View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19838_low_18 (Length: 251)
Name: NF19838_low_18
Description: NF19838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19838_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 46137890 - 46137651
Alignment:
| Q |
1 |
ttttaattcttatgatannnnnnngcaggatggaggacctggttcccatcttatttcactatgttaaaagccgcgagaaacccaggggatacgtgttatg |
100 |
Q |
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| T |
46137890 |
ttttaattcttatgatatttttttgcaggatggaggacctggttcccatcttatttcactatgttaaaagccgcgagaaacctaggggatacgtgttatg |
46137791 |
T |
|
| Q |
101 |
ggttggtcataatgctcgcgtttttgatgtaccgttcatcattaatgagtttcgtcgatgttctacacagattcctccgaattggctgtttgtcgacact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46137790 |
ggttggtcataatgctcgcgtttttgatgtaccgttcatcattaatgagtttcgtcgatgttctacacagattcctccgaattggctgtttgtcgacact |
46137691 |
T |
|
| Q |
201 |
cttcctttagcacgtcaactaatgaagtctgaaggttcat |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
46137690 |
cttcctttagcacgtcaactaatgaagtctgaaggttcat |
46137651 |
T |
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