View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19836_high_52 (Length: 258)
Name: NF19836_high_52
Description: NF19836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19836_high_52 |
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Alignment Details
Target: chr4 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 53935348 - 53935476
Alignment:
| Q |
11 |
ggactcgaatttccaggaaaatgaaacagagttaaaacacagtatgggacctgcctctgcttgcaactgcaatgcaatcaattcttctatcacaaggttc |
110 |
Q |
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| T |
53935348 |
ggactcgaatttccaggaaaatgaaacagagttaaaacacagtatgggacctgcctctgcttgcaactgcaatgcaatcaattcttctatcacaaggttc |
53935447 |
T |
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| Q |
111 |
aaaagttgaatctcaaacatacgtacaga |
139 |
Q |
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| T |
53935448 |
aaaagttgaatctcaaacatacgtacaga |
53935476 |
T |
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