View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19838_low_21 (Length: 239)
Name: NF19838_low_21
Description: NF19838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19838_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 46137907 - 46138128
Alignment:
| Q |
2 |
ctatgtaaagctaattaaatggttccaatatactcaatcatcaatgtccacaaacaaatcggttcataatcatatgaggaacatcaggataattactaga |
101 |
Q |
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| T |
46137907 |
ctatgtaaagctaattaaatggttccaatatactcaatcatcaatgtccacaaacaaatcggttcataatcatatgaggaacatcaggataattactaga |
46138006 |
T |
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| Q |
102 |
aacatgataaagnnnnnnnnntctcaatctaacaacatgatacataacttggctacatacttagctacacattcaccgtacaaccatgcacaaggacaaa |
201 |
Q |
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| T |
46138007 |
aacatgataaagaaaaaaatctctcaatctaacaacatgatacataacttggcgacatacttagctacacattcaccatacaaccatgcacaaggacaaa |
46138106 |
T |
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| Q |
202 |
tgaactttggaagaagaaaatt |
223 |
Q |
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|||||||||||||||||||||| |
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| T |
46138107 |
tgaactttggaagaagaaaatt |
46138128 |
T |
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