View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19836_low_40 (Length: 305)
Name: NF19836_low_40
Description: NF19836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19836_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 34824900 - 34825192
Alignment:
| Q |
1 |
ttaagagtattgtggtcaactttagccaatagaactttggagggttatttgaatggagatcctaaagcttttttatccccaaatatgtaggttggagtta |
100 |
Q |
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| T |
34824900 |
ttaagagtattgtggtcaactttagccaatagaactttggagggttatttgaatggaggtcctaaagcttttttatccccaaatatgtaggttggagtta |
34824999 |
T |
|
| Q |
101 |
cgttttatgtgatta----aattgacaactttagcgctggacttgtcaatatagatcaataactcaagccaacatttacatgttcttcaatgttcctttg |
196 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34825000 |
cgttttatgtgattacataaattgacaactttagcgctggacttgtcaatatagatcaataactcaagccaacatttacatgttcttcaatgttcctttg |
34825099 |
T |
|
| Q |
197 |
tattgttcaatttggcatagtagattcggtctacttttacatcaaagnnnnnnnattttactcatcagcaaagttaaatatacatgtagatgc |
289 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
34825100 |
tattgttcaatttggcatagtcgattcggtctacttttacatcaaagtttttttattttactcatcagcaaagttaaatatacatgtagatgc |
34825192 |
T |
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