View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19836_low_11 (Length: 500)
Name: NF19836_low_11
Description: NF19836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19836_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 466; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 1 - 486
Target Start/End: Original strand, 27066130 - 27066615
Alignment:
| Q |
1 |
tcagcacctttagcatagcctttgaaagtttcacttcctggagattttggataacctggattaagaccgtagttattgaaatccaccttgaccccgcgct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
27066130 |
tcagcacctttagcatagcctttgaaagtttcacttcctggagattttggataatctggattttgaccgtagttattgaaatccaccttgaccccgcgct |
27066229 |
T |
|
| Q |
101 |
gcgaattctcaccatacgaagtgaaagaatcatcaccagaaccagctccatctctgtaattggtgaatttctcttgagcagcaaaacttcctttaccata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27066230 |
gcgaattctcaccatacgaagtgaaagaatcatcaccagaaccagctccatctctgtaattggtgaatttctcttgagcagcaaaacttcctttaccata |
27066329 |
T |
|
| Q |
201 |
gttcttgaaagtattctcaggtttgttcaaattcttgctatagcttacgaaagcatctacagcgcttgagcctttttctgaatatccagagaaatcagat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27066330 |
gttcttgaaagtattctcaggtttgttcaaattcttactatagcttacgaaagcatctacagcgcttgagcctttttctgaatatccagagaaatcagat |
27066429 |
T |
|
| Q |
301 |
ttgaagacgttagcatttttcgcatactgagtgaaaccgttaactgcgtgaatagagtctttgccgtaacttgcgaaactttggttaccggagttaccac |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27066430 |
ttgaagacgttagcatttttcgcatactgagtgaaaccgttaactgcgtgaatagagtctttgccgtaacttgcgaaactttggttaccggagttaccac |
27066529 |
T |
|
| Q |
401 |
catcgctgtagcttacgaatgattgttctcttccggtcacggaggctgtgtaggtggtgaattttacgttaggaatgttgctttct |
486 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
27066530 |
catcgctgtagcttacgaatgattgttctcttccggtcacggaggctgtgtaggtggtgaattttaggttaggaatgttgctttct |
27066615 |
T |
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