View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19836_low_6 (Length: 602)

Name: NF19836_low_6
Description: NF19836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19836_low_6
NF19836_low_6
[»] chr2 (54 HSPs)
chr2 (1-586)||(27765394-27765999)
chr2 (193-453)||(35666067-35666324)
chr2 (5-165)||(28449241-28449401)
chr2 (1-156)||(16586673-16586827)
chr2 (194-357)||(16587098-16587261)
chr2 (51-114)||(21748260-21748323)
chr2 (198-398)||(21748520-21748720)
chr2 (29-156)||(16586872-16586998)
chr2 (51-156)||(16492256-16492361)
chr2 (29-114)||(17417202-17417287)
chr2 (1-114)||(18848605-18848718)
chr2 (29-114)||(19564944-19565029)
chr2 (11-114)||(22311307-22311411)
chr2 (193-364)||(16917409-16917580)
chr2 (196-255)||(28449478-28449537)
chr2 (194-398)||(25916600-25916803)
chr2 (1-112)||(13073900-13074010)
chr2 (193-364)||(19878060-19878231)
chr2 (193-252)||(25564008-25564067)
chr2 (59-114)||(35665947-35666002)
chr2 (334-414)||(22311916-22311996)
chr2 (11-110)||(18922614-18922713)
chr2 (29-87)||(20588555-20588613)
chr2 (29-114)||(21548013-21548099)
chr2 (208-398)||(21548309-21548499)
chr2 (193-243)||(42297617-42297667)
chr2 (334-400)||(45622026-45622092)
chr2 (503-586)||(16587391-16587475)
chr2 (194-255)||(29409658-29409719)
chr2 (334-398)||(17417576-17417640)
chr2 (194-397)||(42256182-42256383)
chr2 (334-413)||(19564532-19564611)
chr2 (51-98)||(21578361-21578408)
chr2 (1-96)||(23959637-23959731)
chr2 (503-534)||(25189076-25189107)
chr2 (67-114)||(29409926-29409973)
chr2 (54-96)||(22132010-22132052)
chr2 (5-46)||(15375918-15375959)
chr2 (51-96)||(25916344-25916389)
chr2 (29-113)||(22268933-22269015)
chr2 (334-398)||(29409516-29409580)
chr2 (216-284)||(45572272-45572340)
chr2 (216-284)||(45575939-45576007)
chr2 (216-284)||(45579606-45579674)
chr2 (216-284)||(45583273-45583341)
chr2 (216-284)||(45586940-45587008)
chr2 (216-284)||(45590607-45590675)
chr2 (216-284)||(45594274-45594342)
chr2 (216-284)||(45597941-45598009)
chr2 (216-284)||(45601608-45601676)
chr2 (216-284)||(45605275-45605343)
chr2 (216-284)||(45608942-45609010)
chr2 (216-284)||(45612609-45612677)
chr2 (216-284)||(45616276-45616344)
[»] chr3 (41 HSPs)
chr3 (193-586)||(13291690-13292087)
chr3 (201-586)||(19306943-19307333)
chr3 (193-399)||(10928854-10929060)
chr3 (20-156)||(5554685-5554821)
chr3 (193-455)||(14427224-14427486)
chr3 (1-179)||(38076103-38076281)
chr3 (193-284)||(17119030-17119121)
chr3 (193-431)||(38076326-38076563)
chr3 (425-586)||(12755821-12755984)
chr3 (1-124)||(17119263-17119387)
chr3 (1-155)||(4514880-4515035)
chr3 (194-396)||(27485958-27486160)
chr3 (194-360)||(4514613-4514778)
chr3 (378-586)||(12759117-12759327)
chr3 (506-586)||(13363120-13363200)
chr3 (336-490)||(17034595-17034747)
chr3 (65-156)||(14427034-14427125)
chr3 (62-152)||(4767495-4767585)
chr3 (1-114)||(14332529-14332643)
chr3 (12-97)||(27405712-27405796)
chr3 (219-262)||(4767763-4767806)
chr3 (1-100)||(9796431-9796530)
chr3 (193-252)||(10686601-10686660)
chr3 (29-108)||(16198772-16198851)
chr3 (503-586)||(10928661-10928744)
chr3 (328-410)||(19905634-19905714)
chr3 (194-252)||(2120515-2120573)
chr3 (1-114)||(14252235-14252349)
chr3 (193-239)||(17637497-17637543)
chr3 (194-255)||(19905770-19905831)
chr3 (12-148)||(13291447-13291582)
chr3 (503-586)||(17118725-17118809)
chr3 (3-95)||(17637248-17637340)
chr3 (503-534)||(20724770-20724801)
chr3 (142-196)||(13291593-13291647)
chr3 (59-156)||(19905948-19906044)
chr3 (387-455)||(4514528-4514596)
chr3 (304-360)||(9323548-9323603)
chr3 (171-207)||(14427157-14427193)
chr3 (503-535)||(17239368-17239400)
chr3 (503-535)||(46350292-46350324)
[»] chr7 (32 HSPs)
chr7 (193-493)||(32957398-32957697)
chr7 (194-586)||(19141964-19142357)
chr7 (194-586)||(20741363-20741756)
chr7 (184-540)||(17891348-17891705)
chr7 (193-585)||(27707323-27707708)
chr7 (194-413)||(1777074-1777292)
chr7 (193-537)||(1782761-1783107)
chr7 (1-152)||(32957800-32957951)
chr7 (216-362)||(10646801-10646947)
chr7 (1-142)||(27707053-27707194)
chr7 (1-152)||(19143779-19143930)
chr7 (1-152)||(20743178-20743329)
chr7 (1-95)||(10646558-10646652)
chr7 (1-148)||(17891131-17891278)
chr7 (198-453)||(22975121-22975376)
chr7 (1-107)||(8105908-8106014)
chr7 (1-207)||(15053293-15053495)
chr7 (53-152)||(26822535-26822634)
chr7 (193-454)||(26822161-26822423)
chr7 (51-138)||(7185407-7185494)
chr7 (145-204)||(8105787-8105846)
chr7 (1-115)||(1783248-1783362)
chr7 (304-455)||(5265097-5265245)
chr7 (416-550)||(9063681-9063819)
chr7 (29-114)||(22975558-22975644)
chr7 (154-207)||(19143707-19143760)
chr7 (154-207)||(20743106-20743159)
chr7 (221-267)||(12733621-12733667)
chr7 (142-207)||(5265386-5265451)
chr7 (5-112)||(23022384-23022490)
chr7 (53-114)||(1775389-1775450)
chr7 (304-384)||(48358212-48358291)
[»] chr4 (33 HSPs)
chr4 (1-443)||(11449187-11449642)
chr4 (193-443)||(11545063-11545312)
chr4 (194-561)||(17474107-17474474)
chr4 (198-586)||(19052921-19053308)
chr4 (1-156)||(17473835-17473990)
chr4 (198-364)||(11419642-11419808)
chr4 (1-153)||(11419933-11420085)
chr4 (274-537)||(14475056-14475319)
chr4 (1-156)||(21821860-21822015)
chr4 (1-156)||(47575841-47575997)
chr4 (1-152)||(21809714-21809863)
chr4 (210-577)||(21810000-21810361)
chr4 (1-156)||(19053419-19053574)
chr4 (506-586)||(26621131-26621211)
chr4 (275-490)||(47575502-47575717)
chr4 (145-207)||(21809890-21809952)
chr4 (304-397)||(19555426-19555519)
chr4 (53-152)||(11545416-11545515)
chr4 (193-252)||(17743600-17743659)
chr4 (334-413)||(18445817-18445896)
chr4 (401-563)||(21822068-21822233)
chr4 (154-207)||(11419844-11419897)
chr4 (53-110)||(18446227-18446284)
chr4 (148-196)||(14475404-14475452)
chr4 (1-97)||(20896865-20896961)
chr4 (194-249)||(16404382-16404437)
chr4 (146-204)||(14475606-14475664)
chr4 (194-243)||(13977307-13977356)
chr4 (378-430)||(4746429-4746481)
chr4 (503-531)||(12811579-12811607)
chr4 (194-290)||(18445940-18446036)
chr4 (331-413)||(22222845-22222924)
chr4 (503-535)||(38513554-38513586)
[»] chr6 (17 HSPs)
chr6 (194-586)||(4097768-4098156)
chr6 (193-443)||(10814786-10815036)
chr6 (198-586)||(11703977-11704365)
chr6 (334-413)||(14271714-14271793)
chr6 (198-431)||(4312241-4312474)
chr6 (1-156)||(22562462-22562618)
chr6 (51-161)||(4312590-4312700)
chr6 (198-410)||(10821013-10821225)
chr6 (1-155)||(10814496-10814650)
chr6 (148-204)||(4312513-4312569)
chr6 (194-300)||(22562747-22562853)
chr6 (335-413)||(29031877-29031952)
chr6 (1-83)||(17146279-17146360)
chr6 (194-240)||(18615232-18615278)
chr6 (193-243)||(19691924-19691974)
chr6 (193-243)||(21747107-21747157)
chr6 (503-535)||(29597755-29597787)
[»] chr1 (36 HSPs)
chr1 (193-586)||(30805842-30806229)
chr1 (193-483)||(33438739-33439032)
chr1 (245-586)||(12397521-12397864)
chr1 (193-545)||(26897805-26898158)
chr1 (194-398)||(17496646-17496850)
chr1 (194-398)||(12669098-12669302)
chr1 (1-206)||(30805605-30805809)
chr1 (193-545)||(17316398-17316738)
chr1 (216-470)||(19003154-19003407)
chr1 (1-160)||(26898237-26898397)
chr1 (1-204)||(17316145-17316364)
chr1 (51-156)||(12397966-12398071)
chr1 (51-156)||(22049528-22049636)
chr1 (194-267)||(22666292-22666365)
chr1 (12-156)||(33439130-33439275)
chr1 (11-114)||(15650833-15650937)
chr1 (194-430)||(19019132-19019366)
chr1 (333-466)||(15440539-15440671)
chr1 (504-586)||(19003405-19003487)
chr1 (340-430)||(24006390-24006480)
chr1 (194-254)||(15787772-15787832)
chr1 (29-113)||(31584135-31584218)
chr1 (51-114)||(12668840-12668903)
chr1 (51-114)||(15787551-15787614)
chr1 (11-129)||(22666525-22666643)
chr1 (193-238)||(12893276-12893321)
chr1 (32-114)||(22638587-22638670)
chr1 (334-397)||(37283467-37283530)
chr1 (201-314)||(17103336-17103449)
chr1 (333-431)||(31584457-31584554)
chr1 (193-243)||(21721138-21721188)
chr1 (48-114)||(37283086-37283152)
chr1 (335-430)||(14580796-14580888)
chr1 (194-243)||(20619770-20619819)
chr1 (503-535)||(2834367-2834399)
chr1 (14-78)||(17496406-17496470)
[»] chr8 (24 HSPs)
chr8 (193-457)||(28890131-28890394)
chr8 (1-156)||(23584661-23584816)
chr8 (1-156)||(24308629-24308784)
chr8 (194-364)||(23584916-23585086)
chr8 (198-284)||(24277194-24277280)
chr8 (193-364)||(23520976-23521147)
chr8 (1-156)||(25727276-25727430)
chr8 (234-456)||(25727535-25727755)
chr8 (195-262)||(25724668-25724735)
chr8 (347-490)||(29757700-29757841)
chr8 (221-364)||(26576542-26576686)
chr8 (1-115)||(25724396-25724510)
chr8 (145-195)||(28890437-28890487)
chr8 (333-457)||(29771835-29771957)
chr8 (193-238)||(34062335-34062380)
chr8 (333-427)||(7321560-7321653)
chr8 (3-156)||(28890493-28890650)
chr8 (503-534)||(25163746-25163777)
chr8 (503-586)||(28888910-28888993)
chr8 (202-244)||(6589405-6589447)
chr8 (194-252)||(10516819-10516877)
chr8 (29-114)||(13303394-13303480)
chr8 (378-443)||(18565034-18565099)
chr8 (503-535)||(17526177-17526209)
[»] chr5 (21 HSPs)
chr5 (198-453)||(22825982-22826236)
chr5 (2-137)||(26013993-26014128)
chr5 (207-364)||(37336564-37336721)
chr5 (194-398)||(24492434-24492638)
chr5 (194-586)||(24838365-24838761)
chr5 (193-399)||(26013619-26013825)
chr5 (1-155)||(24838071-24838224)
chr5 (51-121)||(30608021-30608091)
chr5 (194-398)||(30608255-30608464)
chr5 (343-456)||(31730389-31730500)
chr5 (193-262)||(27499837-27499906)
chr5 (335-462)||(25936361-25936485)
chr5 (334-413)||(6999063-6999142)
chr5 (340-413)||(9824140-9824213)
chr5 (503-582)||(26013432-26013512)
chr5 (193-252)||(22186064-22186123)
chr5 (193-284)||(26335563-26335654)
chr5 (343-430)||(28760367-28760454)
chr5 (198-241)||(37390305-37390348)
chr5 (56-114)||(24492219-24492277)
chr5 (503-586)||(30608570-30608655)
[»] scaffold0053 (1 HSPs)
scaffold0053 (189-411)||(27766-27988)
[»] scaffold0650 (2 HSPs)
scaffold0650 (29-156)||(6140-6266)
scaffold0650 (194-364)||(5822-5992)
[»] scaffold0514 (1 HSPs)
scaffold0514 (193-243)||(7283-7333)
[»] scaffold0329 (1 HSPs)
scaffold0329 (194-284)||(4332-4421)
[»] scaffold0024 (1 HSPs)
scaffold0024 (29-114)||(105370-105456)
[»] scaffold1190 (1 HSPs)
scaffold1190 (194-243)||(1309-1358)
[»] scaffold0088 (1 HSPs)
scaffold0088 (210-262)||(42181-42233)
[»] scaffold0711 (1 HSPs)
scaffold0711 (331-481)||(1760-1909)
[»] scaffold0300 (1 HSPs)
scaffold0300 (343-430)||(11980-12067)
[»] scaffold0804 (1 HSPs)
scaffold0804 (335-430)||(513-605)
[»] scaffold0146 (1 HSPs)
scaffold0146 (503-535)||(14799-14831)
[»] scaffold0003 (1 HSPs)
scaffold0003 (59-115)||(319203-319258)


Alignment Details
Target: chr2 (Bit Score: 452; Significance: 0; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 1 - 586
Target Start/End: Original strand, 27765394 - 27765999
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27765394 ttaacaaggtttgaacgtttataagaatatcagaagcacaagagaatctcaaagactatggtagaagatctgaagaaatgtcaaccagaagtcaacatct 27765493  T
Q  101 tcgatcagaagaaagaatgctacttagaagct---gaagatcttcatcagact-----------------ctgaagtacataagatcttaagggacccag 180  Q
    |||||||||||||| ||   || |||  | ||    |||||||||||||||||                 ||||||||||||||||||||||||||||||    
T  27765494 tcgatcagaagaaaaaaatatatttatcaactacataagatcttcatcagactctgaagtccatcaaactctgaagtacataagatcttaagggacccag 27765593  T
Q  181 acaccacgtcagatttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaagga 280  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  27765594 acaccacgtcagatttgtcttcttctgaccacgtgtagaaacaaacaaagaacttcaaggacagagagaatgaacggataattccggcttcaacaaagga 27765693  T
Q  281 attttgaatgtataatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttct 380  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27765694 attttgaatgtataatcaacgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacgatgacactcttct 27765793  T
Q  381 ccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaa 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27765794 ccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctgtgaaatcaa 27765893  T
Q  481 aaagcgcatataagttttagagttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgt 580  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  27765894 aaagcgcatataagttttagagttcttatcaaagtttgtatcttagaaattctaagtattatagtatgttctatattgtattatttacacctctgattgt 27765993  T
Q  581 atatca 586  Q
    ||||||    
T  27765994 atatca 27765999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 193 - 453
Target Start/End: Original strand, 35666067 - 35666324
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||| ||||| |||||| | |||||| | ||||||||||||||||| | ||||||  |||||||||| || | | ||||||||||||||  |||||     
T  35666067 atttgtcatcttccgaccacatgtagaaatagacaaagaacttcaaggaaaaagagaactaacggataattcctgttgcaacaaaggaatttcaaatgtc 35666166  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    |||||||||||||||||||||| || |||   ||  |||| ||||| |||||| |||||||||||||||||||| |||  |  | ||| |||| ||||||    
T  35666167 taatcaatgtcattatccatatgaggcaatatcccgatgtccttga-ttgaagtttctcaacgactcttaatacgatgtaa--cctcttcaacgtctctc 35666263  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctatttt 453  Q
    |||||||   |||||||||||  ||| || ||||||||| | ||||||||| | |||||||    
T  35666264 aaatccttgtctatataaggagctaacgatttgaagaacaacaacaagactctgctatttt 35666324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 28449241 - 28449401
Alignment:
Q  5 caaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcga 104  Q
    |||||| ||||||| |||||||  ||||||||||||||| || || | |||||||||||||||||||||||||| |||||| | ||||||||  ||| ||    
T  28449241 caaggtatgaacatgtataagagaatcagaagcacaagagaagctaatagactatggtagaagatctgaagaaaggtcaactagaagtcaacgccttgga 28449340  T
Q  105 tcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaagtacataaga 165  Q
    ||||||||||| | |  |||| ||| |||||||||| ||||||||||||||| ||| ||||    
T  28449341 tcagaagaaagcaagtcacttcgaacctgaagatctgcatcagactctgaagaacagaaga 28449401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16586673 - 16586827
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    ||||||||||||||| || |||||||  ||||||||||||||| || |||||| |||||||||||||||||||| ||| |||| ||  |||||||   ||    
T  16586673 ttaacaaggtttgaaaatgtataagagcatcagaagcacaagagaagctcaaatactatggtagaagatctgaa-aaaggtcagccggaagtcaaagcct 16586771  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    | ||| ||||||||| ||| |||| |||||| ||||||||| ||||||||||||||    
T  16586772 tggataagaagaaagtatgttactcagaagcagaagatctttatcagactctgaag 16586827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 194 - 357
Target Start/End: Original strand, 16587098 - 16587261
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||||||||||||||||| | || |||||||||| |||||||||||||| |||||||||| | ||||| | || ||   |||||||||||  ||||| |    
T  16587098 tttgtcttcttctgaccacatgtacaaacaaacaatgaacttcaaggacaaagagaatgaaagaataattctagtttatgcaaaggaatttcaaatgtct 16587197  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgac 357  Q
    ||||||    ||||| ||||| ||||||||||| ||  | ||||||||||||||||||||||||    
T  16587198 aatcaacagaattattcatatcagacaaagacccaacatccttgatttgaagcttctcaacgac 16587261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 21748260 - 21748323
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  21748260 aaagactatggtagaagatctgaagaaaggtcaaccacaagtcaacatcttggatcagaagaaa 21748323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 198 - 398
Target Start/End: Original strand, 21748520 - 21748720
Alignment:
Q  198 tcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatc 297  Q
    ||||||||||||||||| ||||||   ||||| ||||||||| ||| ||||||||||   || || |||| |||| |||| ||||||  ||||  || ||    
T  21748520 tcttcttctgaccacgtgtagaaattgacaaataacttcaagcacaaagagaatgaataaattattccagtttcagcaaatgaatttcaaatgactattc 21748619  T
Q  298 aatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatc 397  Q
    || |  ||||||||||| || ||| || | || || ||||||||||||||| ||||||||||||||| |  ||||||||||||| ||| |||||| ||||    
T  21748620 aacgggattatccatattaggcaatgatccaacgtccttgatttgaagcttttcaacgactcttaattcgctgacactcttctctaacgtctctcgaatc 21748719  T
Q  398 c 398  Q
    |    
T  21748720 c 21748720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 16586872 - 16586998
Alignment:
Q  29 atcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttaga 128  Q
    ||||||||||||||| || |||||| |||||||||||||||||||| ||| |||||||  |||||||   ||| ||| ||||||||| ||| |||| |||    
T  16586872 atcagaagcacaagagaaactcaaatactatggtagaagatctgaa-aaaggtcaaccggaagtcaaagccttggataagaagaaagtatgttactcaga 16586970  T
Q  129 agctgaagatcttcatcagactctgaag 156  Q
    ||| |||||| || ||||||||||||||    
T  16586971 agcagaagatttttatcagactctgaag 16586998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 16492256 - 16492361
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagact 150  Q
    ||||||||||||| || ||||||||||| |||||||| |||| |||  ||| |||||||| ||| || |||||| ||||| ||||||||| |||||||||    
T  16492256 aaagactatggtataaaatctgaagaaaggtcaaccaaaagttaacgccttagatcagaataaataaagctactcagaagttgaagatctgcatcagact 16492355  T
Q  151 ctgaag 156  Q
    ||||||    
T  16492356 ctgaag 16492361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 17417202 - 17417287
Alignment:
Q  29 atcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    ||||||||||||||| || |||||||||  |||||||||||||||||||||||||| || |||||||||  || ||||||||||||    
T  17417202 atcagaagcacaagaaaagctcaaagacattggtagaagatctgaagaaatgtcaatcagaagtcaacacattagatcagaagaaa 17417287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 18848718 - 18848605
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||| ||| ||||| ||||| || |||| |||||||||| || || | | |||||||||||||||||||||||| |||||||| ||||||||  ||    
T  18848718 ttaacaagttttaaacatctataacaacatcaaaagcacaagagaagctgagaaactatggtagaagatctgaagaaaggtcaaccagaagtcaacgcct 18848619  T
Q  101 tcgatcagaagaaa 114  Q
    | ||||||||||||    
T  18848618 tggatcagaagaaa 18848605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 19565029 - 19564944
Alignment:
Q  29 atcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    ||||||||||||||| || ||||||||||||||||||||| |||||||||  |||||||  ||||||||| || ||||||||||||    
T  19565029 atcagaagcacaagagaagctcaaagactatggtagaagacctgaagaaagttcaaccagcagtcaacatattggatcagaagaaa 19564944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 22311307 - 22311411
Alignment:
Q  11 ttgaacatttataagaatatcagaagcacaagataatctcaa-agactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcaga 109  Q
    |||||||| ||| |||  |||||||||| |||| || ||||| ||||||||||||||||||| |||||| |||||||| |||||||||| || |||||||    
T  22311307 ttgaacatctattagagcatcagaagcataagagaagctcaatagactatggtagaagatctaaagaaaggtcaaccagaagtcaacatattggatcaga 22311406  T
Q  110 agaaa 114  Q
    |||||    
T  22311407 agaaa 22311411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 193 - 364
Target Start/End: Original strand, 16917409 - 16917580
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    |||| ||||||| ||||||||| |||| |||||||| ||| |||||||||| ||||||||| |||||| |  ||| |||| |||||||||||  |||||     
T  16917409 atttttcttcttttgaccacgtgtagatacaaacaaggaatttcaaggacaaagagaatgatcggatactttcagtttcagcaaaggaatttcaaatgtc 16917508  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaat 364  Q
    ||||||| |   |||| ||||| |  |||||  ||||  | | ||||||||| |||||||||||||||||||    
T  16917509 taatcaacgaatttatacatatcatgcaaagttctaacatccgtgatttgaatcttctcaacgactcttaat 16917580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 28449478 - 28449537
Alignment:
Q  196 tgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaac 255  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||| |||||||||||    
T  28449478 tgtcttcttctgaccacgtgtagaaaccaacaaagaacttaaaggacaaagagaatgaac 28449537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 194 - 398
Target Start/End: Original strand, 25916600 - 25916803
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||| ||   |||||||||  ||| | | || |||| |||| || ||| |||||  |    
T  25916600 tttgtcttcttctgaccacgtgtagaaacaagaaaagaacttcaagggcaataagaatgaacatatacttctagtttcagcaaatgattttcgaatgact 25916699  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    |  |||    ||||||||||| || ||| | |  || || |||||||||||||||||||||||||||| ||    || |||||||||| |||||||||||    
T  25916700 atccaacagaattatccatatcaggcaatggctcaacgtccttgatttgaagcttctcaacgactctt-atctgctggcactcttctcaaacatctctca 25916798  T
Q  394 aatcc 398  Q
    |||||    
T  25916799 aatcc 25916803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 13074010 - 13073900
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||  || |||||||||||| ||  | ||||||| |||||||||||||||||||| |  || || |||||||||| |    
T  13074010 ttaacaaggtatgaacatatataagagcattagaagcacaagagaagttaaaagact-tggtagaagatctgaagaaagggaaatcagaagtcaacatgt 13073912  T
Q  101 tcgatcagaaga 112  Q
    | ||||||||||    
T  13073911 tagatcagaaga 13073900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 364
Target Start/End: Original strand, 19878060 - 19878231
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||| ||||||||||| ||  ||||||| ||||| || |||||||||| ||| |||||| ||||||| | || |  |||||||||||||  ||| |     
T  19878060 atttgtcatcttctgaccatgtggagaaacagacaaaaaaattcaaggacaaagataatgaatggataattctagttgaaacaaaggaatttcaaatatc 19878159  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaat 364  Q
    ||||||| | |||||||||||| ||  ||   || ||  | ||||||| || ||||||||||||||||||||    
T  19878160 taatcaacgacattatccatatcaggaaatatcccaaactccttgattagatgcttctcaacgactcttaat 19878231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 25564008 - 25564067
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatg 252  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||  ||| ||||||||    
T  25564008 atttgtcttcttctgaccacgtgtagaaacaaacaaagaaattcaaaaacaaagagaatg 25564067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 35665947 - 35666002
Alignment:
Q  59 tggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    |||||||||||||||||||| |||||||| |||||||||| || ||||||||||||    
T  35665947 tggtagaagatctgaagaaaagtcaaccagaagtcaacattttggatcagaagaaa 35666002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 414
Target Start/End: Original strand, 22311916 - 22311996
Alignment:
Q  334 cttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaa 414  Q
    ||||||||||||||| | || |||||||||| |  ||||||||||||||||  ||||||||||||   |||||||||||||    
T  22311916 cttgatttgaagcttgtgaatgactcttaatgcgctgacactcttctccaatgtctctcaaatccctgcctatataaggaa 22311996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 18922713 - 18922614
Alignment:
Q  11 ttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaa 110  Q
    |||||||| ||| | | ||||| |||||||||| || |||||||||  ||||||| |||||||||||| |||||||| || ||||||  || ||||||||    
T  18922713 ttgaacatgtattaaagtatcaaaagcacaagagaaactcaaagacgttggtagatgatctgaagaaaggtcaaccagaaatcaacacattagatcagaa 18922614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 20588555 - 20588613
Alignment:
Q  29 atcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaacca 87  Q
    |||||| ||| |||| || |||||||||||||||||||||||| |||||| ||||||||    
T  20588555 atcagatgcaaaagagaagctcaaagactatggtagaagatcttaagaaaggtcaacca 20588613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 21548013 - 21548099
Alignment:
Q  29 atcagaagcacaagataatctcaaa-gactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    |||||||| |||||| || |||||| |||| |||||||||||||||||||| ||||||||   ||||| ||||| || |||||||||    
T  21548013 atcagaagtacaagagaagctcaaaagactgtggtagaagatctgaagaaaggtcaaccatgggtcaaaatcttggaacagaagaaa 21548099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 398
Target Start/End: Original strand, 21548309 - 21548499
Alignment:
Q  208 accacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatcaatgtcatta 307  Q
    ||||| |||||||||| | |||  ||||||||||||    ||||||||  ||| | |||| |||||||||||| |||||||||   |  | |||  | ||    
T  21548309 accacatatagaaacagataaaagacttcaaggacaatatgaatgaacaaatacttccagtttcaacaaaggatttttgaatgaccatccgatgaaaata 21548408  T
Q  308 tccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcc 398  Q
    ||||||| || ||| | || || || ||| |||||||||||||||||||||||||||    || ||||||||||||||  |||||||||||    
T  21548409 tccatatcaggcaatggcccaacgtccttcatttgaagcttctcaacgactcttaatgtgctggcactcttctccaacgcctctcaaatcc 21548499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 42297617 - 42297667
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggaca 243  Q
    |||||||||||||||||||||| ||||||  ||||||||| ||||||||||    
T  42297617 atttgtcttcttctgaccacgtgtagaaattaacaaagaaattcaaggaca 42297667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 45622026 - 45622092
Alignment:
Q  334 cttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatccta 400  Q
    ||||||| ||| |||||||| |||||||||| ||  |||||||||||||||| ||||| ||||||||    
T  45622026 cttgattggaaacttctcaaagactcttaatgcaccgacactcttctccaacgtctcttaaatccta 45622092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 503 - 586
Target Start/End: Original strand, 16587391 - 16587475
Alignment:
Q  503 ttcttatcaaagttta-tatcttagaaattctaagtatta-gagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    |||||||||||||||  |||||||||||| |||||| ||| |||| | ||||| |||||||| |||| ||||||||||||||||||    
T  16587391 ttcttatcaaagttttgtatcttagaaatgctaagtcttaagagttt-ttctaaattgtattgtttacacctctgattgtatatca 16587475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 29409719 - 29409658
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaac 255  Q
    ||||||||||||||||||||| |||||||  ||||||||||| | || || |||||||||||    
T  29409719 tttgtcttcttctgaccacgtgtagaaacggacaaagaactttaggggcaaagagaatgaac 29409658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 17417576 - 17417640
Alignment:
Q  334 cttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcc 398  Q
    |||||| |||||||||||||| |||||| || |  || |||||||||||||| ||||||||||||    
T  17417576 cttgatatgaagcttctcaacaactctttatgcgctggcactcttctccaacgtctctcaaatcc 17417640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 397
Target Start/End: Complemental strand, 42256383 - 42256182
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||||||||| | |||||||  ||| ||||||||||||||||||| ||| |  |||||||||| |||| | |  | ||  ||||||||||  ||||| |    
T  42256383 tttgtcttcttgtaaccacgtgcagatacaaacaaagaacttcaagtacaaaaggaatgaacgggtaattctaattgcagtaaaggaatttcaaatgtct 42256284  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    ||||||||  ||||||||||  | | ||    |||| ||  ||||| |||||||||||||||| ||||||| |  |||||  ||| |||||| |||||||    
T  42256283 aatcaatgatattatccataccatataatattctaacgtctttgatgtgaagcttctcaacgaatcttaatgcgttgaca--cttgtccaacgtctctca 42256186  T
Q  394 aatc 397  Q
    ||||    
T  42256185 aatc 42256182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 413
Target Start/End: Complemental strand, 19564611 - 19564532
Alignment:
Q  334 cttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataagga 413  Q
    |||||||| |||| |||||||||||||| || |  || |||||||||||||| ||||| ||||||   ||||||||||||    
T  19564611 cttgattttaagcgtctcaacgactctttatgctctggcactcttctccaacgtctcttaaatccctgcctatataagga 19564532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 21578408 - 21578361
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacat 98  Q
    ||||| |||||||||||||||| ||||| |||||||| ||||||||||    
T  21578408 aaagattatggtagaagatctggagaaaggtcaaccagaagtcaacat 21578361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23959731 - 23959637
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaac 96  Q
    |||||||||| ||||||| |||||||   || ||||||| ||| || ||  |||||| |||||||||||||||||||| |||||| | ||||||||    
T  23959731 ttaacaaggtatgaacatgtataagagcgtctgaagcactagagaagctggaagact-tggtagaagatctgaagaaaggtcaactagaagtcaac 23959637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 534
Target Start/End: Complemental strand, 25189107 - 25189076
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattcta 534  Q
    ||||||||||||||||||||||||||||||||    
T  25189107 ttcttatcaaagtttatatcttagaaattcta 25189076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 29409973 - 29409926
Alignment:
Q  67 gatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    ||||||||||||  ||||||| ||||||||||||| ||||||||||||    
T  29409973 gatctgaagaaagttcaaccagaagtcaacatcttggatcagaagaaa 29409926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 22132010 - 22132052
Alignment:
Q  54 gactatggtagaagatctgaagaaatgtcaaccacaagtcaac 96  Q
    |||||||||||||||||||| |||| |||||||| ||||||||    
T  22132010 gactatggtagaagatctgatgaaaggtcaaccagaagtcaac 22132052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 15375959 - 15375918
Alignment:
Q  5 caaggtttgaacatttataagaatatcagaagcacaagataa 46  Q
    |||||| ||||||| ||||||| |||||||||||||||||||    
T  15375959 caaggtctgaacatatataagagtatcagaagcacaagataa 15375918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 25916344 - 25916389
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaac 96  Q
    ||||||||||||||||||||| | |||| |||||||| ||||||||    
T  25916344 aaagactatggtagaagatctaatgaaaggtcaaccagaagtcaac 25916389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 22269015 - 22268933
Alignment:
Q  29 atcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaa 113  Q
    |||||||| | |||| || || |||||||| ||||||||||||||||||| || ||||| |||||||| | || |||||||||||    
T  22269015 atcagaagtataagagaagctaaaagacta-ggtagaagatctgaagaaaggtaaaccagaagtcaac-ttttggatcagaagaa 22268933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 29409580 - 29409516
Alignment:
Q  334 cttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcc 398  Q
    |||||||||||| ||||||| |||||||||| |  || ||||||| || ||| ||||||||||||    
T  29409580 cttgatttgaagtttctcaaagactcttaatgcgctggcactcttttctaacgtctctcaaatcc 29409516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45572272 - 45572340
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45572272 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45572340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45575939 - 45576007
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45575939 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45576007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45579606 - 45579674
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45579606 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45579674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45583273 - 45583341
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45583273 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45583341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45586940 - 45587008
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45586940 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45587008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45590607 - 45590675
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45590607 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45590675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45594274 - 45594342
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45594274 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45594342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45597941 - 45598009
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45597941 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45598009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45601608 - 45601676
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45601608 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45601676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45605275 - 45605343
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45605275 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45605343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45608942 - 45609010
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45608942 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45609010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45612609 - 45612677
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45612609 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45612677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 45616276 - 45616344
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||  |||||||  ||||| |||| |||||||||||||| ||| |||| |||| |||||||||||    
T  45616276 tagaaacggacaaagacgttcaatgacaaagagaatgaacggacaattccagtttcagcaaaggaattt 45616344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 1e-58; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 193 - 586
Target Start/End: Original strand, 13291690 - 13292087
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||||||||||||||||  ||| |||||||||| |||||  |||||     
T  13291690 atttgtcttcttctgaccacgtgtagaaacaaacaaagaactccaaggacaaaaagaatgaacggataatttcagtttcaacaaagaaatttcaaatgtc 13291789  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    ||||||||  |||||||||||| ||  || | || ||||| ||||||||||| ||||||||||| ||||||| |  ||||||||||||||||| ||||||    
T  13291790 taatcaattgcattatccatatcaggaaatggcccaatgtccttgatttgaaacttctcaacgattcttaatgcgttgacactcttctccaacgtctctc 13291889  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaac-cataacaagacttttctattttaactatgctcttactctat-gaaatcaaaaagcgcata 490  Q
    |||||||  | | | ||||||  | ||||||||||||||  | || |||||| ||||||||| | | ||| |||||||| |  |||| ||||||  ||||    
T  13291890 aaatccttgcatgtgtaaggagctgaagacttgaagaacaaacaataagactcttctatttttattgtgc-cttactctgtacaaattaaaaagaacata 13291988  T
Q  491 taa-gttttaga--gttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
     ||   || |||   || ||||| |||||| ||||||||||||||||||||||||||| |||||| | ||||||| |||| | ||||||||||||||||    
T  13291989 gaacacttaagaatttttttatcgaagtttgtatcttagaaattctaagtattagagtttgttctgttttgtattgtttacatctctgattgtatatca 13292087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 201 - 586
Target Start/End: Original strand, 19306943 - 19307333
Alignment:
Q  201 tcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatcaat 300  Q
    |||||||| |||||| ||||||||||| ||||||||||||||| | | |||||||  ||||| |||  || | ||||||||||||||| ||||||||||     
T  19306943 tcttctgatcacgtacagaaacaaacatagaacttcaaggacaaaaaaaatgaactaataattccaatttgagcaaaggaattttgaacgtataatcaac 19307042  T
Q  301 gtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatccta 400  Q
      |||||||||||| ||  || | || ||  |  ||||||||||||||||||| |||||||||| || ||||||||||||||| | |||||||||||||     
T  19307043 accattatccatatcaggaaatggcccaacatctttgatttgaagcttctcaatgactcttaatgcactgacactcttctccagcgtctctcaaatcctt 19307142  T
Q  401 acctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatata--agtttt 498  Q
     ||||||||||||  | || ||||||||||| ||||||||||| |  ||||||||||| ||  ||||||| | ||||||||||||||||| |  ||||      
T  19307143 gcctatataaggactttaacacttgaagaacaataacaagactctgttattttaactacgcctttactctgtcaaatcaaaaagcgcatagaacagttaa 19307242  T
Q  499 agagttcttatcaaagtttatatcttagaaattctaagtattagagtatgttc---tatattgtattatttatacctctgattgtatatca 586  Q
      | ||||||| ||||||| ||||||||||||||||||| | ||||| | |||   | | || |||| |||| ||||||||||||||||||    
T  19307243 gaatttcttataaaagtttgtatcttagaaattctaagtttaagagtttattcaatttttttttattgtttacacctctgattgtatatca 19307333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 193 - 399
Target Start/End: Complemental strand, 10929060 - 10928854
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||| ||||||||||| || ||||||||||||| |||||||||||| | |||||||||| ||||||| |||| |||| ||| ||||||||||||||     
T  10929060 atttgtcctcttctgaccatgtgtagaaacaaacaaggaacttcaaggataaagagaatgaatggataattccagtttcagcaatggaattttgaatgtc 10928961  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    ||||||||| |||||||||||| || ||||||||||   | |||||||| ||||||||||||||||||||||    || |||||||||||||| ||| ||    
T  10928960 taatcaatggcattatccatatcaggcaaagacctatcatccttgatttcaagcttctcaacgactcttaatgtgttggcactcttctccaacgtctttc 10928861  T
Q  393 aaatcct 399  Q
    | |||||    
T  10928860 atatcct 10928854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 5554685 - 5554821
Alignment:
Q  20 tataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatg 119  Q
    |||||||  ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||| |||    
T  5554685 tataagagcatcagaagcacaagagaagctcaaagactatggtagaagatctgaagaaaggtcaaccaaaagtcaacgccttcgatcagaagaaaggatg 5554784  T
Q  120 ctacttagaagctgaagatcttcatcagactctgaag 156  Q
     |||||||||| |||||||||||||||||||||||||    
T  5554785 ttacttagaagttgaagatcttcatcagactctgaag 5554821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 193 - 455
Target Start/End: Original strand, 14427224 - 14427486
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||||| |||| ||||||| || ||||||||||||||||||||||||| ||||||||||| |||||| |||  ||||  ||||||| |||||||||     
T  14427224 atttgtctttttctaaccacgtgtataaacaaacaaagaacttcaaggacatagagaatgaacagataattccaagttcatgaaaggaaatttgaatgtc 14427323  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    || |||| | |||||||||||| ||  ||||||| ||  |||||||||||| | |||||||||| ||||||| |  || |||||||| | ||| ||||||    
T  14427324 tactcaacgacattatccatattaggaaaagacccaacattcttgatttgatgtttctcaacgaatcttaatgcgctggcactcttcactaacgtctctc 14427423  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaa 455  Q
    | |||    ||||||||| ||  | || ||||||||||| |||||||||||  ||||||||||    
T  14427424 atatcactgcctatataacgagctgaaaacttgaagaacaataacaagactcatctattttaa 14427486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 38076103 - 38076281
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||  ||||||||||||| | || || | ||||||||||||||||| |||||||| |||||||| ||||| ||| ||    
T  38076103 ttaacaaggtctgaacatgtataagagcatcagaagcacaatagaagctaatagactatggtagaagatttgaagaaaggtcaaccagaagtcgacacct 38076202  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaagtacataagatcttaagggaccca 179  Q
    | ||||||||||||| | |  ||| ||||||||||||||| ||||||||||| ||| ||| |||| |  ||||||||||    
T  38076203 tggatcagaagaaaggaagtcactcagaagctgaagatctgcatcagactctaaagaacacaagacccgaagggaccca 38076281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 193 - 284
Target Start/End: Complemental strand, 17119121 - 17119030
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||  |||||||||||    
T  17119121 atttgtcttcttctgatcacgtatagaaacaaacaaagaacttcaaggacaaagagaatgaactgataattccagtttccgcaaaggaattt 17119030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 193 - 431
Target Start/End: Original strand, 38076326 - 38076563
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    |||| ||||||| || ||| ||| |||||||||||||||||||||| || | ||| |||||||  |||||  |||  | ||||||| ||||||||||||     
T  38076326 atttatcttcttttgtccatgtagagaaacaaacaaagaacttcaaagagaaagaaaatgaacatataatttcagtgtgaacaaagaaattttgaatgtc 38076425  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
     || ||||  |||||||||||| |||||| |||  ||  | |||||||||||| || |||||||||||| ||||| | ||||||||||||||| | ||||    
T  38076426 gaaacaata-cattatccatattagacaatgactaaacatccttgatttgaagtttttcaacgactcttgatacacttacactcttctccaacgtttctc 38076524  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaac 431  Q
    ||||||| | |||| ||| ||  | ||||||||||||||    
T  38076525 aaatccttatctatgtaacgagctgaagacttgaagaac 38076563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 425 - 586
Target Start/End: Original strand, 12755821 - 12755984
Alignment:
Q  425 gaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatataagttttag--agttcttatcaaagtttatatc 522  Q
    ||||||| |||||||||||   ||||||||||||||| |||| ||||| ||||||||||||||||| ||   |||   | ||||||||||||||||||||    
T  12755821 gaagaacaataacaagactccgctattttaactatgcccttattctatcaaatcaaaaagcgcatagaacacttaagaatttcttatcaaagtttatatc 12755920  T
Q  523 ttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    ||||||||||||||| ||||||| ||||||  ||| |||| |||| || ||  |||||||||||    
T  12755921 ttagaaattctaagtcttagagtctgttctgcattctattgtttacacttcatattgtatatca 12755984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 17119387 - 17119263
Alignment:
Q  1 ttaacaaggtttgaacatttataa-gaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatc 99  Q
    ||||||| || ||||||| ||||| ||  ||||||||||||||| || || ||||||||||||||||||||||||| || |||||||| ||||||||| |    
T  17119387 ttaacaaagtctgaacatgtataaagagcatcagaagcacaagagaaacttaaagactatggtagaagatctgaaggaaggtcaaccagaagtcaacacc 17119288  T
Q  100 ttcgatcagaagaaagaatgctact 124  Q
    || ||||||||||||| ||||||||    
T  17119287 ttggatcagaagaaaggatgctact 17119263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 4515035 - 4514880
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaa-gataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatc 99  Q
    |||||||||| ||||||| |||||||  ||||||||||||| || || |  ||||||||||||||||||||| ||||||||||||||| ||||||||| |    
T  4515035 ttaacaaggtctgaacatgtataagagcatcagaagcacaaagagaagccaaaagactatggtagaagatctaaagaaatgtcaaccagaagtcaacacc 4514936  T
Q  100 ttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaa 155  Q
    || |||||  |||||| |    ||| ||||| | ||||||| ||||||||||||||    
T  4514935 ttggatcaatagaaaggaaaacactcagaagttaaagatctacatcagactctgaa 4514880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 194 - 396
Target Start/End: Original strand, 27485958 - 27486160
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||   |||||||| || || | |||| |||| ||||||| |||| ||||  |    
T  27485958 tttgtcttcttctgaccacgtgtagaaacagacaaagaacttcaaggacaataagaatgaatggttacttccagtttcagcaaaggattttttaatgact 27486057  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    |   ||    ||||| ||||| |||||| | |  ||  | |||||||||||||||||||| || |||||||||| || ||||||||| |||| |||||||    
T  27486058 atctaactgaattatacatatcagacaatggctcaacttccttgatttgaagcttctcaatgattcttaatacactggcactcttcttcaacgtctctca 27486157  T
Q  394 aat 396  Q
    |||    
T  27486158 aat 27486160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 194 - 360
Target Start/End: Complemental strand, 4514778 - 4514613
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaa-ggaattttgaatgta 292  Q
    ||||||||| ||||||||||| || |||  |||||||||||||||| ||| |||||| |||| |||||| | || | || |||| |||||||  |||| |    
T  4514778 tttgtcttcctctgaccacgtgtaaaaa--aacaaagaacttcaagtacaaagagaacgaacagataattctagttgcagcaaaaggaatttcaaatgaa 4514681  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactct 360  Q
    ||||| | | |||||||| ||| || ||||||||||| || ||||||||||| |||||||||||||||    
T  4514680 taatccacgacattatccttatcaggcaaagacctaacgtccttgatttgaaacttctcaacgactct 4514613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 378 - 586
Target Start/End: Complemental strand, 12759327 - 12759117
Alignment:
Q  378 tctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaat 477  Q
    |||| ||| ||||||| |||||  ||||||||||||  | |||||||||||||| | | ||||||| ||||| ||||| ||||| |||||||| | ||||    
T  12759327 tctcaaacgtctctcatatccttgcctatataaggagttgaagacttgaagaacaacaccaagactcttctaatttaattatgcccttactctgtcaaat 12759228  T
Q  478 caaaaagcgcatataagtttta--gagttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctg 575  Q
     |||||||||||| ||   |||   | ||||||||||||||| ||||||| ||||||| |||||| |||| |||||    | ||||| |||| ||||||     
T  12759227 aaaaaagcgcataaaacacttaagaatttcttatcaaagtttgtatcttataaattcttagtatttgagtttgttccgattagtattgtttacacctcta 12759128  T
Q  576 attgtatatca 586  Q
    |||||||||||    
T  12759127 attgtatatca 12759117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 586
Target Start/End: Complemental strand, 13363200 - 13363120
Alignment:
Q  506 ttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    ||||| |||||| ||||||||||||||||||||||||||| |||||| | ||||||| |||| | ||||||||||||||||    
T  13363200 ttatcgaagtttgtatcttagaaattctaagtattagagtttgttctgttttgtattgtttacatctctgattgtatatca 13363120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 336 - 490
Target Start/End: Original strand, 17034595 - 17034747
Alignment:
Q  336 tgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccata 435  Q
    ||||| ||||||||||||||||||||||| |  || |||   |||||||| |||||||||||||  ||||||||||||  | |||||||||||||  |||    
T  17034595 tgattcgaagcttctcaacgactcttaatgcgttgtcacc--tctccaacgtctctcaaatccttgcctatataaggagtttaagacttgaagaataata 17034692  T
Q  436 acaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcata 490  Q
    ||||||||||  |||||||||  ||  |||||||||| ||||   ||||||||||    
T  17034693 acaagactttgttattttaacggtggccttactctatcaaattctaaagcgcata 17034747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 14427034 - 14427125
Alignment:
Q  65 aagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    ||||||||||||||| ||||||| ||||||||  |||  || ||||||||| || ||||||||||| ||||||||| ||||||| |||||||    
T  14427034 aagatctgaagaaatatcaaccagaagtcaacgccttgaattagaagaaaggatactacttagaagttgaagatctacatcagaatctgaag 14427125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 4767495 - 4767585
Alignment:
Q  62 tagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactct 152  Q
    |||||||||| |||||| |||||||| ||||||||| ||| ||||||||||||  ||| |||| ||||||| ||||  |||||||||||||    
T  4767495 tagaagatctaaagaaaggtcaaccagaagtcaacaccttagatcagaagaaattatgatactcagaagctaaagactttcatcagactct 4767585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 14332643 - 14332529
Alignment:
Q  1 ttaacaaggtttgaacatttataa-gaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatc 99  Q
    |||||||||||||||||| ||||| ||  || | ||||||| || || || ||||||||||||||||||||| |||||| |||||||| ||||||||  |    
T  14332643 ttaacaaggtttgaacatgtataaagagcattataagcacatgagaagctaaaagactatggtagaagatctaaagaaaggtcaaccagaagtcaacgcc 14332544  T
Q  100 ttcgatcagaagaaa 114  Q
    || ||| ||||||||    
T  14332543 ttagataagaagaaa 14332529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 27405712 - 27405796
Alignment:
Q  12 tgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaaca 97  Q
    ||||||| ||||||| |||||||||||||||| || || |||||||  ||||||||||||||||||| || ||||| |||||||||    
T  27405712 tgaacatatataagagtatcagaagcacaagagaagctaaaagact-cggtagaagatctgaagaaaagttaaccataagtcaaca 27405796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 4767763 - 4767806
Alignment:
Q  219 aaacaaacaaagaacttcaaggacagagagaatgaacggataat 262  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  4767763 aaacaaacaaataacttcaaggacagagagaatgaacggataat 4767806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 9796530 - 9796431
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||  ||||||||||||| | || ||  ||| ||| |||||||||||||||||||  |||| || ||||||||||||    
T  9796530 ttaacaaggtctgaacatgtataagagcatcagaagcacaaaagaagctacaaggctacggtagaagatctgaagaaagttcaatcagaagtcaacatct 9796431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 10686660 - 10686601
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatg 252  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||| || ||||||||    
T  10686660 atttgtattcttctgaccacgtgtagaaacaaacaaagaaattcaagggcaaagagaatg 10686601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 16198772 - 16198851
Alignment:
Q  29 atcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcag 108  Q
    |||| ||||||| || || |||||||||| ||||||||||| |||||||| |||||||| |||||||||| || ||||||    
T  16198772 atcataagcacatgagaagctcaaagactttggtagaagatatgaagaaaggtcaaccagaagtcaacatattggatcag 16198851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 503 - 586
Target Start/End: Complemental strand, 10928744 - 10928661
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    ||||||||||||||| ||||||| ||| ||||||| ||| ||| | ||||  |||||||| |||| |||||| |||||||||||    
T  10928744 ttcttatcaaagtttgtatcttataaactctaagtcttatagtctattctgcattgtattgtttacacctcttattgtatatca 10928661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 19905714 - 19905634
Alignment:
Q  328 aatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataa 410  Q
    ||||| ||||||||||| ||||||||||||||||||| |  || ||  | |||||||| |||||||||||||| |||||||||    
T  19905714 aatgtccttgatttgaaacttctcaacgactcttaatgcgctggca--cctctccaacgtctctcaaatcctagcctatataa 19905634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 2120515 - 2120573
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatg 252  Q
    ||||||||||| ||||| |||| | |||||||||||||||||||| |||| ||||||||    
T  2120515 tttgtcttcttttgaccccgtacaaaaacaaacaaagaacttcaatgacaaagagaatg 2120573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 14252349 - 14252235
Alignment:
Q  1 ttaacaaggtttgaacatttataa-gaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatc 99  Q
    |||||||||||||||||| ||||| ||  || ||||||||  || || || ||||||||||||||||||||| |||||| |||||| | |||| |||  |    
T  14252349 ttaacaaggtttgaacatgtataaagagcattagaagcacttgagaagctaaaagactatggtagaagatctaaagaaaggtcaactagaagttaactcc 14252250  T
Q  100 ttcgatcagaagaaa 114  Q
    || ||| ||||||||    
T  14252249 tttgataagaagaaa 14252235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 17637497 - 17637543
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaag 239  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||||    
T  17637497 atttatcttcttctgaccacatgtagaaacaaacaaagaacttcaag 17637543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 19905831 - 19905770
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaac 255  Q
    |||||| ||||||||| || |||| ||||||| |||||||||||| |||| |||||||||||    
T  19905831 tttgtcatcttctgacaacatatataaacaaataaagaacttcaaagacaaagagaatgaac 19905770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 13291447 - 13291582
Alignment:
Q  12 tgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaag 111  Q
    |||||||  ||||||  ||||||||||||| |||| || |||||| | ||| || ||||| || ||| | ||| || ||||||||||||| |||||||||    
T  13291447 tgaacataaataagagcatcagaagcacaaaataaactaaaagaccaaggttgatgatctaaaaaaagg-caatcagaagtcaacatcttggatcagaag 13291545  T
Q  112 aaagaatgctacttagaagctgaagatcttcatcaga 148  Q
    |||||| |  ||  ||||| ||||||||| |||||||    
T  13291546 aaagaaagtcacgaagaagttgaagatctacatcaga 13291582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 586
Target Start/End: Complemental strand, 17118809 - 17118725
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaagt-attagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    ||||||||||||||| |  |||| ||||||||||| || ||||| |||||  ||||||||| |||| ||||||| ||||||||||    
T  17118809 ttcttatcaaagtttgttacttataaattctaagtaataagagtttgttcagtattgtattgtttacacctctggttgtatatca 17118725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 17637248 - 17637340
Alignment:
Q  3 aacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaa 95  Q
    |||||||| ||||||| || || |  |||||||||||||||||| |  ||||||||||||| ||||| |||| ||| |||||| | |||||||    
T  17637248 aacaaggtctgaacatgtacaaaagcatcagaagcacaagataagcaaaaagactatggtaaaagatatgaaaaaaggtcaacaaaaagtcaa 17637340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 534
Target Start/End: Complemental strand, 20724801 - 20724770
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattcta 534  Q
    ||||||||||||||||||||||||||||||||    
T  20724801 ttcttatcaaagtttatatcttagaaattcta 20724770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 13291593 - 13291647
Alignment:
Q  142 catcagactctgaagtacataagatcttaagggacccagacaccacgtcagattt 196  Q
    ||||||||||||||||||| |||||| | ||||||||| |  |||||||||||||    
T  13291593 catcagactctgaagtacagaagatcctgagggacccaaaagccacgtcagattt 13291647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 19906044 - 19905948
Alignment:
Q  59 tggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    ||||||||||| |||| ||| ||||| || ||||||||||||| |||||||||||||   |  ||  ||||||||||||||| ||| ||||| |||||    
T  19906044 tggtagaagatatgaa-aaaggtcaatcagaagtcaacatcttggatcagaagaaaggtagtcacgcagaagctgaagatctgcataagactttgaag 19905948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 455
Target Start/End: Complemental strand, 4514596 - 4514528
Alignment:
Q  387 tctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaa 455  Q
    |||||||||||||  ||||||||||||  | |||||||||||||  |||||| |||| | |||||||||    
T  4514596 tctctcaaatccttgcctatataaggagttgaagacttgaagaataataacatgactctgctattttaa 4514528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 360
Target Start/End: Complemental strand, 9323603 - 9323548
Alignment:
Q  304 attatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactct 360  Q
    ||||||||||| || |||||  | ||||||||||||| |||||||||||||||||||    
T  9323603 attatccatatcaggcaaagcgccaatgttcttgatt-gaagcttctcaacgactct 9323548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 14427157 - 14427193
Alignment:
Q  171 agggacccagacaccacgtcagatttgtcttcttctg 207  Q
    |||||| || |||||||||||||||||||||||||||    
T  14427157 agggactcatacaccacgtcagatttgtcttcttctg 14427193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 535
Target Start/End: Original strand, 17239368 - 17239400
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaa 535  Q
    |||||||||||||| ||||||||||||||||||    
T  17239368 ttcttatcaaagttcatatcttagaaattctaa 17239400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 535
Target Start/End: Original strand, 46350292 - 46350324
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaa 535  Q
    |||||||||||||| ||||||||||||||||||    
T  46350292 ttcttatcaaagttcatatcttagaaattctaa 46350324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 6e-57; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 193 - 493
Target Start/End: Complemental strand, 32957697 - 32957398
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||||| ||| ||||||| |||||| |||| |||| ||||||||||| ||||||     
T  32957697 atttgtctt-ttctgaccacatgtagaaacaaacaaagaacttcaaggacaaagataatgaacagataattccagtttcagcaaaggaatttcgaatgtc 32957599  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    ||||||| | |||||||||||| |||||| |||| ||  || |||||||||||||||| | ||||||| ||| |  ||||||||||||||||| |||||     
T  32957598 taatcaacgacattatccatatcagacaatgacccaacattattgatttgaagcttcttagcgactctaaatgcgctgacactcttctccaacgtctctt 32957499  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatata 492  Q
    |  ||||  |||||||||| |    |||||||||||||| ||||||||||| | ||||||||| | ||  |||||| | | |||||||||||||||||||    
T  32957498 atttccttgcctatataagaagcagaagacttgaagaacaataacaagactctactattttaattgtgtccttactttgtcaaatcaaaaagcgcatata 32957399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 194 - 586
Target Start/End: Complemental strand, 19142357 - 19141964
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||  |||| |||  |||||||||||||||||| |    
T  19142357 tttgtcctcttctaaccacgtatagaaacaaacaaggaacttcaaggaca--gagaatgaatggataactccagtttctccaaaggaattttgaatgtct 19142260  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    |||||| | ||||||||||||     || |   ||  || |||||||||| ||||  |||||||||| ||| |  || |||||||||||||| |||||||    
T  19142259 aatcaacggcattatccatatcttgtaatgttttatcgtccttgatttgatgctttccaacgactctaaatccgttggcactcttctccaacgtctctca 19142160  T
Q  394 aatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttcta-ttttaactatgctcttactctatgaaatcaaaaagcgcatata 492  Q
     |||||   | |||||| ||  | |||||||||||||  ||||||||||| | ||| |||||| | || | ||||||||| ||||||||||| ||||  |    
T  19142159 tatccttgtcaatataatgagttgaagacttgaagaataataacaagactctgctatttttaattgtgtttttactctatcaaatcaaaaagtgcatcga 19142060  T
Q  493 a-gttttagag-ttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    |   || |||| ||||| ||||||||| ||||||||||||||||||| ||| ||| ||||||| |||||||| |||| ||||||||||||||||||    
T  19142059 acacttaagagtttcttttcaaagtttgtatcttagaaattctaagtcttatagtttgttctacattgtattgtttacacctctgattgtatatca 19141964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 194 - 586
Target Start/End: Complemental strand, 20741756 - 20741363
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||  |||| |||  |||||||||||||||||| |    
T  20741756 tttgtcctcttctaaccacgtatagaaacaaacaaggaacttcaaggaca--gagaatgaatggataactccagtttctccaaaggaattttgaatgtct 20741659  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    |||||| | ||||||||||||     || |   ||  || |||||||||| ||||  |||||||||| ||| |  || |||||||||||||| |||||||    
T  20741658 aatcaacggcattatccatatcttgtaatgttttatcgtccttgatttgatgctttccaacgactctaaatccgttggcactcttctccaacgtctctca 20741559  T
Q  394 aatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttcta-ttttaactatgctcttactctatgaaatcaaaaagcgcatata 492  Q
     |||||   | |||||| ||  | |||||||||||||  ||||||||||| | ||| |||||| | || | ||||||||| ||||||||||| ||||  |    
T  20741558 tatccttgtcaatataatgagttgaagacttgaagaataataacaagactctgctatttttaattgtgtttttactctatcaaatcaaaaagtgcatcga 20741459  T
Q  493 a-gttttagag-ttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    |   || |||| ||||| ||||||||| ||||||||||||||||||| ||| ||| ||||||| |||||||| |||| ||||||||||||||||||    
T  20741458 acacttaagagtttcttttcaaagtttgtatcttagaaattctaagtcttatagtttgttctacattgtattgtttacacctctgattgtatatca 20741363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 184 - 540
Target Start/End: Original strand, 17891348 - 17891705
Alignment:
Q  184 ccacgtcagatttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaatt 283  Q
    |||||||| ||||||| | |  ||||||||| ||||||||||||||||| |||||||||| ||| |||||| ||||||| |||| |||| ||||||||||    
T  17891348 ccacgtcaaatttgtcctttgttgaccacgtgtagaaacaaacaaagaatttcaaggacaaagataatgaatggataattccag-ttcagcaaaggaatt 17891446  T
Q  284 ttgaatgtataatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctcca 383  Q
    |  ||||| |||||||   |||||||||||| ||  || | || ||  | |||||||||||||||||||  |||||||||| |  |||||||||||||||    
T  17891447 tcaaatgtctaatcaacaacattatccatatcaggtaatggcccaacatccttgatttgaagcttctcagtgactcttaatgcgttgacactcttctcca 17891546  T
Q  384 acatctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaa 483  Q
    || |||||||||||||  | ||||||||||  | |||||||||||||| | ||||||||| |  ||| |||||| ||   ||||||| | ||||||||||    
T  17891547 acgtctctcaaatccttgcttatataaggagttgaagacttgaagaacaacaacaagactctgatatattaactgtgtctttactctgtcaaatcaaaaa 17891646  T
Q  484 gcgcatataagtttta--gagttcttatcaaagtttatatcttagaaattctaagtatt 540  Q
    ||||||||||   |||   | ||||||| ||||||| ||||||| ||||||||| ||||    
T  17891647 gcgcatataacacttaagaatttcttattaaagtttgtatcttataaattctaaatatt 17891705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 193 - 585
Target Start/End: Original strand, 27707323 - 27707708
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||| |||||||||||| | ||||||||||||||||||||||| |||| | ||||| ||| ||||||  ||| || | ||| |||||||  |||||     
T  27707323 atttgtcctcttctgaccacatgtagaaacaaacaaagaacttcaaagacaaaaagaataaactgataatttcagttttagcaa-ggaatttcaaatgtc 27707421  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    |||||||||  | ||||||||| || |||||| | ||  ||||||||||||||||||||||||||||||||| ||   |||||||||||||||  |||||    
T  27707422 taatcaatggaactatccatatcaggcaaagatccaactttcttgatttgaagcttctcaacgactcttaatgcatcaacactcttctccaacgactctc 27707521  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatata 492  Q
    |||||||  || |||||||||  | |||||||||||||  |||| | |||||| ||||||||        |||||||| | |||||||||| |||||| |    
T  27707522 aaatccttgcccatataaggagctgaagacttgaagaaagataaaaggactttgctatttta--------cttactctgtcaaatcaaaaaacgcataga 27707613  T
Q  493 agtttta--gagttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatc 585  Q
    |   |||   | ||||||||||| ||| ||||||||||||  ||||| ||||| | ||||||| |||| ||| ||||   |||||||||||||||    
T  27707614 acacttaagaatttcttatcaaattttgtatcttagaaatattaagtcttagattctgttctaaattgcattttttactactctgattgtatatc 27707708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 194 - 413
Target Start/End: Original strand, 1777074 - 1777292
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||||||||||||||||||| || | ||| ||||||||||||||||||| |||||||||| || || | |||| |||| ||||||| |||  ||||       
T  1777074 tttgtcttcttctgaccacgtgtaaacacagacaaagaacttcaaggacaaagagaatgaaggggtacttccagtttcagcaaagga-tttcaaatgacc 1777172  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    | ||| ||  ||||||||||| || ||| | || || || |||||||||||||||||||||||||| ||||    ||||||||||||||||| |||||||    
T  1777173 attcattgaaattatccatattagtcaatggcccaacgtccttgatttgaagcttctcaacgactcataatgtgttgacactcttctccaacgtctctca 1777272  T
Q  394 aatcctaacctatataagga 413  Q
    |||||  |||||||||||||    
T  1777273 aatccctacctatataagga 1777292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 193 - 537
Target Start/End: Complemental strand, 1783107 - 1782761
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||| |||||||||||||| || ||| ||||||||||||||||| ||| |||||||||||||||||| || | |  |  ||||||||||  |||||     
T  1783107 atttgtcctcttctgaccacgtgtaaaaataaacaaagaacttcaagaacaaagagaatgaacggataattcccgttgtagtaaaggaatttcaaatgtc 1783008  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    ||||||| | |||| |||||||  ||||| | |  ||  | ||||||||||| ||||||  |||||||||||    |||||  ||| | ||||  |||||    
T  1783007 taatcaacgacattgtccatatccgacaatggctaaacatccttgatttgaaacttctcttcgactcttaatgtgctgaca--ctttttcaacgactctc 1782910  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataaca--agacttttctattttaactatgctcttactctatgaaatcaaaaagcgcata 490  Q
    |||| ||  ||||||||||||  | |||||||||||||| ||||||  ||||| | ||||||| ||| ||| |||||| | |||||||||||||  ||||    
T  1782909 aaattctttcctatataaggagctgaagacttgaagaacaataacaagagactctgctatttttactgtgcccttactatgtgaaatcaaaaagtccata 1782810  T
Q  491 taagtttta--gagttcttatcaaagtttatatcttagaaattctaagt 537  Q
     ||   |||   | |||||||||| |||| |||||||||||||||||||    
T  1782809 gaacacttactaatttcttatcaatgtttgtatcttagaaattctaagt 1782761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 32957951 - 32957800
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||||||||||| ||| |||  ||||||| ||| ||| || ||||||||||||||||  ||||||||||||| |||| ||| |||| ||||  |    
T  32957951 ttaacaaggtttgaacatgtatgagagcatcagaaacacgagagaagctcaaagactatggtattagatctgaagaaaggtcagccagaagttaacacat 32957852  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactct 152  Q
    | ||| ||||||||  ||| |||| ||||||||||||||| |||||||||||    
T  32957851 tggatgagaagaaaagatgttactcagaagctgaagatctacatcagactct 32957800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 216 - 362
Target Start/End: Original strand, 10646801 - 10646947
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatcaatgtcattatccatata 315  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||| |||| | ||  ||||||||||  ||||| ||||||| | |||||||||||      
T  10646801 tagaaacaaacaaagaacttcaaggacaaagagaatgaacaaataattccagttacagaaaaggaatttcaaatgtctaatcaacgacattatccataac 10646900  T
Q  316 agacaaagacctaatgttcttgatttgaagcttctcaacgactctta 362  Q
    || ||| |||| ||  | |||||||||||||||||||| ||||||||    
T  10646901 aggcaatgacccaacatccttgatttgaagcttctcaatgactctta 10646947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 27707053 - 27707194
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||  ||||||| |||||||  ||||||||||||||| || ||||||||||||||||||||||||||| ||| |||||  | |||||||| |||    
T  27707053 ttaacaaggcatgaacatgtataagagcatcagaagcacaagagaaactcaaagactatggtagaagatctgaataaaggtcaagtagaagtcaacgtct 27707152  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttc 142  Q
    | ||||| |||||||  || | || ||||| |||||||||||    
T  27707153 tggatcaaaagaaagggtgttgctcagaaggtgaagatcttc 27707194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 19143930 - 19143779
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||  || |||||||||||| |||||||||||||| || |||| || ||||||||  ||||||| |||||||   ||    
T  19143930 ttaacaaggtctgaacatgtataagagcattagaagcacaagagaatctcaaagactacggaagaatatatgaagaaagttcaaccagaagtcaatgcct 19143831  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactct 152  Q
    | ||||||||||||| |||| |||  ||| |||||| | |||||||||||||    
T  19143830 tggatcagaagaaaggatgccactccgaatctgaagtttttcatcagactct 19143779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 20743329 - 20743178
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||  || |||||||||||| |||||||||||||| || |||| || ||||||||  ||||||| |||||||   ||    
T  20743329 ttaacaaggtctgaacatgtataagagcattagaagcacaagagaatctcaaagactacggaagaatatatgaagaaagttcaaccagaagtcaatgcct 20743230  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactct 152  Q
    | ||||||||||||| |||| |||  ||| |||||| | |||||||||||||    
T  20743229 tggatcagaagaaaggatgccactccgaatctgaagtttttcatcagactct 20743178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10646558 - 10646652
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaa 95  Q
    |||||||||| ||||||| |||||||  ||||||| ||||||| || || ||||||||||||| ||||||||||||||||||||||| |||||||    
T  10646558 ttaacaaggtctgaacatgtataagagcatcagaaacacaagagaagctaaaagactatggtaaaagatctgaagaaatgtcaaccataagtcaa 10646652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 17891131 - 17891278
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcac-aagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatc 99  Q
    |||||||||| |||||   |||||||  ||||||||||| |||| || || |||||||||||||||||||||||||| ||||||||   ||||||||  |    
T  17891131 ttaacaaggtatgaactggtataagagcatcagaagcaccaagagaagctaaaagactatggtagaagatctgaagatatgtcaacttgaagtcaacgcc 17891230  T
Q  100 ttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcaga 148  Q
    || |||||||||||| || ||||||||||| |||||||||  |||||||    
T  17891231 ttggatcagaagaaacaa-gctacttagaaactgaagatccgcatcaga 17891278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 198 - 453
Target Start/End: Complemental strand, 22975376 - 22975121
Alignment:
Q  198 tcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatc 297  Q
    ||||||||| ||||| | |||||||| |||||||| ||||||| ||   ||||||||| |||| | || | |||| ||||||| |||||||||  ||       
T  22975376 tcttcttctaaccacatgtagaaacagacaaagaatttcaagggcaataagaatgaacagatacttcctgtttcagcaaaggatttttgaatgactatca 22975277  T
Q  298 aatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatc 397  Q
    |||    |||||||||| |  ||| |||  || || |||||||||||||||||||||| ||||||||    ||  |||||||||||||||||||||||||    
T  22975276 aatagatttatccatatcatgcaatgactcaacgtccttgatttgaagcttctcaacggctcttaatgtgttggaactcttctccaacatctctcaaatc 22975177  T
Q  398 ctaacctatataaggaaataaagacttgaagaaccataacaagacttttctatttt 453  Q
        ||||||||||||| ||||||| |||| ||   |||||||||||| |||||||    
T  22975176 tctgcctatataaggaattaaagacctgaaaaagattaacaagactttgctatttt 22975121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 8106014 - 8105908
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||  || ||||| |||||| || |||||| |||||||||||| ||||||||||| |||||||| |||||||| |||    
T  8106014 ttaacaaggtatgaacatgtataagagaattagaagaacaagaaaagctcaaaaactatggtagaatatctgaagaaaggtcaaccagaagtcaacgtct 8105915  T
Q  101 tcgatca 107  Q
    | |||||    
T  8105914 tggatca 8105908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15053495 - 15053293
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||| |||| |||||||||  ||  | ||||||||||||||||||| |||| |||||||||||| ||||||||  ||    
T  15053495 ttaacaaggtctgaacatgtataagaacatcataagcacaagtgaaagtaaaagactatggtagaagatatgaa-aaatgtcaaccaaaagtcaactcct 15053397  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaagtacataagatcttaagggacccagacaccacgtcagatttgtct 200  Q
    | ||||| |||||||      |||||||  |||||||   |||| ||| ||| |||  ||||||| | | ||| |||||||  |||||||||||||||||    
T  15053396 tggatcaaaagaaaggtaatcacttagactctgaaga---tcattagagtctaaagatcataagaccctgaggaacccagaagccacgtcagatttgtct 15053300  T
Q  201 tcttctg 207  Q
    |||||||    
T  15053299 tcttctg 15053293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 26822634 - 26822535
Alignment:
Q  53 agactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactct 152  Q
    |||||||||||| ||| ||||||||| |||||||| |||| |||| ||| ||||| ||||||| ||| |||| |||||||||||| | ||||||||||||    
T  26822634 agactatggtaggagagctgaagaaaggtcaaccagaagtaaacaccttggatcaaaagaaaggatgttactcagaagctgaagaacctcatcagactct 26822535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 193 - 454
Target Start/End: Complemental strand, 26822423 - 26822161
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    |||| ||||||||| || | || |||||||||||||||||||||||||||| |||||| ||| ||||||| || | ||    ||||||||||  ||||      
T  26822423 atttatcttcttctcactatgtgtagaaacaaacaaagaacttcaaggacaaagagaacgaatggataattcctgattttgtaaaggaatttcaaatggc 26822324  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactc-ttctccaacatctct 391  Q
    ||| |||    | ||||||||| || |||||    ||  |||||||||||||| || ||||||||| |||||    ||||| |  |||||||||||||||    
T  26822323 taaccaacagaactatccatatcaggcaaagggtcaacattcttgatttgaagtttttcaacgacttttaatgtgctgacatttgttctccaacatctct 26822224  T
Q  392 caaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctatttta 454  Q
    |||||| | |||||||||||||  | |||||||||||||  | ||||||||| | ||||||||    
T  26822223 caaatctttacctatataaggagttgaagacttgaagaataacaacaagactctactatttta 26822161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 7185407 - 7185494
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaag-aaagaatgctacttagaagctgaagat 138  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||  ||| |||| |||||| || ||| |||||||||||||    
T  7185407 aaagactatggtagaagatctgaa-aaatgtcaaccagaagtcaacatcttgtatcggaagaaaagaacgccactcagaagctgaagat 7185494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 8105846 - 8105787
Alignment:
Q  145 cagactctgaagtacataagatcttaagggacccagacaccacgtcagatttgtcttctt 204  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||||    
T  8105846 cagactctgaagtacagaagatcttgagggacccagacaccacatcagattagtcttctt 8105787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 1783362 - 1783248
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||  ||||||| |||||||  || |||||||||||| || || ||||||||||||  ||||||| |||||| ||||| || ||||||| || |    
T  1783362 ttaacaaggaatgaacatgtataagagcattagaagcacaagagaaactaaaagactatggttaaagatctaaagaaaggtcaatcagaagtcaatatgt 1783263  T
Q  101 tcgatcagaagaaag 115  Q
    | |||||||||||||    
T  1783262 tggatcagaagaaag 1783248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 304 - 455
Target Start/End: Complemental strand, 5265245 - 5265097
Alignment:
Q  304 attatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacc 403  Q
    ||||||||||| ||||||   || || || |||||||| |||||||||||||| | ||||| || ||||||   ||| |||| |||||||||||||  ||    
T  5265245 attatccatattagacaatatcccaacgtccttgatttaaagcttctcaacgaattttaatgca-tgacacc--tcttcaacgtctctcaaatccttgcc 5265149  T
Q  404 tatataaggaaataaagacttgaagaaccataacaagacttttctattttaa 455  Q
    ||||||||||  ||||||||||| |||  ||||||||||| | |||||||||    
T  5265148 tatataaggagctaaagacttgacgaattataacaagactctgctattttaa 5265097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 550
Target Start/End: Complemental strand, 9063819 - 9063681
Alignment:
Q  416 taaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatataagtttta-gagtt-cttatcaaa 513  Q
    ||||||||| |||||  ||||||||||| | ||||||| | | ||| |||||||| | ||||||||||||||||| ||   ||| || || |||||||||    
T  9063819 taaagacttaaagaaaaataacaagactctgctatttttattgtgcccttactctgtcaaatcaaaaagcgcataaaacacttaagattttcttatcaaa 9063720  T
Q  514 gttt--atatcttagaaattctaagtattagagtatgtt 550  Q
    ||||  ||||||||||||| |||||||||||||| ||||    
T  9063719 gtttgtatatcttagaaatgctaagtattagagtttgtt 9063681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 22975644 - 22975558
Alignment:
Q  29 atcagaagcacaagataatctcaaa-gactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    ||||||||||||| | || |||||| |||||||||| |||||||||||||| |||||||| |||| ||||| || ||||| ||||||    
T  22975644 atcagaagcacaatagaagctcaaaagactatggtaaaagatctgaagaaaggtcaaccagaagtgaacatattggatcaaaagaaa 22975558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 19143760 - 19143707
Alignment:
Q  154 aagtacataagatcttaagggacccagacaccacgtcagatttgtcttcttctg 207  Q
    |||||||||||||||| |||||||||||||| || ||||||||||| |||||||    
T  19143760 aagtacataagatcttgagggacccagacactacatcagatttgtcctcttctg 19143707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 20743159 - 20743106
Alignment:
Q  154 aagtacataagatcttaagggacccagacaccacgtcagatttgtcttcttctg 207  Q
    |||||||||||||||| |||||||||||||| || ||||||||||| |||||||    
T  20743159 aagtacataagatcttgagggacccagacactacatcagatttgtcctcttctg 20743106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 12733667 - 12733621
Alignment:
Q  221 acaaacaaagaacttcaaggacagagagaatgaacggataatcccag 267  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||||    
T  12733667 acaaacaaagaacttcaaggacaaaaagaatgaacgaataatcccag 12733621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 5265451 - 5265386
Alignment:
Q  142 catcagactctgaagtacataagatcttaagggacccagacaccacgtcagatttgtcttcttctg 207  Q
    ||||| |||| |||||||||||||   | |||||||||||  ||||||||||||||||||||||||    
T  5265451 catcaaactccgaagtacataagactctgagggacccagaagccacgtcagatttgtcttcttctg 5265386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 23022384 - 23022490
Alignment:
Q  5 caaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcga 104  Q
    |||||| ||||||| |||||||| |||| ||||| |||| || ||  |||||| ||||||||||| |||||||| |||||| | ||||||| |  || ||    
T  23022384 caaggtctgaacatatataagaacatcataagcaaaagagaagctagaagact-tggtagaagatatgaagaaaggtcaactagaagtcaaaactttgga 23022482  T
Q  105 tcagaaga 112  Q
    ||||||||    
T  23022483 tcagaaga 23022490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 1775389 - 1775450
Alignment:
Q  53 agactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    |||||||||||||| |||||||||||  ||||||| |||| || || || ||||||||||||    
T  1775389 agactatggtagaaaatctgaagaaagatcaaccagaagttaatatgttggatcagaagaaa 1775450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 384
Target Start/End: Original strand, 48358212 - 48358291
Alignment:
Q  304 attatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaa 384  Q
    ||||||||||| || |||||  | || |||||||||| |||||||||||||||||||   |||| || |||||||||||||    
T  48358212 attatccatatcaggcaaagggccaacgttcttgatt-gaagcttctcaacgactctatttacactggcactcttctccaa 48358291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 443
Target Start/End: Original strand, 11449187 - 11449642
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||| ||||| ||||||| || ||||  |||| ||||| |||| || || | ||||||||||||||||||| |||||| || || || ||||||||| ||    
T  11449187 ttaataaggtctgaacatgtaaaagagcatcaaaagcataagagaagctaatagactatggtagaagatctcaagaaaggttaatcagaagtcaacacct 11449286  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaagtacataagatcttaagggacccagacaccacgtcagatttgtc- 199  Q
    | ||||||||||||||| |  | | |||| |||||||||| ||| ||||||| ||| | | ||||||   ||||||||| |  |||| |||||||| ||     
T  11449287 tagatcagaagaaagaaagtcaatcagaacctgaagatctacattagactctaaagaatagaagatccagagggacccaaaatccacatcagatttatcc 11449386  T
Q  200 ------------ttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttga 287  Q
                |||||||||||| || |||||||||||||| ||||||||||||| ||| |||||||||||||| |||| ||||||||||||||||  |    
T  11449387 tcttatgttggcttcttctgaccatgtgtagaaacaaacaaaaaacttcaaggacaaagaaaatgaacggataattccagtttcaacaaaggaatttcaa 11449486  T
Q  288 atgtataatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacat 387  Q
    |||| ||||||||| |||||||||||| || ||| | || ||  | ||||||||||||||||||||  |||||||||   |||||||||||||||||| |    
T  11449487 atgtctaatcaatgacattatccatattaggcaatggccaaacatccttgatttgaagcttctcaattactcttaatgtgatgacactcttctccaacgt 11449586  T
Q  388 ctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagact 443  Q
    ||  |||||| |  ||||| ||||||  |||| ||||||||||| |||| ||||||    
T  11449587 ctaacaaatcattgcctatctaaggagctaaatacttgaagaacgataataagact 11449642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 193 - 443
Target Start/End: Complemental strand, 11545312 - 11545063
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||  ||| |     
T  11545312 atttgtcttcttctgaccatgtgtagaaacaaacaaaaaacttcaaggacaaagagaataaacggataattccagtttcaacaaaggaatttcaaatttt 11545213  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    ||||||||| |||||||||||| ||  || | |||||   || |||||||||||||||||||||||||||||   |||||||||||||| ||| |||  |    
T  11545212 taatcaatgacattatccatattaggtaatggcctaa-catcctgatttgaagcttctcaacgactcttaatgtgatgacactcttctcaaacgtctaac 11545114  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataacaagact 443  Q
    |||||||  ||||| ||||||  |||| ||||||||||| |||| ||||||    
T  11545113 aaatccttgcctatctaaggagctaaatacttgaagaacgataataagact 11545063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 194 - 561
Target Start/End: Original strand, 17474107 - 17474474
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    |||||| |||||| ||||||  |||||||||||||  || |||||||||  ||| |||||||  |||||  ||| ||||||||||||||||||||| | |    
T  17474107 tttgtcctcttctaaccacgg-tagaaacaaacaagaaatttcaaggacgaagaaaatgaacaaataatttcagtttcaacaaaggaattttgaatatct 17474205  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    |||||||| |||||||| |||  | |||||| | || || | ||||||||||||| ||||| | ||||||| |  |||||||||||| |||| |||||||    
T  17474206 aatcaatgacattatccctatccggcaaagatccaacgtccctgatttgaagcttttcaacaaatcttaatgcgctgacactcttcttcaacgtctctca 17474305  T
Q  394 aatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatata- 492  Q
    ||||||  |||||||||| |  |||||||||||||||  | ||||||||| | ||||||||||| ||| |||||||| | |||||||||||| || | |     
T  17474306 aatccttgcctatataagaagctaaagacttgaagaa-taaaacaagactctgctattttaactgtgcccttactctgtaaaatcaaaaagcacaaagaa 17474404  T
Q  493 -agttttagagttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtat 561  Q
     | ||  | | ||||||||||||||| |||||| |||||||||||| ||||||| ||||||| |||||||    
T  17474405 cacttacaaatttcttatcaaagtttgtatcttggaaattctaagtcttagagtttgttctacattgtat 17474474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 198 - 586
Target Start/End: Complemental strand, 19053308 - 19052921
Alignment:
Q  198 tcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatc 297  Q
    |||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||   ||||  ||  || | ||||||||||| |||| ||  |||    
T  19053308 tcttcttctgaccacgtgcagaaacaaacaaagaacttcaaggaccaagagaatgaacatgtaatttcaattttagcaaaggaatttcgaatcta--atc 19053211  T
Q  298 aatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatc 397  Q
    |||| |||||||||||| || ||| | || || |  ||||||||||||||||| |||||||||||||    || |||||||||||||| |  ||| ||||    
T  19053210 aatgacattatccatatcaggcaatggcccaacgcccttgatttgaagcttcttaacgactcttaatgtgttggcactcttctccaacgttcctctaatc 19053111  T
Q  398 ctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatataagttt 497  Q
    ||  ||||||||||||  | |||||||||||||| | ||||||||| | ||||||| ||| ||   ||||||| | ||||| ||||||||||| ||   |    
T  19053110 cttgcctatataaggagttgaagacttgaagaacaaaaacaagactctgctatttttactgtgtcattactctgtcaaatc-aaaagcgcatagaacact 19053012  T
Q  498 taga--gttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    || |   || |||||||||||| ||||||||||||||||||| || |||| ||||||   ||||||| ||||||||| |||||||| ||||    
T  19053011 taaaacttttttatcaaagtttgtatcttagaaattctaagtcttggagtctgttctgatttgtattgtttatacctatgattgtacatca 19052921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 17473835 - 17473990
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| || |||||||||||||||||||||| |||||||| |||||||| ||||||||| ||    
T  17473835 ttaacaaggtctgaacatgtataagagtatcagaagcacaagagaaactcaaagactatggtagaagatttgaagaaaggtcaaccaaaagtcaacacct 17473934  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    | ||| ||||| ||| |||||||| ||||  ||||||||| |||||||||||||||    
T  17473935 tggataagaagtaaggatgctactcagaaattgaagatctacatcagactctgaag 17473990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 11419808 - 11419642
Alignment:
Q  198 tcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatc 297  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  |||||  ||  ||||| | ||||||||  ||||| |||||    
T  11419808 tcttcttctgaccacgtgtagaaacaaacaaagaacttcaaggacaaagagaatgaacatataattacaatttcaatagaggaatttcaaatgtctaatc 11419709  T
Q  298 aatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaat 364  Q
    ||||  |||||||| || ||||||||||| ||  |||||||||||||||||| ||||||||| ||||    
T  11419708 aatggaattatccaaattagacaaagacccaacattcttgatttgaagcttcacaacgactcataat 11419642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 11420085 - 11419933
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||| |||||||| | |||| || ||||||||||||||||||||||||||||||| |||||||| |||||||   ||    
T  11420085 ttaacaaggtctgaacatgtataagaacatcagaagtagaagagaagctcaaagactatggtagaagatctgaagaaaggtcaaccagaagtcaatgcct 11419986  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctg 153  Q
      ||||||||||||| ||| | || ||||||| ||||||| ||||||||||||    
T  11419985 cagatcagaagaaaggatgtttctgagaagcttaagatctacatcagactctg 11419933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 274 - 537
Target Start/End: Complemental strand, 14475319 - 14475056
Alignment:
Q  274 caaaggaattttgaatgtataatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgaca 373  Q
    |||||||||||||||||| ||||||| | |||||||||||| || |||||| | |||||| ||||||| |||||| |||||||||||||||    || ||    
T  14475319 caaaggaattttgaatgtctaatcaacgacattatccatatcaggcaaagatccaatgtttttgatttaaagcttttcaacgactcttaatgtgttggca 14475220  T
Q  374 ctcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatg 473  Q
    ||||| || ||| |||||||||||||  ||||||||||||  |  |||||| |||||  | ||||| ||| | ||||||||||| |||   |||||  |     
T  14475219 ctcttatctaacgtctctcaaatccttgcctatataaggagctggagacttaaagaataaaaacaaaactctgctattttaactgtgcatgtactc--tc 14475122  T
Q  474 aaatcaaaaagcgcatata--agttttagagttcttatcaaagtttatatcttagaaattctaagt 537  Q
    ||||||||||| ||||| |  | ||  | | ||||||||||||||| |||||||||||||||||||    
T  14475121 aaatcaaaaagggcatagaacacttacaaatttcttatcaaagtttgtatcttagaaattctaagt 14475056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 21821860 - 21822015
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||| ||||| ||||||| |||||||  ||  |||||| |||| || ||| ||||||||||||||| || |||||||| |||||||| ||||||||  ||    
T  21821860 ttaataaggtctgaacatgtataagagaatttgaagcataagagaagctcgaagactatggtagaaaatatgaagaaaggtcaaccagaagtcaacgact 21821959  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    | ||||||||||||| |||||||| ||||||||| ||||||||| |||||||||||    
T  21821960 tggatcagaagaaaggatgctactcagaagctgatgatcttcattagactctgaag 21822015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 47575997 - 47575841
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaa-gataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatc 99  Q
    ||||||| || ||||||| |||||||  |||| |||||||| || || || |||||| ||||||||||||||||||||| |||||||| ||| |||| ||    
T  47575997 ttaacaaagtctgaacatgtataagagcatcaaaagcacaaagagaaactaaaagaccatggtagaagatctgaagaaaggtcaaccagaagacaacgtc 47575898  T
Q  100 ttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    || |||||||||||| || |||||| ||||| || |||||| |||||||||||||||    
T  47575897 ttggatcagaagaaacaaagctactcagaagttggagatctgcatcagactctgaag 47575841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 21809714 - 21809863
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| ||  |||  ||| ||||||||| | || ||||||||||||||||||| ||||||||||| |||| ||  | ||||||   |    
T  21809714 ttaacaaggtctgaacatgta--agagcatctgaagcacaaaagaagctcaaagactatggtagaaaatctgaagaaaggtcatccggacgtcaacgcat 21809811  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactct 152  Q
    | ||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  21809812 tggatcagaagaaagaatgctacatagaagctgaagatcttcatcacactct 21809863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 210 - 577
Target Start/End: Original strand, 21810000 - 21810361
Alignment:
Q  210 cacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatcaatgtcattatc 309  Q
    ||||| || ||||||||||| ||||||||||||| ||||||||||| |||||| | || || || ||| ||||||||||||| |||||||   |||||||    
T  21810000 cacgtgtaaaaacaaacaaataacttcaaggacaaagagaatgaacagataattctagtttgaataaatgaattttgaatgtctaatcaacaacattatc 21810099  T
Q  310 catataagacaaagacctaatgttcttgatttg-aagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatat 408  Q
    ||||| || |||| |||  |||  ||| ||||| ||||||||||| |||||| ||| |  | ||||||||||  ||  |||||||||||||  | |||||    
T  21810100 catatcaggcaaaaacc-catgccctttatttgaaagcttctcaaagactctaaatgcgctaacactcttcttaaatttctctcaaatccttgcatatat 21810198  T
Q  409 aaggaaataaagacttgaagaaccataacaagac-ttttctattttaactatgctcttactctatgaaatcaaaaagcgcatataagttttagagttctt 507  Q
    ||||| || |||| ||||||||  | |||||||| |||| ||||||| ||      ||||| | | |||||||||||| ||||  |       | |||||    
T  21810199 aaggagatgaagatttgaagaaagacaacaagactttttttattttacctgcatcgttactttgtcaaatcaaaaagcacataaga-------atttctt 21810291  T
Q  508 atcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgat 577  Q
    |||||||||| |||||| |||||||||||| ||||||| |||| |  |||||||| |||| |||||||||    
T  21810292 atcaaagtttgtatctttgaaattctaagtcttagagtttgttttgaattgtattgtttacacctctgat 21810361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 19053574 - 19053419
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaa-gataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatc 99  Q
    |||||||||| |||| || |||||||  ||||||||||||| || || || ||||||||| ||||||||||| |||||| || ||||| ||| ||| |||    
T  19053574 ttaacaaggtctgaaaatatataagagcatcagaagcacaaagagaagctaaaagactattgtagaagatctaaagaaaagttaaccataag-caatatc 19053476  T
Q  100 ttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    || ||||| ||||||| | || ||| ||||||||||||||| |||||||||||||||    
T  19053475 ttggatcataagaaaggaagccactcagaagctgaagatctgcatcagactctgaag 19053419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 506 - 586
Target Start/End: Original strand, 26621131 - 26621211
Alignment:
Q  506 ttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    |||||||| ||| ||||||||||||||||||||||||||  |||||| | |||||||||||| ||||||||||||||||||    
T  26621131 ttatcaaaatttgtatcttagaaattctaagtattagagcctgttctgttttgtattatttacacctctgattgtatatca 26621211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 275 - 490
Target Start/End: Complemental strand, 47575717 - 47575502
Alignment:
Q  275 aaaggaattttgaatgtataatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacac 374  Q
    ||||||||||  ||||| |||||||   |||||||||||| ||  || | || || || |||||||||||   ||||||||| |||||||    || |||    
T  47575717 aaaggaatttcaaatgtctaatcaacaacattatccatattagggaatggcccaacgtccttgatttgaattatctcaacgaatcttaatgtgttggcac 47575618  T
Q  375 tcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatga 474  Q
    ||||||||||| |||||||||||||  |||||||||  |  | || ||||||||||| | ||||||||| | ||||||||| | |||||||||||| | |    
T  47575617 tcttctccaacttctctcaaatccttccctatataaaaagctgaaaacttgaagaacgacaacaagactctactattttaaatgtgctcttactctgtca 47575518  T
Q  475 aatcaaaaagcgcata 490  Q
    | |||||||| |||||    
T  47575517 attcaaaaagtgcata 47575502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 21809890 - 21809952
Alignment:
Q  145 cagactctgaagtacataagatcttaagggacccagacaccacgtcagatttgtcttcttctg 207  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||    
T  21809890 cagactctgaagtacataagatcttgagggatccagacaccacgtaagatttgtcctcttctg 21809952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 19555426 - 19555519
Alignment:
Q  304 attatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatc 397  Q
    |||||||||||| ||||| | |  || || ||||||||||||||||||||||| |||| || | |||||||||||||||||| |||||||||||    
T  19555426 attatccatatacgacaatggctcaacgtccttgatttgaagcttctcaacgaatctttatgcgatgacactcttctccaacgtctctcaaatc 19555519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 11545515 - 11545416
Alignment:
Q  53 agactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactct 152  Q
    ||||||||||||||||||| |||||| || || || ||||||||| ||| ||||||||||||||| |  | | |||| |||||||||| |||||||||||    
T  11545515 agactatggtagaagatctcaagaaaggttaatcagaagtcaacaccttggatcagaagaaagaaagtcaatcagaacctgaagatctacatcagactct 11545416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 17743659 - 17743600
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatg 252  Q
    |||||||||||| |||||||||  |||||||||||||||| ||||| |||| ||||||||    
T  17743659 atttgtcttcttatgaccacgtgcagaaacaaacaaagaagttcaatgacaaagagaatg 17743600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 413
Target Start/End: Complemental strand, 18445896 - 18445817
Alignment:
Q  334 cttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataagga 413  Q
    |||| ||| |||||||||||||||||||||| |  | ||||| ||||||||| ||||||||||||   ||||||||||||    
T  18445896 cttggtttaaagcttctcaacgactcttaatgcgcttacactattctccaacgtctctcaaatccctgcctatataagga 18445817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 563
Target Start/End: Original strand, 21822068 - 21822233
Alignment:
Q  401 acctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcat-ataagtttta 499  Q
    |||||||||||||  | |||||||||||||  | ||||||| | || |||||||| | ||| |||||||||| |||| ||||||||||| | ||   |||    
T  21822068 acctatataaggagctgaagacttgaagaaagaaaacaagaatattttattttaattgtgcccttactctatcaaataaaaaagcgcataagaacactta 21822167  T
Q  500 --gagttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtatta 563  Q
       | ||||||||||||||| ||||||||||||| ||||| || |||| | || || |||||||||    
T  21822168 agaatttcttatcaaagtttgtatcttagaaattataagtctttgagtttattataaattgtatta 21822233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 11419897 - 11419844
Alignment:
Q  154 aagtacataagatcttaagggacccagacaccacgtcagatttgtcttcttctg 207  Q
    ||||||| |||||||| |||||||||||| ||| |||||||||||| |||||||    
T  11419897 aagtacagaagatcttgagggacccagactccatgtcagatttgtcctcttctg 11419844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 18446284 - 18446227
Alignment:
Q  53 agactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaa 110  Q
    ||||||||||||||||| |||| ||| |||||||| ||||||||||||| ||| ||||    
T  18446284 agactatggtagaagatatgaaaaaaggtcaaccagaagtcaacatcttggattagaa 18446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 14475452 - 14475404
Alignment:
Q  148 actctgaagtacataagatcttaagggacccagacaccacgtcagattt 196  Q
    ||||||||||||| |||| ||| |||||||||||||||| |||||||||    
T  14475452 actctgaagtacaaaagaacttgagggacccagacaccaagtcagattt 14475404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20896865 - 20896961
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaaca 97  Q
    |||||||||| | ||||| |||||||  |||  | |||||| | || |||||||||||||||||||||||| ||||||  | ||||| |||||||||    
T  20896865 ttaacaaggtcttaacatgtataagagcatcgaatgcacaatagaagctcaaagactatggtagaagatctaaagaaagtttaaccagaagtcaaca 20896961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 16404382 - 16404437
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagaga 249  Q
    |||||||||||||||||||||   |||||||||||| |||||||| |||| |||||    
T  16404382 tttgtcttcttctgaccacgtgctgaaacaaacaaataacttcaatgacaaagaga 16404437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 14475664 - 14475606
Alignment:
Q  146 agactctgaagtacataagatcttaagggacccagacaccacgtcagatttgtcttctt 204  Q
    |||||| |||||||| |||||||| || |||||||| ||||| || |||||||||||||    
T  14475664 agactcagaagtacaaaagatcttgagagacccagataccacatccgatttgtcttctt 14475606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 13977307 - 13977356
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggaca 243  Q
    |||| ||||||||||| ||||  |||||||||||||||||||||| ||||    
T  13977307 tttgccttcttctgactacgtgcagaaacaaacaaagaacttcaaagaca 13977356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 4746429 - 4746481
Alignment:
Q  378 tctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaa 430  Q
    |||||||| |||||||||||||  ||||||||||||  | |||||||||||||    
T  4746429 tctccaacgtctctcaaatccttgcctatataaggagcttaagacttgaagaa 4746481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 531
Target Start/End: Original strand, 12811579 - 12811607
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaatt 531  Q
    |||||||||||||||||||||||||||||    
T  12811579 ttcttatcaaagtttatatcttagaaatt 12811607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 18446036 - 18445940
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatg 290  Q
    |||||||||||||||  |||| ||||||   ||||||||| | |||||||   |||| ||||||||| | |||  |||||||||||| |||||||||    
T  18446036 tttgtcttcttctgaaaacgtgtagaaatggacaaagaacgtgaaggacaataagaaggaacggatacttccaatttcaacaaaggatttttgaatg 18445940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 413
Target Start/End: Original strand, 22222845 - 22222924
Alignment:
Q  331 gttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataagga 413  Q
    ||||||||| ||||||||||||| ||||||| ||||  || || ||||||||||   ||||||||||  |||||||| |||||    
T  22222845 gttcttgatatgaagcttctcaatgactctttatacgttggcattcttctccaa---ctctcaaatctcaacctatacaagga 22222924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 535
Target Start/End: Complemental strand, 38513586 - 38513554
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaa 535  Q
    |||||||||||||||| ||||||||||||||||    
T  38513586 ttcttatcaaagtttacatcttagaaattctaa 38513554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 194 - 586
Target Start/End: Original strand, 4097768 - 4098156
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||| ||| ||||||||| | |||||| ||||||||||||||||||||| ||||||||||| |||||| |||  ||||||||||||||||  ||| | |    
T  4097768 tttgtgttcatctgaccacatgtagaaataaacaaagaacttcaaggacaaagagaatgaaccgataattccatattcaacaaaggaatttcaaatttct 4097867  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    |||||| | |||||||||||| || |||   || || || |||||||| ||  || ||||||||||||||| |  ||||||||||||||||| ||||||     
T  4097868 aatcaaagacattatccatatcaggcaatttcccaacgtccttgatttaaaatttatcaacgactcttaatgcgttgacactcttctccaacgtctctcg 4097967  T
Q  394 aatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatataa 493  Q
    ||| ||  ||||||||||||  | |||||||||||      |||||||||||  ||| |||||| |||||||||||| | ||||||||||||||||| ||    
T  4097968 aattcttgcctatataaggagcttaagacttgaag------aacaagactttgttatattaactgtgctcttactctgtcaaatcaaaaagcgcatagaa 4098061  T
Q  494 gttttag--agttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
       ||||  | ||||||| ||| ||| ||||||||||| ||||||| | |||||||||||  | |  |||| |||| ||||||||||||||||||    
T  4098062 cgcttaggaatttcttataaaactttgtatcttagaaagtctaagtttaagagtatgttcagtttcatattgtttacacctctgattgtatatca 4098156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 193 - 443
Target Start/End: Original strand, 10814786 - 10815036
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||||  |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||  ||| |||  |||||||||||  |||||     
T  10814786 atttgtctcattctgaccacgtgtagaaacaaacaaagaacttaaaggacaaagagaatgaacggataatttcagtttctgcaaaggaatttcaaatgtc 10814885  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    |||| || |  ||||||||||| |  |||||  | ||  |||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||||||||    
T  10814886 taattaacggaattatccatatcaagcaaagggcaaacattcttgatttgaagcttctcaatgactcttaatacgttgacattcttctccaacatctctc 10814985  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataacaagact 443  Q
    |||||||  | ||||||||||  | || ||||||||||  |||||| ||||    
T  10814986 aaatccttgcatatataaggagctgaatacttgaagaataataacatgact 10815036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 198 - 586
Target Start/End: Original strand, 11703977 - 11704365
Alignment:
Q  198 tcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatc 297  Q
    |||||||| || ||| | || ||||||||||||||||||||| ||| |||||||||||| ||||| |||| |||| ||||||| |||  ||| | |||||    
T  11703977 tcttcttccgagcacatgtataaacaaacaaagaacttcaagtacaaagagaatgaacgaataattccagtttcagcaaaggattttcaaatatctaatc 11704076  T
Q  298 aatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatc 397  Q
    ||   ||||||| |||| || |||  | | || || |||||||||||||||| |||||||||| ||| |   || ||||||||| ||| | ||||| |||    
T  11704077 aacaacattatctatattaggcaataatccaacgtgcttgatttgaagcttcacaacgactctaaatgcggcgatactcttctcgaacgtttctcatatc 11704176  T
Q  398 ctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatataagttt 497  Q
    ||   |||||||||||  | ||| |||||||||| |||||||||||   ||||||||| | ||  |||||||| | ||||||||||||| ||| ||  ||    
T  11704177 cttcactatataaggagttgaaggcttgaagaacaataacaagactg--ctattttaattgtgtccttactctgtcaaatcaaaaagcgaatagaacatt 11704274  T
Q  498 ta--gagttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    ||  || |||| |||||| ||| ||||||| ||||||||||| ||||||| ||||||  |||||||| |||| |||| |||||||||||||    
T  11704275 taaggatttctcatcaaaatttgtatcttaaaaattctaagtcttagagtttgttctgaattgtattgtttacacctttgattgtatatca 11704365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 413
Target Start/End: Complemental strand, 14271793 - 14271714
Alignment:
Q  334 cttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataagga 413  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||   ||||||||||||    
T  14271793 cttgatttgaagcttctcaacgactctttatacaatgccactcttctccaacatctctcaaatccctgcctatataagga 14271714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 198 - 431
Target Start/End: Complemental strand, 4312474 - 4312241
Alignment:
Q  198 tcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatc 297  Q
    ||||||||| ||||| | |||||||||||||| |||||||||| || | | ||||| | |||||| |||| ||   |||| ||||||  ||||| |||||    
T  4312474 tcttcttctaaccacatgtagaaacaaacaaataacttcaagggcaaataaaatgaccagataattccagtttttgcaaaagaatttcaaatgtttaatc 4312375  T
Q  298 aatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatc 397  Q
    || |  | ||||||||| ||||||||    || |||||||||||||||||||||||  | ||||| | |  ||||| ||| ||||||| |||||||||||    
T  4312374 aacgaaactatccatatcagacaaagggtcaacgttcttgatttgaagcttctcaataagtcttactgcgctgacattctactccaacgtctctcaaatc 4312275  T
Q  398 ctaacctatataaggaaataaagacttgaagaac 431  Q
    ||  ||||||||| ||  | ||||||||||||||    
T  4312274 cttgcctatataaagagttgaagacttgaagaac 4312241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 22562462 - 22562618
Alignment:
Q  1 ttaacaaggtttgaacatttataa-gaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatc 99  Q
    |||| ||||| ||||||| ||||| ||  |||| || ||||||| || ||||||||||||||||||||||||||||||  ||||| |  |||||||| ||    
T  22562462 ttaaaaaggtctgaacatgtataaagagcatcataaacacaagagaagctcaaagactatggtagaagatctgaagaatggtcaaaccgaagtcaacttc 22562561  T
Q  100 ttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    || |||||||| |||| || |||||||||| |||||||   | ||||||||||||||    
T  22562562 ttggatcagaataaaggattctacttagaaactgaagactatgatcagactctgaag 22562618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 4312700 - 4312590
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagact 150  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||| ||| |||||||||||    || ||||   |||||||| ||| ||||||||||    
T  4312700 aaagactatggtagaagatctgaagaaaggtcaatcaaaagtcaacaccttggatcagaagaatagttgttactctaaagctgaaaatcctcatcagact 4312601  T
Q  151 ctgaagtacat 161  Q
    |||||| ||||    
T  4312600 ctgaagaacat 4312590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 410
Target Start/End: Complemental strand, 10821225 - 10821013
Alignment:
Q  198 tcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatc 297  Q
    ||||||||||||||||| |||||||  | |||| |||| ||||||| ||| |||||||| ||||| |||| |||| |||| ||||||  ||||  || ||    
T  10821225 tcttcttctgaccacgtgtagaaacggaaaaaggactttaaggacaaagaaaatgaacgaataattccagtttcagcaaaagaatttcaaatggctattc 10821126  T
Q  298 aatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatc 397  Q
    || |  ||||||||||| || ||| |  ||||  | | |||||  |||||| |||| |||||||||| |  |||||||||||||| || |||||||||||    
T  10821125 aacgaaattatccatatcaggcaatggtctaacatccatgattcaaagcttttcaatgactcttaatgcgctgacactcttctccgacgtctctcaaatc 10821026  T
Q  398 ctaacctatataa 410  Q
     |  |||||||||    
T  10821025 tttgcctatataa 10821013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 10814496 - 10814650
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||  |||| ||| | |||| || |||||||||||||||||||||  ||||  || |||||||| || | |||| ||    
T  10814496 ttaacaaggtctgaacatgtataagagcatcaaaagtaaaagagaagctcaaagactatggtagaagaattgaatgaaggtcaaccagaaattaacacct 10814595  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaa 155  Q
    | ||||||||||||  ||| | || |||||||||||||  | || ||||||||||    
T  10814596 tggatcagaagaaaagatgatgctcagaagctgaagattctgattagactctgaa 10814650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 4312569 - 4312513
Alignment:
Q  148 actctgaagtacataagatcttaagggacccagacaccacgtcagatttgtcttctt 204  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||||||||| ||||    
T  4312569 actcagaagtacataagatcttgagggacccagactccacgtcagatttgtcctctt 4312513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 22562747 - 22562853
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||| ||||||||||||||| ||||||||||||||  | |||||||||| ||||| |||| ||||||| |  | ||| || |||||||||  ||||| |    
T  22562747 tttgttttcttctgaccacgtgtagaaacaaacaaattaattcaaggacaaagagagtgaatggataattcatgtttctactaaggaatttcaaatgtct 22562846  T
Q  294 aatcaat 300  Q
    |||||||    
T  22562847 aatcaat 22562853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 29031952 - 29031877
Alignment:
Q  335 ttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataagga 413  Q
    |||||||||||||||| ||||||||||||| |  ||| ||   ||||||||||||||||||||||  ||||||||||||    
T  29031952 ttgatttgaagcttctgaacgactcttaatgcgctgatac---tctccaacatctctcaaatcctttcctatataagga 29031877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17146279 - 17146360
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtca 83  Q
    ||||||||||||||||||  |||||| |||||||||||||||| || || ||| |||  |||||||||| |||||||| ||||    
T  17146279 ttaacaaggtttgaacatagataagagtatcagaagcacaagagaagctaaaatact-cggtagaagatatgaagaaaggtca 17146360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 18615232 - 18615278
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaagg 240  Q
    ||||||||||| ||||||| | |||||||| ||||||||||||||||    
T  18615232 tttgtcttcttttgaccacatgtagaaacatacaaagaacttcaagg 18615278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 19691924 - 19691974
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggaca 243  Q
    ||||||| ||||||||| | || |||||||||||||||| |||||||||||    
T  19691924 atttgtcctcttctgactatgtgtagaaacaaacaaagagcttcaaggaca 19691974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 21747157 - 21747107
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggaca 243  Q
    |||| |||||||||||||||||  ||| |||||||||||||||||| ||||    
T  21747157 atttatcttcttctgaccacgtgcagatacaaacaaagaacttcaaagaca 21747107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 535
Target Start/End: Complemental strand, 29597787 - 29597755
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaa 535  Q
    |||||||||||||| ||||||||||||||||||    
T  29597787 ttcttatcaaagttcatatcttagaaattctaa 29597755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 4e-49; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 193 - 586
Target Start/End: Original strand, 30805842 - 30806229
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||| | ||| |||||||||||||| | || ||||  |||||||||| ||||||     
T  30805842 atttgtcttcttctggccacgtgtagaaacaaacaaagaacttcaaggagaaagacaatgaacggataattctagtttcatgaaaggaatttcgaatgtc 30805941  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    ||||||| | |||||||||||| || ||| |  | ||||| ||||||||||||||||||||||||||||||| |  ||||||| ||||| ||| | ||||    
T  30805942 taatcaacgacattatccatatcaggcaatggtccaatgtccttgatttgaagcttctcaacgactcttaatgcgctgacactattctcaaacgtatctc 30806041  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatata 492  Q
    ||||||   |  ||||||||||         |||||||| ||||||||| | |  ||||||   | ||| | | |||| | ||||||||||||||||| |    
T  30806042 aaatccatgcaaatataaggaa--------ctgaagaacaataacaagaatctgatatttttgttgtgcccctgctctgtcaaatcaaaaagcgcataga 30806133  T
Q  493 agtttta--gagttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    |  ||||   | ||||||||||||||| ||||||||||||||| ||| | ||||| ||||| ||||| |||| |||| |||| ||||| |||||||    
T  30806134 acatttaagaatttcttatcaaagtttgtatcttagaaattcttagtttaagagtttgttcaatattttattgtttacacctttgattttatatca 30806229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 193 - 483
Target Start/End: Complemental strand, 33439032 - 33438739
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaa--ttttgaatg 290  Q
    |||| ||||||||||||||||| || || |||||||||||||||||||||| ||| ||||| |||||||| |||| |||| ||||  ||  || ||||||    
T  33439032 atttatcttcttctgaccacgtgtataagcaaacaaagaacttcaaggacaaagataatgagcggataattccagtttcagcaaaaaaaaattatgaatg 33438933  T
Q  291 tataatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctc 390  Q
    | ||||||||| |||||||||||| || ||| |||| ||  | |||||||||||  |||||||||| ||||||| |  ||||||||||||||||| ||||    
T  33438932 tctaatcaatgacattatccatatcaggcaatgacccaacttccttgatttgaaatttctcaacgattcttaatgcgctgacactcttctccaacgtctc 33438833  T
Q  391 tcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctat-tttaactatgctcttactctatgaaatcaaaaa 483  Q
    || |||| |  | ||||||||||| | |||||||||| ||  ||||||||||| | |||| ||||||| ||| |||||||||| |||| |||||    
T  33438832 tctaatctttgcttatataaggaactgaagacttgaaaaatgataacaagactgtgctatctttaactgtgcccttactctatcaaataaaaaa 33438739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 245 - 586
Target Start/End: Complemental strand, 12397864 - 12397521
Alignment:
Q  245 agagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaa 344  Q
    ||||||||||| |||| |   ||||||| |||| ||||||  ||||| ||||||||| |||||||||||| || ||| || | ||  | |||||||||||    
T  12397864 agagaatgaacagatagttttagcttcagcaaatgaatttcaaatgtttaatcaatgacattatccatatcaggcaatgatccaacatccttgatttgaa 12397765  T
Q  345 gcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagactt 444  Q
     ||||||||||||||||||| || | |||||||||| |||| |||||||||||||  ||||||||||||  | |||||||||| ||| | |||||||||     
T  12397764 acttctcaacgactcttaatgcattaacactcttcttcaacgtctctcaaatccttgcctatataaggagctgaagacttgaacaacaacaacaagactc 12397665  T
Q  445 ttctattttaactatgctcttactctatgaaatcaaaaagcgcatataa--gttttagagttcttatcaaagtttatatcttagaaattctaagtattag 542  Q
    | ||||||| | | ||| |||||||| | ||||||||||| |  || ||   |   | | ||||||||||||||| ||| |||||||||||||||||| |    
T  12397664 tactatttttaatgtgcccttactctgtaaaatcaaaaagtgggtagaacgctgaaaaatttcttatcaaagtttgtattttagaaattctaagtatttg 12397565  T
Q  543 agtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    ||| |||||| | ||||||| |||| |||| |||||||||||||    
T  12397564 agtttgttctgttttgtattgtttacacctttgattgtatatca 12397521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 193 - 545
Target Start/End: Complemental strand, 26898158 - 26897805
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||||||| | | ||| |||  ||||| | || ||||  |||| |||||  |||||     
T  26898158 atttgtcttcttctgaccacgtgtagaaacatacaaagaactgcaaggacaaaaataattaacaaataattctagtttcagtaaagaaatttcaaatgtc 26898059  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    |||||||||  |||||||||||||| ||| |  ||||  |  ||||||| ||| |||||||||||||||||| |  |||||| ||||| |||| ||||||    
T  26898058 taatcaatgagattatccatataaggcaatggtctaacatctttgatttaaagtttctcaacgactcttaatgcgttgacacgcttcttcaacgtctctc 26897959  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatata 492  Q
    |||||||  ||||||||||||  | |||||||||||||  ||||||||||| | |||||||||||   |  ||||| | | ||||| ||||| ||||| |    
T  26897958 aaatccttgcctatataaggagttgaagacttgaagaataataacaagactctgctattttaactgcaccattactatgtcaaatc-aaaagtgcataaa 26897860  T
Q  493 agtttta--gagttcttatcaaagtttatatcttagaaattctaagtattagagt 545  Q
    |   |||   | ||||||||||||||| |||||||||||||||||||||| ||||    
T  26897859 acacttaagaatttcttatcaaagtttgtatcttagaaattctaagtatttgagt 26897805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 194 - 398
Target Start/End: Original strand, 17496646 - 17496850
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||||||||||||||||| | |||||||| |||||||| |||||||||| |||||| |||| || | |  ||| ||||||||||||||||  ||||  |    
T  17496646 tttgtcttcttctgaccacatgtagaaacatacaaagaaattcaaggacaaagagaaagaacagaaattttcagtttcaacaaaggaatttcaaatgact 17496745  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    | |||| |  ||||||||||| || ||| | |||| ||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||  |||||||    
T  17496746 attcaacgaaattatccatatcaggcaatgccctattgttcttgatttgaagcttttcaacgactcttaatgcgctgacactcttctccaatgtctctca 17496845  T
Q  394 aatcc 398  Q
    |||||    
T  17496846 aatcc 17496850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 194 - 398
Target Start/End: Original strand, 12669098 - 12669302
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||||||||||||||||| |  | ||||| ||||||||||||||||||| |||||||||| ||||| | |||| ||||| ||| ||||||||||||  |    
T  12669098 tttgtcttcttctgaccacatgcaaaaacagacaaagaacttcaaggacaaagagaatgaatggatacttccagtttcaataaaagaattttgaatgact 12669197  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    | ||||    ||||||||||| || |||  ||| || || ||||||||||||||||||||||||||| ||| |  ||||||||||| ||||| |||||||    
T  12669198 attcaaccgaattatccatatcaggcaattacccaacgtccttgatttgaagcttctcaacgactctaaatgcgttgacactcttcaccaacgtctctca 12669297  T
Q  394 aatcc 398  Q
    |||||    
T  12669298 aatcc 12669302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 30805605 - 30805809
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| | ||||| |||||||  || |||||||||||| || || ||| |||||||||||||||||||||||| |||||||| |||| |||||||    
T  30805605 ttaacaaggtctaaacatgtataagagcatgagaagcacaagagaagct-aaacactatggtagaagatctgaagaaaggtcaaccagaagtgaacatct 30805703  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaagtacataagatcttaagggacccagacaccacgtcagatttgtct 200  Q
    | ||||||||||||| |||  |||   ||||||||||||| ||||||||| ||||||||| |||||| | | |||| | ||   |||||||||||||||     
T  30805704 tggatcagaagaaaggatgtcactcgtaagctgaagatctacatcagactttgaagtacagaagatcctgatggactcggaattcacgtcagatttgtca 30805803  T
Q  201 tcttct 206  Q
    ||||||    
T  30805804 tcttct 30805809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 193 - 545
Target Start/End: Original strand, 17316398 - 17316738
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||||||||||||||| || ||||||||||||| |||||| ||||||| ||| |||||| | ||||| | || ||||| |||||||||||||||||     
T  17316398 atttgtcttcttctgaccatgtgtagaaacaaacaaggaactttaaggacaaagaaaatgaaagaataattctagtttcaaaaaaggaattttgaatgtc 17316497  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    ||||              |||| || |||||||| || |  |||||||||||| |||||||||||||||||| |  ||||||||||||||||| ||||||    
T  17316498 taat--------------atatcaggcaaagacc-aacgcccttgatttgaagattctcaacgactcttaatgcgctgacactcttctccaacgtctctc 17316582  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaacca-taacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatat 491  Q
    |||||||  |||||||||| |  | |||||||||||||| |  || | |||| | ||||||||||| | | |||||| | | |||||||||||| ||||     
T  17316583 aaatccttgcctatataagaagttgaagacttgaagaacaaccaatatgactctgctattttaactgttcccttactttgttaaatcaaaaagcccatac 17316682  T
Q  492 aagtttta--gagttcttatcaaagtttatatcttagaaattctaagtattagagt 545  Q
    ||   |||   | |||||||||||||||  ||||| |||||| ||||| |||||||    
T  17316683 aacacttaagaatttcttatcaaagttttaatctttgaaattttaagttttagagt 17316738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 216 - 470
Target Start/End: Original strand, 19003154 - 19003407
Alignment:
Q  216 tagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatcaatgtcattatccatata 315  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||  ||| || | ||||| |||||  ||||| ||||||| | |||||| |||||     
T  19003154 tagaaacaaacaaagaatttcaaggacaaagagaatgaacggataatttcagttttagcaaagaaatttcaaatgtctaatcaacgacattattcatatt 19003253  T
Q  316 agacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaa 415  Q
    ||  || |  ||||  | |||||||||||||||||||||||||||||||  |  | ||||||||| |||  ||||||||| |||  ||||||||||||      
T  19003254 aggtaatggtctaacatccttgatttgaagcttctcaacgactcttaatgtaccgccactcttcttcaatgtctctcaaaaccttgcctatataaggagt 19003353  T
Q  416 taaagacttgaagaaccataacaagacttttctattttaactatgctcttactct 470  Q
    | |||| ||||||||  | ||||||||| | ||||||||||  |||||| |||||    
T  19003354 tgaaga-ttgaagaataacaacaagactctgctattttaaccgtgctctcactct 19003407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 26898397 - 26898237
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcac-aagataatct-caaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacat 98  Q
    ||||||| || ||||| | ||||| || ||||||||||| |||| || ||  ||||||||||||||||||||  |||||| || ||||| || ||||||     
T  26898397 ttaacaaagtctgaacgtgtataaaaacatcagaagcacaaagaaaagctaaaaagactatggtagaagatccaaagaaaggttaaccataa-tcaacac 26898299  T
Q  99 cttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaagtaca 160  Q
     || |||||||||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  26898298 attagatcagaagaaacaaagctacttagaagctgaagatctgcatcagactctgaagtaca 26898237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 17316145 - 17316364
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||  |||| |||||||||| ||  |||| || | ||||| || || |||||||| |||||||| ||||||||  ||    
T  17316145 ttaacaaggtctgaacatgtataagagcatcaaaagcacaagagaagttcaa-gattgtggtaaaaaatatgaagaaaggtcaaccagaagtcaacgcct 17316243  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcat-----------------cagactctgaagtacataagatcttaagggacccagaca 183  Q
    | |||| |||||||| |||||| | ||||| |||||||||||||                 |||||||||||||||| |||||||| |||||||||||||    
T  17316244 tggatcggaagaaaggatgctaatcagaagatgaagatcttcatcagactctaaggatcatcagactctgaagtacaaaagatcttgagggacccagaca 17316343  T
Q  184 ccacgtcagatttgtcttctt 204  Q
    |||||||||||||||||||||    
T  17316344 ccacgtcagatttgtcttctt 17316364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 12398071 - 12397966
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagact 150  Q
    |||||| ||||||||||||||||||||| |||||||| |||| ||| |||| ||| |||||||| || |||||| | ||||||||||||| |||||||||    
T  12398071 aaagacaatggtagaagatctgaagaaaagtcaaccagaagtaaacgtcttggattagaagaaacaaagctactcaaaagctgaagatctgcatcagact 12397972  T
Q  151 ctgaag 156  Q
    | ||||    
T  12397971 cggaag 12397966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 22049636 - 22049528
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttagaagctgaagat---cttcatcag 147  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||||||| ||| | ||||||| |||||||| ||||  |||||||   | |||||||    
T  22049636 aaagactatggtagaagatctgaagaaaggtcaaccatatgtcaacatcttggattaaaagaaaggatgctactcagaaaatgaagattaacctcatcag 22049537  T
Q  148 actctgaag 156  Q
    |||||||||    
T  22049536 actctgaag 22049528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 22666365 - 22666292
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccag 267  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||| ||||    
T  22666365 tttgtcttcttctaaccacgtgtagaaacgaacaaagaacttcaaggacaaagagaatgaacagataattccag 22666292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 33439275 - 33439130
Alignment:
Q  12 tgaacatttataagaatatcagaagcacaa-gataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaa 110  Q
    ||||||| |||||||  ||||||||||||| || ||  | ||||||| ||||||||||||||| |||| || ||||| |||||||| |||| ||||||||    
T  33439275 tgaacatgtataagagcatcagaagcacaaagagaagttaaaagactttggtagaagatctgatgaaaggtaaaccataagtcaacgtcttggatcagaa 33439176  T
Q  111 gaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    ||||| | || ||| | ||||| ||||||| ||||||||| |||||    
T  33439175 gaaaggaagcaactcataagctaaagatctgcatcagactttgaag 33439130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 15650833 - 15650937
Alignment:
Q  11 ttgaacatttataagaatatcagaagcacaagataatctcaaa-gactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcaga 109  Q
    |||||||| ||||| |||||||||||||||||| || || ||| |||| ||||||||||| |||||| | |||||||| ||||||||||||| ||||| |    
T  15650833 ttgaacatgtataacaatatcagaagcacaagagaagcttaaaagactgtggtagaagatatgaagacaggtcaaccagaagtcaacatcttggatcaaa 15650932  T
Q  110 agaaa 114  Q
    |||||    
T  15650933 agaaa 15650937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 194 - 430
Target Start/End: Original strand, 19019132 - 19019366
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    |||||||||| |||||||| |||||||| | | ||||||||||||||||  ||||||| |||||||| | |||  |||| ||||| ||||| ||||   |    
T  19019132 tttgtcttctcctgaccacatatagaaatagataaagaacttcaaggac--agagaataaacggatacttccaatttcagcaaagaaatttcgaatagct 19019229  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    | ||||    ||||||||||| || ||| |||| ||    ||||||||||| ||||||||||| ||||||| |  || ||||||||| |||| || || |    
T  19019230 attcaacagaattatccatatcaggcaatgaccaaacacccttgatttgaatcttctcaacgattcttaatgcggtggcactcttcttcaacgtccctaa 19019329  T
Q  394 aatcctaacctatataaggaaataaagacttgaagaa 430  Q
    |||| |  |||||||||||| || ||||| |||||||    
T  19019330 aatctttgcctatataaggagatgaagacatgaagaa 19019366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 466
Target Start/End: Complemental strand, 15440671 - 15440539
Alignment:
Q  333 tcttgatttga-agcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaac 431  Q
    ||||||||||| |||||||||| |||||||||| || |||||||  |||||||  ||||||||||| |  ||||||||||||  | |||||||||||||     
T  15440671 tcttgatttgatagcttctcaaagactcttaatgcactgacact--tctccaatgtctctcaaatctttgcctatataaggagctgaagacttgaagaa- 15440575  T
Q  432 cataacaagacttttctattttaacta-tgctctta 466  Q
    || || |||||||| |||||||||||| ||||||||    
T  15440574 cacaataagactttgctattttaactagtgctctta 15440539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 19003405 - 19003487
Alignment:
Q  504 tcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    ||||||||||||||  |||||||||||| |||||||| ||||||||||  | ||||||| | || ||||||||||||||||||    
T  19003405 tcttatcaaagtttggatcttagaaattttaagtatttgagtatgttcagttttgtattgtatacacctctgattgtatatca 19003487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 430
Target Start/End: Original strand, 24006390 - 24006480
Alignment:
Q  340 ttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaa 430  Q
    ||||||||||||||||||||| | | || ||||||||||||||||| ||||||||||||  ||||||||| |||  | ||||| |||||||    
T  24006390 ttgaagcttctcaacgactctaattgcactgacactcttctccaacgtctctcaaatccctacctatatacggagttgaagacctgaagaa 24006480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 15787772 - 15787832
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaa 254  Q
    ||||||||||||||| ||||| |||||||||| |||| |||||||||||| ||||||||||    
T  15787772 tttgtcttcttctgatcacgtgtagaaacaaataaaggacttcaaggacaaagagaatgaa 15787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 31584135 - 31584218
Alignment:
Q  29 atcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaa 113  Q
    ||||||||||||||| ||  | ||||||| | ||||||||||||||||||||||||||| |||||||||| || ||||| |||||    
T  31584135 atcagaagcacaagagaaattaaaagact-tcgtagaagatctgaagaaatgtcaaccataagtcaacattttggatcataagaa 31584218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 12668840 - 12668903
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    ||||||||||||| |||||| ||||||| |||||||| ||||||| ||||| ||||||||||||    
T  12668840 aaagactatggtacaagatccgaagaaaggtcaaccaaaagtcaatatcttggatcagaagaaa 12668903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 15787551 - 15787614
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    ||||| |||||||||||||||||||||| |||||||  ||||||||||||| ||| ||||||||    
T  15787551 aaagaatatggtagaagatctgaagaaaggtcaaccgaaagtcaacatcttggattagaagaaa 15787614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 22666643 - 22666525
Alignment:
Q  11 ttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaa 110  Q
    |||||||| |||||||  || |||||||| ||| || ||  ||||||||| |||||||| |||| ||| |||||| | ||||||||||||| ||||||||    
T  22666643 ttgaacatgtataagagcattagaagcactagagaaactagaagactatgatagaagatttgaaaaaa-gtcaactagaagtcaacatcttggatcagaa 22666545  T
Q  111 g-aaagaatgctacttagaa 129  Q
    | |||| |||||||||||||    
T  22666544 gaaaaggatgctacttagaa 22666525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 12893276 - 12893321
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaa 238  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||    
T  12893276 atttgtcttcttctaaccacgtgtagaaacaaacaaagaacttcaa 12893321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 22638670 - 22638587
Alignment:
Q  32 agaagcacaagataatctcaaa-gactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    |||||||||||| ||||||||| || ||| |||||||||||||||||| |||||||| |||| ||||  || ||| ||||||||    
T  22638670 agaagcacaagagaatctcaaaagaatattgtagaagatctgaagaaaggtcaaccagaagttaacaatttggattagaagaaa 22638587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 37283467 - 37283530
Alignment:
Q  334 cttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatc 397  Q
    |||||| ||||||||||||| ||||||| || |  ||||||||||||||||| |||||||||||    
T  37283467 cttgatctgaagcttctcaatgactctttatgcgttgacactcttctccaacgtctctcaaatc 37283530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 201 - 314
Target Start/End: Original strand, 17103336 - 17103449
Alignment:
Q  201 tcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatcaat 300  Q
    |||||| ||||| | |||| ||| ||||||||||| ||||| | ||||||||||| |||||| |||| | || ||||| |||||  ||||| || |||||    
T  17103336 tcttctaaccacatgtagatacagacaaagaactttaaggataaagagaatgaacagataattccagttgcagcaaagaaatttcaaatgtctattcaat 17103435  T
Q  301 gtcattatccatat 314  Q
    | ||||||| ||||    
T  17103436 ggcattatctatat 17103449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 431
Target Start/End: Original strand, 31584457 - 31584554
Alignment:
Q  333 tcttgatttga-agcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaac 431  Q
    ||||||||||| |||||||||| |||||||||| |  |||||||  |||||||| |||||||| || |  | ||||||||||| | ||||||||||||||    
T  31584457 tcttgatttgatagcttctcaaggactcttaatgcgctgacact--tctccaacgtctctcaattcattgcatatataaggaactgaagacttgaagaac 31584554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 21721138 - 21721188
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggaca 243  Q
    |||||||||||||||| || || || | |||||||||||||||||||||||    
T  21721138 atttgtcttcttctgatcatgtgtaaatacaaacaaagaacttcaaggaca 21721188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 37283086 - 37283152
Alignment:
Q  48 ctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    ||||||||||  ||||||||||||||||||| |||||||| |||| ||||  || | ||||||||||    
T  37283086 ctcaaagacttaggtagaagatctgaagaaaggtcaaccagaagttaacacattggttcagaagaaa 37283152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 14580796 - 14580888
Alignment:
Q  335 ttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaa 430  Q
    ||||||||||| |||||||| ||||||||| |  ||||||   |||||||| ||||| |||||||  | ||||||||||  ||||||||| |||||    
T  14580796 ttgatttgaagtttctcaacaactcttaatgcgctgacac---tctccaacgtctctaaaatccttgcatatataaggagctaaagacttaaagaa 14580888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 20619819 - 20619770
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggaca 243  Q
    |||||| ||||||||| ||||  |||||||||||||||||||||| ||||    
T  20619819 tttgtcctcttctgactacgtgcagaaacaaacaaagaacttcaaagaca 20619770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 535
Target Start/End: Complemental strand, 2834399 - 2834367
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaa 535  Q
    |||||||||||||| ||||||||||||||||||    
T  2834399 ttcttatcaaagttcatatcttagaaattctaa 2834367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 17496406 - 17496470
Alignment:
Q  14 aacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaa 78  Q
    ||||| ||| |||| ||||||||||||||| ||  | ||||||||||||||||||| ||| ||||    
T  17496406 aacatgtattagaacatcagaagcacaagagaagttgaaagactatggtagaagatatgacgaaa 17496470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 193 - 457
Target Start/End: Complemental strand, 28890394 - 28890131
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||| ||||||||||| || ||||||||||||  |||||||||| ||| ||||||||||| || ||| |||  || | ||||||||||| ||||||     
T  28890394 atttgtcctcttctgaccatgtgtagaaacaaacatggaacttcaagaacaaagagaatgaacagaaaattccaattttagcaaaggaatttcgaatgtc 28890295  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    ||||||| | |||||||||||| || |||| | | ||  | ||||||||||||||||||||||||||||||| ||  | |||| ||||||||| ||| |     
T  28890294 taatcaacgacattatccatatcaggcaaaaaaccaacatccttgatttgaagcttctcaacgactcttaatgcatcggcacttttctccaacgtct-tt 28890196  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaact 457  Q
    |||||||  ||||||||||||  |||||||||| ||||| ||||||||||| | ||| |||||||    
T  28890195 aaatccttgcctatataaggagctaaagacttgtagaacaataacaagactctgctaatttaact 28890131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 23584661 - 23584816
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||| ||||||||||||| |||||||  |||| |||||||||| || ||||||||||||||||||||||||||| ||| |||||| | |||||||   ||    
T  23584661 ttaataaggtttgaacatgtataagagcatcataagcacaagagaaactcaaagactatggtagaagatctgaacaaaggtcaactagaagtcaatgcct 23584760  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    |  |||||||||||| ||| |||| ||||||||||||||| ||||||  |||||||    
T  23584761 tgaatcagaagaaaggatgatactcagaagctgaagatctacatcaggttctgaag 23584816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 24308629 - 24308784
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||||||||||| |||||||  |||||| |  ||||| ||  ||||||||||||||||||||||| |||||| |||||||| ||||||||| ||    
T  24308629 ttaacaaggtttgaacatgtataagagcatcagatgtccaagagaagatcaaagactatggtagaagatctaaagaaaggtcaaccagaagtcaacacct 24308728  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    | ||||| ||||||| |||||||| | ||| ||||||   ||||| ||||||||||    
T  24308729 tggatcaaaagaaaggatgctactcaaaagttgaagactctcatcggactctgaag 24308784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 194 - 364
Target Start/End: Original strand, 23584916 - 23585086
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||| |||||||||||||||  | | || |||||||||| |||||  |||||      
T  23584916 tttgtcttattctgaccacgtgtataaacaaacaaagaacttcaaggacaaagagaatgaacggattgttctagtttcaacaaagaaatttcaaatgtcc 23585015  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaat 364  Q
    ||||||    |||||||| || || |||||||  || ||  ||| ||||||| |||| |||||||||||||    
T  23585016 aatcaacaaaattatccaaattaggcaaagactcaacgtcgttgttttgaagattcttaacgactcttaat 23585086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 198 - 284
Target Start/End: Original strand, 24277194 - 24277280
Alignment:
Q  198 tcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    ||||||||| ||||||| ||||| |||||||| ||||||||||||| ||||||||||||||||||  ||| ||||| ||||||||||    
T  24277194 tcttcttctaaccacgtgtagaagcaaacaaataacttcaaggacaaagagaatgaacggataatttcagtttcaataaaggaattt 24277280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 193 - 364
Target Start/End: Original strand, 23520976 - 23521147
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||| |||| ||||||||| || ||||| ||||| ||||||||||||| |||||||||| ||||||| |  | | || ||||| |||||  |||||     
T  23520976 atttgtcatcttttgaccacgtgtaaaaacagacaaaaaacttcaaggacaaagagaatgaatggataattcatgttgcagcaaagtaatttcaaatgtc 23521075  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaat 364  Q
    ||||||| | |||||| ||||| ||  || | || ||  ||||||||||||| |||| ||||||||||||||    
T  23521076 taatcaacgacattattcatatcaggtaatggcccaacattcttgatttgaaacttcccaacgactcttaat 23521147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 25727276 - 25727430
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||  |||||||||| |||||||  | ||| ||| || ||||||||||||||||| ||||| || |||| ||||| |    
T  25727276 ttaacaaggtctgaacatgtataagagcatcagaagcataagataagttaaaatactttgctagaagatctgaagaaaggtcaatcagaagttaacat-t 25727374  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    |  |||||||||||| |    ||| ||||||||||||||  ||||| |||||||||    
T  25727375 ttaatcagaagaaaggagatcactcagaagctgaagatcaacatcaaactctgaag 25727430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 234 - 456
Target Start/End: Original strand, 25727535 - 25727755
Alignment:
Q  234 ttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatcaatgtcattatccatataagacaaagacctaatgtt 333  Q
    |||||||||| |||||||| | ||||||| |||  | ||  ||||||||||  ||||| ||||||| | |||||| ||||| || ||||| |||||   |    
T  25727535 ttcaaggacaaagagaatggaaggataattccaattgcagtaaaggaatttcaaatgtctaatcaacgacattattcatatcaggcaaagtcctaactat 25727634  T
Q  334 cttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaacca 433  Q
    || ||||| |||||| ||||||||||||| | || | |||  ||||| |||| ||| | ||||| | |||||||||||||| | ||||||||||| |  |    
T  25727635 ctagattttaagcttatcaacgactcttagtgcactaaca--cttctacaacgtctttaaaatcattacctatataaggaattgaagacttgaaggaata 25727732  T
Q  434 taacaagacttttctattttaac 456  Q
    |||||||||| |  |||||||||    
T  25727733 taacaagactctgttattttaac 25727755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 25724668 - 25724735
Alignment:
Q  195 ttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataat 262  Q
    |||||||||| | ||||||| |||| |||||||||||| |||||||||| |||||||||| |||||||    
T  25724668 ttgtcttcttataaccacgtgtagatacaaacaaagaatttcaaggacaaagagaatgaaaggataat 25724735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 347 - 490
Target Start/End: Original strand, 29757700 - 29757841
Alignment:
Q  347 ttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagactttt 446  Q
    ||||||| |||||||||| || ||| |||  |||||||| |||||||||||||   ||||||||||| || ||||||||||||| || ||||||||| ||    
T  29757700 ttctcaatgactcttaatgcactgatact--tctccaacgtctctcaaatccttctctatataaggagatcaagacttgaagaa-cacaacaagactctt 29757796  T
Q  447 ctattttaac-tatgctcttactctatgaaatcaaaaagcgcata 490  Q
    | | |||||| | ||| |||||||||| ||||  |||||| ||||    
T  29757797 caactttaacttgtgcccttactctatcaaatttaaaagcacata 29757841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 364
Target Start/End: Complemental strand, 26576686 - 26576542
Alignment:
Q  221 acaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatcaatgtcattatccatataagaca 320  Q
    |||||||||||||||||| |||| | |||||||||  ||||| |||| | ||||||||||||||  ||| |   ||||| | ||||||  |||| || ||    
T  26576686 acaaacaaagaacttcaaagacaaaaagaatgaacaaataattccagttgcaacaaaggaatttcaaatatcccatcaacgacattatttatatcaggca 26576587  T
Q  321 aaga-cctaatgttcttgatttgaagcttctcaacgactcttaat 364  Q
    || |  | || || |||||||||||||||||||||||||||||||    
T  26576586 aatataccaacgtccttgatttgaagcttctcaacgactcttaat 26576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25724396 - 25724510
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| | ||||| |||||||  ||||||| || |||||||  | ||| ||| ||||||||||| |||||||| ||||| || |||| ||||| |    
T  25724396 ttaacaaggtctaaacatgtataagagcatcagaaacataagataagttaaaatactttggtagaagatatgaagaaaggtcaatcagaagttaacattt 25724495  T
Q  101 tcgatcagaagaaag 115  Q
    | || ||||||||||    
T  25724496 tggaccagaagaaag 25724510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 28890487 - 28890437
Alignment:
Q  145 cagactctgaagtacataagatcttaagggacccagacaccacgtcagatt 195  Q
    |||||||| ||||||| |||||||| ||||||| |||||||||||||||||    
T  28890487 cagactctaaagtacaaaagatcttgagggacctagacaccacgtcagatt 28890437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 457
Target Start/End: Original strand, 29771835 - 29771957
Alignment:
Q  333 tcttgatttga-agcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaac 431  Q
    ||||||||||| || |||||||  ||||||||| || ||||| |  |||||||| |||||||||| ||   ||||||||||| || |||||||||||||     
T  29771835 tcttgatttgataggttctcaagaactcttaatgcactgacatt--tctccaacgtctctcaaatacttctctatataaggagatgaagacttgaagaa- 29771931  T
Q  432 cataacaagacttttctattttaact 457  Q
    || ||||||||| ||| |||||||||    
T  29771932 cacaacaagactcttcaattttaact 29771957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 34062335 - 34062380
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaa 238  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||    
T  34062335 atttgtcttcttgtgaccacgtgcagaaacaaacaaagaacttcaa 34062380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 427
Target Start/End: Original strand, 7321560 - 7321653
Alignment:
Q  333 tcttgatttgaa-gcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaa 427  Q
    |||||||||||  ||||||||| ||||||||||||  |||||||  |||||||| |||||||||||||  | |||||||| |  ||||||||||||    
T  7321560 tcttgatttgattgcttctcaaggactcttaatacgctgacact--tctccaacgtctctcaaatccttccttatataagaagttaaagacttgaa 7321653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 28890650 - 28890493
Alignment:
Q  3 aacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaat----gtcaaccacaagtcaacat 98  Q
    |||||||| || |||| |||||||  |||| ||||| |||| || |||||||| | ||||||||||| |||||||||    |||||||| || | |||      
T  28890650 aacaaggtctggacatgtataagagcatcaaaagcagaagaaaagctcaaagagtttggtagaagatatgaagaaattaaggtcaaccagaaattaacgc 28890551  T
Q  99 cttcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaag 156  Q
    ||| ||||||||| ||| ||| ||||    |||||||||||| ||||||||| |||||    
T  28890550 cttggatcagaagtaaggatgttactcgttagctgaagatctacatcagactttgaag 28890493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 534
Target Start/End: Complemental strand, 25163777 - 25163746
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattcta 534  Q
    ||||||||||||||||||||||||||||||||    
T  25163777 ttcttatcaaagtttatatcttagaaattcta 25163746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 586
Target Start/End: Complemental strand, 28888993 - 28888910
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaagtattagagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    |||||| |||||||| ||||||||||||||||||| ||||||| | || |  |||||||  |||| |||| | |||||||||||    
T  28888993 ttcttaccaaagtttgtatcttagaaattctaagtcttagagtctattatgcattgtatggtttacaccttttattgtatatca 28888910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 6589405 - 6589447
Alignment:
Q  202 cttctgaccacgtatagaaacaaacaaagaacttcaaggacag 244  Q
    |||||||||||||  ||||||||||||||||||||||| ||||    
T  6589405 cttctgaccacgtgcagaaacaaacaaagaacttcaagaacag 6589447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 10516819 - 10516877
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatg 252  Q
    |||||||||||||||||||||  |||| |||||| |||||||||| | || ||||||||    
T  10516819 tttgtcttcttctgaccacgtgcagaagcaaacatagaacttcaatggcaaagagaatg 10516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 13303480 - 13303394
Alignment:
Q  29 atcagaagcacaagataatctcaaa-gactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    |||||||||||| || || |||||| | |||||||| |||||||||||||| || ||||| || || |||| || ||||||||||||    
T  13303480 atcagaagcacatgagaagctcaaaaggctatggtataagatctgaagaaaggtaaaccagaaatccacatattggatcagaagaaa 13303394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 443
Target Start/End: Complemental strand, 18565099 - 18565034
Alignment:
Q  378 tctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagact 443  Q
    ||||||||||||||||||||||  ||||||||||||  | ||| |||||||||  | |||||||||    
T  18565099 tctccaacatctctcaaatccttgcctatataaggagctgaaggcttgaagaagaagaacaagact 18565034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 535
Target Start/End: Original strand, 17526177 - 17526209
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaa 535  Q
    |||||||||||||| ||||||||||||||||||    
T  17526177 ttcttatcaaagttcatatcttagaaattctaa 17526209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 198 - 453
Target Start/End: Complemental strand, 22826236 - 22825982
Alignment:
Q  198 tcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatc 297  Q
    ||||||||||||||||| |||||||||||||| || |||||||||| | |||||||||||||||| ||   |||  |||||||||||  ||||| |||||    
T  22826236 tcttcttctgaccacgtgtagaaacaaacaaaaaaattcaaggacaaatagaatgaacggataattcc---ttctgcaaaggaatttcaaatgtctaatc 22826140  T
Q  298 aatgtcattatccatata--agacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaa 395  Q
    ||    |||||| |||||  ||||||||   ||| |||||||||||||| ||||||||||||||||||| |  ||||| ||||||| ||||||| |||||    
T  22826139 aacagaattatcaatatatcagacaaagggttaacgttcttgatttgaaacttctcaacgactcttaatgcgctgacattcttctcaaacatctttcaaa 22826040  T
Q  396 tcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctatttt 453  Q
    ||||  ||||||||||||  | ||| |||||||||| ||||||| ||| | |||||||    
T  22826039 tccttgcctatataaggagctgaaggcttgaagaacaataacaacactctgctatttt 22825982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 26014128 - 26013993
Alignment:
Q  2 taacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatctt 101  Q
    ||||||||| ||||||| |||||||  |||| | ||| |||| |||||||||||||||| |||| ||||||||||||||||||||| ||||||||| |||    
T  26014128 taacaaggtatgaacatgtataagagcatcatatgcataagagaatctcaaagactatgatagatgatctgaagaaatgtcaaccaaaagtcaacacctt 26014029  T
Q  102 cgatcagaagaaagaatgctacttagaagctgaaga 137  Q
     ||||||||||||| |||||||| ||||||| ||||    
T  26014028 agatcagaagaaaggatgctactcagaagctaaaga 26013993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 207 - 364
Target Start/End: Complemental strand, 37336721 - 37336564
Alignment:
Q  207 gaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtataatcaatgtcatt 306  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |  | |||  |||||||||||  ||||| |||||| |   | |    
T  37336721 gaccacgtgtagaaacaaacaaagaacttcaaggacaaagagaatgaacggataattcatgtttctgcaaaggaatttcaaatgtctaatcattagaact 37336622  T
Q  307 atccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaat 364  Q
    |||||||| ||||||||    || |||||||||||||| |||||||| ||||||||||    
T  37336621 atccatatcagacaaagggtcaacgttcttgatttgaaacttctcaatgactcttaat 37336564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 194 - 398
Target Start/End: Original strand, 24492434 - 24492638
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||||||||||| ||||||| |||||||| ||||||||||| ||||||| | |||||||   |||| | |||| |||| ||||||| ||| |||||  |    
T  24492434 tttgtcttcttctaaccacgtgtagaaacagacaaagaacttaaaggacaaatagaatgattagatacttccagtttcagcaaaggattttcgaatgact 24492533  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctca 393  Q
    |  |||    ||||||||||| || | | | || || || |||||||||| | |||||||||| ||||||| |||||||||||||||| ||| |||||||    
T  24492534 atccaacagaattatccatatcaggcgatggcccaacgtccttgatttgatgtttctcaacgattcttaatgcaatgacactcttctcgaacgtctctca 24492633  T
Q  394 aatcc 398  Q
    |||||    
T  24492634 aatcc 24492638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 194 - 586
Target Start/End: Original strand, 24838365 - 24838761
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    ||||||||||| ||| | ||| || ||||||||||||||||||||||||| | |  ||||| ||||||| |||| ||| |||| |||||||  ||| | |    
T  24838365 tttgtcttcttatgatcccgtgtataaacaaacaaagaacttcaaggacaaacatgatgaatggataattccagtttctacaatggaatttcaaatttct 24838464  T
Q  294 aatcaatgtcattatccatataagacaaa-gacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
     |||||    ||||||||||| |||  || |||| || || |||||||||||||||||| | | |||||||| |  || || || |||||||| ||||||    
T  24838465 tatcaacagaattatccatatcagatgaatgacccaacgtccttgatttgaagcttctcgatgtctcttaatgcgttgtcattcctctccaacgtctctc 24838564  T
Q  393 aaatcctaacctatataaggaaataaagacttgaagaaccataacaagacttttctattttaactatgctcttactctatgaaatcaaaaagcgcatata 492  Q
    ||||| |  ||||||||||||  | ||||| | ||||   ||||||||| | | ||||||||| | ||| ||||||||   ||||  |||||| ||||||    
T  24838565 aaatctttgcctatataaggagctgaagaccttaagagtaataacaagaatctgctattttaattgtgcccttactctgccaaattgaaaagcacatata 24838664  T
Q  493 agtttt-agagt-tcttatcaaagtttatatcttagaaattctaagtatt-agagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    |    | ||| | |||||||||||| | ||||||||||||||||||| || | ||| | ||||| ||| |||| |||| ||||||||||||||||||    
T  24838665 acacctgagaatatcttatcaaagtatgtatcttagaaattctaagtcttaatagtttattctaaattatattgtttacacctctgattgtatatca 24838761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 193 - 399
Target Start/End: Complemental strand, 26013825 - 26013619
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgta 292  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| | ||||||  |||||||||| || | |||  |||||||||||  |||||     
T  26013825 atttgtcttcttctgaccatgtgtagaaacaaacaaagaacttcaaggaaaaagagaacaaacggataattcctgtttctgcaaaggaatttcaaatgtc 26013726  T
Q  293 taatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctc 392  Q
    ||  ||| |  | ||||  ||| |  |||||  | ||  |||||||||||||||||||||| ||||||||||||  |||||   ||||||||| ||| ||    
T  26013725 tagccaacggaactatctgtatcaagcaaaggaccaacattcttgatttgaagcttctcaatgactcttaatacgctgacatatttctccaacgtctttc 26013626  T
Q  393 aaatcct 399  Q
    |||||||    
T  26013625 aaatcct 26013619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 24838071 - 24838224
Alignment:
Q  1 ttaacaaggtttgaacatttataagaatatcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatct 100  Q
    |||||||||| ||||||| |||||||  |||| || ||  ||| || |||||||||||||||||||||| |||||||| ||||| || |||||||| ||     
T  24838071 ttaacaaggtctgaacatgtataagagcatcaaaaacatgagagaagctcaaagactatggtagaagatatgaagaaaggtcaagcagaagtcaac-tcc 24838169  T
Q  101 tcgatcagaagaaagaatgctacttagaagctgaagatcttcatcagactctgaa 155  Q
    | | | ||||||||  |||||||| | ||| |||||||| ||||| |||| ||||    
T  24838170 ttgttaagaagaaatgatgctactcaaaagttgaagatcctcatcggactttgaa 24838224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 30608021 - 30608091
Alignment:
Q  51 aaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgct 121  Q
    ||||||||| ||||||||| |||||||| |||||||| ||||||||||||  ||||||||||||| |||||    
T  30608021 aaagactatagtagaagatatgaagaaaggtcaaccagaagtcaacatctaggatcagaagaaaggatgct 30608091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 398
Target Start/End: Original strand, 30608255 - 30608464
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaac-----aaaggaattttgaa 288  Q
    ||||| |||||||||| || | ||||||   ||||||||||||| ||||| ||||||||||||||||||   || || | |     ||||||||||  ||    
T  30608255 tttgttttcttctgacaacatgtagaaatggacaaagaacttcatggacaaagagaatgaacggataatttgagtttaagctaagcaaaggaatttcaaa 30608354  T
Q  289 tgtataatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatc 388  Q
    || ||| |||| |  ||||||||||| ||  || |  | || || ||||||||||| ||||||||| ||||||||| | |||||||||||||||| | ||    
T  30608355 tgaatattcaacggaattatccatatcaggaaatggtccaacgtccttgatttgaaacttctcaacaactcttaatgcgatgacactcttctccatcgtc 30608454  T
Q  389 tctcaaatcc 398  Q
    ||||||||||    
T  30608455 tctcaaatcc 30608464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 343 - 456
Target Start/End: Complemental strand, 31730500 - 31730389
Alignment:
Q  343 aagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccataacaagac 442  Q
    |||||||||||||||||||||| |  ||||||   |||||||| ||||||||||| |  ||||||||||||    |||||||||| ||  ||||||||||    
T  31730500 aagcttctcaacgactcttaatgcgctgacacc--tctccaacgtctctcaaatctttgcctatataaggagccgaagacttgaacaattataacaagac 31730403  T
Q  443 ttttctattttaac 456  Q
    ||| ||||||||||    
T  31730402 tttgctattttaac 31730389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 27499906 - 27499837
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataat 262  Q
    ||||||| |||| ||||||||| |||||||| ||||| |||||||| || | ||||||||||||||||||    
T  27499906 atttgtcatcttttgaccacgtgtagaaacagacaaataacttcaaagataaagagaatgaacggataat 27499837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 462
Target Start/End: Original strand, 25936361 - 25936485
Alignment:
Q  335 ttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaaccat 434  Q
    ||||||||| ||||||||| |||||||||| |  || |||   |||||||| |||||||||||||  ||||||||||||  | |||||||||||||  |     
T  25936361 ttgatttgatgcttctcaaggactcttaatgcgttggcacc--tctccaacgtctctcaaatccttgcctatataaggagctgaagacttgaagaa-taa 25936457  T
Q  435 aacaagacttttctattttaactatgct 462  Q
    ||||||||| | | ||||||||||||||    
T  25936458 aacaagactctacaattttaactatgct 25936485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 413
Target Start/End: Original strand, 6999063 - 6999142
Alignment:
Q  334 cttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataagga 413  Q
    ||||||||||| |||||||||||||||| ||    || |||||||||||||| ||||||||||||   ||||||||||||    
T  6999063 cttgatttgaaacttctcaacgactctttatgtgttggcactcttctccaacgtctctcaaatccctgcctatataagga 6999142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 413
Target Start/End: Complemental strand, 9824213 - 9824140
Alignment:
Q  340 ttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataagga 413  Q
    |||||||||||||||||||||   | |  || ||||||||| |||||||||||||||||  |||||||||||||    
T  9824213 ttgaagcttctcaacgactctatttgcgctggcactcttcttcaacatctctcaaatccctacctatataagga 9824140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 582
Target Start/End: Complemental strand, 26013512 - 26013432
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaagtatt-agagtatgttctatattgtattatttatacctctgattgtat 582  Q
    ||||||||||||||| |||| |||||||| ||||| || ||||| |||| | | ||||||| |||| ||||||||||||||    
T  26013512 ttcttatcaaagtttgtatcatagaaattttaagtcttaagagtttgttatgtgttgtattgtttacacctctgattgtat 26013432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 22186123 - 22186064
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatg 252  Q
    ||||||||||||||||| ||||  |||||||||||||| | ||||| |||| ||||||||    
T  22186123 atttgtcttcttctgacaacgtgcagaaacaaacaaaggaattcaaagacaaagagaatg 22186064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 284
Target Start/End: Original strand, 26335563 - 26335654
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    ||||||| ||||||||||| ||  ||| ||||| ||||||| ||||||||| |   |||||||||||||| |||| | || |||||||||||    
T  26335563 atttgtcctcttctgaccatgtgcagatacaaataaagaacctcaaggacaaaagaaatgaacggataattccagttgcagcaaaggaattt 26335654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 430
Target Start/End: Complemental strand, 28760454 - 28760367
Alignment:
Q  343 aagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaa 430  Q
    ||||||||||| ||||||   | | |||||||||||||||||| ||||||||||| |  |||||| ||| || | |||||||||||||    
T  28760454 aagcttctcaatgactctatttgcgatgacactcttctccaacgtctctcaaatcattgcctataaaagcaactgaagacttgaagaa 28760367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 37390348 - 37390305
Alignment:
Q  198 tcttcttctgaccacgtatagaaacaaacaaagaacttcaagga 241  Q
    ||||||||||||||| |  |||||||||||||||||||||||||    
T  37390348 tcttcttctgaccacatgcagaaacaaacaaagaacttcaagga 37390305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 24492219 - 24492277
Alignment:
Q  56 ctatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    |||| |||||||| || |||||| ||| |||| ||||||||||||| ||||||||||||    
T  24492219 ctatagtagaagacctaaagaaaggtcgaccagaagtcaacatcttggatcagaagaaa 24492277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 586
Target Start/End: Original strand, 30608570 - 30608655
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattct-aagtatt-agagtatgttctatattgtattatttatacctctgattgtatatca 586  Q
    |||||||  |||||||||||||||||||||| |||| || ||| ||||||| ||||| |  | ||||||||||||||| |||||||    
T  30608570 ttcttatataagtttatatcttagaaattctaaagtcttaagaatatgttcaatatttttctgtttatacctctgattctatatca 30608655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 189 - 411
Target Start/End: Complemental strand, 27988 - 27766
Alignment:
Q  189 tcagatttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaa 288  Q
    |||| ||||||||| |||||||| ||||||||||| ||||| |||||||||||||   |||||||||||||| | | |  |||| ||||||| |||  ||    
T  27988 tcagttttgtcttcatctgaccatgtatagaaacagacaaataacttcaaggacaataagaatgaacggatacttctattttcagcaaaggattttcaaa 27889  T
Q  289 tgtataatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatc 388  Q
    ||  ||  |||    ||||||||||| || ||| | || || || |||||||||||||||||||||||||||||||||  || |||||||||| ||| ||    
T  27888 tgactatccaacagaattatccatatcaggcaatggcccaacgtccttgatttgaagcttctcaacgactcttaatacgttggcactcttctcaaacgtc 27789  T
Q  389 tctcaaatcctaacctatataag 411  Q
    ||||||||||   ||||||||||    
T  27788 tctcaaatccccgcctatataag 27766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 6266 - 6140
Alignment:
Q  29 atcagaagcacaagataatctcaaagactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaagaatgctacttaga 128  Q
    ||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||| ||||||||| ||| |||| |||||||| ||| |||| |||    
T  6266 atcagaagcacaagagaagctcaaagactatggtagaagatctgatgaaaggtcaaccagaagtcaacacctt-gatctgaagaaaggatgttactcaga 6168  T
Q  129 agctgaagatcttcatcagactctgaag 156  Q
    || ||||||   |||||||| |||||||    
T  6167 agttgaagactctcatcagaatctgaag 6140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 194 - 364
Target Start/End: Complemental strand, 5992 - 5822
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattttgaatgtat 293  Q
    |||||||||||||||| |||| || ||||||| ||||||||||| ||||| ||||||||||  |||||| | || |||| |||||||||||  ||||| |    
T  5992 tttgtcttcttctgacaacgtgtaaaaacaaagaaagaacttcagggacaaagagaatgaatagataattcaagtttcagcaaaggaatttcaaatgtct 5893  T
Q  294 aatcaatgtcattatccatataagacaaagacctaatgttcttgatttgaagcttctcaacgactcttaat 364  Q
    ||||||    | ||| ||||| || |||||   ||| |||||||||||||||||||| || ||||||||||    
T  5892 aatcaacagaactattcatattaggcaaagggataacgttcttgatttgaagcttctaaatgactcttaat 5822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 7333 - 7283
Alignment:
Q  193 atttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggaca 243  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  7333 atttgtcctcttctgaccacgtgcagaaacaaacaaagaacttcaaggaca 7283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 194 - 284
Target Start/End: Complemental strand, 4421 - 4332
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataatcccagcttcaacaaaggaattt 284  Q
    ||||||||||||||| |||||  ||| |||||||| |||||||||||||| |  ||||||||||||||| ||   ||||||||||||||||    
T  4421 tttgtcttcttctgatcacgtgcagatacaaacaa-gaacttcaaggacaaatggaatgaacggataattccttgttcaacaaaggaattt 4332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 105370 - 105456
Alignment:
Q  29 atcagaagcacaagataatctcaaa-gactatggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaa 114  Q
    ||||||| ||||||| || |||||| ||||||||||||||||||||||||| ||||||||  |||||||||  |  |||||||||||    
T  105370 atcagaaacacaagagaagctcaaacgactatggtagaagatctgaagaaaggtcaaccatgagtcaacatactaaatcagaagaaa 105456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 1358 - 1309
Alignment:
Q  194 tttgtcttcttctgaccacgtatagaaacaaacaaagaacttcaaggaca 243  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  1358 tttgtcctcttctgaccacgtgcagaaacaaacaaagaacttcaaggaca 1309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 42181 - 42233
Alignment:
Q  210 cacgtatagaaacaaacaaagaacttcaaggacagagagaatgaacggataat 262  Q
    ||||| |||||||||||||||||||||||||||| | |||| |||||||||||    
T  42181 cacgtgtagaaacaaacaaagaacttcaaggacaaaaagaaagaacggataat 42233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 1760 - 1909
Alignment:
Q  331 gttcttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaa 430  Q
    |||||||||| ||||||||||||| |||||   |||| ||||||||||||||||| ||||||||||     ||||||||||||  | ||||| ||||| |    
T  1760 gttcttgatt-gaagcttctcaacaactctatttacactgacactcttctccaacgtctctcaaatgactgcctatataaggagttgaagacctgaagca 1858  T
Q  431 cca-taacaagacttttctattttaactatgctcttactctatgaaatcaaa 481  Q
      | |||||||||||| | ||||| |||||||  ||||||||| ||||||||    
T  1859 gaagtaacaagactttgcaatttt-actatgccattactctatcaaatcaaa 1909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 430
Target Start/End: Complemental strand, 12067 - 11980
Alignment:
Q  343 aagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaa 430  Q
    ||||||||| ||||||||   |||| ||||||||||||||||| |||||||||||   ||||||| ||||| || || || |||||||    
T  12067 aagcttctccacgactctatttacactgacactcttctccaacgtctctcaaatcactacctataaaaggagatgaatacctgaagaa 11980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 513 - 605
Alignment:
Q  335 ttgatttgaagcttctcaacgactcttaatacaatgacactcttctccaacatctctcaaatcctaacctatataaggaaataaagacttgaagaa 430  Q
    ||||||||||| |||||||| ||||||||| |  ||||||   |||||||| ||||| |||||||  | ||||||||||  ||||||||| |||||    
T  513 ttgatttgaagtttctcaacaactcttaatgcgctgacac---tctccaacgtctctaaaatccttgcatatataaggagctaaagacttaaagaa 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 535
Target Start/End: Complemental strand, 14831 - 14799
Alignment:
Q  503 ttcttatcaaagtttatatcttagaaattctaa 535  Q
    |||||||||||||| ||||||||||||||||||    
T  14831 ttcttatcaaagttcatatcttagaaattctaa 14799  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 319203 - 319258
Alignment:
Q  59 tggtagaagatctgaagaaatgtcaaccacaagtcaacatcttcgatcagaagaaag 115  Q
    |||||||| ||||||||||| |||||||| |||||||| | || |||||||||||||    
T  319203 tggtagaacatctgaagaaaggtcaaccagaagtcaac-ttttggatcagaagaaag 319258  T

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