View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19839_high_34 (Length: 296)
Name: NF19839_high_34
Description: NF19839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19839_high_34 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 33 - 277
Target Start/End: Complemental strand, 51707910 - 51707664
Alignment:
| Q |
33 |
ggtaagaggatattcttcaaaaactaacatcaatattcacctgtcttcatcaatgttccaacactacgtatcatcataagctcaatttcaatctcctcct |
132 |
Q |
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| T |
51707910 |
ggtaagaggatattcttcaaaaactaacatcaatattcacctgtcttcatcaatgttccaacactacgtatcatcataagctcaatttcaatctccccct |
51707811 |
T |
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| Q |
133 |
cactattttcgagtacgatcatcatc-aaattcatcaagttgttgcaatgccgataatatatatttctccaccacattgttttgtcaatgcgaatcaatt |
231 |
Q |
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| T |
51707810 |
cactattttcgagtacgatcatcatcaaaattcatcaagttgttgcaatgccgataatatatatttctccaccacattgttttgtcaatgcgaatcaatt |
51707711 |
T |
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| Q |
232 |
tgttattagttcca-gagttaacaaggttaaatttaattttttctgg |
277 |
Q |
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|||||||||||| | ||||||||||||||||| |||||||||||||| |
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| T |
51707710 |
tgttattagttctaggagttaacaaggttaaagttaattttttctgg |
51707664 |
T |
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