View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19836_high_59 (Length: 240)
Name: NF19836_high_59
Description: NF19836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19836_high_59 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 222
Target Start/End: Complemental strand, 28053652 - 28053450
Alignment:
| Q |
20 |
aggaagaagaagaggaacatcatgaagaagaaaaactcaacgatcagaagaactacgctaaggagtgtaaagaaagctatgaactacaaacagcgttggc |
119 |
Q |
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| T |
28053652 |
aggaagaagaagaggaacatcatgaagaagaaaaactcaacgatcagaagaactacgctaaggagtgtaaagaaagctatgaactacaaacagcgttggc |
28053553 |
T |
|
| Q |
120 |
gaagaggctttctttcttatcaacctttggttcggaaccggttctcacttttgatactggattggaaacctgggatgttgaatcagtttctcgtcgttta |
219 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28053552 |
gaagaggctttctttcttatcaacctttggttcagaaccggttctcacttttgatactggattggaaacctgggatgttgaatcagtttctcgtcgttta |
28053453 |
T |
|
| Q |
220 |
tgg |
222 |
Q |
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||| |
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| T |
28053452 |
tgg |
28053450 |
T |
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