View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19838_low_9 (Length: 467)
Name: NF19838_low_9
Description: NF19838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19838_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 432; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 1 - 460
Target Start/End: Original strand, 45144225 - 45144684
Alignment:
| Q |
1 |
cactggaaatgcatcaccccaaagaaacaaagctatgaaaatccaactagtttgaatatagttatataagatcataacatgattagaatatttttcaatg |
100 |
Q |
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|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
45144225 |
cactcgaaatgcatcaccccaaagaaacaaagcaatgaaaatccaactagtttgaatatagttatacaagatcataacatgattagaatatttttcaatg |
45144324 |
T |
|
| Q |
101 |
ttttagatcaataagacatgttgtttaatacttaatgatgattattatcaacatttgcattagccgtaattttcatcgagctttgcactctacaaacctt |
200 |
Q |
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| T |
45144325 |
ttttagatcaataagacatgttgtttaatacttaatgatgattattatcaacatttgcattagccgtaatttttatcgagctttgcactctacaaacctt |
45144424 |
T |
|
| Q |
201 |
ataaatatatagataggttagtatttaggatacaaacttacaaagatagataaaggtcacactatttccaggttttagggaaagctcatcaagcaaatta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45144425 |
ataaatatatagataggttagtatttaggatacaaacttacaaagatagataaaggtcacactatttccaggttttagggaaagctcatcaagcaaatta |
45144524 |
T |
|
| Q |
301 |
tagggtactcaacacttattcattaccgatgatgaagcaaaggtaccctatatatgtctctaattcaatcctttgtattttctctatagtagttttgttc |
400 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45144525 |
tagggtactcaacacttattcattaccaatgatgaagcaaaggtaccctatatatgtctctaattcaatcctttgtattttctctatagtagttttgttc |
45144624 |
T |
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| Q |
401 |
tgtttccttatttttacttctatgattaattttgattaattgactttattttatattctt |
460 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
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| T |
45144625 |
tgtttccttatttttacttctctgattaattttgattaattgactttattttattttctt |
45144684 |
T |
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