View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19836_high_25 (Length: 367)

Name: NF19836_high_25
Description: NF19836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19836_high_25
NF19836_high_25
[»] chr4 (53 HSPs)
chr4 (22-364)||(39049079-39049419)
chr4 (57-223)||(39054713-39054879)
chr4 (67-222)||(39236683-39236838)
chr4 (67-242)||(39291945-39292120)
chr4 (294-360)||(39113755-39113821)
chr4 (286-360)||(39533281-39533355)
chr4 (286-367)||(51392229-51392308)
chr4 (292-364)||(53184092-53184164)
chr4 (286-364)||(47750221-47750298)
chr4 (286-364)||(54356892-54356970)
chr4 (286-358)||(12158136-12158208)
chr4 (296-364)||(31848770-31848838)
chr4 (286-357)||(33523268-33523340)
chr4 (286-360)||(2215281-2215356)
chr4 (286-360)||(3533306-3533381)
chr4 (286-360)||(6290598-6290673)
chr4 (286-360)||(8991781-8991856)
chr4 (286-360)||(16020845-16020920)
chr4 (286-360)||(33604655-33604730)
chr4 (286-360)||(38173553-38173628)
chr4 (286-360)||(40721033-40721108)
chr4 (286-360)||(45081411-45081486)
chr4 (286-360)||(46917510-46917585)
chr4 (286-364)||(10089846-10089923)
chr4 (286-364)||(33526715-33526793)
chr4 (287-364)||(53348056-53348134)
chr4 (286-367)||(34564122-34564203)
chr4 (286-359)||(55408570-55408643)
chr4 (286-358)||(19409129-19409201)
chr4 (286-360)||(3618452-3618527)
chr4 (286-360)||(28899330-28899405)
chr4 (286-360)||(34199268-34199343)
chr4 (286-360)||(35809161-35809236)
chr4 (286-332)||(4981507-4981553)
chr4 (292-360)||(33077873-33077941)
chr4 (308-364)||(40596758-40596814)
chr4 (286-360)||(23540425-23540500)
chr4 (286-360)||(34464022-34464097)
chr4 (286-360)||(55560478-55560553)
chr4 (286-332)||(13094418-13094464)
chr4 (287-360)||(13110560-13110634)
chr4 (124-170)||(33453971-33454017)
chr4 (287-360)||(52017343-52017417)
chr4 (294-358)||(19272789-19272854)
chr4 (286-358)||(48506607-48506680)
chr4 (287-332)||(56054016-56054061)
chr4 (287-367)||(55909-55988)
chr4 (293-360)||(48403899-48403967)
chr4 (286-332)||(17329941-17329986)
chr4 (286-332)||(23389957-23390003)
chr4 (314-364)||(36656584-36656634)
chr4 (296-367)||(39418312-39418379)
chr4 (293-360)||(18469366-18469435)
[»] chr7 (29 HSPs)
chr7 (286-360)||(22737595-22737669)
chr7 (292-364)||(22191224-22191296)
chr7 (286-359)||(43571095-43571168)
chr7 (286-358)||(114488-114560)
chr7 (292-364)||(21654850-21654922)
chr7 (292-364)||(30630810-30630882)
chr7 (286-360)||(35029108-35029183)
chr7 (286-360)||(36518513-36518588)
chr7 (290-364)||(25038589-25038663)
chr7 (286-360)||(35193119-35193193)
chr7 (286-364)||(24793489-24793567)
chr7 (286-332)||(32130299-32130345)
chr7 (286-358)||(30566598-30566671)
chr7 (288-360)||(40302490-40302563)
chr7 (292-360)||(48984911-48984979)
chr7 (286-360)||(5813096-5813171)
chr7 (286-360)||(33078784-33078859)
chr7 (286-360)||(39769727-39769802)
chr7 (287-364)||(25218804-25218881)
chr7 (287-332)||(28318071-28318116)
chr7 (286-360)||(38970029-38970105)
chr7 (297-360)||(47159494-47159558)
chr7 (286-360)||(30720118-30720193)
chr7 (286-360)||(42881356-42881431)
chr7 (287-360)||(22656666-22656740)
chr7 (286-360)||(33508525-33508601)
chr7 (293-360)||(38351584-38351652)
chr7 (286-360)||(37887845-37887920)
chr7 (286-360)||(45549618-45549693)
[»] chr5 (41 HSPs)
chr5 (286-364)||(8176299-8176377)
chr5 (286-364)||(14278826-14278904)
chr5 (286-364)||(41263359-41263437)
chr5 (292-364)||(4577008-4577080)
chr5 (286-365)||(25032350-25032429)
chr5 (287-367)||(15972565-15972645)
chr5 (286-363)||(11954774-11954851)
chr5 (286-367)||(41152999-41153080)
chr5 (286-360)||(31013843-31013918)
chr5 (294-364)||(8681284-8681354)
chr5 (294-364)||(12912875-12912945)
chr5 (286-359)||(13479824-13479898)
chr5 (286-364)||(34529378-34529456)
chr5 (292-364)||(10569806-10569878)
chr5 (292-364)||(25652816-25652888)
chr5 (286-360)||(32976575-32976650)
chr5 (286-360)||(40888891-40888966)
chr5 (286-358)||(25670907-25670980)
chr5 (287-364)||(27407740-27407819)
chr5 (293-364)||(34918474-34918543)
chr5 (286-360)||(19241313-19241388)
chr5 (286-360)||(23089515-23089590)
chr5 (286-360)||(27942488-27942563)
chr5 (286-360)||(37882431-37882503)
chr5 (286-359)||(42807000-42807074)
chr5 (309-362)||(42608042-42608095)
chr5 (286-353)||(9274457-9274523)
chr5 (287-360)||(27407041-27407116)
chr5 (286-360)||(29619013-29619088)
chr5 (286-360)||(30648112-30648187)
chr5 (286-360)||(32363614-32363689)
chr5 (286-359)||(3454733-3454807)
chr5 (294-358)||(39238419-39238484)
chr5 (286-329)||(4219472-4219515)
chr5 (286-364)||(4938182-4938261)
chr5 (287-361)||(7651001-7651076)
chr5 (287-360)||(31008384-31008458)
chr5 (286-335)||(36609286-36609336)
chr5 (286-359)||(39008477-39008551)
chr5 (293-360)||(23649167-23649235)
chr5 (293-360)||(23809336-23809404)
[»] chr2 (34 HSPs)
chr2 (286-364)||(927888-927966)
chr2 (286-364)||(37245500-37245578)
chr2 (292-364)||(9074221-9074293)
chr2 (286-367)||(14152060-14152142)
chr2 (286-364)||(39434008-39434086)
chr2 (286-364)||(5146707-5146786)
chr2 (286-364)||(38901719-38901797)
chr2 (293-364)||(1987125-1987196)
chr2 (286-360)||(12855018-12855093)
chr2 (286-360)||(24997079-24997154)
chr2 (286-360)||(30822583-30822658)
chr2 (286-364)||(31192980-31193058)
chr2 (286-360)||(4296771-4296846)
chr2 (286-360)||(22351614-22351689)
chr2 (286-360)||(43021740-43021815)
chr2 (286-358)||(8852056-8852129)
chr2 (287-364)||(36855770-36855846)
chr2 (286-364)||(6362953-6363031)
chr2 (286-360)||(7588502-7588579)
chr2 (286-364)||(13151480-13151559)
chr2 (286-360)||(17485816-17485891)
chr2 (286-358)||(39490142-39490215)
chr2 (292-364)||(2780733-2780805)
chr2 (292-360)||(31174186-31174253)
chr2 (286-358)||(7763489-7763562)
chr2 (286-358)||(36209476-36209549)
chr2 (287-332)||(36526821-36526866)
chr2 (286-342)||(6333396-6333452)
chr2 (286-360)||(1073083-1073158)
chr2 (286-360)||(9117811-9117886)
chr2 (286-332)||(1308726-1308772)
chr2 (286-332)||(14382966-14383012)
chr2 (286-332)||(17929284-17929330)
chr2 (287-360)||(44279992-44280066)
[»] chr1 (40 HSPs)
chr1 (286-364)||(17783372-17783450)
chr1 (292-364)||(44451266-44451338)
chr1 (292-364)||(44651074-44651146)
chr1 (286-360)||(31468128-31468203)
chr1 (286-360)||(45239133-45239208)
chr1 (286-360)||(51494471-51494546)
chr1 (286-364)||(44334284-44334362)
chr1 (286-364)||(44929286-44929364)
chr1 (292-364)||(643818-643890)
chr1 (292-364)||(3755024-3755096)
chr1 (286-364)||(8464094-8464172)
chr1 (286-359)||(29523698-29523772)
chr1 (286-360)||(8468319-8468394)
chr1 (286-360)||(30878543-30878618)
chr1 (286-364)||(41542325-41542401)
chr1 (286-360)||(45456150-45456225)
chr1 (286-360)||(48388107-48388182)
chr1 (286-360)||(48404325-48404400)
chr1 (286-359)||(27630460-27630534)
chr1 (286-359)||(37420344-37420418)
chr1 (287-360)||(37646559-37646633)
chr1 (295-364)||(52933764-52933833)
chr1 (295-364)||(52941399-52941468)
chr1 (286-358)||(20584853-20584925)
chr1 (286-360)||(2478327-2478402)
chr1 (286-360)||(19578909-19578984)
chr1 (287-359)||(33164408-33164481)
chr1 (293-360)||(37691289-37691357)
chr1 (286-360)||(14096686-14096761)
chr1 (286-360)||(23092764-23092839)
chr1 (294-360)||(31159390-31159457)
chr1 (286-360)||(35847120-35847195)
chr1 (287-364)||(40500396-40500472)
chr1 (287-360)||(37822565-37822640)
chr1 (286-358)||(39149071-39149143)
chr1 (316-364)||(48729347-48729395)
chr1 (286-360)||(36230352-36230427)
chr1 (286-364)||(36302977-36303055)
chr1 (294-358)||(45623531-45623596)
chr1 (296-359)||(47300497-47300561)
[»] chr8 (39 HSPs)
chr8 (286-367)||(26749401-26749482)
chr8 (292-364)||(5212294-5212366)
chr8 (288-364)||(18029495-18029571)
chr8 (286-364)||(36912414-36912492)
chr8 (292-364)||(34955662-34955734)
chr8 (293-364)||(8609977-8610048)
chr8 (286-364)||(17741709-17741787)
chr8 (286-364)||(26632149-26632227)
chr8 (286-360)||(41477180-41477254)
chr8 (296-367)||(30470811-30470882)
chr8 (286-361)||(38584893-38584968)
chr8 (286-364)||(39811054-39811133)
chr8 (286-360)||(43525088-43525163)
chr8 (286-358)||(4625496-4625568)
chr8 (292-364)||(42860717-42860789)
chr8 (286-360)||(1958179-1958254)
chr8 (286-360)||(35099432-35099507)
chr8 (286-360)||(43618348-43618423)
chr8 (286-360)||(45101024-45101099)
chr8 (294-364)||(13814952-13815022)
chr8 (286-359)||(42859922-42859996)
chr8 (287-367)||(29637148-29637228)
chr8 (286-360)||(15053629-15053704)
chr8 (286-360)||(31129502-31129577)
chr8 (286-360)||(43524390-43524465)
chr8 (286-364)||(7990428-7990506)
chr8 (292-364)||(5735290-5735362)
chr8 (296-364)||(30289726-30289794)
chr8 (286-330)||(44149867-44149911)
chr8 (294-356)||(30532453-30532516)
chr8 (286-360)||(40283472-40283547)
chr8 (292-354)||(23353189-23353251)
chr8 (293-360)||(26244501-26244569)
chr8 (286-360)||(12272481-12272556)
chr8 (286-360)||(13947363-13947438)
chr8 (286-360)||(35931859-35931934)
chr8 (296-332)||(7511885-7511921)
chr8 (286-326)||(29731692-29731732)
chr8 (288-332)||(44503166-44503210)
[»] chr3 (57 HSPs)
chr3 (286-360)||(42601760-42601834)
chr3 (286-364)||(46572921-46572999)
chr3 (292-364)||(42601501-42601573)
chr3 (293-364)||(41890540-41890611)
chr3 (286-364)||(25450630-25450708)
chr3 (286-364)||(37410415-37410493)
chr3 (292-364)||(33934996-33935068)
chr3 (292-364)||(49357493-49357565)
chr3 (292-360)||(49823170-49823238)
chr3 (292-360)||(51427105-51427173)
chr3 (286-360)||(28410393-28410467)
chr3 (294-360)||(49147288-49147354)
chr3 (286-364)||(50033666-50033744)
chr3 (292-361)||(25832723-25832792)
chr3 (286-359)||(35853193-35853266)
chr3 (286-359)||(43022647-43022720)
chr3 (286-359)||(49710390-49710463)
chr3 (286-360)||(15493822-15493894)
chr3 (286-360)||(25790774-25790849)
chr3 (286-360)||(33748684-33748758)
chr3 (286-364)||(35424005-35424083)
chr3 (292-362)||(50017058-50017128)
chr3 (286-361)||(29701681-29701757)
chr3 (286-364)||(138974-139053)
chr3 (286-360)||(6048695-6048770)
chr3 (286-360)||(17466514-17466589)
chr3 (286-360)||(30418428-30418503)
chr3 (286-367)||(33795488-33795566)
chr3 (286-360)||(47144172-47144247)
chr3 (286-359)||(5845140-5845214)
chr3 (286-332)||(42560900-42560946)
chr3 (286-358)||(6832383-6832456)
chr3 (286-358)||(51999238-51999311)
chr3 (290-360)||(20139363-20139434)
chr3 (286-360)||(32120437-32120512)
chr3 (286-360)||(41183273-41183348)
chr3 (286-360)||(43473889-43473964)
chr3 (286-360)||(44084308-44084383)
chr3 (286-364)||(47701058-47701137)
chr3 (286-360)||(50415829-50415904)
chr3 (286-336)||(10426455-10426505)
chr3 (286-332)||(12974667-12974713)
chr3 (286-367)||(49407330-49407411)
chr3 (286-367)||(42258316-42258407)
chr3 (296-359)||(52000062-52000126)
chr3 (286-353)||(7521144-7521211)
chr3 (286-360)||(26165553-26165628)
chr3 (286-360)||(36178703-36178778)
chr3 (286-360)||(46123925-46124000)
chr3 (286-332)||(4045979-4046025)
chr3 (286-330)||(49028573-49028617)
chr3 (286-360)||(11908018-11908093)
chr3 (286-360)||(27847408-27847483)
chr3 (286-352)||(37183844-37183911)
chr3 (296-359)||(50176086-50176149)
chr3 (286-332)||(7008054-7008100)
chr3 (286-332)||(35472654-35472700)
[»] chr6 (16 HSPs)
chr6 (286-364)||(29428514-29428592)
chr6 (292-364)||(6380485-6380557)
chr6 (286-360)||(24348430-24348505)
chr6 (286-364)||(32359743-32359821)
chr6 (286-359)||(6725626-6725699)
chr6 (286-360)||(631515-631590)
chr6 (286-352)||(22627833-22627899)
chr6 (286-360)||(8660556-8660631)
chr6 (286-359)||(34328278-34328352)
chr6 (286-360)||(34838578-34838653)
chr6 (289-360)||(12501832-12501904)
chr6 (286-360)||(10883869-10883944)
chr6 (286-360)||(17961263-17961338)
chr6 (286-360)||(30446241-30446316)
chr6 (286-359)||(197801-197875)
chr6 (287-360)||(12512911-12512985)
[»] scaffold0362 (1 HSPs)
scaffold0362 (286-360)||(5322-5397)
[»] scaffold0054 (1 HSPs)
scaffold0054 (286-360)||(57742-57817)
[»] scaffold0012 (1 HSPs)
scaffold0012 (286-360)||(124013-124085)
[»] scaffold0100 (1 HSPs)
scaffold0100 (286-364)||(30534-30612)
[»] scaffold0016 (1 HSPs)
scaffold0016 (287-360)||(66071-66145)


Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 22 - 364
Target Start/End: Complemental strand, 39049419 - 39049079
Alignment:
Q  22 taacacacaacacaatgcaattaaaaacttcatccattatataatataagttggagctttacctttccatcagaaggaagagcaagagcagtggtgagta 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39049419 taacacacaacacaatgcaattaaaaacttcatccattatataatataagttggagctttacctttccatcagaaggaagagcaagagcagtggtgagta 39049320  T
Q  122 gagagtagccagtgtagacaccaatttccaacgtgttctttgcattgatgagcttgatcaacatgcttataagttgtccttcatcagcgggtgtagccat 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39049319 gagagtagccagtgtagacaccaatttccaacgtgttctttgcattgatgagcttgatcaacatgcttataagttgtccttcatcagcgggtgtagccat 39049220  T
Q  222 aatttttctgttttacaacattgatc-gtttatattagaccatctacaatgggnnnnnnnnnnnncaacacccacttttttaattcccaacattccacat 320  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||              ||||| |||||||||||||| |||||| |||||||    
T  39049219 aatttttctgttttacaacattgatctgtttatattagaccatctacaatg---attttttctttcaacatccacttttttaatttccaacactccacat 39049123  T
Q  321 cattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||||| | |||||||||||||||||||||||||||||||    
T  39049122 cattttctctttcttattcaacattcattcaacttttaccctct 39049079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 57 - 223
Target Start/End: Complemental strand, 39054879 - 39054713
Alignment:
Q  57 attatataatataagttggagctttacctttccatcagaaggaagagcaagagcagtggtgagtagagagtagccagtgtagacaccaatttccaacgtg 156  Q
    |||||||  |||||| | |||| |||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||  |||    
T  39054879 attatattttataaggtcgagccttacctttccatcagaaggaagagcaagagcagtggagagaagagagtaaccagtgtagacaccaatttccattgtg 39054780  T
Q  157 ttctttgcattgatgagcttgatcaacatgcttataagttgtccttcatcagcgggtgtagccataa 223  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||    
T  39054779 ttctttgcattgatgagcttaatcaacatccttataagttgtccttcatcagcaggtgtggccataa 39054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 39236838 - 39236683
Alignment:
Q  67 ataagttggagctttacctttccatcagaaggaagagcaagagcagtggtgagtagagagtagccagtgtagacaccaatttccaacgtgttctttgcat 166  Q
    ||||| |||||| |||||||||||||||| ||||||||||| ||||||| ||| |||||||| |||||||| ||||||||||| ||||||||||||||||    
T  39236838 ataaggtggagccttacctttccatcagagggaagagcaagggcagtggagagcagagagtaaccagtgtacacaccaatttctaacgtgttctttgcat 39236739  T
Q  167 tgatgagcttgatcaacatgcttataagttgtccttcatcagcgggtgtagccata 222  Q
    |||| ||||| | |||||||||||||||||||||||||||| ||||| ||||||||    
T  39236738 tgataagcttaaccaacatgcttataagttgtccttcatcaccgggtatagccata 39236683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 67 - 242
Target Start/End: Original strand, 39291945 - 39292120
Alignment:
Q  67 ataagttggagctttacctttccatcagaaggaagagcaagagcagtggtgagtagagagtagccagtgtagacaccaatttccaacgtgttctttgcat 166  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||| || |||||||||||||||||||  |||||||||||||    
T  39291945 ataaggtggagctttacctttccatcagagggaagagcaagagcagtggagagcaaagagtaacctgtgtagacaccaatttccattgtgttctttgcat 39292044  T
Q  167 tgatgagcttgatcaacatgcttataagttgtccttcatcagcgggtgtagccataatttttctgttttacaacat 242  Q
    |||||||||| || | |||| | ||||| || ||||||||| ||||||||||||| || |  ||||||||||||||    
T  39292045 tgatgagcttaattagcatgttgataagctggccttcatcaccgggtgtagccatcatatacctgttttacaacat 39292120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 39113821 - 39113755
Alignment:
Q  294 acttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  39113821 actttttcaattcccaacactccacatcattttctctcttttattcaacactcattcaacttttacc 39113755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 39533355 - 39533281
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| |||| |||| ||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  39533355 caacacccactttttcaatttccaatattccacgtcattttctctttcttattcaacattcattcaacttttacc 39533281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 51392229 - 51392308
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    |||||| |||||||||||||| ||||| ||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||    
T  51392229 caacacacacttttttaattctcaacactccacatcattttttctc--ttattcaacattcgttcaacttttaccctcttca 51392308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 53184164 - 53184092
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| | ||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  53184164 ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaactttaaccctct 53184092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 47750298 - 47750221
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| |||||||| || ||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  47750298 caacatccactttttcaattccca-cactccacgtcattttctctctcttattcaacactcattcaacttttaccctct 47750221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 54356970 - 54356892
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||  |||||||||||||| ||||    
T  54356970 caacatccactttttcaattcccaacactccacatcattttctttctcttattcaacacacattcaacttttactctct 54356892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 12158136 - 12158208
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaactttta 358  Q
    ||||| |||| ||||  |||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||    
T  12158136 caacatccacattttcgattcccaacactccacatcattttctctctcttattcaacactcattcaactttta 12158208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 31848838 - 31848770
Alignment:
Q  296 ttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| |||| |||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  31848838 tttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctct 31848770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 33523268 - 33523340
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttt 357  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||||    
T  33523268 caacatccactttttcaattcccaacattccacatcattttctctctcttaattcaacatccattcaattttt 33523340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 2215356 - 2215281
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||||| |||||||| |||||||    
T  2215356 caacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaatttttacc 2215281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 3533381 - 3533306
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  3533381 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 3533306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 6290598 - 6290673
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  6290598 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 6290673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 8991781 - 8991856
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  8991781 caacacccactttttgaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 8991856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 16020845 - 16020920
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||| || ||||||||| ||||||| |||||||    
T  16020845 caacacccactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaatttttacc 16020920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 33604655 - 33604730
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| | || |||||||| |||||||| |||||||    
T  33604655 caacacccactttttcaattcccaacactccacatcattttctctatcttaattcaacactcattcaatttttacc 33604730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 38173553 - 38173628
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||| ||| |||||||    
T  38173553 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatccaatttttacc 38173628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 40721033 - 40721108
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  40721033 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 40721108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 45081486 - 45081411
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||  | |||||||| |||||||| |||||||    
T  45081486 caacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacc 45081411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 46917585 - 46917510
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  46917585 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 46917510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 10089846 - 10089923
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||| ||||  ||| | ||||||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  10089846 caacacccactttttcaattttcaatactccacatcatttt-tctctcttattcaacactcattcaacttttaccctct 10089923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 33526715 - 33526793
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| ||||| ||||| |||  |||||||||| |||||||||||| | ||||||||||||||||||||    
T  33526715 caacatccactttttcaattctcaacactccgtatcattttctttcttttattcaatactcattcaacttttaccctct 33526793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 53348134 - 53348056
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctct 364  Q
    |||| ||||||||| ||||  ||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  53348134 aacatccactttttcaattatcaacatttcacatcattttctctctctttattcaacagtcatttaacttttaccctct 53348056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 34564122 - 34564203
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    ||||| ||| ||||||||||| ||||| |  | || ||||||||||| |||||||||||||||| |||||||||||||||||    
T  34564122 caacatccatttttttaattctcaacactttatattattttctctctcttattcaacattcatttaacttttaccctcttca 34564203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 55408643 - 55408570
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttac 359  Q
    |||||| ||||||||   |||||| || ||||||||||||||||||| |||||||||| |||||||||||||||    
T  55408643 caacactcactttttctcttcccagcactccacatcattttctctctcttattcaacactcattcaacttttac 55408570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 19409129 - 19409201
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaactttta 358  Q
    ||||||||||||||| |||| |||| | || |||| ||||||||||| |||||||| ||||||||||||||||    
T  19409129 caacacccactttttcaatttccaaaactcaacattattttctctctcttattcaatattcattcaactttta 19409201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 3618527 - 3618452
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  | ||||| |||||||    
T  3618527 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacc 3618452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 28899330 - 28899405
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||||| || ||||||||  ||||||| |||||||    
T  28899330 caacacccactttttcaattcccaatattccacatcgttttctctctcttaattcaacacccattcaatttttacc 28899405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 34199343 - 34199268
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  34199343 caacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 34199268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 35809161 - 35809236
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||  | ||||||||  ||||||| |||||||    
T  35809161 caacatccactttttcaattcccaacattccacatcattttctctctcataattcaacacccattcaatttttacc 35809236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 4981507 - 4981553
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  4981507 caacacccactttttcaattcccaacactccacatcattttctctct 4981553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 33077941 - 33077873
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||||| |||| |||||| ||||||||||||||||||||| ||| ||||  ||||||| |||||||    
T  33077941 ccactttttcaatttccaacactccacatcattttctctctttaatttaacacccattcaatttttacc 33077873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 40596814 - 40596758
Alignment:
Q  308 caacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||| |||||||||||||||||||||||| | ||||||||||||| ||||    
T  40596814 caacactccacgtcattttctctcttttattcaacacttattcaacttttactctct 40596758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 23540500 - 23540425
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| |||| |||||| || |||||||||||||||| || ||||||||  ||||||| |||||||    
T  23540500 caacacccactttttcaatttccaacactcaacatcattttctctctcttaattcaacacccattcaatttttacc 23540425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 34464097 - 34464022
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| |||||||||||| |||||||| ||||||||||||||||| || ||||||||  | ||||| |||||||    
T  34464097 caacaccaacttttttaatttccaacatttcacatcattttctctctcttaattcaacaccctttcaatttttacc 34464022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 55560553 - 55560478
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| || ||||||||   |||||| |||||||    
T  55560553 caacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacctattcaatttttacc 55560478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 13094464 - 13094418
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  13094464 caacacccattttttcaattcccaacactccacatcattttctctct 13094418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 13110560 - 13110634
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||||||||| ||||||||||| |||||| |||||| ||||| || ||||||||  ||||||| |||||||    
T  13110560 aacacccactttttcaattcccaacactccacaacattttttctctcttaattcaacacccattcaatttttacc 13110634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 33453971 - 33454017
Alignment:
Q  124 gagtagccagtgtagacaccaatttccaacgtgttctttgcattgat 170  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||    
T  33453971 gagtagccagtgtagacaccaatttccatggtgttcttagcattgat 33454017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 52017343 - 52017417
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||| ||||||| |||||| |||| || |||||||||||||||| || |||||||| |||||||| |||||||    
T  52017343 aacacctactttttcaattcctaacactcaacatcattttctctctcttaattcaacactcattcaatttttacc 52017417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 19272789 - 19272854
Alignment:
Q  294 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||||| ||||||||||| |||||||||||||||||||  | ||||||||| ||||||| |||||    
T  19272789 actttttcaattcccaacactccacatcattttctctctcataattcaacatccattcaattttta 19272854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 48506680 - 48506607
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||| ||||||||| ||||  ||||| ||||||||||||||||||| || |||||||| |||||||| |||||    
T  48506680 caacatccactttttcaattttcaacactccacatcattttctctctcttaattcaacactcattcaattttta 48506607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 56054016 - 56054061
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||    
T  56054016 aacatccactttttcaattcccaacactccacatcattttctctct 56054061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 55988 - 55909
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    ||||| |||||||| |||| |||||| ||| ||||||||||| ||| ||||||||| |||||| |||||||| | ||||||    
T  55988 aacactcactttttcaatttccaacactccgcatcattttctttctcttattcaactttcatt-aacttttatcatcttca 55909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 48403967 - 48403899
Alignment:
Q  293 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||| |||| |||||| |||||||||||||||||||  | |||||||| |||||||| |||||||    
T  48403967 cactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaatttttacc 48403899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 17329986 - 17329941
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  17329986 caacatccactttttcaattcc-aacattccacatcattttctctct 17329941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 23390003 - 23389957
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    |||||| |||||||| ||||||||||| ||||||| |||||||||||    
T  23390003 caacactcactttttcaattcccaacactccacattattttctctct 23389957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 36656584 - 36656634
Alignment:
Q  314 tccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||||||| ||| |||| | ||||||||||||||| ||||    
T  36656584 tccacatcattttctctctcttaatcaatactcattcaacttttacactct 36656634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 367
Target Start/End: Complemental strand, 39418379 - 39418312
Alignment:
Q  296 ttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    ||||| ||||| |||||||||||||    |||||||||||||| |||||| |||||| |||||| |||||||    
T  39418379 tttttcaattctcaacattccacat----ttctctcttttatttaacatttattcaatttttactctcttca 39418312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 18469435 - 18469366
Alignment:
Q  293 cacttttttaattcccaacattccacatca-ttttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||| ||||||||||| ||||||||| |||| ||||| || ||||||||| ||||||| |||||||    
T  18469435 cactttttcaattcccaacactccacatcatttttttctctcttaattcaacatccattcaatttttacc 18469366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 22737669 - 22737595
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  22737669 caacacccactttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaacttttacc 22737595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 22191224 - 22191296
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| |||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  22191224 ccactttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 22191296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 43571168 - 43571095
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttac 359  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  43571168 caacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 43571095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 114488 - 114560
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaactttta 358  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||||| ||||| ||||||||    
T  114488 caacacccactttttaaattctcaacactccacatcattttctctctcttattcaacactcatttaactttta 114560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 21654850 - 21654922
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| |||| |||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  21654850 ccactttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctct 21654922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 30630882 - 30630810
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||||||| | ||||||||||||||| ||||    
T  30630882 ccacttttttaattcccaacactccacattattttctctctcttattcaatactcattcaacttttactctct 30630810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 35029183 - 35029108
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||    
T  35029183 caacacctactttttcaattcccaacattccacatcattttctctctcttaattcaacactcattcaatttttacc 35029108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 36518513 - 36518588
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| |||||||    
T  36518513 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacc 36518588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 25038663 - 25038589
Alignment:
Q  290 acccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||||||||||||||| || | ||||||||||||||||| |||||| ||| |||||||| |||||||||||    
T  25038663 acccacttttttaattcccagcacttcacatcattttctctctcttattcgacactcattcaagttttaccctct 25038589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 35193193 - 35193119
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    |||||| |||||||| ||||||||||| ||||||| ||||||| ||| |||||||||| ||||||||||||||||    
T  35193193 caacactcactttttcaattcccaacactccacataattttctttctattattcaacactcattcaacttttacc 35193119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 24793489 - 24793567
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||| |||||| || |||||||| |||| |||||||||||| | |||||||||| ||||||||||||||| ||||    
T  24793489 caacaccccctttttcaagtcccaacactccaaatcattttctctttcttattcaacactcattcaacttttacactct 24793567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 32130345 - 32130299
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  32130345 caacacccacttttttaattcccaacactccacatcattttctctct 32130299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 30566598 - 30566671
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| || |||||||| |||||||| |||||    
T  30566598 caacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacactcattcaattttta 30566671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 40302563 - 40302490
Alignment:
Q  288 acacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| |||||||    
T  40302563 acacccattttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacc 40302490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 48984911 - 48984979
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||||| |||| |||||  ||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  48984911 ccactttttcaatttccaacgctccacatcattttctctctcttattcaacactcattcaacatttacc 48984979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 5813096 - 5813171
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||||| || |||||||| | |||||| |||||||    
T  5813096 caacacccactttttcaattcccaacactgcacatcattttctctctcttaattcaacacttattcaatttttacc 5813171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 33078859 - 33078784
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| ||||| | ||||||||||| || ||||||||||||||||| |||||||    
T  33078859 caacatccactttttcaattcccaacactccacgttattttctctctcttaattcaacattcattcaatttttacc 33078784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 39769727 - 39769802
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||  | |||||||| |||||||| |||||||    
T  39769727 caacacccactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaatttttacc 39769802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 25218881 - 25218804
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||| ||||||||| |||| |||||| | || |||||||||||||| |||||||| | ||||| ||||||||||||||    
T  25218881 aacatccactttttcaatttccaacacttcatatcattttctctctcttattcaatactcatttaacttttaccctct 25218804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 28318116 - 28318071
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||    
T  28318116 aacatccacttttttaattcccaacactccacatcattttctctct 28318071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 38970029 - 38970105
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctct--cttttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| |||| |||||| ||||||||||||| | |  || |||||||||| ||||||||||||||||    
T  38970029 caacacccactttttcaatttccaacactccacatcatttttttttcctcttattcaacactcattcaacttttacc 38970105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 47159558 - 47159494
Alignment:
Q  297 tttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  47159558 tttttaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 47159494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 30720118 - 30720193
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||| |||| |||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  30720118 caacacctactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 30720193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 42881356 - 42881431
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| || ||||||||   |||||| |||||||    
T  42881356 caacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccaattcaatttttacc 42881431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 22656666 - 22656740
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttacc 360  Q
    |||| ||| |||||||||||| ||||  ||||||||||||||||||||| ||||||||| |||| || |||||||    
T  22656666 aacatccatttttttaattcctaacacgccacatcattttctctcttttaattcaacatccatttaatttttacc 22656740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 33508601 - 33508525
Alignment:
Q  286 caacacccactttttt-aattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||| |||||| ||||||||||| || || ||||||||||||| || |||||||| |||||||| |||||||    
T  33508601 caacacccatttttttcaattcccaacactctacgtcattttctctctcttaattcaacactcattcaatttttacc 33508525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 38351584 - 38351652
Alignment:
Q  293 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||| |||||| ||||||||||||||||| |  | |||||||||||||| || |||||||    
T  38351584 cacttttttaatttccaacactccacatcattttctctttcataattcaacattcatttaatttttacc 38351652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 37887845 - 37887920
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||| ||||| ||||||||||| ||||||||||||| ||||| || ||||||||| |||| || |||||||    
T  37887845 caacatccattttttcaattcccaacactccacatcattttatctctcttaattcaacatccatttaatttttacc 37887920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 45549693 - 45549618
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| ||||||||||||| |||||  | ||||||||  ||||||| |||||||    
T  45549693 caacaaccactttttcaattcccaacactccacatcattttttctctcataattcaacacccattcaatttttacc 45549618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 8176377 - 8176299
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  8176377 caacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 8176299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 14278826 - 14278904
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14278826 caacacccattttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaacttttaccctct 14278904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 41263359 - 41263437
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41263359 caacatccactttttcaattcccaacgctccacatcattttctctctcttattcaacattcattcaacttttaccctct 41263437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 4577008 - 4577080
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4577008 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 4577080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 25032350 - 25032429
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctctt 365  Q
    |||||||||| |||| |||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  25032350 caacacccaccttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctt 25032429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 287 - 367
Target Start/End: Original strand, 15972565 - 15972645
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    |||| ||||||||| |||| |||||| || |||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  15972565 aacatccactttttcaatttccaacaatcgacattattttctctctcttattcaacattcattcaacttttaccctcttca 15972645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 363
Target Start/End: Original strand, 11954774 - 11954851
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctc 363  Q
    ||||||| |||||| |||||  ||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  11954774 caacacctacttttctaattatcaacactccacatcattttctctctcttattcaacattcattcaacttttatcctc 11954851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 41153080 - 41152999
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    ||||| ||| ||||| ||||| ||||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||||||    
T  41153080 caacatccattttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttaccttcttca 41152999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 31013918 - 31013843
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| |||||||    
T  31013918 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacc 31013843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 8681354 - 8681284
Alignment:
Q  294 acttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||| |||| |||||| |||| |||||||||||| | |||||||||||||||||||||||||||||||    
T  8681354 actttttcaatttccaacactccatatcattttctctttcttattcaacattcattcaacttttaccctct 8681284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 12912875 - 12912945
Alignment:
Q  294 acttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||||||||| |||| ||||||||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  12912875 acttttttaattcctaacactccacatcattttatctctcttatttaacactcattcaacttttaccctct 12912945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 13479898 - 13479824
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||| |||||||| ||||||    
T  13479898 caacacccacttttttaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttac 13479824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 34529456 - 34529378
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||| ||||||||||||| |||||   ||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  34529456 caacacctacttttttaattctcaacacatcacatcattttctctcttttatttaacattcatttaacttttatcctct 34529378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 10569878 - 10569806
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| ||||||||||||| | ||| |||||||||| ||||||||||||||| ||||    
T  10569878 ccactttttcaattcccaacactccacatcattttttgtctcttattcaacactcattcaacttttactctct 10569806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 25652816 - 25652888
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| | ||||||||||||||||| |||||||||| ||||| || |||||||||||    
T  25652816 ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattgaatttttaccctct 25652888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 32976650 - 32976575
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  32976650 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 32976575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 40888891 - 40888966
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  40888891 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 40888966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 25670980 - 25670907
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||  | |||||||| |||||||| |||||    
T  25670980 caacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaattttta 25670907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 27407819 - 27407740
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcatttt--ctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||| ||||||||| |||| |||| | |||||||||||||  |||||| |||||||||| ||||||||||||||||||||    
T  27407819 aacatccactttttcaatttccaatactccacatcattttatctctctcttattcaacactcattcaacttttaccctct 27407740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 34918543 - 34918474
Alignment:
Q  293 cacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||| |||| |||||| ||||||||||||||| ||||  |||||||| ||||||||||||||||||||    
T  34918543 cactttttcaatttccaacactccacatcattttctttctt--attcaacactcattcaacttttaccctct 34918474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 19241313 - 19241388
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  19241313 caacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 19241388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 23089515 - 23089590
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||  | ||||||||  ||||||| |||||||    
T  23089515 caacacccacttttttaattcccaacacttcacatcattttctctctcataattcaacacccattcaatttttacc 23089590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 27942488 - 27942563
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  27942488 caacacccactttttcaatccccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 27942563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 37882503 - 37882431
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||||  |||||||||  ||||||||||||||||    
T  37882503 caacacccattttttcaattcccaacactccacatcattttttctc--ttattcaacgctcattcaacttttacc 37882431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 42807074 - 42807000
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| || ||||||||  ||||||| ||||||    
T  42807074 caacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaatttttac 42807000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 42608095 - 42608042
Alignment:
Q  309 aacattccacatcattttctctcttttattcaacattcattcaacttttaccct 362  Q
    |||| ||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  42608095 aacactccacgtcattttctctcttttattcaacacttattcaacttttaccct 42608042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 9274523 - 9274457
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaac 353  Q
    ||||| ||||||||| ||||||||||| ||||||||||||| ||||| ||||| |||| |||||||||    
T  9274523 caacatccactttttcaattcccaacactccacatcatttt-tctctcttatttaacactcattcaac 9274457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 27407116 - 27407041
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattc-aacattcattcaacttttacc 360  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||| || |||| |||| ||||||||||||||||    
T  27407116 aacactcactttttcaattcccaacactccacattattttctctctcttaattctaacactcattcaacttttacc 27407041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 29619088 - 29619013
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||  | ||||||||  ||||||| |||||||    
T  29619088 caacacccactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaatttttacc 29619013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 30648187 - 30648112
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||| ||| |||||| |||||| ||||| || |||||||| |||||||| |||||||    
T  30648187 caacacccactttttcaattccctacactccacaccattttatctctcttaattcaacactcattcaatttttacc 30648112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 32363689 - 32363614
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttacc 360  Q
    ||||||||||||||||||||  ||||| ||||||| |||||||||||||| ||||||||  |||| || |||||||    
T  32363689 caacacccacttttttaattttcaacactccacattattttctctcttttaattcaacacccatttaatttttacc 32363614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 3454733 - 3454807
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||| ||||||||| ||||| ||||| |||||||||||||||||||  | |||||||| |||||||| ||||||    
T  3454733 caacatccactttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaatttttac 3454807  T

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Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 39238419 - 39238484
Alignment:
Q  294 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||||| ||||||||||| |||||||||||||||||||  | ||||||||| ||||||| |||||    
T  39238419 actttttcaattcccaacactccacatcattttctctctcataattcaacatccattcaattttta 39238484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 4219515 - 4219472
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctc 329  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||    
T  4219515 caacacccactttttcaattcccaacacttcacatcattttctc 4219472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 4938182 - 4938261
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctct 364  Q
    |||||| || ||||| ||||| ||| | || |||||||||||||||| ||| ||||||| | ||||||||||||||||||    
T  4938182 caacactcattttttcaattctcaatactcaacatcattttctctctcttaattcaacactaattcaacttttaccctct 4938261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 7651001 - 7651076
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccc 361  Q
    |||||| | ||||| ||||||||||| ||||||||||||||||||| || ||||||||  |||| || ||||||||    
T  7651001 aacacctattttttcaattcccaacactccacatcattttctctctcttaattcaacacccatttaatttttaccc 7651076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 31008458 - 31008384
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||| || ||| ||||  ||||||| |||||||    
T  31008458 aacacccactttttcaattctcaacacttcacatcattttctctctcttaatttaacacccattcaatttttacc 31008384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 36609286 - 36609336
Alignment:
Q  286 caacacccacttttttaatt-cccaacattccacatcattttctctctttt 335  Q
    |||||| |||||||||| || ||||||| ||||||||||||||||||||||    
T  36609286 caacacacacttttttattttcccaacactccacatcattttctctctttt 36609336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 39008477 - 39008551
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||| ||||||||| ||||||||||| |||| ||| ||||||||||  | ||||||||| ||||||| ||||||    
T  39008477 caacatccactttttcaattcccaacactccaaatcgttttctctctcataattcaacatccattcaatttttac 39008551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 23649235 - 23649167
Alignment:
Q  293 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||| ||||||||||| |||| |||||||||||| | || |||||||||| ||| || |||||||    
T  23649235 cactttttcaattcccaacactccatatcattttctctttcttaattcaacatttatttaatttttacc 23649167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 23809336 - 23809404
Alignment:
Q  293 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||| ||||||||||| |||| |||||||||||| | || |||||||||| ||| || |||||||    
T  23809336 cactttttcaattcccaacactccatatcattttctctttcttaattcaacatttatttaatttttacc 23809404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 927966 - 927888
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  927966 caacacccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactct 927888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 37245500 - 37245578
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  37245500 caacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 37245578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 9074293 - 9074221
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  9074293 ccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 9074221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 14152142 - 14152060
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttaccctcttca 367  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||    
T  14152142 caacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacacccattcaacttttaccatcttca 14152060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 39434086 - 39434008
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||| |||||    
T  39434086 caacacccactttttcaatttccaacattccacatcattttttctcttttattaaacactcattcaacttttatcctct 39434008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 5146786 - 5146707
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  5146786 caacacccatttttttaatttccaacactccacatcattttctctctctttattcaacactcatttaacttttaccctct 5146707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 38901719 - 38901797
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||| |||||||| |||||| |||| ||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  38901719 caacacacactttttcaattccaaacactccacatcattttctctctcttattcaacactcgttcaacttttaccctct 38901797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 1987125 - 1987196
Alignment:
Q  293 cacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||| ||||| ||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  1987125 cactttttcaattctcaacactccacatcattttctatctcttattcaacactcattcaacttttaccctct 1987196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 12855018 - 12855093
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| |||||||    
T  12855018 caacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacc 12855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 24997079 - 24997154
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| |||||||    
T  24997079 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacc 24997154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 30822658 - 30822583
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| |||||||    
T  30822658 caacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacc 30822583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 31193058 - 31192980
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||| | ||||| |||| |||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  31193058 caacacctattttttcaatttccaacactccacatcattttctctctcttattcaatactcattcaacttttaccctct 31192980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 4296846 - 4296771
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||||| |||||||| |||||||    
T  4296846 caacacccactttttcaattcccaacactccacattattttctctctcttaattcaacactcattcaatttttacc 4296771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 22351689 - 22351614
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  22351689 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 22351614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 43021740 - 43021815
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  43021740 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 43021815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 8852056 - 8852129
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| ||||| || |||||    
T  8852056 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatttaattttta 8852129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 36855846 - 36855770
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||| ||||| ||||||||||| ||| ||| ||||| ||||| |||||||||| ||||||||||||||||||||    
T  36855846 aacaccca-tttttcaattcccaacactccccattattttttctctcttattcaacactcattcaacttttaccctct 36855770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 6362953 - 6363031
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| |||||| |||| || |||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  6362953 caacatccactttttcaattcc-aacactctacatcattttctctctcttaattcaacactcattcaacttttaccctct 6363031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 7588579 - 7588502
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct---tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||   || ||||||||  ||||||| |||||||    
T  7588579 caacacccactttttcaattcccaacactccacatcattttctctctctcttaattcaacacccattcaatttttacc 7588502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 13151559 - 13151480
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctctttta-ttcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||| ||||||||||| | ||||| ||||| | ||| ||| ||||||| ||||||||||||||||||||    
T  13151559 caacacccactttttcaattcccaacactgcacataattttttttctcttaattcaacactcattcaacttttaccctct 13151480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 17485816 - 17485891
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||  | |||||||| |||||||| |||||||    
T  17485816 caacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacc 17485891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 39490142 - 39490215
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||||||||||||| ||||||||||| |||| |||||| ||||||| || |||||||| |||||||| |||||    
T  39490142 caacacccactttttcaattcccaacactccaaatcattctctctctcttaattcaacactcattcaattttta 39490215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 2780805 - 2780733
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| |||||| ||||||| |||||||||||||||| ||||||||||   ||| ||||||||| ||||    
T  2780805 ccactttttcaattcctaacattctacatcattttctctctcttattcaacacctatttaacttttactctct 2780733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 31174253 - 31174186
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||||| ||||||||||| ||||||| ||||  ||||| |||||||||| ||||||||||||||||    
T  31174253 ccactttttcaattcccaacactccacattattta-tctctcttattcaacactcattcaacttttacc 31174186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 7763562 - 7763489
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||||| ||||||| ||||| ||||| ||||||||||||||||||| || ||||||||  ||||||| |||||    
T  7763562 caacaccaactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaattttta 7763489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 36209549 - 36209476
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||||| ||||||| ||||| ||||| ||||||||||||||||| | || |||||||| |||||||| |||||    
T  36209549 caacacctactttttcaattctcaacactccacatcattttctctttcttaattcaacactcattcaattttta 36209476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 36526821 - 36526866
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||    
T  36526821 aacacccactttttcaattcccaacactccacattattttctctct 36526866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 6333452 - 6333396
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaac 342  Q
    ||||| ||||||||| |||||| || |||||| |||||||||||||| |||||||||    
T  6333452 caacatccactttttcaattcctaatattccatatcattttctctctcttattcaac 6333396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 1073158 - 1073083
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||  ||||| ||||| ||||||||||||| || |||||||| |||||||| |||||||    
T  1073158 caacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactcattcaatttttacc 1073083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 9117811 - 9117886
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||  ||||| ||||  ||||||||||||| || |||||||| |||||||| |||||||    
T  9117811 caacacccactttttcaattttcaacactccatttcattttctctctcttaattcaacactcattcaatttttacc 9117886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 1308772 - 1308726
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||| ||||||||| |||| |||||| |||||||||||||||||||    
T  1308772 caacatccactttttcaatttccaacactccacatcattttctctct 1308726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 14382966 - 14383012
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||| ||||||||| |||||| |||| |||||||||||||||||||    
T  14382966 caacatccactttttcaattcctaacactccacatcattttctctct 14383012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 17929330 - 17929284
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||| ||| ||||| ||||||||||| |||||||||||||||||||    
T  17929330 caacatccattttttcaattcccaacactccacatcattttctctct 17929284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 44279992 - 44280066
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||||||||| ||||  ||||| ||||||||||||||||||| || ||||||||  | ||||| |||||||    
T  44279992 aacacccactttttcaattttcaacactccacatcattttctctctcttaattcaacaccctttcaatttttacc 44280066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 17783372 - 17783450
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  17783372 caacatccacttttttaattcccaacattccacatcattttctctctcttattcaacactcattcaacttttactctct 17783450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 44451338 - 44451266
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  44451338 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 44451266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 44651074 - 44651146
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  44651074 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 44651146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 31468128 - 31468203
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||    
T  31468128 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacattcattcaatttttacc 31468203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 45239133 - 45239208
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  45239133 caacacccactttttcaattcccaacactccacatcattttctctctctttattcaacactcattcaatttttacc 45239208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 51494546 - 51494471
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||| |||||||    
T  51494546 caacacccacttttttaattctcaacactccacatcattttctctctcttaattcaacattcattcaatttttacc 51494471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 44334284 - 44334362
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  44334284 caacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttactctct 44334362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 44929364 - 44929286
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||| ||||| ||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  44929364 caacatccattttttcaattctcaacatttcaaatcattttctctcttttattcaacactcattcaacttttaccctct 44929286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 643890 - 643818
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| ||||| ||||||||||||| |||||||||| ||||||||| ||||||||||    
T  643890 ccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacatttaccctct 643818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 3755096 - 3755024
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||| ||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  3755096 ccactttttcaattctcaacactctacatcattttctctctcttattcaacattcaatcaacttttaccctct 3755024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 8464094 - 8464172
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||||||||| |||||||||| |||||||| |||||| ||||    
T  8464094 caacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaatttttactctct 8464172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 29523698 - 29523772
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||| ||||||| ||||||    
T  29523698 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacatccattcaatttttac 29523772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 8468319 - 8468394
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  |||| ||||||||||    
T  8468319 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacatttaacttttacc 8468394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 30878618 - 30878543
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||| || ||||||||| ||||||| |||||||    
T  30878618 caacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacatccattcaatttttacc 30878543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 41542325 - 41542401
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| ||||||||||| |||||||||| |||||||| |||||||||  |||||||||||||| |||||    
T  41542325 caacatccactttttcaattcccaacactccacatcatattctctctcttattcaac--tcattcaacttttatcctct 41542401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 45456225 - 45456150
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||||| |||||||| |||||||    
T  45456225 caacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaatttttacc 45456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 48388182 - 48388107
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  48388182 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 48388107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 48404325 - 48404400
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| |||||||    
T  48404325 caacaccaactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacc 48404400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 27630534 - 27630460
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||| || |||||||| |||||||| ||||||    
T  27630534 caacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 27630460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 37420418 - 37420344
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||| || |||||||| |||||||| ||||||    
T  37420418 caacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 37420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 37646633 - 37646559
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  37646633 aacacctacttttttaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 37646559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 52933833 - 52933764
Alignment:
Q  295 cttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||| |||||| |||| ||||| ||||||||||||| |||||||||| ||||||||||||||| ||||    
T  52933833 ctttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactct 52933764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 52941468 - 52941399
Alignment:
Q  295 cttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||| |||||| |||| ||||| ||||||||||||| |||||||||| ||||||||||||||| ||||    
T  52941468 ctttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactct 52941399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 20584925 - 20584853
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaactttta 358  Q
    |||||| |||||||| ||||||||||| |||||||||||||||| || ||||| |||| | ||||||||||||    
T  20584925 caacacacactttttcaattcccaacactccacatcattttctcactcttatttaacacttattcaactttta 20584853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 2478402 - 2478327
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  | ||||| |||||||    
T  2478402 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacc 2478327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 19578984 - 19578909
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  19578984 caacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 19578909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 33164408 - 33164481
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    |||||||||||||| |||||||||||||||| || ||||| ||||| || |||||||| |||||||| ||||||    
T  33164408 aacacccactttttcaattcccaacattccagattattttatctctcttaattcaacactcattcaatttttac 33164481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 37691357 - 37691289
Alignment:
Q  293 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||| ||||||||||| ||||||| ||||||||||| || ||||||||| ||||||| |||||||    
T  37691357 cactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaatttttacc 37691289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 14096686 - 14096761
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||| ||||||||||| |||| |||||||| ||||| || |||||||| |||||||| |||||||    
T  14096686 caacacctactttttcaattcccaacactccaaatcattttatctctcttaattcaacactcattcaatttttacc 14096761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 23092764 - 23092839
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||||| || ||||||||  ||||||  |||||||    
T  23092764 caacacccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcagtttttacc 23092839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 31159390 - 31159457
Alignment:
Q  294 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  31159390 actttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 31159457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 35847195 - 35847120
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||  | ||||||||  ||||||| |||||||    
T  35847195 caacatccacttttttaatttccaacactccacatcattttctctctcataattcaacacccattcaatttttacc 35847120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 40500396 - 40500472
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||||||||| | |||| |||| | ||||| |||||||| || |||||||||| ||||| ||||||||||||||    
T  40500396 aacacccactttttcagttccgaacacttcacat-attttctccctcttattcaacactcatttaacttttaccctct 40500472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 37822565 - 37822640
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctc--ttttattcaacattcattcaacttttacc 360  Q
    ||||| |||||||| ||||| ||||| ||||||||||||||||||   || |||||||| |||||||| |||||||    
T  37822565 aacactcactttttcaattctcaacactccacatcattttctctcctcttaattcaacactcattcaatttttacc 37822640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 39149071 - 39149143
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaactttta 358  Q
    ||||||||| |||||   ||| ||||| || |||||||||||||| | |||||||| ||||||||||||||||    
T  39149071 caacacccattttttctcttctcaacactctacatcattttctctatcttattcaatattcattcaactttta 39149143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 48729347 - 48729395
Alignment:
Q  316 cacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||| | ||||||||||  |||||||||||||||||||    
T  48729347 cacatcattttctctttcttattcaacacacattcaacttttaccctct 48729395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 36230352 - 36230427
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||| ||||||||||| | ||||||||||| ||||| || ||||||||  ||||||| |||||||    
T  36230352 caacaccaactttttcaattcccaacacttcacatcattttatctctcttaattcaacacccattcaatttttacc 36230427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 36302977 - 36303055
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||| ||||| ||||  ||||| ||||||| ||||||||| | ||||||||||   ||||||||||||||||||    
T  36302977 caacatccattttttcaattttcaacactccacattattttctctttcttattcaacacatattcaacttttaccctct 36303055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 45623596 - 45623531
Alignment:
Q  294 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||||| |||||| |||| ||||||||||||||||||| || |||||||| ||||| || |||||    
T  45623596 actttttcaattcctaacactccacatcattttctctctcttaattcaacactcatttaattttta 45623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 359
Target Start/End: Complemental strand, 47300561 - 47300497
Alignment:
Q  296 ttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttac 359  Q
    ||||| ||||| || || |||||||||||||||||||||| ||||||||  ||||||| ||||||    
T  47300561 tttttcaattctcagcactccacatcattttctctcttttaattcaacacacattcaatttttac 47300497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 26749482 - 26749401
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    ||||||||| ||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26749482 caacacccatttttttaattctcaacactccatatcattttctcccttttattcaacattcattcaacttttaccctcttca 26749401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 5212294 - 5212366
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5212294 ccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 5212366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 18029571 - 18029495
Alignment:
Q  288 acacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  18029571 acacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 18029495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 36912414 - 36912492
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  36912414 caacacccactttttcaattcccaacactctacatcattttctctctcttattcaacactcattcaacttttaccctct 36912492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 34955734 - 34955662
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  34955734 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 34955662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 8610048 - 8609977
Alignment:
Q  293 cacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  8610048 cactttttcaattcccaacactccatatcattttctctcttttattcaacactcattcaacttttaccctct 8609977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 17741709 - 17741787
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| ||||||||| | ||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  17741709 caacatccactttttcaattcccaagactccacatcattttctctctcttattcaatactcattcaacttttaccctct 17741787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 26632227 - 26632149
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||||| |||||||||| ||||||||||||||| ||||    
T  26632227 caacacccactttttcaattcccaacacgccacgtcattttctctctcttattcaacactcattcaacttttactctct 26632149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 41477180 - 41477254
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  41477180 caacatccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttacc 41477254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 296 - 367
Target Start/End: Complemental strand, 30470882 - 30470811
Alignment:
Q  296 ttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    ||||| ||||||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  30470882 tttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttactctcttca 30470811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 38584968 - 38584893
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccc 361  Q
    |||||| |||||||| ||||||||||| ||||| ||||||||||||| |||||||||| || ||||||||||||||    
T  38584968 caacacacactttttcaattcccaacactccacgtcattttctctctcttattcaacactcgttcaacttttaccc 38584893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 39811133 - 39811054
Alignment:
Q  286 caacacccactttttt-aattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||||||||||| |||||| | || ||||||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  39811133 caacacccactttttttaattcctagcactccacatcattttatctctcttattcaacactcattcaacttttaccctct 39811054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 43525163 - 43525088
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttacc 360  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| |||||||| |||||||    
T  43525163 caacacccactttttcaatttccaacactccacatcattttctctcttttaattcaacactcattcaatttttacc 43525088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 4625568 - 4625496
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaactttta 358  Q
    |||||| |||||||| ||||||||||| |||| || ||||||||||| |||||||||| ||||||||||||||    
T  4625568 caacactcactttttcaattcccaacactccaaattattttctctctcttattcaacactcattcaactttta 4625496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 42860717 - 42860789
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| ||||||||||||||||| | |||||||||| ||||||||| |||| |||||    
T  42860717 ccactttttcaattcccaacactccacatcattttctctttcttattcaacactcattcaacatttaacctct 42860789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 1958254 - 1958179
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  1958254 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 1958179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 35099432 - 35099507
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||| || |||||||| |||||||| |||||||    
T  35099432 caacacccactttttcaattcccaacactctacatcattttctctctcttaattcaacactcattcaatttttacc 35099507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 43618423 - 43618348
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||||| || ||||||||| ||||||| |||||||    
T  43618423 caacacccactttatcaattcccaacactccacatcattttctctctcttaattcaacatccattcaatttttacc 43618348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 45101099 - 45101024
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  45101099 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 45101024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 13814952 - 13815022
Alignment:
Q  294 acttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||| |||| |||||| ||||||||||||||||||| |||||||||| | ||||||| ||||||||||    
T  13814952 actttttcaatttccaacactccacatcattttctctctcttattcaacactaattcaacatttaccctct 13815022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 42859922 - 42859996
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| ||||||    
T  42859922 caacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttac 42859996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 29637228 - 29637148
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    |||| ||| ||||| |||| |||||| ||||||| ||||||||| | ||||| |||| |||||||||||||||||||||||    
T  29637228 aacatccattttttcaatttccaacactccacataattttctctttcttatttaacactcattcaacttttaccctcttca 29637148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 15053629 - 15053704
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||| || ||||||||  ||||||| |||||||    
T  15053629 caacacccactttttcaattcccaacactccgcatcattttctctctcttaattcaacacccattcaatttttacc 15053704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 31129577 - 31129502
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||| ||||| ||||| ||||||||||||||||||| || |||| ||| ||||||||||||||||    
T  31129577 caacaccaactttttcaattctcaacactccacatcattttctctctcttaattcgacactcattcaacttttacc 31129502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 43524465 - 43524390
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||  | |||||||| |||||||| |||||||    
T  43524465 caacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacc 43524390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 7990428 - 7990506
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||| ||||||||  ||||| ||||| | ||||| | ||| |||||||||| ||||||||||||||||||||    
T  7990428 caacacccactattttaattttcaacactccacgttattttttttctcttattcaacactcattcaacttttaccctct 7990506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 5735290 - 5735362
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||  ||| | || |||||||||||||||| |||||||||| |||||||| |||||||||||    
T  5735290 ccactttttcaattttcaatactcgacatcattttctctctcttattcaacactcattcaatttttaccctct 5735362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 30289794 - 30289726
Alignment:
Q  296 ttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||| ||||| || |||||||||||||||| |||||||| |  |||||||||||||||||||    
T  30289794 tttttcaattctcaacactctacatcattttctctctcttattcaatacacattcaacttttaccctct 30289726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 44149867 - 44149911
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctct 330  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||    
T  44149867 caacactcacttttttaatttccaacattccacatcattttctct 44149911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 30532516 - 30532453
Alignment:
Q  294 acttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttt 356  Q
    ||||||| |||||| |||| |||  |||||||||||||| ||||||||||||||||||||||||    
T  30532516 actttttcaattcctaacactccgtatcattttctctctctttattcaacattcattcaacttt 30532453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 40283472 - 40283547
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||  | ||||||||  ||||||| |||||||    
T  40283472 caacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaatttttacc 40283547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 23353251 - 23353189
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaact 354  Q
    ||||||||| |||| |||||| ||||||||  ||||||||| ||||| |||||||||||||||    
T  23353251 ccactttttcaatttccaacactccacatccctttctctctcttatttaacattcattcaact 23353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 26244501 - 26244569
Alignment:
Q  293 cacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||| ||||||||||| |||||||||||||||||||  | ||||||||  ||||||| |||||||    
T  26244501 cactttttcaattcccaacactccacatcattttctctctcataattcaacacacattcaatttttacc 26244569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 12272556 - 12272481
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||  ||||| ||||| ||||||||||||| || |||||||| |||||||| |||||||    
T  12272556 caacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactcattcaatttttacc 12272481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 13947363 - 13947438
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||| |||  | ||||||||  ||||||| |||||||    
T  13947363 caacacctactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaatttttacc 13947438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 35931859 - 35931934
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| |||| |||||| ||||||||||||||||||| || ||||||||  | ||||| |||||||    
T  35931859 caacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacc 35931934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 7511921 - 7511885
Alignment:
Q  296 ttttttaattcccaacattccacatcattttctctct 332  Q
    |||||||||| |||||| |||||||||||||||||||    
T  7511921 ttttttaatttccaacactccacatcattttctctct 7511885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 29731692 - 29731732
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcatttt 326  Q
    ||||||||||||||| ||||||||||| ||||| |||||||    
T  29731692 caacacccactttttcaattcccaacactccacgtcatttt 29731732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 44503166 - 44503210
Alignment:
Q  288 acacccacttttttaattcccaacattccacatcattttctctct 332  Q
    |||| |||||||| ||||||||||| ||||| |||||||||||||    
T  44503166 acacacactttttcaattcccaacactccacgtcattttctctct 44503210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 42601760 - 42601834
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  42601760 caacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacc 42601834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 46572999 - 46572921
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  46572999 caacacccactttttcaattcccaacactccacatcattttctctctcttattcaagactcattcaacttttaccctct 46572921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 42601573 - 42601501
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  42601573 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 42601501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 41890540 - 41890611
Alignment:
Q  293 cacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  41890540 cactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 41890611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 25450708 - 25450630
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  25450708 caacacccattttttcaattcccaacgctccacatcattttctctctcttattcaacattcattcaacttttatcctct 25450630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 37410493 - 37410415
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||  |||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37410493 caacaccatctttttcaattcccaatactccacatcattttctctctcttattcaacattcattcaacttttaccctct 37410415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 33934996 - 33935068
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  33934996 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcaatcaacttttaccctct 33935068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 49357565 - 49357493
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||||||||||||| |||||| || |||||||||||||| |||||||||| ||||||||||||||||||||    
T  49357565 ccacttttttaattcctaacatttcatatcattttctctctcttattcaacactcattcaacttttaccctct 49357493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 49823238 - 49823170
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  49823238 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacc 49823170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 51427105 - 51427173
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  51427105 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacc 51427173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 28410393 - 28410467
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    |||||||||||||||   ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  28410393 caacacccactttttctcttcccaacactccacgtcattttctctcttttattcaacactcattcaacttttacc 28410467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 49147354 - 49147288
Alignment:
Q  294 acttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  49147354 actttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacc 49147288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 50033666 - 50033744
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| |||||||||||||| ||||||||| |||||||||| ||||| |||||||||| ||||||||||||||| ||||    
T  50033666 caacatccacttttttaatttccaacattctacatcattttttctctcttattcaacactcattcaacttttactctct 50033744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 25832792 - 25832723
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccc 361  Q
    ||||||||| ||||||||||| | ||||||||||||||||| |||||||||| |||||||||||||||||    
T  25832792 ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaacttttaccc 25832723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 35853266 - 35853193
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttac 359  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  35853266 caacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 35853193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 43022647 - 43022720
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttac 359  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  43022647 caacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 43022720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 49710463 - 49710390
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttac 359  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  49710463 caacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 49710390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 15493894 - 15493822
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    |||||||| |||||| ||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||||    
T  15493894 caacaccctctttttcaattcccaacactccacatcactttctctc--ttattcaacattcattcaacttttacc 15493822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 25790849 - 25790774
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| |||||||    
T  25790849 caacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacc 25790774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 33748684 - 33748758
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||||| | ||||| |||| |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  33748684 caacacctattttttcaatttccaacactccacatcattttctctcttttactcaacactcattcaacttttacc 33748758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 35424083 - 35424005
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||| ||||| ||||||||||| ||||||||||||| ||||| |||||||||| |||||| |||||||||||||    
T  35424083 caacatccattttttcaattcccaacactccacatcattttttctctcttattcaacactcattcgacttttaccctct 35424005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 50017058 - 50017128
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccct 362  Q
    ||||||||| ||||||||||| || |||||||||||||| | |||||||||| ||||||||||||||||||    
T  50017058 ccactttttcaattcccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct 50017128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 29701681 - 29701757
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccc 361  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| ||||||||    
T  29701681 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttaccc 29701757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 138974 - 139053
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttaccctct 364  Q
    ||||| || |||||| ||||||||||| ||||||||||||| ||||| || |||||||| ||||||||||||||||||||    
T  138974 caacatccgctttttcaattcccaacactccacatcattttgtctctcttaattcaacactcattcaacttttaccctct 139053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 6048770 - 6048695
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  6048770 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 6048695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 17466514 - 17466589
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  17466514 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 17466589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 30418503 - 30418428
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  30418503 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 30418428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 33795566 - 33795488
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    ||||| ||||||||||||||||||||| |||   ||||||||||| | |||||||||| ||||||||||||||| |||||||    
T  33795566 caacatccacttttttaattcccaacaatcc---tcattttctctttcttattcaacactcattcaacttttactctcttca 33795488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 47144172 - 47144247
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| | |||||| |||||||    
T  47144172 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacttattcaatttttacc 47144247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 5845214 - 5845140
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||| || |||||||| |||||||| ||||||    
T  5845214 caacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 5845140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 42560900 - 42560946
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  42560900 caacacccactttttcaattcccaacattccacatcattttctctct 42560946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 6832383 - 6832456
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaactttta 358  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||| |||||| |||||||| |||||||| |||||    
T  6832383 caacatccactttttcaattcccaacactccacatcattttctttcttttaattcaacactcattcaattttta 6832456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 51999311 - 51999238
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaactttta 358  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||    
T  51999311 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta 51999238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 20139363 - 20139434
Alignment:
Q  290 acccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||| ||||| ||||| | ||||||||||||||||| || |||||||| ||||||||||||||||    
T  20139363 acccactttttcaattctcaacacttcacatcattttctctctcttaattcaacactcattcaacttttacc 20139434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 32120512 - 32120437
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  | ||||| |||||||    
T  32120512 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacc 32120437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 41183273 - 41183348
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||| ||| |||||||    
T  41183273 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatacaatttttacc 41183348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 43473889 - 43473964
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||||| || ||||||||  ||||||| |||||||    
T  43473889 caacatccactttttcaattcccaacattccagatcattttctctctcttaattcaacacccattcaatttttacc 43473964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 44084308 - 44084383
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  | ||||| |||||||    
T  44084308 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacc 44084383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 47701137 - 47701058
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatca-ttttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||||||||| ||||| ||||| ||||||||| |||| ||||| |||||||||| ||||| ||||||||| ||||    
T  47701137 caacacccactttttcaattctcaacactccacatcatttttttctctcttattcaacactcattaaacttttactctct 47701058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 50415904 - 50415829
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  50415904 caacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 50415829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 10426505 - 10426455
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctctttta 336  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  10426505 caacacccattttttcaattcccaacactccacatcattttctctctttta 10426455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 12974667 - 12974713
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  12974667 caacacccactttttcaattcccaacactccacatcattttctctct 12974713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 49407411 - 49407330
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctcttca 367  Q
    ||||| ||||||||| |||| | |||| | ||| | |||||||||||||||||||| | |||||||||||||||| ||||||    
T  49407411 caacatccactttttcaatttcgaacacttcaccttattttctctcttttattcaatactcattcaacttttaccttcttca 49407330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 42258316 - 42258407
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctctttt----------attcaacattcattcaacttttaccctcttca 367  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||    
T  42258316 caacacccactttttctcttcccaacactccacatcattttctctctcttccatctatacattcaacattcattcaacttttaccctcttca 42258407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 359
Target Start/End: Complemental strand, 52000126 - 52000062
Alignment:
Q  296 ttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||||||||||||||| |||||||||||||||||||  | |||||||||| |||||| ||||||    
T  52000126 ttttttaattcccaacactccacatcattttctctctcataattcaacatttattcaatttttac 52000062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 7521211 - 7521144
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaac 353  Q
    |||||||| |||||| |||| |||||| | || |||||||||||||| |||||||||| |||||||||    
T  7521211 caacacccgctttttcaatttccaacacttcagatcattttctctctcttattcaacactcattcaac 7521144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 26165628 - 26165553
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||  | ||||||||  ||||||| |||||||    
T  26165628 caacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaatttttacc 26165553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 36178778 - 36178703
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| | || ||||||||||||||  | ||||||||| ||||||| |||||||    
T  36178778 caacacccactttttcaattcccaacacttcaaatcattttctctctcataattcaacatccattcaatttttacc 36178703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 46123925 - 46124000
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||| ||||||| |||| ||||||||| ||||||||||||||||  | |||||||| |||||||| |||||||    
T  46123925 caacacctactttttcaatttccaacattctacatcattttctctctcataattcaacactcattcaatttttacc 46124000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 4045979 - 4046025
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  4045979 caacatccactttttcaattcccaacactccacatcattttctctct 4046025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 49028617 - 49028573
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctct 330  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||    
T  49028617 caacacacacttttttaattcccaacactccatatcattttctct 49028573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 11908018 - 11908093
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| |||| |||||| ||||||||||||| |||||  | ||||||||  ||||||| |||||||    
T  11908018 caacacccactttttcaatttccaacactccacatcattttttctctcataattcaacacccattcaatttttacc 11908093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 27847408 - 27847483
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| |||| |||||| ||||||||||||||||||| || ||||||||  |||| || |||||||    
T  27847408 caacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccatttaatttttacc 27847483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 37183911 - 37183844
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaa 352  Q
    |||||| |||||||| |||||| |||| ||||||||||||||||||| || ||||||||  |||||||    
T  37183911 caacactcactttttcaattcctaacactccacatcattttctctctcttaattcaacacccattcaa 37183844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 359
Target Start/End: Complemental strand, 50176149 - 50176086
Alignment:
Q  296 ttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttac 359  Q
    ||||| ||||||||||| ||||||||||||| ||||| |||||||||    |||||||||||||    
T  50176149 tttttcaattcccaacactccacatcattttatctctcttattcaacgcatattcaacttttac 50176086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Original strand, 7008054 - 7008100
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||||||||||||| |||| |||||| || ||||||||||||||||    
T  7008054 caacacccactttttcaatttccaacactctacatcattttctctct 7008100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 35472700 - 35472654
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct 332  Q
    ||||| ||||||||| ||||||||||| ||||||| |||||||||||    
T  35472700 caacatccactttttcaattcccaacactccacattattttctctct 35472654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 29428592 - 29428514
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  29428592 caacatccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactct 29428514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 6380557 - 6380485
Alignment:
Q  292 ccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  6380557 ccactttttcaattcccaacactccacatcattttctctctcttattcaacacacattcaacttttaccctct 6380485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 24348430 - 24348505
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctctttt-attcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  24348430 caacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacatccattcaatttttacc 24348505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 32359743 - 32359821
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    |||||| || ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||    
T  32359743 caacactcaatttttcaattcccaacattccacatcattttctctctcttattcaacactcattccatttttaccctct 32359821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 6725699 - 6725626
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttac 359  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  6725699 caacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 6725626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 631515 - 631590
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||| |||||||| |||||||    
T  631515 caacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacc 631590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 22627833 - 22627899
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaa 352  Q
    |||||||||| |||| |||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  22627833 caacacccacgttttcaatttccaacactccacatcattttctctcttttattcaacatccattcaa 22627899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 8660556 - 8660631
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  8660556 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacattcaatttttacc 8660631  T

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Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 34328278 - 34328352
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||| || |||||||| |||||||| ||||||    
T  34328278 caacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 34328352  T

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Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 34838578 - 34838653
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  34838578 caacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 34838653  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 12501832 - 12501904
Alignment:
Q  289 cacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  12501832 cacccactttttcaattctcaacaatccacatcattttctctctcttaattcaacacccattcaatttttacc 12501904  T

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Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 10883869 - 10883944
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| |||| |||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  10883869 caacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 10883944  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 17961338 - 17961263
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||| || ||||||||  ||| ||| |||||||    
T  17961338 caacacccactttttcaattcccaacactccacataattttctctctcttaattcaacaaacatacaatttttacc 17961263  T

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Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 30446241 - 30446316
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||| ||||| |||||| |||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  30446241 caacacccattttttcaattcctaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 30446316  T

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Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 197801 - 197875
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttac 359  Q
    ||||| ||||||||| ||||||||||| ||||| ||||||||||||| || ||||||||  ||||||| ||||||    
T  197801 caacatccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcaatttttac 197875  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 12512911 - 12512985
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||| ||||||||| ||||  ||||||||||||||||||| ||||| || ||||||||  ||||||| |||||||    
T  12512911 aacatccactttttcaattttcaacattccacatcattttttctctcttaattcaacacccattcaatttttacc 12512985  T

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Target: scaffold0362 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 5397 - 5322
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| | || ||||||||| ||||||| |||||||    
T  5397 caacacccactttttcaattcccaacactccacatcattttctctttcttaattcaacatccattcaatttttacc 5322  T

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Target: scaffold0054 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 57817 - 57742
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| || ||||||||  ||||||| |||||||    
T  57817 caacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 57742  T

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Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 124013 - 124085
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttacc 360  Q
    ||||| ||||||||| |||| |||||| ||||||||||||| ||||  |||||||||| ||||||||||||||||    
T  124013 caacatccactttttcaatttccaacactccacatcattttttctc--ttattcaacactcattcaacttttacc 124085  T

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Target: scaffold0100 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 30612 - 30534
Alignment:
Q  286 caacacccacttttttaattcccaacattccacatcattttctctcttttattcaacattcattcaacttttaccctct 364  Q
    ||||| ||||||||| ||||| ||||| |||| || ||||||||||| |||||||||| | ||||||||||||| ||||    
T  30612 caacatccactttttcaattctcaacactccatataattttctctctcttattcaacacttattcaacttttactctct 30534  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 66145 - 66071
Alignment:
Q  287 aacacccacttttttaattcccaacattccacatcattttctctct-tttattcaacattcattcaacttttacc 360  Q
    |||||| ||||||| ||||| ||||| |||||||||||||||||||  | |||||||| |||||||| |||||||    
T  66145 aacacctactttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaatttttacc 66071  T

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