctcatcatctaatcatcaatt-attactcttaacactaa-tttcaaattctcaaaaactaaacctacaaaatgttaaatctaattatcagaat 17378  T
294 tataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     || | ||||||||||| |||||||||||| || ||||||||||    
17377 cat-atgcttaagaagactgaatgttagtcccaaccttacctta 17335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 117 - 323
Target Start/End: Complemental strand, 31854 - 31650
Alignment:
117 tggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaatt 216  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||| ||| ||||  ||||||||||     
31854 tggttctaagcttaaaactgattctaaacatcaccctatggattatctaaggtttgtacacactttctatatcaattcaacagttttttatcatctaatc 31755  T
217 ctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaat 316  Q
     |||||| ||| || ||||||  | |||| ||||||||||| |||||||||||| ||||||||||||  |||||||| || | |||||||||||||||||    
31754 atcaatt-atccctcttaaccctaatttcaaattctcaaaaataaacctacaacatgttaaatctaattatcagaatcat-aggcttaagaagattgaat 31657  T
317 gttagtc 323  Q
    |||||||    
31656 gttagtc 31650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 96 - 338
Target Start/End: Original strand, 22635 - 22873
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||      
22635 acgaaaattcaccaaatcacatggttcaaagctttaaactgattctaagcatcaccctatggattatctaaggtctgtaaacactttctacatcaattta 22734  T
196 acaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
     ||||| | |||||||||    |||||| || ||| |||| |||| ||||||||||||  ||||||| ||||||||||||||||||||   ||||||||     
22735 gcaattctacatcatctatccatcaatt-atgactcttaaccctagttttccaattcttgaaactaatcctacaacttgttaaatcta---atcagaatc 22830  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||| | ||||| || ||||| |||||||||||||||||||||||    
22831 ataga-cttaaaaaaattgagtgttagtctcacccttaccttaa 22873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 98; Significance: 4e-48; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 96 - 338
Target Start/End: Complemental strand, 13884 - 13646
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||      
13884 acgaaaattcaccaaatcacatggttcaaagctttaaactgattctaagcatcaccctatggattatctaaggtctgtaaacactttctacatcaattta 13785  T
196 acaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
     ||||| | |||||||||    |||||| || ||| |||| |||| ||||||||||||  ||||||| ||||||||||||||||||||   ||||||||     
13784 gcaattctacatcatctatccatcaatt-atgactcttaaccctagttttccaattcttgaaactaatcctacaacttgttaaatcta---atcagaatc 13689  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||| | ||||| || ||||| |||||||||||||||||||||||    
13688 ataga-cttaaaaaaattgagtgttagtctcacccttaccttaa 13646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 99 - 278
Target Start/End: Complemental strand, 165854 - 165674
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||||||| |||||| |||||||| || |||||||||||||| ||  ||||||||| ||||||||||||||||||| ||| |||||| || |||||||||    
165854 aaaattcacctaatctcatggttctaaccttaaaactgattccaattatcaccctatggattatctaaggtctgtacacagtttctacatcaattctaca 165755  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaa-aactaaacctacaacttgttaaa 278  Q
    | |||||||||| |||| ||||||| ||||||||||||||||||  | ||||||||| |||||||| |||||| |||||||    
165754 agtttccatcatttaatcctcaattgatcacttttaacctaattcccaaattctcaagaactaaacatacaacatgttaaa 165674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 268383 - 268621
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| ||| |||||||||| ||| |||||||||| |||     |||| |||| ||||||||||||||||||| ||| |||||| || |||       
268383 acgaaaattcaccta-tcacatggtttaaaccttaaaactggttcctgtaatcatcctatggattatctaaggtctgtacacagtttctacatcaatcta 268481  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    |||||| | |||||  |||| |||||||  ||||||| | |||||| | | | ||||| ||| ||| ||||| ||||||||||||||| |||||||||||    
268482 acaattctacatcaattaatcctcaatttctcactttaaccctaatctccaacttctctaaattaatcctac-acttgttaaatctaatcatcagaatta 268580  T
296 taaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
      | |||||| |  |||||||  |||||||||||||||||||    
268581 -caggcttaatataattgaataatagtctcacccttacctta 268621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 99 - 337
Target Start/End: Original strand, 16147 - 16385
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| ||| |||||| |||||||| || |||||||||||||| ||  ||||||||| |||||||||||||||||||   | |||||| || |||||||||    
16147 aaaaatcacctaatctcatggttctaaccttaaaactgattccaattatcaccctatggattatctaaggtctgtacttagtttctacattaattctaca 16246  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattata 297  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||  | ||||||| ||||||||||||||||| |||||||   ||   ||||||| |||    
16247 attttccatcatctaatcctcaattgatcacttttaacctaattcccaaattctcaaaaactaaacctacaacatgttaaaggcaattttcagaataata 16346  T
298 aagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     | |||||||  | |||||||||||| |||||||||||||    
16347 ga-cttaagattaatgaatgttagtcccacccttacctta 16385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 10146 - 10387
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||||||||| || ||||||||| |||  |   |||| |||| ||||||||||||||||||| ||| |||||| || |||       
10146 acgaaaatgcacctaatcacatggttctaatcttaaaacttatttcagttatcatcctatggattatctaaggtctgtacacagtttctacatcaatcta 10245  T
196 acaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    ||| |||||||||||||||| ||||||| ||||||||||| |||||||  | |||||||||||||||||| ||||| || |||||  ||  ||||||||     
10246 acagttttccatcatctaatcctcaattcatcacttttaaccctaattcccaaattctcaaaactaaaccaacaacatgctaaatgcaattatcagaatc 10345  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    || | |||||||||||||||||||||||| |||||||||||||    
10346 at-aggcttaagaagattgaatgttagtcccacccttacctta 10387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 96 - 374
Target Start/End: Complemental strand, 128337 - 128062
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| |||||||||||||| ||| |||||||||| |||     |||| |||| |||||||||||||| ||| ||||||||||| || ||||||    
128337 acgaaaattcacctaatcacatggtttaaaccttaaaactggttcctgtaatcatcctatggattatctaaggtatgt-aacactttctacatcaattct 128239  T
196 acaattttccatcatctaattctcaattaatcacttttaac-ctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    |||| ||| || ||||||||  ||||||  ||||| ||||| |||||| || ||||||| |||||||| ||||| ||||||||||| ||| |||||||||    
128238 acaagttttcaccatctaatcatcaatt-ctcactcttaactctaattctcaaattctctaaaactaatcctac-acttgttaaatttaatcatcagaat 128141  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttct 374  Q
    || ||| ||||| ||||||||||| || ||||||||||||||||  ||||| ||| || || ||||||||||| |||||||    
128140 tacaaa-cttaataagattgaatgctaatctcacccttaccttagaaaatcgaaatcgcaa-cctctcttggtcctcttct 128062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 117464 - 117500
Alignment:
301 cttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||| |||||||||||||||||||||||||||||||    
117464 cttaataagattgaatgttagtctcacccttacctta 117500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 96 - 283
Target Start/End: Complemental strand, 118994 - 118807
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| |||||||||||||| |||  ||||||||| ||||    |||| |||| ||||||||||| |||||||||||||||||| || |||       
118994 acgaaaattcacctaatcacatggtttaaacattaaaactggttcttgtaatcatcctatggattatctaaagtctgtaaacactttctacatcaatcta 118895  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaa 283  Q
    ||| |||| |||||||||||  ||||||  |||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||    
118894 acactttttcatcatctaatcatcaattcctcacttttaacctagttctccaattctcaaaactaaacctccaacatgttaaatctaa 118807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 172336 - 172231
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||||||| |  ||||||||||||||||| ||||| ||||   |||||||||| |||||| ||| |||||| || ||||| |||  ||| || ||    
172336 aatcccatggttctatccttaaaactgattctaatcatcatcctattcattatctaagttctgtacacagtttctacattaattcaacacgttttcacca 172237  T
210 tctaat 215  Q
    ||||||    
172236 tctaat 172231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 22929 - 23168
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||||||||| || |||||||||||||| ||  |||| | || ||||||||||||||||||| ||| |||||| || |||       
22929 acgaaaatgcacctaatcacatggttctaaccttaaaactgattccaatgatcatcatatggattatctaaggtctgtacacaatttctacatcaatcta 23028  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    ||| |||||| | ||||||| |||||||  ||||||||||||  | || | |||||||||||   |||||||||| ||||||||||||  |||||||| |    
23029 acagttttccgttatctaatcctcaattcttcacttttaaccctaattccaaattctcaaaaactaacctacaacatgttaaatctaattatcagaatca 23128  T
296 taaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    | | | |||||||||||||||||||||| |||||||||||||    
23129 t-aggattaagaagattgaatgttagtc-cacccttacctta 23168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 96 - 332
Target Start/End: Original strand, 14073 - 14307
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||| ||||| || |||||||| ||||| ||  |||| |||| ||||||||||||||||||| ||| |||||| || |||       
14073 acgaaaatgcacctaatcacagggttctaaccttaaaaccgattccaatgatcatcctatggattatctaaggtctgtacacagtttctacatcaatcta 14172  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaatta 295  Q
    ||| |||||| | ||||||| |||||||  |||||||||| |||| || | |||||||||||   |||||||||| | ||||||||||  |||||||| |    
14173 acagttttccgttatctaatcctcaattcttcacttttaatctaa-ttccaaattctcaaaaactaacctacaacatattaaatctaattatcagaatca 14271  T
296 taaagcttaagaagattgaatgttagtctcaccctta 332  Q
    | | |||||||||||||||||||||||| ||||||||    
14272 t-aggcttaagaagattgaatgttagtcccaccctta 14307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 337
Target Start/End: Complemental strand, 103029 - 102788
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgatt-ctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||||| ||||||||||||||  |||||||| | ||||| ||  | |||| |||| ||||||||||||||||||||||| |||||| || |||      
103029 acgaaaattcacctaatcacatggttttaagcttaatattgatttctgta-atcatcctatggattatctaaggtctgtaaacagtttctacatcaatct 102931  T
195 tacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacc-tacaacttgttaaatctaaccatcagaat 293  Q
     || ||| | |||||  ||||  ||||||  |||| || | ||||||| ||| |||||| ||| | | || |||| ||||||||||  ||||||||||||    
102930 aaccattctacatcaattaatcatcaatttctcaccttaaccctaattctcccattctctaaaatcatccctaca-cttgttaaatacaaccatcagaat 102832  T
294 tataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||| || |||| |  |||||||| |||||||||||||||||||    
102831 tatatagattaatagaattgaatgctagtctcacccttacctta 102788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 115 - 338
Target Start/End: Complemental strand, 17586 - 17364
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||||| |||||| | | |||| |||| |||||||||||||||||||||||||||||| || |||||||||||| | |||||  |||    
17586 catggttttaagcttaaaattgattccagatatcatcctatggattatctaaggtctgtaaacactttctacatcaattctacaattctgcatcagttaa 17487  T
215 ttctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  ||||||  ||||||| | |||| ||| | | ||| | |||||||| ||||| |||||||||||  |||||||||||||| | | ||||| |||||||    
17486 tcatcaatttctcactttaaccctagtttccaacttcactaaaactaatcctac-acttgttaaatacaaccatcagaattacaga-cttaataagattg 17389  T
314 aatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||||    
17388 aatgttagtctcacccttaccttaa 17364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 8917 - 9159
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| || ||||||||||||||| || |||||||||||||| |   |||| |||| ||||||||||||||||||| | | |||||| |  |||       
8917 acgaaaatgcacctaatcacatggttctaaccttaaaactgattcaagttatcatcctatggattatctaaggtctgtacatagtttctacaacaatcta 9016  T
196 acaattttccatcatctaattctcaattaatcacttttaa-cctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||| |||||||||||||||| ||||||| ||||||||||| |||||||  | ||||||| |||| |||||||||||| || |||||  ||  || |||||    
9017 acagttttccatcatctaatcctcaattcatcacttttaaccctaattcccaaattctcaaaaattaaacctacaacatgctaaatggaattattagaat 9116  T
294 tataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     || | |||||||||||||||||||||||| |||||||||||||    
9117 cat-acgcttaagaagattgaatgttagtcccacccttacctta 9159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 10877 - 11001
Alignment:
112 tcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatc 211  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||| || ||||||| || |||||||||||    
10877 tcacatggttctaagcttaaaattgattctaaacatcaccctatggattatctaaggtctgtacacacttcctacatcaattctataagtttccatcatc 10976  T
212 taattctcaattaatcacttttaacc 237  Q
    |||| ||||||| |||||| ||||||    
10977 taatcctcaatt-atcactcttaacc 11001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 99 - 338
Target Start/End: Original strand, 771 - 1009
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||||||| |||||||| |||||| || || |||| |||||| ||  |||| |||| ||||||||||||||||||| | | |||||| ||||||||||||    
771 aaaattcacctaatcacttggttctaacctcaaaattgattccaataatcatcctatggattatctaaggtctgtacaaagtttctacataaattctaca 870  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattata 297  Q
     |||| |||||  ||||  ||||||  ||||||| | ||||||| || ||| ||| |||||||||||||| || |||||||||||| ||||| |||||||    
871 gtttttcatcaattaatcatcaattcttcactttaaccctaattctcaaatcctcaaaaactaaacctac-acatgttaaatctaatcatcataattata 969  T
298 aagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
     | |||||||| |||||||| ||||| || |||||||||||    
970 ga-cttaagaaaattgaatgctagtcccagccttaccttaa 1009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 57604 - 57747
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| ||| |||||| |||||||| || ||||| |||||||| ||  ||||||||| ||||||||||||||||||| ||| |||||| || |||| ||||    
57604 aaaaatcacctaatctcatggttctaaccttaatactgattccaattatcaccctatggattatctaaggtctgtacacaatttctacattaattataca 57703  T
199 attttccatcatctaattctcaattaatcacttttaacctaatt 242  Q
    | ||||||||||||||| ||||||| ||||||||||||||||||    
57704 agtttccatcatctaatcctcaattgatcacttttaacctaatt 57747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 115 - 336
Target Start/End: Complemental strand, 5681 - 5461
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| | | |||| |||| ||||||||||||||||||| |||||||||| || |||||||||||| | |||||  |||    
5681 catggttttaagcttaacattgattccagatatcatcctatggattatctaaggtctgtacacactttctacatcaattctacaattctacatcaattaa 5582  T
215 ttctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  ||||||  ||||||| | |||| ||| | | ||||| |||||||| ||||| |||||||||||  |||||||||||||| | | ||||| |||||||    
5581 tcatcaatttctcactttaaccctagtttccaacttctctaaaactaatcctac-acttgttaaatacaaccatcagaattacaga-cttaataagattg 5484  T
314 aatgttagtctcacccttacctt 336  Q
    |||||||||||||||||||||||    
5483 aatgttagtctcacccttacctt 5461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 156 - 337
Target Start/End: Complemental strand, 191978 - 191798
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaa 255  Q
    |||||||||||||| |||| |||||||||| || |||||  || |||| ||||||||||   ||||||| ||||| ||||||  | |||| |||||||||    
191978 ggattatctaaggtttgtacacactttctacatcaattcagcagtttttcatcatctaagcatcaatta-tcactcttaaccctaatttcaaattctcaa 191880  T
256 aa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    || ||||||||||||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||| |||||||||||||    
191879 aaactaaacctacaacatgttaaatctaattatcagaatcatag-gcttaagaagattgaatgttagtcccacccttacctta 191798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 86272 - 86510
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||||||||||||||||||||| ||| |  |||||||||||     |||| |||| |||||||||||||| |||||||| |||||| || |||       
86272 acgaaaattcatctaatcacatggtttaaatcacaaaactgattcctgtaatcatcctatggattatctaaggtttgtaaacagtttctacatcaatcta 86371  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctcaaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||| ||| |||||  ||||  ||||||  |||  |||||||||||| ||||| ||||| ||| ||| ||||| ||||||||||| ||| ||||||||||    
86372 acaacttttcatcaattaatcatcaattcctca-atttaacctaattctccaacttctctaaattaatcctac-acttgttaaat-taatcatcagaatt 86468  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    | | | ||||| | ||||||||| |||||||||||||||||||    
86469 acaga-cttaataggattgaatgctagtctcacccttacctta 86510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 374
Target Start/End: Original strand, 2794 - 3019
Alignment:
146 atcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttc 245  Q
    |||| |||| |||||||||||||||||| ||||| ||||| || |||||| ||||| | |||||  ||||  ||||||  ||||||| ||||||| | ||    
2794 atcaacctatggattatctaaggtctgtgaacacattctacatcaattcttcaattctacatcaattaatcatcaatttctcacttt-aacctaactctc 2892  T
246 caattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
     |||| || |||||||| |||||| |||||||||| ||| ||||||||||| | | ||||| ||||||||||| |||||||||||||||||||| |||||    
2893 aaattatctaaaactaatcctaca-cttgttaaatttaatcatcagaattaaaga-cttaataagattgaatgctagtctcacccttaccttaagaaatc 2990  T
345 aaaaccggaagcctctcttggttctcttct 374  Q
     ||| | ||||||||||||||| |||||||    
2991 gaaatc-gaagcctctcttggtcctcttct 3019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 3888 - 3987
Alignment:
95 tacgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| || |||||    
3888 tacgaaaatgcatcaaatcacatggttctaagcttaaaactgattcaaaacatcaccctatggattatctaaggtctgtacacactttctacatcaattc 3987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 4012 - 4082
Alignment:
266 acaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||| ||||||||||||  |||| ||| |||  ||||||||||||| ||||||||||||||||||||||||    
4012 acaacatgttaaatctaattatcataatcatag-gcttaagaagattaaatgttagtctcacccttacctta 4082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 1876 - 2015
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||||||| | |||| |||||||| || ||||||||| ||||||| ||||| |||| | || |||||||||||||| ||| |||||| || |||||||||    
1876 aaaattcacccaatcccatggttctaaccttaaaactaattctaatcatcaacctatgaatcatctaaggtctgtacacagtttctacatcaattctaca 1975  T
199 attttccatcatctaattctcaattaatcacttttaacct 238  Q
    | |||||||||||||||  |||||| ||||||||||||||    
1976 agtttccatcatctaatcatcaatttatcacttttaacct 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 64; Significance: 7e-28; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 190 - 337
Target Start/End: Complemental strand, 160424 - 160278
Alignment:
190 aattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatca 289  Q
    ||||| |||| ||| |||||||||||  ||||||  ||||||||||||||||| | |||||||||| |||||| || |||| ||||||||||||  ||||    
160424 aattcaacaagttttcatcatctaatcatcaattcctcacttttaacctaattcttcaattctcaagactaaatctccaacatgttaaatctaattatca 160325  T
290 gaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||| || | ||||||||||| ||||||||||||| ||||||||||||    
160324 gaatcat-aggcttaagaagagtgaatgttagtcttacccttacctta 160278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 163666 - 163557
Alignment:
226 tcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctc 325  Q
    ||||||||||||||||| | ||||||||||||||||| || |||| | |||||| |||  |||||||| |||  ||||||||||||||||||||||||||    
163666 tcacttttaacctaattcttcaattctcaaaactaaatctccaacat-ttaaatttaattatcagaatcatag-gcttaagaagattgaatgttagtctc 163569  T
326 acccttacctta 337  Q
    ||| ||||||||    
163568 accgttacctta 163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 17174 - 17106
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||||||||  |||||||||||||||| || |||| |  |||||||| ||||||||||||||||||||    
17174 cttgttaaatacaaccatcagaattatatagattaatagaattgaatgctagtctcacccttaccttaa 17106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 372
Target Start/End: Original strand, 25811 - 26084
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| ||||   |||||||  |||||||| | ||||| || | |||| |||| ||||||||||||||||||||||| ||| || || |||       
25811 acgaaaattcacctaaagtcatggttttaagcttaacattgattttagatatcaacctatggattatctaaggtctgtaaacagtttttacatcaatcta 25910  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||||||| |||||  ||||   |||||  |||| |||||||||||| || ||||||| ||||| || ||||| ||||||||||| ||| ||||||||||    
25911 acaatttttcatcaattaatcaccaattcctcac-tttaacctaattctcaaattctctaaaaccaatcctac-acttgttaaatttaatcatcagaatt 26008  T
295 ataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctctt 372  Q
    |  | |||||| ||||||||||| |||||||||||||||||||  ||||| ||| | | ||||||||||||| |||||    
26009 a-caggcttaataagattgaatgctagtctcacccttaccttagaaaatcgaaatc-gcagcctctcttggtcctctt 26084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 151 - 337
Target Start/End: Original strand, 1307 - 1491
Alignment:
151 cctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaatt 250  Q
    |||||||| ||||||||||||||||||| |||||| || |||   |||||| | |||||  ||||  ||||||  ||||||| | |||||||| | | ||    
1307 cctacggactatctaaggtctgtaaacagtttctacatcaatctaacaattctacatcaattaatcatcaatttctcactttaaccctaatttccaactt 1406  T
251 ctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||| ||||||| |||||| ||||||||||  || ||||||||||||| | ||||| ||||||||||| |||||||||||||||||||    
1407 ctctaaactaatcctaca-cttgttaaattcaatcatcagaattataga-cttaataagattgaatgctagtctcacccttacctta 1491  T

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Target: scaffold0357 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 96 - 337
Target Start/End: Original strand, 13883 - 14124
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    ||||||||||| ||||||||||| ||  |||||||| | ||||||     |||| |||| ||||||||||||||||||||||| |||||| || |||       
13883 acgaaaattcacctaatcacatgattttaagcttaatattgattcctgtaatcatcctatggattatctaaggtctgtaaacagtttctacatcaatcta 13982  T
196 acaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctcaaaact-aaacctacaacttgttaaatctaaccatcagaatt 294  Q
    |||||| |  ||||  |||| |||||||  |||| || | ||||||| || ||||||| ||| | ||||||||| ||||||||||  |||||||||||||    
13983 acaattctatatcaattaatcctcaatttctcaccttaaccctaattctctaattctctaaaatcaaacctaca-cttgttaaatacaaccatcagaatt 14081  T
295 ataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||| || |||| |  |||||||| |||||||||||||||||||    
14082 atatagattaatagaattgaatgctagtctcacccttacctta 14124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 115 - 343
Target Start/End: Original strand, 4696 - 4923
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| | | |||| |||| ||||| ||||||||||||| ||| |||||| || |||   |||||||| |||||  |||    
4696 catggttttaagcttaacattgattccagatatcaacctatggattgtctaaggtctgtacacagtttctacatcaatctaacaatttttcatcaattaa 4795  T
215 ttctcaattaatcacttttaacctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  ||||||  ||||||| ||||||||| || ||||||||||| |||| |||||||| ||||||||  |||||||||||| ||| | ||||| |  ||||    
4796 tcatcaatttctcacttt-aacctaattctcaaattctcaaaaactaatcctacaacctgttaaatacaaccatcagaatcataga-cttaatagaattg 4893  T
314 aatgttagtctcacccttaccttaacaaat 343  Q
    |||| ||||| |||||||||||||| ||||    
4894 aatgctagtcccacccttaccttaagaaat 4923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 15396 - 15328
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||  |||||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
15396 acttgttaaatacaaccatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 15328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 245 - 341
Target Start/End: Original strand, 13010 - 13104
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    |||||||||||| |||||||| |||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||| |||||||||||||||||    
13010 ccaattctcaaa-ctaaacctccaacatgttaaatctaattatcagaatcatag-gcttaagaagattgaatgttagtcccacccttaccttaacaa 13104  T

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Target: scaffold0112 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 245 - 341
Target Start/End: Complemental strand, 23215 - 23120
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    ||||||| ||||| ||||||| |||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||| |||||||||||||||||    
23215 ccaattcccaaaattaaacctccaacatgttaaatctaattatcagaatcatag-gcttaagaagattgaatgttagtcacacccttaccttaacaa 23120  T

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Target: scaffold0877 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 344
Target Start/End: Complemental strand, 2119 - 2021
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    ||||||| ||||| |||||||  ||| ||||||||||||  |||||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||    
2119 ccaattcccaaaattaaacctcgaacatgttaaatctaattatcagaatcataa-gcttaagaagattgaatgttagtcccacccttaccttaataaatc 2021  T

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Target: scaffold0877; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 1411 - 1273
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| |||| ||||| |||| ||| || ||||||||||||||| |  |||  |||| |||||||||| |||||||| ||| |||||| || ||||| ||     
1411 aaaagtcatttaatctcatgtttctaaccttaaaactgattctgattatcttcctatggattatctatggtctgtacacagtttctacatcaattcaacg 1312  T
199 attttccatcatctaattctcaattaatcacttttaacc 237  Q
     ||||||||||||||||  ||||||  ||||||||||||    
1311 gttttccatcatctaatcatcaattcctcacttttaacc 1273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 8302 - 8389
Alignment:
192 ttctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaa 278  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||||||| || ||||||| |||||||||||| |||| |||||||    
8302 ttctacaagtttccatcatctaatcctcaattgatcacttttaacctaattctcaaattctcaaaaactaaaccttcaacatgttaaa 8389  T

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Target: scaffold0076 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 337
Target Start/End: Complemental strand, 22735 - 22499
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||||||| ||||||||||||||  |||||||| | ||||||     |||| | || |||||||||||||||| |||||| |||||| || |||   |||    
22735 aaaattcacctaatcacatggttttaagcttaacattgattcatgtaatcatcttatggattatctaaggtctataaacagtttctacatcaatctaaca 22636  T
199 attttccatcatctaattctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattata 297  Q
    | ||| |||||  ||||  ||||||  |||| |||||||||||| || ||||||| |||||||| ||||| |||||||||||  |||||||||||||| |    
22635 acttttcatcaattaatcatcaatttctcac-tttaacctaattctcaaattctctaaaactaaccctac-acttgttaaataaaaccatcagaattaca 22538  T
298 aagcttaagaagattgaatgttagtctcacccttacctta 337  Q
     | ||||| | ||||| ||| |||||||||||||||||||    
22537 ga-cttaataggattgcatgctagtctcacccttacctta 22499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 11000 - 10862
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||||||| | |||| |||||||| || ||||||||||||||||| || || |||| | ||||||||||||||||| ||| |||||| || ||||| |||    
11000 aaaattcacccaatctcatggttctaaccttaaaactgattctaatcaccatcctaggaattatctaaggtctgtacacaatttctacatcaattcaaca 10901  T
199 attttccatcatctaattctcaattaatcacttttaacc 237  Q
      |||||||||||||||  |||||| |  ||||||||||    
10900 ggtttccatcatctaatcatcaatttacaacttttaacc 10862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 1142 - 1050
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||||| ||||| ||||||| |||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
1142 ccaattcccaaaattaaacctccaacatgttaaatctaataatcagaatcatag-gcttaagaagattgaatgttagtcccacccttaccttaa 1050  T

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Target: scaffold0083 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 341
Target Start/End: Original strand, 42257 - 42351
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    |||||||||||| |||||| | |||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||| |||||||||||||||||    
42257 ccaattctcaaa-ctaaacgtccaacatgttaaatctaattatcagaatcatag-gcttaagaagattgaatgttagtcccacccttaccttaacaa 42351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 337
Target Start/End: Original strand, 39068 - 39289
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||||| |||||| | | ||||   || |||||||| |||| |||||||||||||| | || |||||||||||| | |||||  |||    
39068 catggttttaagcttaaaattgattccagatatcattatatggattatccaaggcctgtaaacactttccacatcaattctacaattatacatcaattaa 39167  T
215 ttctcaattaatcacttttaacctaattttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  ||||||  ||||||| | ||||||| || | || || ||||| || |||||| ||||||||||  |||||| ||||||| | | ||||| |||||||    
39168 tcatcaatttctcactttaaccctaattctcaacttttctaaaacaaatcctaca-cttgttaaatacaaccattagaattacaga-cttaataagattg 39265  T
314 aatgttagtctcacccttacctta 337  Q
    |||| |||||||||||||||||||    
39266 aatgctagtctcacccttacctta 39289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 96 - 344
Target Start/End: Original strand, 1991 - 2239
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattct 195  Q
    |||||||| |||||||   |||||||  |||||||| | |||||| | | |||| |||| |||||  |||||||||||| ||| |||||| || |||       
1991 acgaaaatccatctaagggcatggttttaagcttaacattgattccagatatcaacctaaggattgcctaaggtctgtacacagtttctacatcaatcta 2090  T
196 acaattttc-catcatctaattctcaattaatcacttttaacctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaat 293  Q
    ||||||||  |||||  ||||| ||||||  ||||||| ||||||||| || ||||||||||| |||| |||||||| ||||||||  |||||| |||||    
2091 acaattttttcatcaattaattatcaatttctcacttt-aacctaattctcaaattctcaaaaactaatcctacaacctgttaaatacaaccattagaat 2189  T
294 tataaagcttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
     ||| | ||||| |  |||||||| ||||| |||||||||||||| |||||    
2190 cataga-cttaatagaattgaatgctagtcccacccttaccttaagaaatc 2239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 344
Target Start/End: Original strand, 97778 - 98006
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| | | |||| |||| ||||| | ||||||||||| ||| || ||| || |||   |||||||| |||||  |||    
97778 catggttttaagcttaacattgattccagatatcatcctatggattgtgtaaggtctgtacacagttcctacatcaatctaacaatttttcatcaattaa 97877  T
215 ttctcaattaatcacttttaacctaattttccaattctcaaaactaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  |||||| |||||||| ||||||||| || ||||||||||| | || |||||||| ||||||||  |||||||||||| ||| | ||||| |  ||||    
97878 tcatcaatttatcacttt-aacctaattctcaaattctcaaaaattaatcctacaacctgttaaatacaaccatcagaatcataga-cttaatagaattg 97975  T
314 aatgttagtctcacccttaccttaacaaatc 344  Q
    |||||||||  |||||||||||||| |||||    
97976 aatgttagttccacccttaccttaagaaatc 98006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 344
Target Start/End: Original strand, 107056 - 107284
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||  |||||||| | |||||| | | |||| |||| ||||| | ||||||||||| ||| || ||| || |||   |||||||| |||||  |||    
107056 catggttttaagcttaacattgattccagatatcatcctatggattgtgtaaggtctgtacacagttcctacatcaatctaacaatttttcatcaattaa 107155  T
215 ttctcaattaatcacttttaacctaattttccaattctcaaaactaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattg 313  Q
    |  |||||| |||||||| ||||||||| || ||||||||||| | || |||||||| ||||||||  |||||||||||| ||| | ||||| |  ||||    
107156 tcatcaatttatcacttt-aacctaattctcaaattctcaaaaattaatcctacaacctgttaaatacaaccatcagaatcataga-cttaatagaattg 107253  T
314 aatgttagtctcacccttaccttaacaaatc 344  Q
    |||||||||  |||||||||||||| |||||    
107254 aatgttagttccacccttaccttaagaaatc 107284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 1041 - 1125
Alignment:
253 caaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    ||||| ||||||| |||| ||||||||||||  |||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
1041 caaaattaaacctccaacatgttaaatctaattatcagaatcatag-gcttaagaagattgaatgttagtcccacccttaccttaa 1125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 72392 - 72484
Alignment:
247 aattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaaca 340  Q
    ||||| ||||||||||||| |||| ||||||| ||||  ||||||||  ||  |||||||||||||||||||||||| ||||||||||||||||    
72392 aattcccaaaactaaacctccaacatgttaaacctaattatcagaatcgtag-gcttaagaagattgaatgttagtcccacccttaccttaaca 72484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 337
Target Start/End: Original strand, 1036 - 1126
Alignment:
245 ccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||| ||||||||  ||| ||||||||||||  || ||||| |||  ||||||||||||||||||||||||||||||||||||||    
1036 ccaattctcaaa-ctaaacctctaacatgttaaatctaattattagaatcatag-gcttaagaagattgaatgttagtctcacccttacctta 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 115 - 280
Target Start/End: Original strand, 30938 - 31104
Alignment:
115 catggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaa 214  Q
    |||||||| || ||||||||||||||||| ||||| | ||   || ||||||||| |||| ||| ||||||||| ||||| |||| ||||||||||||||    
30938 catggttctaaccttaaaactgattctaatcatcatcatatcaatcatctaaggtttgtacacagtttctatatcaattcaacaaatttccatcatctaa 31037  T
215 ttctcaattaatcacttttaa-cctaattttccaattctcaaaacta-aacctacaacttgttaaatc 280  Q
    |   ||||| |  |||||||| |||||||  | ||||| | |||||| ||||||||||||||||||||    
31038 tcaacaatttacaacttttaaccctaattcccaaattc-ccaaactacaacctacaacttgttaaatc 31104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 7528 - 7631
Alignment:
236 cctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacct 335  Q
    ||||||| || ||||||| |||| || |||||| |||||||||| ||| ||||||||||| | | ||||| |  ||||||||||||||||||||||||||    
7528 cctaattctcaaattctctaaaccaatcctaca-cttgttaaatttaatcatcagaattacaga-cttaatagaattgaatgttagtctcacccttacct 7625  T
336 taacaa 341  Q
    ||||||    
7626 taacaa 7631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 270
Target Start/End: Original strand, 3991 - 4151
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||||||| || |||| |||||||||||||||||| |||| | |||||||||||| |||| ||| |||||| || ||||| ||| ||||||  ||    
3991 aatcccatggttctaaccttagaactgattctaaacatcatcctatgaattatctaaggtttgtacacaatttctacatcaattcaacagttttcc-cca 4089  T
210 tctaattctcaattaatcacttttaa-cctaattttccaattctcaaaactaaacctacaac 270  Q
    ||||||  |||| |  |||||||||| ||||||| || ||| || |||| | ||||||||||    
4090 tctaatcatcaaatcctcacttttaaccctaattctcaaatcctaaaaattcaacctacaac 4151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 338
Target Start/End: Complemental strand, 33859 - 33668
Alignment:
146 atcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttc 245  Q
    |||| |||| ||||| ||||||||||||| ||| |||||| || |||   |||||||| |||||  ||||  ||||||  |||| |||||||||||| ||    
33859 atcaacctatggattgtctaaggtctgtacacagtttctacatcaatctaacaatttttcatcaattaatcatcaatttctcac-tttaacctaattctc 33761  T
246 caattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
     ||||||| |||||||| |||||||| ||||||||  ||||||| |||| ||| | ||||| |  |||||||| ||||| || |||||||||||    
33760 aaattctcaaaaactaatcctacaacctgttaaatacaaccatcggaatcataga-cttaatagaattgaatgctagtcccagccttaccttaa 33668  T

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Target: scaffold0130 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 973 - 905
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||  |||||||||||||||| || |||| || |||||||| |||||||||||||||||||    
973 acttgttaaatacaaccatcagaattatatagattaataaaattgaatgctagtctcacccttacctta 905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 55754 - 55870
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| |||||||||| ||| |||| || |||||||  ||||||||  |||| |||| |||||||||||||| |||| ||| |||||| || ||||| |||    
55754 aaaactcatctaatctcatagttctaaccttaaaatcgattctaattatcatcctatggattatctaaggtttgtacacaatttctacatcaattcaaca 55853  T
199 attttccatcatctaat 215  Q
      |||||||||||||||    
55854 tgtttccatcatctaat 55870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 337
Target Start/End: Original strand, 10699 - 10789
Alignment:
247 aattctcaaaactaaacctacaact-tgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||| ||| || ||||||||||  |||||||| ||| ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
10699 aattctaaaacctcaacctacaaccatgttaaatttaatcatcagaatta-acggcttaagaagattgaatgttagtcccacccttacctta 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 72564 - 72630
Alignment:
270 cttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||| ||| ||||||||||| | | ||||| |||||||||||||||||||||||||||||||    
72564 cttgttaaatttaatcatcagaattacaga-cttaataagattgaatgttagtctcacccttacctta 72630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 341
Target Start/End: Complemental strand, 13933 - 13748
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctca 254  Q
    ||||||||||||||||||||||| |||||| || |||   || ||| | |||||  |||| |||||||  || |||  | ||||||| ||||| |||||     
13933 ggattatctaaggtctgtaaacagtttctacatcaatctaaccattctacatcaattaatcctcaatttctctcttaaaccctaattctccaacttctct 13834  T
255 aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaacaa 341  Q
    ||   || |||||| |||| |||||  || ||||||||| ||| || |||| |  |||||||| |||||||||||||||||||||||    
13833 aattcaatcctaca-cttgctaaataaaatcatcagaatcatatagattaatagaattgaatgctagtctcacccttaccttaacaa 13748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 6772 - 6893
Alignment:
218 tcaattaatcacttttaacc-taattttccaattctcaaaa-ctaaa-cctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||| ||||||||||||||| ||||| || ||||||||||| ||||| |||||||| ||||||||| ||   |||||||||   | |||||||  |||||    
6772 tcaaataatcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaattaatga-cttaagattattga 6870  T
315 atgttagtctcacccttacctta 337  Q
    |||||||||||||||||||||||    
6871 atgttagtctcacccttacctta 6893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 7525 - 7630
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||||||||||| ||||||||  ||   ||||||| ||| | || ||||  |||||||||||||||||||||||||    
7525 cctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattctcagaatcataga-ctcaagattattgaatgttagtctcacccttacc 7623  T
335 ttaacaa 341  Q
    |||||||    
7624 ttaacaa 7630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 253
Target Start/End: Complemental strand, 7953 - 7828
Alignment:
127 cttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaat 226  Q
    ||||||||||||| ||||||||| |||||| ||  ||||||||||||| ||| ||| | ||  ||||| |||  ||||||||||||||| |||||||  |    
7953 cttaaaactgattttaaacatcatcctacgaatattctaaggtctgtacacaatttttgtaccaattcaacatgtttccatcatctaatcctcaatt-ct 7855  T
227 cacttttaacctaattttccaattctc 253  Q
    |||| ||||||  | ||||||||||||    
7854 cactcttaaccctaatttccaattctc 7828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 30587 - 30705
Alignment:
219 caattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatg 317  Q
    ||||| ||||||||||||  |||||| | |||||||||||||||||||||||| ||||||||  ||   ||||||||| ||  ||||  |  |||||| |    
30587 caatttatcacttttaactataatttccaaattctcaaaactaaacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaagg 30686  T
318 ttagtctcacccttacctt 336  Q
    |||||||||||||||||||    
30687 ttagtctcacccttacctt 30705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 337
Target Start/End: Complemental strand, 27025 - 26844
Alignment:
156 ggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatcacttttaacctaattttccaa-ttctca 254  Q
    ||||||||||||||||||||||| |||||| || |||   || ||| | | |||  |||| |||||||  ||||||  | ||||||| ||||| |||||     
27025 ggattatctaaggtctgtaaacagtttctacatcaatctaaccattctacgtcaattaatcctcaatttctcacttaaaccctaattctccaacttctct 26926  T
255 aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||  ||| | |||| ||||||||||  |||||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
26925 aatttaatcttaca-cttgttaaatacaaccatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 26844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 32157 - 32195
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||||||||||||||||||    
32157 gcttaagaagattgaatgttagtctcacccttaccttaa 32195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 82967 - 83048
Alignment:
255 aaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||| |||| ||||||||||||  || ||||| |||  ||||||||||||||||||||| || |||||||||||||    
82967 aaactaaacctccaacatgttaaatctaattattagaatcatag-gcttaagaagattgaatgttaatcccacccttacctta 83048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 96341 - 96394
Alignment:
228 acttttaacctaattttccaattctcaaaacta-aacctacaacttgttaaatc 280  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||||||||||    
96341 acttttaacctaattctccaatcctcaaaactacaacctacaacttgttaaatc 96394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 19337 - 19301
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctt 336  Q
    |||||||||||||||||||||||||||||||||||||    
19337 gcttaagaagattgaatgttagtctcacccttacctt 19301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 14318 - 14437
Alignment:
96 acgaaaattcatctaatcacatggttcaaagcttaaaactgatt-ctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattc 194  Q
    ||||||||||| ||| |||||||||| |||||| |||||| ||| ||  | |||| |||| ||||||||||||||||||||||| |||||| || |||      
14318 acgaaaattcacctattcacatggtttaaagctcaaaactaatttctgta-atcatcctatggattatctaaggtctgtaaacagtttctacatcaatct 14416  T
195 tacaattttccatcatctaat 215  Q
     |||||||| ||||| |||||    
14417 aacaatttttcatcaactaat 14437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 14127 - 13989
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| |||||||||| |||| ||| || |||||||||||||   |  ||||  ||| |||||||||||||| |||| ||| |||||| || |||||  |     
14127 aaaagtcatctaatctcatgtttctaaccttaaaactgatttcgattatcattctatggattatctaaggtatgtacacagtttctacattaattcatcg 14028  T
199 attttccatcatctaattctcaattaatcacttttaacc 237  Q
     ||||||||||||||||  ||||||  ||||||||||||    
14027 gttttccatcatctaatcatcaattcctcacttttaacc 13989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 12354 - 12216
Alignment:
99 aaaattcatctaatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctaca 198  Q
    |||| ||||| |||| |||| ||| || ||||||||||||| | |  |||| | || |||||||||||||| |||| ||| |||||| || ||||| ||     
12354 aaaagtcatccaatctcatgtttctaaccttaaaactgattttgattatcatcatatggattatctaaggtatgtacacagtttctacatcaattcaacg 12255  T
199 attttccatcatctaattctcaattaatcacttttaacc 237  Q
     || ||||||||| |||  ||||||| ||||||||||||    
12254 gttgtccatcatccaatcatcaattactcacttttaacc 12216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 337
Target Start/End: Original strand, 21578 - 21699
Alignment:
218 tcaattaatcacttttaa-cctaattttccaattctc-aaaact-aaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattga 314  Q
    |||||||||||||||||| ||||||| || ||||||| |||||| ||||||||||| ||||||||| ||   ||||||| | |   |||||||  |||||    
21578 tcaattaatcacttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattga 21676  T
315 atgttagtctcacccttacctta 337  Q
    ||||||||| |||||||||||||    
21677 atgttagtcccacccttacctta 21699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 18608 - 18646
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||| ||||||||||||||    
18608 gcttaagaagattgaatgttagtcccacccttaccttaa 18646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Complemental strand, 40256 - 40218
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||| ||||||||||||||    
40256 gcttaagaagattgaatgttagtcccacccttaccttaa 40218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 42686 - 42724
Alignment:
300 gcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||| ||||||||||||||    
42686 gcttaagaagattgaatgttagtcccacccttaccttaa 42724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 27910 - 28036
Alignment:
219 caattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatg 317  Q
    ||||| ||||||||||||| |||||| | ||| |||||||||||||||||||| ||||||||  ||   ||||||||| ||  ||||  |  |||||| |    
27910 caatttatcacttttaaccctaatttccaaatcctcaaaactaaacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaagg 28009  T
318 ttagtctcacccttaccttaacaaatc 344  Q
     ||||| |||||||||||||| |||||    
28010 ctagtcccacccttaccttaataaatc 28036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 10725 - 10833
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||||||||||  ||||||||  ||   ||||||| ||| | || ||||  |||||||||||||||||||||||||    
10725 cctaattctcaaattctcaaaaactaaacctacaatatgttaaatacaattttcagaatcataga-ctcaagattattgaatgttagtctcacccttacc 10823  T
335 ttaacaaatc 344  Q
    |||| |||||    
10824 ttaagaaatc 10833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 513 - 476
Alignment:
300 gcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||||||||||| |||||||||||||||||    
513 gcttaagaagattgaatgttcgtctcacccttacctta 476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 270
Target Start/End: Complemental strand, 2681 - 2537
Alignment:
128 ttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatcatctaattctcaattaatc 227  Q
    |||||| |||||| ||  |||| ||||  ||||||| || ||||||| ||| |||||| || ||||| ||| ||||| ||||||||||  ||||||  ||    
2681 ttaaaattgattccaattatcatcctatagattatcaaaagtctgtacacagtttctacatcaattcaacagttttctatcatctaatcatcaattcgtc 2582  T
228 acttttaa-cctaattttccaattct-caaaactaaacctacaac 270  Q
    |||||||| ||||||| || ||||||  |||||| ||||||||||    
2581 acttttaaccctaattctcaaattctaaaaaacttaacctacaac 2537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 12410 - 12446
Alignment:
301 cttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||||||||| |||||||||||||||||||    
12410 cttaagaagattgaatgctagtctcacccttacctta 12446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 13496 - 13564
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||||||  |||||||||||||||| |  |||| |  |||||||| |||||||||||||||||||    
13496 acttgttaaatacaaccatcagaattatataaattaatagaattgaatgctagtctcacccttacctta 13564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 7489 - 7549
Alignment:
219 caattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaat 279  Q
    ||||| ||||||||||||||||||  | ||| ||||||||||||| |||||| ||||||||    
7489 caatttatcacttttaacctaattcccaaatcctcaaaactaaacttacaacatgttaaat 7549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 337
Target Start/End: Complemental strand, 4782 - 4672
Alignment:
228 acttttaacctaattttccaattctc--aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctc 325  Q
    |||||||||||||||  |||||| |   |||||||| |||| |||||||||||  ||| ||||||||||||| | |||||||| |||| ||| || || |    
4782 acttttaacctaattccccaatttttcaaaaactaatcctagaacttgttaaagttaatcatcagaattataga-cttaagaaaattggatgctaatccc 4684  T
326 acccttacctta 337  Q
    ||||||||||||    
4683 acccttacctta 4672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 21913 - 22020
Alignment:
236 cctaattttccaattctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacc 334  Q
    ||||||| || ||||||||||| ||||||||||||| ||||||||  ||   ||| ||| ||| | || ||||  |||||||||||||||||||||||||    
21913 cctaattctcaaattctcaaaaactaaacctacaacatgttaaatacaattttcacaatcataga-ctcaagattattgaatgttagtctcacccttacc 22011  T
335 ttaacaaat 343  Q
    |||| ||||    
22012 ttaagaaat 22020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 30004 - 30065
Alignment:
219 caattaatcacttttaac-ctaattttccaattctcaaaactaaacctacaacttgttaaat 279  Q
    ||||| |||||||||||| ||||||  | ||| |||||||||||||||||||| ||||||||    
30004 caatttatcacttttaactctaattcccaaatcctcaaaactaaacctacaacatgttaaat 30065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 344
Target Start/End: Original strand, 2060 - 2103
Alignment:
301 cttaagaagattgaatgttagtctcacccttaccttaacaaatc 344  Q
    |||||||  ||||||||||||||||||||||||||||| |||||    
2060 cttaagattattgaatgttagtctcacccttaccttaagaaatc 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.000000009; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 135636 - 135526
Alignment:
226 tcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctc 325  Q
    ||||||| | |||||||| | | ||||| ||| ||| |||||| |||| |||||  |||||||||||||||| | ||||| |  |||||||| |||||||    
135636 tcactttaaccctaatttccaacttctctaaattaatcctaca-cttgctaaatacaaccatcagaattatacaacttaatagaattgaatgctagtctc 135538  T
326 acccttacctta 337  Q
    || |||||||||    
135537 actcttacctta 135526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 144344 - 144234
Alignment:
226 tcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctc 325  Q
    ||||||| | |||||||| | | ||||| ||| ||| |||||| |||| |||||  |||||||||||||||| | ||||| |  |||||||| |||||||    
144344 tcactttaaccctaatttccaacttctctaaattaatcctaca-cttgctaaatacaaccatcagaattatacaacttaatagaattgaatgctagtctc 144246  T
326 acccttacctta 337  Q
    || |||||||||    
144245 actcttacctta 144234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 344
Target Start/End: Original strand, 641 - 675
Alignment:
310 attgaatgttagtctcacccttaccttaacaaatc 344  Q
    ||||||||||||||||||||||||||||| |||||    
641 attgaatgttagtctcacccttaccttaagaaatc 675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 344
Target Start/End: Complemental strand, 10687 - 10653
Alignment:
310 attgaatgttagtctcacccttaccttaacaaatc 344  Q
    ||||||||||||||||||||||||||||| |||||    
10687 attgaatgttagtctcacccttaccttaagaaatc 10653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 7069 - 7107
Alignment:
310 attgaatgttagtctcacccttaccttaacaaatcaaaa 348  Q
    |||||| ||||| ||||||||||||||||||||||||||    
7069 attgaaagttagcctcacccttaccttaacaaatcaaaa 7107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 337
Target Start/End: Complemental strand, 1050 - 926
Alignment:
212 taattctcaattaatcacttttaacctaattttccaattctcaaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagat 311  Q
    |||| |||||||  ||||||| | |||||||| | | ||||| ||| ||| |||||| || |||||||  |||||||| ||||||| | ||||| |  ||    
1050 taatcctcaatttctcactttaaccctaatttccaacttctctaaattaatcctaca-ctcgttaaatacaaccatcataattatacaacttaatagaat 952  T
312 tgaatgttagtctcacccttacctta 337  Q
    |||||| ||||||| |||||||||||    
951 tgaatgctagtctcgcccttacctta 926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 4327 - 4380
Alignment:
228 acttttaacctaattttccaattctcaaaacta-aacctacaacttgttaaatc 280  Q
    ||||||||||||||| || ||| |||||||||| |||||||||| |||||||||    
4327 acttttaacctaattctcaaatcctcaaaactacaacctacaacatgttaaatc 4380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 12741 - 12680
Alignment:
219 caattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaat 279  Q
    ||||||||||||||||||| ||||   | ||| |||||||||||||||||||| ||||||||    
12741 caattaatcacttttaaccctaatccccaaatcctcaaaactaaacctacaacatgttaaat 12680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 11541 - 11436
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||||||| |  ||||||||||||||||| ||||| ||||   |||||||||| |||||| ||| |||||| || ||||| |||  ||| || ||    
11541 aatcccatggttctatccttaaaactgattctaatcatcatcctatacattatctaagatctgtacacagtttctacattaattcaacacgttttcacca 11442  T
210 tctaat 215  Q
    ||||||    
11441 tctaat 11436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 15941 - 15836
Alignment:
110 aatcacatggttcaaagcttaaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttctatataaattctacaattttccatca 209  Q
    |||| |||||||| |  ||||||||||||||||| ||||| ||||   |||||||||| |||||| ||| |||||| || ||||| |||  ||| || ||    
15941 aatcccatggttctatccttaaaactgattctaatcatcatcctatacattatctaagatctgtacacagtttctacattaattcaacacgttttcacca 15842  T
210 tctaat 215  Q
    ||||||    
15841 tctaat 15836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 2670 - 2707
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagc 127  Q
    |||||||||||||||||||||||| |||||||| ||||    
2670 ttttctacgaaaattcatctaatctcatggttctaagc 2707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 12399 - 12436
Alignment:
90 ttttctacgaaaattcatctaatcacatggttcaaagc 127  Q
    ||||||||||||| ||||||||||||||||||| ||||    
12399 ttttctacgaaaaatcatctaatcacatggttctaagc 12436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 29311 - 29407
Alignment:
241 ttttccaattctc-aaaactaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||| ||||||| ||||| || |||||| ||||||||||  || ||||||||||||| || |||| |  ||||||||||||||||| | ||||||||    
29311 ttttcaaattctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgttagtctcatcattacctta 29407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 378
Target Start/End: Complemental strand, 46119 - 46059
Alignment:
317 gttagtctcacccttaccttaacaaatcaaaaccggaagcctctcttggttctcttcttctc 378  Q
    ||||||||||||||||||||||||||||  | | || ||||||||||||||||  |||||||    
46119 gttagtctcacccttaccttaacaaatc-gatcgggcagcctctcttggttcttctcttctc 46059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 22031 - 22092
Alignment:
219 caattaatcacttttaac-ctaattttccaattctcaaaactaaacctacaacttgttaaat 279  Q
    ||||| |||||||||||| ||||||  | ||| |||||||||||||||||||| ||||||||    
22031 caatttatcacttttaactctaattcccaaatcctcaaaactaaacctacaacatgttaaat 22092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 120887 - 120948
Alignment:
219 caattaatcacttttaacc-taattttccaattctcaaaactaaacctacaacttgttaaat 279  Q
    ||||| ||||||||||||| |||||  | ||| |||||||||||||||||||| ||||||||    
120887 caatttatcacttttaaccctaattcacaaatcctcaaaactaaacctacaacatgttaaat 120948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 33361 - 33413
Alignment:
285 catcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
33361 catcagaattatataggttaatagaattgaatgctagtctcacccttacctta 33413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 464 - 550
Alignment:
251 ctcaaaacta-aacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttaccttaa 338  Q
    |||||||||| |||||||||| ||||||||| ||   ||||||||||| | |||||||  | |||||| ||||||||||||||||||||    
464 ctcaaaactataacctacaacatgttaaatccaatt-tcagaattataga-cttaagatcactgaatgatagtctcacccttaccttaa 550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 495 - 531
Alignment:
301 cttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||  ||||||||||||||||||||||||||||    
495 cttaagattattgaatgttagtctcacccttacctta 531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 10158 - 10194
Alignment:
301 cttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||  ||||||||||||||||||||||||||||    
10158 cttaagattattgaatgttagtctcacccttacctta 10194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 17297 - 17245
Alignment:
285 catcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
17297 catcagaattatatagattaatagaattgaatgctagtctcacccttacctta 17245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 33873 - 33837
Alignment:
301 cttaagaagattgaatgttagtctcacccttacctta 337  Q
    |||||||  ||||||||||||||||||||||||||||    
33873 cttaagattattgaatgttagtctcacccttacctta 33837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 46309 - 46242
Alignment:
269 acttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||| ||| ||||||||||| | | ||||| |  |||||||| |||||||||||||||||||    
46309 acttgttaaatttaatcatcagaattacaga-cttaatagaattgaatgctagtctcacccttacctta 46242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 24997 - 25053
Alignment:
129 taaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttcta 185  Q
    ||||||||||||||| ||||| |||| | |||||||||| |||||| ||| ||||||    
24997 taaaactgattctaatcatcatcctatgcattatctaagatctgtatacaatttcta 25053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 35867 - 35923
Alignment:
129 taaaactgattctaaacatcaccctacggattatctaaggtctgtaaacactttcta 185  Q
    ||||||||||||||| ||||| |||| | |||||||||| |||||| ||| ||||||    
35867 taaaactgattctaatcatcatcctatgcattatctaagatctgtatacaatttcta 35923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 50798 - 50746
Alignment:
285 catcagaattataaagcttaagaagattgaatgttagtctcacccttacctta 337  Q
    ||||||||||||| || |||| |  |||||||| |||||||||||||||||||    
50798 catcagaattatatagattaatacaattgaatgctagtctcacccttacctta 50746  T

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Target: scaffold0075; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 60837 - 60889
Alignment:
228 acttttaacctaattttccaattctcaaaacta-aacctacaacttgttaaat 279  Q
    ||||||||||||||| || ||| |||||||||| |||||||||| ||||||||    
60837 acttttaacctaattctcaaatcctcaaaactacaacctacaacatgttaaat 60889  T

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Target: scaffold0023 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 338
Target Start/End: Complemental strand, 16787 - 16759
Alignment:
310 attgaatgttagtctcacccttaccttaa 338  Q
    |||||||||||||||||||||||||||||    
16787 attgaatgttagtctcacccttaccttaa 16759  T

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