View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19839_low_58 (Length: 206)
Name: NF19839_low_58
Description: NF19839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19839_low_58 |
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Alignment Details
Target: chr4 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 34863427 - 34863256
Alignment:
| Q |
19 |
atccacggaaggaacaaatacaagcaataattgcctaattttcagcttaactactcgcgacaatgacaatgaccattaatacatctcgaatcggaagtac |
118 |
Q |
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| T |
34863427 |
atccacggaaggaacaaatacaagcaataattgcctaattttcagcttaactactcgcgacaatgacaattaccattaatacatctcgaatcggaagtac |
34863328 |
T |
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| Q |
119 |
gaatacaatcaattaatgggcagtcatagtcaaattcgcaaggaataagaggcccaggcggctctgtctctg |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34863327 |
gaatacaatcaattaatgggcagtcatagtcaaattcgcaaggaataagaggcccaggcggctctgtctctg |
34863256 |
T |
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