View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19839_low_7 (Length: 627)

Name: NF19839_low_7
Description: NF19839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19839_low_7
NF19839_low_7
[»] chr8 (41 HSPs)
chr8 (16-563)||(1204521-1205064)
chr8 (5-160)||(36695008-36695159)
chr8 (5-168)||(9864137-9864296)
chr8 (3-159)||(27082878-27083030)
chr8 (6-158)||(12876108-12876256)
chr8 (14-158)||(13307622-13307762)
chr8 (3-159)||(16446915-16447067)
chr8 (5-156)||(465843-465990)
chr8 (3-158)||(6098558-6098709)
chr8 (5-160)||(38643975-38644126)
chr8 (5-158)||(5299988-5300137)
chr8 (21-160)||(40862416-40862551)
chr8 (3-158)||(10555242-10555393)
chr8 (18-149)||(37970574-37970701)
chr8 (3-161)||(34894963-34895117)
chr8 (3-168)||(1150145-1150306)
chr8 (16-159)||(34952084-34952223)
chr8 (3-160)||(16222860-16223013)
chr8 (3-160)||(43643635-43643788)
chr8 (16-144)||(11727037-11727161)
chr8 (5-126)||(43025733-43025850)
chr8 (18-146)||(23854486-23854610)
chr8 (3-80)||(1149672-1149749)
chr8 (3-67)||(7890997-7891061)
chr8 (15-168)||(30654635-30654784)
chr8 (82-158)||(33906223-33906299)
chr8 (3-158)||(41362517-41362665)
chr8 (14-80)||(39099170-39099236)
chr8 (103-158)||(15009241-15009296)
chr8 (89-160)||(24823394-24823465)
chr8 (92-158)||(33197891-33197957)
chr8 (105-158)||(4133146-4133199)
chr8 (103-156)||(7891084-7891137)
chr8 (3-80)||(31933926-31934003)
chr8 (110-161)||(4108912-4108963)
chr8 (5-55)||(41911030-41911080)
chr8 (582-611)||(1204492-1204521)
chr8 (118-159)||(7998361-7998402)
chr8 (110-159)||(38110352-38110401)
chr8 (120-161)||(39099262-39099303)
chr8 (14-74)||(44869576-44869636)
[»] chr5 (54 HSPs)
chr5 (16-161)||(8741923-8742065)
chr5 (5-163)||(19119854-19120008)
chr5 (16-159)||(9200232-9200371)
chr5 (5-156)||(25500952-25501099)
chr5 (5-145)||(26268087-26268223)
chr5 (16-160)||(36860421-36860561)
chr5 (5-158)||(36866762-36866911)
chr5 (5-158)||(40133385-40133534)
chr5 (3-157)||(22980794-22980944)
chr5 (16-156)||(5837557-5837693)
chr5 (18-158)||(7693230-7693366)
chr5 (14-160)||(27330304-27330444)
chr5 (5-144)||(30969350-30969485)
chr5 (18-160)||(5112352-5112490)
chr5 (16-158)||(22019632-22019770)
chr5 (3-156)||(699152-699301)
chr5 (3-161)||(24886099-24886255)
chr5 (3-159)||(1429169-1429321)
chr5 (16-158)||(15724490-15724626)
chr5 (5-159)||(39572818-39572968)
chr5 (16-160)||(8466743-8466882)
chr5 (2-158)||(31786669-31786821)
chr5 (5-157)||(32563150-32563298)
chr5 (2-160)||(38528260-38528413)
chr5 (2-158)||(14409350-14409501)
chr5 (2-146)||(33908245-33908385)
chr5 (17-156)||(11898004-11898139)
chr5 (3-146)||(27318511-27318650)
chr5 (3-80)||(22255256-22255333)
chr5 (82-159)||(35933901-35933978)
chr5 (14-158)||(23116257-23116397)
chr5 (5-121)||(25668687-25668798)
chr5 (14-160)||(12910348-12910495)
chr5 (3-162)||(22974106-22974261)
chr5 (16-77)||(21088803-21088864)
chr5 (18-160)||(35826522-35826660)
chr5 (5-75)||(15992566-15992636)
chr5 (15-73)||(43308688-43308746)
chr5 (23-145)||(8436979-8437097)
chr5 (16-161)||(14919565-14919707)
chr5 (82-158)||(16004475-16004552)
chr5 (5-119)||(28416553-28416663)
chr5 (3-157)||(31705636-31705785)
chr5 (21-80)||(5829975-5830034)
chr5 (104-155)||(13380498-13380549)
chr5 (110-161)||(22616491-22616542)
chr5 (3-158)||(35511501-35511652)
chr5 (3-80)||(7208888-7208964)
chr5 (110-159)||(36055874-36055923)
chr5 (103-158)||(26317804-26317859)
chr5 (82-160)||(13956444-13956522)
chr5 (3-80)||(23954813-23954891)
chr5 (110-159)||(27579038-27579087)
chr5 (5-57)||(35933992-35934044)
[»] chr6 (19 HSPs)
chr6 (16-159)||(8513232-8513371)
chr6 (5-159)||(3879974-3880124)
chr6 (5-156)||(6088910-6089057)
chr6 (5-167)||(4318858-4319016)
chr6 (5-156)||(21017147-21017294)
chr6 (5-156)||(29182165-29182312)
chr6 (2-158)||(33618834-33618986)
chr6 (23-164)||(18498427-18498565)
chr6 (5-142)||(15491631-15491764)
chr6 (5-158)||(33893038-33893186)
chr6 (2-158)||(7235067-7235218)
chr6 (5-157)||(20768087-20768233)
chr6 (16-156)||(30353404-30353540)
chr6 (16-160)||(1945831-1945972)
chr6 (15-160)||(5627389-5627530)
chr6 (15-159)||(7055260-7055400)
chr6 (110-162)||(11084152-11084204)
chr6 (18-80)||(6091231-6091293)
chr6 (110-160)||(19631747-19631797)
[»] chr2 (46 HSPs)
chr2 (5-159)||(19424682-19424832)
chr2 (5-160)||(4166920-4167071)
chr2 (5-162)||(13711460-13711613)
chr2 (5-160)||(39167417-39167568)
chr2 (16-156)||(36641988-36642124)
chr2 (5-159)||(4264131-4264281)
chr2 (5-160)||(31570788-31570939)
chr2 (3-158)||(33551038-33551189)
chr2 (5-166)||(3176931-3177088)
chr2 (5-121)||(4478406-4478518)
chr2 (16-156)||(41463915-41464051)
chr2 (5-159)||(27349993-27350143)
chr2 (5-156)||(43770893-43771039)
chr2 (18-156)||(33660435-33660569)
chr2 (5-158)||(19313852-19314000)
chr2 (82-162)||(18494395-18494475)
chr2 (23-162)||(2325442-2325577)
chr2 (14-156)||(44285951-44286089)
chr2 (82-158)||(41465509-41465585)
chr2 (3-159)||(17071789-17071941)
chr2 (5-80)||(37905782-37905857)
chr2 (3-80)||(19289375-19289452)
chr2 (44-158)||(26357577-26357687)
chr2 (14-160)||(29242201-29242343)
chr2 (16-159)||(5881533-5881677)
chr2 (4-159)||(17054149-17054300)
chr2 (14-158)||(4763628-4763771)
chr2 (15-159)||(11366445-11366585)
chr2 (110-161)||(19093410-19093461)
chr2 (3-158)||(33902068-33902217)
chr2 (3-54)||(41960940-41960991)
chr2 (23-126)||(33709304-33709403)
chr2 (5-158)||(44913662-44913812)
chr2 (14-128)||(41051268-41051379)
chr2 (3-80)||(43648297-43648374)
chr2 (110-163)||(22963395-22963448)
chr2 (110-163)||(22998029-22998082)
chr2 (14-54)||(18494343-18494383)
chr2 (110-154)||(18947598-18947642)
chr2 (2-54)||(45327820-45327872)
chr2 (21-80)||(7006991-7007050)
chr2 (110-160)||(6177773-6177823)
chr2 (113-159)||(39788580-39788626)
chr2 (110-158)||(18514771-18514819)
chr2 (110-158)||(31861895-31861943)
chr2 (111-159)||(43446463-43446511)
[»] scaffold0002 (3 HSPs)
scaffold0002 (5-159)||(133-283)
scaffold0002 (3-128)||(94417-94538)
scaffold0002 (3-67)||(408463-408526)
[»] chr7 (47 HSPs)
chr7 (16-158)||(5657529-5657667)
chr7 (14-158)||(8861260-8861400)
chr7 (5-158)||(4582894-4583043)
chr7 (5-159)||(21991610-21991760)
chr7 (5-158)||(12165727-12165876)
chr7 (5-158)||(15612796-15612944)
chr7 (16-128)||(29173545-29173653)
chr7 (3-163)||(12390665-12390821)
chr7 (3-162)||(30055497-30055653)
chr7 (2-160)||(41765112-41765266)
chr7 (5-159)||(43686015-43686164)
chr7 (3-160)||(32821088-32821241)
chr7 (16-160)||(26524375-26524515)
chr7 (5-157)||(48928601-48928748)
chr7 (14-144)||(22687228-22687354)
chr7 (5-159)||(32432431-32432576)
chr7 (15-163)||(24211711-24211855)
chr7 (16-128)||(26980328-26980436)
chr7 (16-156)||(25691592-25691729)
chr7 (3-160)||(18797302-18797453)
chr7 (5-158)||(6546494-6546643)
chr7 (5-157)||(33688299-33688446)
chr7 (24-158)||(34362205-34362334)
chr7 (3-159)||(31579099-31579256)
chr7 (21-158)||(37346997-37347130)
chr7 (18-158)||(31520774-31520909)
chr7 (5-156)||(27421417-27421563)
chr7 (3-158)||(37109847-37109998)
chr7 (3-160)||(9355861-9356014)
chr7 (3-160)||(17842621-17842774)
chr7 (3-156)||(23111167-23111316)
chr7 (5-142)||(48928334-48928466)
chr7 (15-158)||(7334769-7334908)
chr7 (3-158)||(27283719-27283870)
chr7 (2-80)||(38258594-38258672)
chr7 (2-121)||(35353120-35353236)
chr7 (98-156)||(8299192-8299250)
chr7 (14-80)||(11071255-11071321)
chr7 (3-74)||(10481660-10481731)
chr7 (110-158)||(23402371-23402419)
chr7 (14-158)||(10359261-10359400)
chr7 (110-156)||(3953733-3953779)
chr7 (110-164)||(4902334-4902388)
chr7 (15-61)||(34362149-34362195)
chr7 (110-160)||(40381938-40381988)
chr7 (23-64)||(43925167-43925208)
chr7 (16-80)||(44413427-44413491)
[»] chr3 (54 HSPs)
chr3 (5-159)||(11466814-11466964)
chr3 (5-168)||(34132916-34133075)
chr3 (16-158)||(4015451-4015589)
chr3 (5-161)||(35844314-35844466)
chr3 (5-158)||(45174494-45174645)
chr3 (3-160)||(48354930-48355083)
chr3 (5-160)||(21193595-21193746)
chr3 (2-160)||(22450957-22451111)
chr3 (3-158)||(51213015-51213166)
chr3 (3-143)||(11357398-11357535)
chr3 (5-145)||(40935995-40936131)
chr3 (3-158)||(37203058-37203209)
chr3 (16-159)||(44186548-44186687)
chr3 (18-156)||(46297811-46297945)
chr3 (14-159)||(40552304-40552445)
chr3 (3-163)||(53229186-53229343)
chr3 (16-164)||(47481507-47481651)
chr3 (17-159)||(7327530-7327669)
chr3 (5-159)||(52040958-52041109)
chr3 (5-159)||(3655238-3655388)
chr3 (3-159)||(26941294-26941446)
chr3 (16-148)||(29099356-29099484)
chr3 (2-164)||(33378818-33378973)
chr3 (3-80)||(42506109-42506186)
chr3 (5-118)||(2007964-2008073)
chr3 (3-164)||(20373330-20373487)
chr3 (3-158)||(37157699-37157849)
chr3 (3-160)||(4761683-4761838)
chr3 (14-156)||(43975933-43976068)
chr3 (3-65)||(38591778-38591840)
chr3 (5-119)||(24488998-24489108)
chr3 (85-157)||(25579731-25579803)
chr3 (3-160)||(39282642-39282794)
chr3 (5-158)||(44891498-44891637)
chr3 (5-68)||(53176131-53176194)
chr3 (44-161)||(32373460-32373571)
chr3 (110-160)||(40640634-40640684)
chr3 (98-161)||(55343409-55343472)
chr3 (2-68)||(27480412-27480478)
chr3 (103-157)||(29163839-29163893)
chr3 (110-156)||(53818509-53818555)
chr3 (16-126)||(3362276-3362382)
chr3 (104-157)||(11835737-11835790)
chr3 (15-80)||(21009848-21009913)
chr3 (3-64)||(24708151-24708212)
chr3 (82-158)||(33698183-33698255)
chr3 (110-160)||(38392628-38392678)
chr3 (121-163)||(53175709-53175751)
chr3 (16-80)||(22446111-22446175)
chr3 (110-159)||(45879498-45879547)
chr3 (103-156)||(54828830-54828883)
chr3 (18-62)||(46994710-46994754)
chr3 (110-158)||(47930666-47930714)
chr3 (110-158)||(53811976-53812024)
[»] chr4 (56 HSPs)
chr4 (16-156)||(34948170-34948306)
chr4 (5-163)||(55241167-55241320)
chr4 (3-158)||(19089513-19089664)
chr4 (5-156)||(27396618-27396765)
chr4 (14-163)||(29584271-29584414)
chr4 (16-157)||(4597994-4598130)
chr4 (14-161)||(25701128-25701271)
chr4 (5-158)||(49375966-49376116)
chr4 (2-158)||(28003045-28003197)
chr4 (3-164)||(38011848-38012005)
chr4 (5-156)||(17167715-17167862)
chr4 (5-156)||(17173292-17173439)
chr4 (24-158)||(7703517-7703647)
chr4 (18-156)||(36493763-36493897)
chr4 (3-159)||(879608-879760)
chr4 (24-156)||(47253751-47253878)
chr4 (18-161)||(35021110-35021249)
chr4 (5-155)||(32592096-32592242)
chr4 (3-80)||(37663801-37663878)
chr4 (21-158)||(39397918-39398051)
chr4 (16-128)||(54499311-54499420)
chr4 (3-158)||(19440708-19440860)
chr4 (5-141)||(23761089-23761221)
chr4 (3-160)||(55477951-55478108)
chr4 (49-168)||(4205106-4205221)
chr4 (5-161)||(50764732-50764879)
chr4 (26-159)||(37287732-37287862)
chr4 (24-161)||(30002705-30002838)
chr4 (5-156)||(33341397-33341547)
chr4 (3-159)||(25184112-25184264)
chr4 (17-160)||(34361566-34361704)
chr4 (24-159)||(35025669-35025800)
chr4 (103-156)||(52516599-52516652)
chr4 (15-160)||(32912652-32912793)
chr4 (5-157)||(37775670-37775816)
chr4 (3-74)||(4934262-4934333)
chr4 (110-160)||(2704510-2704560)
chr4 (110-160)||(38812260-38812310)
chr4 (2-144)||(5048024-5048162)
chr4 (103-160)||(17272009-17272066)
chr4 (104-156)||(20097485-20097537)
chr4 (3-66)||(6864123-6864186)
chr4 (82-161)||(32579441-32579520)
chr4 (3-159)||(42199728-42199880)
chr4 (3-160)||(9139245-9139396)
chr4 (5-156)||(33816595-33816742)
chr4 (14-144)||(46888228-46888354)
chr4 (110-158)||(38811813-38811861)
chr4 (131-161)||(1012306-1012336)
chr4 (82-160)||(7152241-7152319)
chr4 (105-159)||(37663897-37663951)
chr4 (109-163)||(47073656-47073710)
chr4 (3-80)||(50697316-50697392)
chr4 (104-157)||(51204580-51204633)
chr4 (103-163)||(3042606-3042666)
chr4 (103-155)||(6864038-6864090)
[»] chr1 (53 HSPs)
chr1 (17-163)||(11742394-11742535)
chr1 (5-152)||(47279191-47279334)
chr1 (3-156)||(15752027-15752176)
chr1 (5-158)||(38823210-38823359)
chr1 (3-160)||(16415639-16415793)
chr1 (16-158)||(7079105-7079254)
chr1 (4-159)||(2959743-2959894)
chr1 (5-164)||(48620627-48620782)
chr1 (24-162)||(1547279-1547413)
chr1 (5-163)||(3309139-3309292)
chr1 (5-161)||(39393376-39393528)
chr1 (5-168)||(238544-238702)
chr1 (2-157)||(14758038-14758189)
chr1 (5-142)||(27533011-27533144)
chr1 (3-157)||(10922724-10922874)
chr1 (3-158)||(47682523-47682673)
chr1 (5-161)||(32267027-32267179)
chr1 (5-159)||(10182039-10182189)
chr1 (5-159)||(18422646-18422796)
chr1 (14-163)||(37618932-37619081)
chr1 (2-161)||(15168082-15168244)
chr1 (2-158)||(31621581-31621733)
chr1 (5-161)||(34012408-34012560)
chr1 (14-80)||(21289742-21289808)
chr1 (2-145)||(4330288-4330429)
chr1 (3-160)||(15382927-15383080)
chr1 (3-67)||(25160715-25160779)
chr1 (5-161)||(3534925-3535077)
chr1 (15-159)||(19899810-19899950)
chr1 (5-68)||(27227516-27227579)
chr1 (3-158)||(27267228-27267376)
chr1 (18-121)||(32216088-32216187)
chr1 (3-158)||(42721035-42721186)
chr1 (3-68)||(28564810-28564875)
chr1 (3-68)||(30254505-30254570)
chr1 (3-128)||(9903083-9903204)
chr1 (3-156)||(28769651-28769799)
chr1 (5-126)||(40884841-40884958)
chr1 (14-67)||(30326992-30327045)
chr1 (5-73)||(41926240-41926308)
chr1 (3-62)||(8222216-8222275)
chr1 (103-158)||(21289661-21289716)
chr1 (2-57)||(33725628-33725683)
chr1 (15-158)||(23999343-23999482)
chr1 (105-158)||(27227604-27227657)
chr1 (3-80)||(51128929-51129006)
chr1 (3-148)||(37451292-37451432)
chr1 (110-158)||(43579242-43579290)
chr1 (113-160)||(4150490-4150537)
chr1 (103-161)||(22170747-22170805)
chr1 (109-159)||(26970260-26970310)
chr1 (15-80)||(46931481-46931546)
chr1 (103-159)||(30254853-30254909)
[»] scaffold0291 (1 HSPs)
scaffold0291 (3-161)||(7884-8038)
[»] scaffold0061 (1 HSPs)
scaffold0061 (3-156)||(43959-44108)
[»] scaffold0017 (1 HSPs)
scaffold0017 (3-156)||(154679-154828)
[»] scaffold0009 (2 HSPs)
scaffold0009 (82-159)||(42347-42424)
scaffold0009 (103-162)||(100817-100876)
[»] scaffold0318 (1 HSPs)
scaffold0318 (5-156)||(11908-12058)
[»] scaffold0022 (1 HSPs)
scaffold0022 (15-80)||(146062-146127)
[»] scaffold0262 (1 HSPs)
scaffold0262 (109-158)||(12137-12186)


Alignment Details
Target: chr8 (Bit Score: 414; Significance: 0; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 16 - 563
Target Start/End: Complemental strand, 1205064 - 1204521
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||| ||  |||||||    |||| ||| |||  ||  |||||||||||||    
T  1205064 tgatgaactgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgatgtgttac----tcactacattttttatgttatagtgttaact 1204969  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcctttttattaaatcaggtgtttggagccaaaatagtggaaaaacttgccttatagttt 215  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1204968 tcaccagaaaagtcattctcatgacttcaccgtaaaattttcctttttattaaatcaggtgtttggagccaaaatagtggaaaaaattgccttatagttt 1204869  T
Q  216 agttttttagttggagatggaactagagatgaagctcatttgacacggaacaattatgtctctaaatgtcgtctccgaataattgttgactttataaaaa 315  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  1204868 atttttttagttggagatggaactagagatgaagctcatttgacacggaacaattatgtctgtaaatgtcgtctccgtataattgttgactttataaaaa 1204769  T
Q  316 cagaaatttgacccaatagagacgaatttggacacgaaatactgttgtgattgcgtctctaacttccgtctctaatnnnnnnntaattaacttatgtcaa 415  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||||||||||       |||||||||||||||||    
T  1204768 cagaaatttgacccaatagagacgaatgtggacacgaaatactgttgtgactgcgtctcttgcttccgtctctaataaaaaaataattaacttatgtcaa 1204669  T
Q  416 taaatccgtttctaattcatcgctctctcatattctttctatctcatctttttcgttgttggtcataagtgttctaacgtgatagttttacttgtgtaac 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1204668 taaatccgtttctaattcatcgctctctcatattctttctatctcatctttttcgttgttggtcataagtgttctaacgtgatagttttacttgtgtaac 1204569  T
Q  516 actttgtcatcttcatcactggttgattgcttaaaaggttagttatat 563  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1204568 actttgtcatcttcatcactggttgattgcttaaaaggttagttatat 1204521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 36695008 - 36695159
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |||| ||    
T  36695008 tcttcttagtctgatgaattgatgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacatttttgatatta 36695103  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||| |||||||||  || || ||||||||||||| ||||||||||    
T  36695104 tagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaattttcctt 36695159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 9864296 - 9864137
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |||||||    
T  9864296 tcttattagtctgatgaattgatgatattatggggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacatttttgatacta 9864201  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttttattaa 168  Q
    ||||||||| ||||||| ||||||  || || ||||||||  ||| ||||||||||||||||||    
T  9864200 tagtgttaatttcaccaaaaaagtcattttcgtgacttcattatagaattttcctttttattaa 9864137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 27082878 - 27083030
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | ||||||||||||||||||||| ||||| ||||||| |||||| || ||||||| |||||||||||    |||| ||||||| ||| |    
T  27082878 agtcttgttaatttgatgaattgatgatactatgaggactgaacttttaatgccactgcacaaacagtggggtgttac----tcactacacttttgatgc 27082973  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||||||||||||||   ||| |||||||||||||| |||||||||    
T  27082974 tatagtgttaacttcaccagaaaagtcagtctgatgacttcaccatagaattttcct 27083030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 6 - 158
Target Start/End: Complemental strand, 12876256 - 12876108
Alignment:
Q  6 cttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactat 105  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| | ||||||    ||||||||||| |||  ||| |||    
T  12876256 cttcttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagttgggtgt----tactcacaacattttttatattat 12876161  T
Q  106 agtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||| |||||||||  || || |||||| |||||| ||||||||    
T  12876160 agtgttaacttcatcagaaaagtcattttcgtgacttaaccatagaattttcc 12876108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 13307762 - 13307622
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||| |||||||| ||||| ||||||||||| || |||||||| | || ||||||||    |||||||||||| |||  |||||||||||    
T  13307762 tctgatgaattgataatactatggggactgaacttttgatgtcactgtacaaatagtgaggtgttac----tcacaacacttttgatgttatagtgttaa 13307667  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||| |  ||||||||||||||||||| ||||||||    
T  13307666 cttcaccagaaaaatcattctcatgacttcaccatagaattttcc 13307622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 16446915 - 16447067
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| |||| ||||| |||||||||||||||| |||||||| ||||||||    ||||||| ||| ||| |||      
T  16446915 agtcttgttaatctgatgaattgatgatagtatggggactaaacttttgatgccattatacaaacagtggggtgt----tactcactacaattttgatgt 16447010  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||||| | |||||||||  || |||||||||||||||| |||||||||    
T  16447011 tatagtgttaactttatcagaaaagtcattttcatgacttcaccatagaattttcct 16447067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 465990 - 465843
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||||| || ||||||||||| |||||||||| ||||||||    ||||||||||||||| |||  ||    
T  465990 tcttgttaatctgatgaattgatgatactaaggggactgaatttttgatgccactgtacaaacagtggggtgt----tactcacaacacttttgatgtta 465895  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    | ||||||||||||||| ||||||  || | |||||||||||||||||||||    
T  465894 tcgtgttaacttcaccacaaaagtcattttaatgacttcaccataaaatttt 465843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 6098558 - 6098709
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||| ||||||||| ||||| ||||||||||| || |||||||||| |||||||||||    |||| | | ||| ||| |    
T  6098558 agtcttgttaatctgatgaattgacgatactatggggactgaacttttgatgtcactgtacaaacagtggggtgttac----tcactatatttttgatgc 6098653  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||| |||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  6098654 tatagtattaacttcaccaaaaaagttattttcatgacttcaccatagaattttcc 6098709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 38644126 - 38643975
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||  |||| |||||||||||||| |  ||||||| |||||||||||    |||||||||||| |||  ||    
T  38644126 tcttgttaatctgatgaattgatgatactatggagactgaacttttgatgccactagacaaacagtggggtgttac----tcacaacacttttgatgtta 38644031  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||| |||| ||||||  ||||||||| ||||||||| ||||||||||    
T  38644030 tagtgttaacttgaccaaaaaagtcattctcatgatttcaccatagaattttcctt 38643975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 5299988 - 5300137
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||  ||||| |||||||||||||| |||||||||| | | ||| ||| |||    |||||||| ||| |||    
T  5299988 tcttgttaatctgatgaattgatgatactataaggactgaacttttgatgccactgtacaaacagtagagtgctacttac----aacacttttgatgcta 5300083  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||  | ||||||  ||||||||||||||||||| ||||||||    
T  5300084 tagtgttaacttcattaaaaaagtcattctcatgacttcaccatagaattttcc 5300137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 40862551 - 40862416
Alignment:
Q  21 aattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttc-gatactatagtgttaacttcac 119  Q
    |||||||||||| ||| | ||| ||||||||||||||||||||||||| |||||||||||    |||||||| |||  |||| |||||||||||||||||    
T  40862551 aattgatgataccatgag-actgaacttttgatgccattgtacaaacagtggggtgttac----tcacaacattttttgatattatagtgttaacttcac 40862457  T
Q  120 cagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||| || || ||||||||| ||| ||||||||||    
T  40862456 cagaaaagttattttcgtgacttcactatagaattttcctt 40862416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 10555242 - 10555393
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||| | ||||||||||| ||||||||||||| ||| ||||    ||||||  ||| |||  ||      
T  10555242 agtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggagtgt----tactcattacattttttatgt 10555337  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||||| ||||||  |||||||||||||||| || ||||||||    
T  10555338 tatagtgttaacttcaccaaaaaagtcattctcatgacttcaccgtagaattttcc 10555393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 37970574 - 37970701
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||||| || || ||||||||||| ||||||||||||| ||||||||    ||||||  ||| ||| |||  |||||||||||||||    
T  37970574 atgaattgatgatactatgagggctgaacttttgatggcattgtacaaacagtggggtgt----tactcattacatttttgatgttatagtgttaacttc 37970669  T
Q  118 accagaaaagttgttctcatgacttcaccata 149  Q
    |||| ||||||  |||||||||||||||||||    
T  37970670 accaaaaaagtcattctcatgacttcaccata 37970701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 34895117 - 34894963
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| ||||  |||| |||||||||||||| | |||||||| ||| |||||||    |||| ||| | | |||      
T  34895117 agtcttgttaatctgatgaattgatgatagtatgatgactgaacttttgatgccactttacaaacagtggagtgttac----tcactacagtgttgatgt 34895022  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    |||||||||||||||| |||||||||  || |||||||||||||||| |||||||||||    
T  34895021 tatagtgttaacttcatcagaaaagtcattttcatgacttcaccatagaattttccttt 34894963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 1150145 - 1150306
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||||||||  |||| ||||||||||| | ||||||||||| |||| |||    ||||||  ||| ||| |||      
T  1150145 agtcttgttaatctgatgagttgatgatactatgatgactgaacttttgatgtcgttgtacaaacagtgggatgt----tactcattacatttttgatgt 1150240  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttttattaa 168  Q
    ||||| ||||||||||||| ||||||  |||| |||||||||||||| |||||||||  |||||||    
T  1150241 tatagcgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcctaattattaa 1150306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 34952084 - 34952223
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||||||   ||||| ||||||||||| || |||||||||| |||| ||||||    |||||||||||| |||  |||||||||||||    
T  34952084 tgatgaattgatgatactaaagggactgaacttttgatgtcactgtacaaacagtgggctgttac----tcacaacacttttgatgatatagtgttaact 34952179  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    | |||||||||||  || | ||||||| || ||| |||||||||    
T  34952180 tgaccagaaaagtcattttaatgactttactatagaattttcct 34952223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 16223013 - 16222860
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| || |||||||||||||||||||| ||||| ||||||||||| ||||||||||||  |||||    |  ||||||| | | |||  ||      
T  16223013 agtcttgttaatcggatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaactgtgggg----aactactcactatattttttatgt 16222918  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||||| ||||||||||||||  ||||||||| |||||| || ||||||||||    
T  16222917 tatagtgttaaattcaccagaaaagtcattctcatgatttcaccgtagaattttcctt 16222860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 43643635 - 43643788
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||||||||  || | |||||| |||| ||||||||||||| | | |||||||    |||  ||| ||| |||      
T  43643635 agtcttgttaatctgatgagttgatgatactatgaagattgaactttggatgtcattgtacaaacagtagagtgttac----tcattacatttttgatgt 43643730  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||||||||||||| || |||  ||||||||||||||||||| ||||||||||    
T  43643731 tatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcctt 43643788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 11727161 - 11727037
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||| |||| ||||| |||||||||||||| | |||||| | ||||||||    |||| |||||||||| |||  |||||||||||||    
T  11727161 tgatgaattgatgatattatgaggactgaacttttgatgccactatacaaatagtggggtgt----tacttacaacacttttgatgttatagtgttaact 11727066  T
Q  116 tcaccagaaaagttgttctcatgacttca 144  Q
    |||||| |||| |  ||||||| ||||||    
T  11727065 tcaccaaaaaaatcattctcataacttca 11727037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 43025850 - 43025733
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| |||||||||||||||||| ||| || ||| ||||||| || |||||||||||| | |||||| |    || |||||||||||| |||||||    
T  43025850 tcttcttagtctgatgaattgatgatattatatgaactgaacttttaataccattgtacaaagagtggggtat----taatcacaacacttttgatacta 43025755  T
Q  105 tagtgttaacttcaccagaaaa 126  Q
    ||  ||||||||||||| ||||    
T  43025754 tatcgttaacttcaccataaaa 43025733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 23854486 - 23854610
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    |||| |||||||||||||| ||||| ||||||||||| ||||| ||||||| | ||||||    ||||||  ||| |||  ||  |||||||||||||||    
T  23854486 atgagttgatgatactatgaggactgaacttttgatgtcattgcacaaacagttgggtgt----tactcattacattttttatgttatagtgttaacttc 23854581  T
Q  118 accagaaaagttgttctcatgacttcacc 146  Q
    |||| ||||||  ||||||||||||||||    
T  23854582 accaaaaaagtcattctcatgacttcacc 23854610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 1149672 - 1149749
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| |||||||| |||||||||||||| ||||  ||||||||||| ||||||||||||| |||| ||||||    
T  1149672 agtcttgttaatctgatgagttgatgatactatgaggacagaacttttgatgtcattgtacaaacagtgggttgttac 1149749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 7890997 - 7891061
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaac 67  Q
    |||||| ||| |||||||||||||||||| |||| ||||  ||||||||||||||||||||||||    
T  7890997 agtcttgttaatctgatgaattgatgatattatgaggaccgaacttttgatgccattgtacaaac 7891061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 30654635 - 30654784
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||| |||||||||||||  | || ||||||||||| ||||  ||||||| |||||||||||    |||  ||| |||  ||  ||||||||||||    
T  30654635 ctgatgaagtgatgatactatgaaggctgaacttttgatgtcattcaacaaacagtggggtgttac----tcattacattttttatgttatagtgttaac 30654730  T
Q  115 ttcaccagaaaagttgttctcatgacttcaccataaaattttcctttttattaa 168  Q
    ||||||| |||| |   ||| |||||||||||||||||||||||| ||| ||||    
T  30654731 ttcaccaaaaaaatcactcttatgacttcaccataaaattttcctattttttaa 30654784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 33906299 - 33906223
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||| |||||||  ||||||||||||| ||||||||||||||||  ||||||| | ||||||||| ||||||||    
T  33906299 tactcactacacttttaatactatagtgttgacttcaccagaaaagtcattctcataatttcaccatagaattttcc 33906223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 41362665 - 41362517
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| || || ||||||||||| || | |||||| | ||||||||    ||||||| ||| |||   ||     
T  41362665 agtcttgttaatctgatgaattgatgatactatgaggtctgaacttttgatgtcactatacaaatagtggggtgt----tactcactacatttt---tat 41362573  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
      ||||||||||||||||| ||||||  || |||| ||||||||||| ||||||||    
T  41362572 gctagtgttaacttcaccaaaaaagtcattttcataacttcaccatagaattttcc 41362517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 39099170 - 39099236
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||| ||||||||| ||||| |||||||||||| | |||||||| | |||||||||||    
T  39099170 tctgatgaattgacgatactatgaggactgaacttttgatgctagtgtacaaagagtggggtgttac 39099236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 15009296 - 15009241
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||||| ||||||||    
T  15009296 tatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 15009241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 24823394 - 24823465
Alignment:
Q  89 aacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||| |||| ||||||||||||||||||| ||||||  ||||||| |||| ||||||  |||||||||    
T  24823394 aacacttttgatattatagtgttaacttcaccaaaaaagtcattctcataactttaccatagtattttcctt 24823465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 33197957 - 33197891
Alignment:
Q  92 actttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||| ||| ||||||| ||||||| | ||||||| || ||||||||||||||||||| ||||||||    
T  33197957 acttttgatgctatagtattaacttaatcagaaaaattattctcatgacttcaccatagaattttcc 33197891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 4133146 - 4133199
Alignment:
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||| ||||||  |||| ||||||| |||||||||||||||    
T  4133146 tagtgttaacttcaccaaaaaagtcattctgatgacttgaccataaaattttcc 4133199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 7891084 - 7891137
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    ||||||||||||||||| | ||||||  ||||||||||||||||||| ||||||    
T  7891084 tatagtgttaacttcacaaaaaaagtcattctcatgacttcaccatagaatttt 7891137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 31933926 - 31934003
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| || |||||||||||||||||||   |||| ||||||||||| ||||||| ||| | |||||||||||    
T  31933926 agtcttgttaatcggatgaattgatgatactataatgactgaacttttgatgtcattgtataaagagtggggtgttac 31934003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 4108912 - 4108963
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    ||||||| |||| ||||||  || ||||||||||||||||||||||||||||    
T  4108912 ttaactttaccaaaaaagtcattttcatgacttcaccataaaattttccttt 4108963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 41911030 - 41911080
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgc 55  Q
    |||| ||| |||||||||||||||||||||||| |||| || |||||||||    
T  41911030 tcttgttaatctgatgaattgatgatactatgttgactgaatttttgatgc 41911080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 582 - 611
Target Start/End: Complemental strand, 1204521 - 1204492
Alignment:
Q  582 ttcaacttcttcatttcatgattacatatt 611  Q
    ||||||||||||||||||||||||||||||    
T  1204521 ttcaacttcttcatttcatgattacatatt 1204492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 7998402 - 7998361
Alignment:
Q  118 accagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||  ||||||||||||||||||| |||||||||    
T  7998402 accagaaaagtcattctcatgacttcaccatagaattttcct 7998361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 38110401 - 38110352
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||| ||||||| |  || ||||||||||||||||||||||||||    
T  38110401 ttaacttcatcagaaaaatcattttcatgacttcaccataaaattttcct 38110352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 39099262 - 39099303
Alignment:
Q  120 cagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    |||||||||  ||||||||||||||||||| |||||||||||    
T  39099262 cagaaaagtcattctcatgacttcaccatagaattttccttt 39099303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 44869636 - 44869576
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactgggg 74  Q
    |||||| ||||||||||||||||  || | ||||||||||| |||||| |||||| |||||    
T  44869636 tctgataaattgatgatactatgacgattgaacttttgatgtcattgtgcaaacagtgggg 44869576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 9e-41; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 8741923 - 8742065
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactgggg-tgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||| ||||||    |||||||||||| ||| |||||||||||||    
T  8741923 tgatgaattgatgatactatggagactgaacttttgatgccattgtacaaacaatgggggtgttac----tcacaacacttttgatgctatagtgttaac 8742018  T
Q  115 ttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||||    
T  8742019 ttcaccagaaaagtcattctcatgacttcaccatagaattttccttt 8742065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 19120008 - 19119854
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||| |||||| ||||| ||||||||||| || |||||||||| |||||||||||    |  ||||||||| ||| |||    
T  19120008 tcttgttaatctgatgaattgatgacactatggggactgaacttttgatgtcactgtacaaacagtggggtgttac----tagcaacacttttgatgcta 19119913  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||| |||||||||||||    
T  19119912 tagtgttaacttcaccacaaaagtcattctcatgacttcaccatagaattttccttttt 19119854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 9200371 - 9200232
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||| | ||||| ||||||||||| || |||||||||  |||||||||||    |||||||||||| |||  |||||||||||||    
T  9200371 tgatgaattgatgatactaagaggactaaacttttgatgtcactgtacaaactgtggggtgttac----tcacaacacttttgatgttatagtgttaact 9200276  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||||| || | ||||||||||||||||||||||||    
T  9200275 tcaccagaaaagttattttaatgacttcaccataaaattttcct 9200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 25500952 - 25501099
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||  ||||||||||||||||| || |||||||||| || |||||||     |||||||||||| ||| |||    
T  25500952 tcttgttaatctgatgaattgatgatactatagggacttaacttttgatggcagtgtacaaacagtgaggtgttat----tcacaacacttttgatgcta 25501047  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||| |||||||||||  ||||||||||||||||||| ||||||    
T  25501048 tagtgttaactttaccagaaaagtcattctcatgacttcaccatagaatttt 25501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 26268223 - 26268087
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||| ||||||||    |||||| |||||||| ||| |||    
T  26268223 tcttgttaatctgatgaattgatgatactatgtggactaaacttttgatgtcaccgtacaaacagtggggtgt----tactcaaaacacttttgatgcta 26268128  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcac 145  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  26268127 tagtgttaacttcaccagaaaaatcattctcatgacttcac 26268087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 36860561 - 36860421
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||| |||||||||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||||||| |||  |||||||||||||||||    
T  36860561 tgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacattttttatactatagtgttaact 36860466  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||||| |  || || ||||||||||||| ||||||||||    
T  36860465 tcaccagaaaaatcattttcgtgacttcaccatagaattttcctt 36860421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 36866911 - 36866762
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||| |||||||||  ||||| ||||||||||||||||||||||||| ||||||||    ||||||||| | ||| |||| ||    
T  36866911 tcttgttagtctgatgaattgttgatactatcgggactgaacttttgatgccattgtacaaacagtggggtgt----tactcacaatatttttgatatta 36866816  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||||||||||||||| |  || || ||||||||||||| ||||||||    
T  36866815 tagtgttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttcc 36866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 40133534 - 40133385
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||||| | ||||||||    ||||||||||| ||| |||||||    
T  40133534 tcttgttagtctgatgaattgttgatattatggggactgaacttttgatgccattgtacaaatagtggggtgt----tactcacaacatttttgatacta 40133439  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    || |||||||||||||| ||||||  || || ||||||||||||| ||||||||    
T  40133438 taatgttaacttcaccacaaaagtcattttcgtgacttcaccatagaattttcc 40133385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 22980944 - 22980794
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| |||||  |||||| |||||| ||||    ||||   | ||| |||||    
T  22980944 agtcttgttaatctgatgaattgatgatactatggggactgaacttttgatgtcattgctcaaacagtggggtattac----tcactgtatttttgatac 22980849  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    ||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||    
T  22980848 tatagtgttaacttcaccagaaaagtcattctcataacttcatcataaaattttc 22980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 5837693 - 5837557
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||||||||  |||| || |||||||| || |||||||||| |||||||||||    |||||||||||| ||| ||||||||||| ||    
T  5837693 tgatgaattgatgatactatggagactgaaattttgatgtcactgtacaaacagtggggtgttac----tcacaacacttttgatgctatagtgttacct 5837598  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||||  ||||||||| |||||| || ||||||    
T  5837597 tcaccagaaaagtcattctcatgaattcaccgtagaatttt 5837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 7693366 - 7693230
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||| | ||| | |||||||||||||| |||||||||| |||| ||||||    |||||||||||| |||  |||||||||||||||    
T  7693366 atgaattgatgatactaagaggattgaacttttgatgccactgtacaaacagtgggatgttac----tcacaacacttttgatgttatagtgttaacttc 7693271  T
Q  118 accagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||||  || | |||||||||||||| ||||||||    
T  7693270 accagaaaagtcattttaatgacttcaccatagaattttcc 7693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 27330444 - 27330304
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||||| |  |||||||      | ||||||||| |||  |||||||||||    
T  27330444 tctgatgaattgatgatactatgaagactgaacttttgatgccattgtacaaacagtaaggtgtta------ctcaacacttttgatgttatagtgttaa 27330351  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||||  ||| || |||||||||||| ||||||||||    
T  27330350 cttcaccagaaaagtcattcccacgacttcaccatagaattttcctt 27330304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 30969350 - 30969485
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||| ||| | ||||||||    ||||||||||||||| |||  ||    
T  30969350 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtataaatagtggggtgt----tactcacaacacttttgatgtta 30969445  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttca 144  Q
    ||||||||||||||||||| || |  ||||||||||||||    
T  30969446 tagtgttaacttcaccagataaatcattctcatgacttca 30969485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 5112352 - 5112490
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    ||||||| | | |||  ||  |||||| ||||||||    
T  5112352 atgaattgatgatactatggggactgaacttttgatgccactgtacaaacagtggggtgt----tactcactatattttttatgttatagtattaacttc 5112447  T
Q  118 accagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||| ||||||  || |||||||||||||||||||||||||||    
T  5112448 accaaaaaagtcattttcatgacttcaccataaaattttcctt 5112490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 22019770 - 22019632
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||| ||||||||||| | ||||||||||||||||| || | |||||||| |||||||||||    |||||||||||| ||| ||||||| ||||||    
T  22019770 tgatgaagtgatgatactaaggggacttaacttttgatgtcactatacaaacaatggggtgttac----tcacaacacttttgattctatagttttaact 22019675  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||||||  |||| || ||||||||||| || |||||    
T  22019674 tcaccagaaaagtcattctaataacttcaccatagaaatttcc 22019632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 699301 - 699152
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| ||||  |||| ||||||||||| || |||||||||| ||||||||    ||||||| | | |||  || |    
T  699301 agtcttgttaatctgatgaattgatgatattatgatgactgaacttttgatgtcactgtacaaacagtggggtgt----tactcactagattttttatgc 699206  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||||||| |||||||||  ||||||| ||||||||||||||||||    
T  699205 tatagtgttaacttcatcagaaaagtcattctcataacttcaccataaaatttt 699152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 24886255 - 24886099
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | |||||| |||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||  ||| ||| |||      
T  24886255 agtcttgttaatatgatgagttgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacatttttgatgt 24886160  T
Q  103 tatagtgttaacttcacc--agaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    |||||| |||||||||||  | ||||||  ||||||||| |||||||||||||||||||||    
T  24886159 tatagtattaacttcaccaaaaaaaagtcattctcatgatttcaccataaaattttccttt 24886099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 1429169 - 1429321
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | |||||||||||||||||||||  |||| || ||||||||||| |||||||||| |||||||||||    |||| | | ||| ||| |    
T  1429169 agtcttgttaatttgatgaattgatgatactatggagactgaatttttgatgccagtgtacaaacagtggggtgttac----tcactatatttttgatgc 1429264  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||||||| || |||  || |||||||||||||||| | |||||||    
T  1429265 tatagtgttaacttcaccaaaagagtcattttcatgacttcaccatagatttttcct 1429321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 15724626 - 15724490
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||| |||| ||||| |||||| |||| ||||||| ||||| |||||||||||    |||||| ||||| |||  |||||||||||||    
T  15724626 tgatgaattgatgatattatg-ggactgaacttt-gatgtcattgtataaacagtggggtgttac----tcacaaaacttttgatgttatagtgttaact 15724533  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||| ||||||  ||||||| ||||||||||| ||||||||    
T  15724532 tcaccaaaaaagtcattctcataacttcaccatagaattttcc 15724490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 39572968 - 39572818
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||| ||||||||||| | ||| ||||||||||| || || ||||||| ||| |||||||    |||||||| |||  ||| ||    
T  39572968 tcttgttaatctgatgaatttatgatactatgagaactgaacttttgatgtcactgcacaaacagtggagtgttac----tcacaacattttttatatta 39572873  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||| ||||||| || ||||||||  ||||||||||||||||||| |||||||||    
T  39572872 tagtattaacttaactagaaaagtcattctcatgacttcaccatagaattttcct 39572818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 8466882 - 8466743
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||| | |||||||||| ||| |||||||| |  |||||||||     |||||||||||| |||  || ||||||||||    
T  8466882 tgatgaattgatgatactatggggattgaacttttgataccactgtacaaagag-ggggtgttat----tcacaacacttttgatgttacagtgttaact 8466788  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||  |||||||||| ||| |||| ||||||||||    
T  8466787 tcaccagaaaagtcattctcatgacctcatcatagaattttcctt 8466743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 31786669 - 31786821
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| ||| | |||||||||||||| |||||||||| |||||      || ||||| ||| |||  ||     
T  31786669 cagtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgccactgtacaaacagtgggg----cagtgctcactacatttttcatg 31786764  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||||||||||||| ||||||  ||||||  ||||||| ||| ||||||||    
T  31786765 ctatagtgttaacttcaccaaaaaagtcattctcactacttcactatagaattttcc 31786821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 32563298 - 32563150
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| || | ||||| ||||||||||| || |||||| ||| ||| |||||||    |||||||||||| |||  ||    
T  32563298 tcttgttaatctgatgaattgatgatattaaggggactgaacttttgatgtcactgtacagacagtggagtgttac----tcacaacacttttgatgtta 32563203  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    |||||||||||||| ||||||| |  || | |||||||||||||| |||||||    
T  32563202 tagtgttaacttcatcagaaaaatcattttaatgacttcaccatagaattttc 32563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 38528260 - 38528413
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| |||||||||||||||||||||||  |||| ||||||||||| || |||| ||||| ||||||||    ||||||  ||| ||| |||     
T  38528260 cagtcttgttaatctgatgaattgatgatactatg-agactgaacttttgatgtcactgtataaacaatggggtgt----tactcattacaattttgatg 38528354  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
     |||||||||||||||| |||||||    || |||||||||||||||| ||||||||||    
T  38528355 ttatagtgttaacttcatcagaaaaaccattttcatgacttcaccatagaattttcctt 38528413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 14409350 - 14409501
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| | ||| ||||||||||||||  |||  || | ||||||| |||    |||| ||| ||| |||     
T  14409350 cagtcttgttaatctgatgaattgatgatactatgag-actgaacttttgatgccaccgtattaagagtggggtgctac----tcactacatttttgatg 14409444  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
     ||||||||| |||||||||||||| |  ||||||||||||||||||| ||||||||    
T  14409445 ttatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 14409501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 33908385 - 33908245
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| |||||  |||||||||||||||| ||||| ||||||||||||||  ||||||||| ||| |||     ||||||| ||||||| |||     
T  33908385 cagtcttgttaatctgaataattgatgatactatgaggactgaacttttgatgccaccgtacaaacagtggagtg----ctactcactacacttttgatg 33908290  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcacc 146  Q
     ||||||||| |||||||||||||  |  ||||||||||||||||    
T  33908289 atatagtgttgacttcaccagaaagttcattctcatgacttcacc 33908245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 11898139 - 11898004
Alignment:
Q  17 gatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaactt 116  Q
    |||||||||||||||||||| ||||| ||||||||||| || |||||||  | | |||||||||    |||   |||||| ||| ||||| | |||||||    
T  11898139 gatgaattgatgatactatgaggactaaacttttgatgtcactgtacaactagtagggtgttac----tcagtgcacttttgatgctataatattaactt 11898044  T
Q  117 caccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
     |||||||||||| || ||||||||||||| |||||||||    
T  11898043 taccagaaaagttattatcatgacttcaccctaaaatttt 11898004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 27318511 - 27318650
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | |||||||||||||||||| || | ||| ||||||||||| ||||||||||||| ||| ||||    ||||||| ||| |||  ||      
T  27318511 agtcttgttaatatgatgaattgatgatactgtgagaactaaacttttgatgtcattgtacaaacagtggtgtgt----tactcactacattttttatgt 27318606  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcacc 146  Q
    | |||||||||||||||||||||| |  ||||||||||||||||    
T  27318607 tttagtgttaacttcaccagaaaaatcattctcatgacttcacc 27318650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 22255333 - 22255256
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| |||||||||||||||||| |||| | ||| ||||||||||||||||||||||||  |||||||||||    
T  22255333 agtcttgttaatctgatgaattgatgataatatgagaactgaacttttgatgccattgtacaaacggtggggtgttac 22255256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 35933978 - 35933901
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||| ||| ||||||||||||||||| || |||| |  ||||||||||||||||||| |||||||||    
T  35933978 tactcacaacacttttgattctatagtgttaacttcatcaaaaaaatcattctcatgacttcaccatacaattttcct 35933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 23116257 - 23116397
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||||||||||||||||  ||| |||||||||| ||| |||||||||| |||||||     ||||||| ||| ||| |||  |||| ||||||    
T  23116257 tctgatgaattgatgatactatgtaaactgaacttttgattccactgtacaaacagtggggtg----ctactcactacagttttgatgttataatgttaa 23116352  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||  | ||||||  || ||||||| |||||||| ||||||||    
T  23116353 cttcataaaaaaagtcattttcatgacgtcaccatagaattttcc 23116397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 25668798 - 25668687
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||| ||||||||||||||||| | ||||| |||||||||||||| ||| |||||| ||||||||    ||||||||||||||| |||  ||    
T  25668798 tcttgttaatctaatgaattgatgatactaaggggactgaacttttgatgccactgttcaaacagtggggtgt----tactcacaacacttttgatgtta 25668703  T
Q  105 tagtgttaacttcacca 121  Q
     ||||||||||||||||    
T  25668702 -agtgttaacttcacca 25668687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 12910495 - 12910348
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtac-----aaacactggggtgttacgtactcacaacactttcgatactatagt 108  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| || |||||     ||||| |||||||||||| |||    | | ||| |||  ||||||    
T  12910495 tctgatgaattgacgatactatgaggactgaacttttgatgtcactgtactgtacaaacagtggggtgttacgcact----atatttttgatgttatagt 12910400  T
Q  109 gttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
     |||||||||||| ||||||  || |||||||||||||||| ||||||||||    
T  12910399 tttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcctt 12910348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 162
Target Start/End: Original strand, 22974106 - 22974261
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||| |||| | | | |||||||||||  |||||||||||| |||| ||||||    |||  ||  ||| |||      
T  22974106 agtcttgttattctgatgagttgatgataatatgagaattgaacttttgatgttattgtacaaacagtgggatgttac----tcattacttttttgatgt 22974201  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttt 162  Q
    ||||||||||||||||||| |||| |  ||||||| ||||||||||| ||||||||||||    
T  22974202 tatagtgttaacttcaccaaaaaaatcattctcataacttcaccatagaattttcctttt 22974261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 21088803 - 21088864
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgt 77  Q
    |||||||||| |||||||||| ||||| ||||||||||| ||||||||||||| ||||||||    
T  21088803 tgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgt 21088864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 35826522 - 35826660
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||| ||||||||||||| ||||| ||||||||||| || |||||||||| ||  ||||    ||||||  ||| ||| |||  |||||| ||||||||    
T  35826522 atgaactgatgatactatgaggactgaacttttgatgtcactgtacaaacaatgaagtgt----tactcagtacatttttgatgttatagtattaacttc 35826617  T
Q  118 accagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    || | ||||||  || |||||||||||||||| ||||||||||    
T  35826618 acaaaaaaagtcattatcatgacttcaccatagaattttcctt 35826660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15992566 - 15992636
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggt 75  Q
    |||| ||| |||||||||||||||||||||||  |||| ||||||||||| || |||||||||| ||||||    
T  15992566 tcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcactgtacaaacagtggggt 15992636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 43308688 - 43308746
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggg 73  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||| |||| ||||    
T  43308688 ctgatgagttgatgatactatgaggactgaacttttgatgccattgtacgaacagtggg 43308746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 8437097 - 8436979
Alignment:
Q  23 ttgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccag 122  Q
    |||||||||  ||| ||||| ||||||||||| || |||||||||| |||| ||||||    |||| ||||||| ||  |||||||||||| |||||||     
T  8437097 ttgatgatataatgaggactgaacttttgatgtcactgtacaaacaatgggatgttac----tcactacactttggaagctatagtgttaatttcaccaa 8437002  T
Q  123 aaaagttgttctcatgacttcac 145  Q
    |||| |  |||||||||||||||    
T  8437001 aaaaatcattctcatgacttcac 8436979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 14919565 - 14919707
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||| |||||||||||||| ||||| ||||||||||| |||| || ||||| || |||||    ||||||  ||| ||| |||  |||| ||||||||    
T  14919565 tgatgagttgatgatactatgaggactgaacttttgatgtcattatataaacagtgaggtgt----tactcattacatttttgatgttataatgttaact 14919660  T
Q  116 tca-ccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    ||| | | |||| |  ||||||||||||||||||| |||||||||||    
T  14919661 tcatcaaaaaaaataattctcatgacttcaccatataattttccttt 14919707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 16004475 - 16004552
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagt-tgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||| ||| |||  ||||||||||||||||||||||||||   |||||||||||| |||||| ||||||||    
T  16004475 tactcacaacatttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccatagaattttcc 16004552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 28416553 - 28416663
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| || |  || | |||||||||| ||| |||||||||| |||| ||||||    |||||| ||||| |||| ||    
T  28416553 tcttgttaatctgatgaattgatgatattaaggagattgaacttttgattccactgtacaaacagtgggatgttac----tcacaatacttttgatatta 28416648  T
Q  105 tagtgttaacttcac 119  Q
    |||||||||||||||    
T  28416649 tagtgttaacttcac 28416663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 31705636 - 31705785
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||| | |||||  |||||||||| ||||||||||||  | ||||||    |||||   ||| ||| |||      
T  31705636 agtcttgttaatctgatgaattgatgatacta-gaggactggacttttgatgtcattgtacaaacggtagggtgt----tactcgttacatttttgatgt 31705730  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    ||||||||||||||||||| |||| |  || | |||||||||||||| |||||||    
T  31705731 tatagtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattttc 31705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 5830034 - 5829975
Alignment:
Q  21 aattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||  | |||||||||    
T  5830034 aattgatgatactatgaggactaaacttttgatgtcattgtacaaacggtagggtgttac 5829975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 13380549 - 13380498
Alignment:
Q  104 atagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattt 155  Q
    |||| ||||||||||| ||||||||  |||||||||||||||||||||||||    
T  13380549 atagggttaacttcactagaaaagtcattctcatgacttcaccataaaattt 13380498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 22616542 - 22616491
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    |||||||||||||||||||  || |||||||||||||||| |||||||||||    
T  22616542 ttaacttcaccagaaaagtcattttcatgacttcaccatagaattttccttt 22616491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 35511501 - 35511652
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||| ||||| ||||  |||| ||||||||||| || | |||||||| ||| ||||    ||||||| ||| | | |||      
T  35511501 agtcttgttaatctgatgaattggtgatagtatgatgactgaacttttgatgtcactttacaaacagtggagtgt----tactcactacagtgttgatgt 35511596  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||| ||||||||||| |||||| ||  || ||||||||||||||||  |||||||    
T  35511597 tataatgttaacttcatcagaaacgtcattttcatgacttcaccataggattttcc 35511652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 7208888 - 7208964
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| ||||||||||||||||||||| | ||||| ||||||||||| || |||||||||  | |||||||||    
T  7208888 agtcttgttaatctgatgaattgatgatacta-gaggactgaacttttgatgtcaatgtacaaacggtagggtgttac 7208964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 36055874 - 36055923
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||| ||||||||  |||||||||| ||||||||||||||||||    
T  36055874 ttaacttcacaagaaaagtcattctcatgacatcaccataaaattttcct 36055923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 26317804 - 26317859
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||||| ||||||  || ||||||||||| |||| ||||||||    
T  26317804 tatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaattttcc 26317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 13956444 - 13956522
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||| ||| ||| |||  ||||||||||||||||  ||||||||  || ||||||||||||| || ||||||||||    
T  13956444 tactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttcctt 13956522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 23954813 - 23954891
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgcca-ttgtacaaacactggggtgttac 80  Q
    |||||| ||| | |||||||||||||||||||||   ||| |||||||||||||| | ||| ||||| |||||||||||    
T  23954813 agtcttgttaatatgatgaattgatgatactatggaaactgaacttttgatgccactagtaaaaacagtggggtgttac 23954891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 27579087 - 27579038
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||| |||||| ||| ||| || |||||||||||||||||||    
T  27579087 ttaacttcaccaaaaaagtcgttttcacgatttcaccataaaattttcct 27579038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 35934044 - 35933992
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgcca 57  Q
    |||| ||| |||||||||||||||||||||||  ||||  |||||||||||||    
T  35934044 tcttgttaatctgatgaattgatgatactatggtgactggacttttgatgcca 35933992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 5e-39; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 8513371 - 8513232
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||| |||| ||||| ||||||||||| || |||||||||| |||||||||||    |||||||||||| |||| |||||||||||||    
T  8513371 tgatgaattgatgatattatggggactgaacttttgatgtcactgtacaaacagtggggtgttac----tcacaacacttttgatattatagtgttaact 8513276  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||||  ||||||||||||||||||| |||||||||    
T  8513275 tcaccagaaaagtcattctcatgacttcaccatagaattttcct 8513232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 3879974 - 3880124
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||| | ||||||||||| ||||||||||||| | |||||||||    |||||||||||| |||||||    
T  3879974 tcttgttagtctgatgaattgatgatactatggggattgaacttttgatgtcattgtacaaacagtagggtgttac----tcacaacacttttgatacta 3880069  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    || |||||||||||||||||||||  ||||| ||||||||||||| |||||||||    
T  3880070 taatgttaacttcaccagaaaagtcattctcgtgacttcaccatagaattttcct 3880124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 6089057 - 6088910
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||  |||| |||||||||||||| | |||||||| ||||| |||||    |||||||||||| |||||||    
T  6089057 tcttgttaatctgatgaattgatgatactatggtgactgaacttttgatgccactttacaaacagtggggcgttac----tcacaacacttttgatacta 6088962  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||||||||||||| |  ||||||||||||||||||| ||||||    
T  6088961 tagtgttaacttcaccagaaaaatcattctcatgacttcaccatagaatttt 6088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 4318858 - 4319016
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||| ||||||||||||||||||| ||  | ||||||||||| || |||||||||| |||||||||||    ||| |||||||| |||  ||    
T  4318858 tcttgttaatctaatgaattgatgatactatgggggttgaacttttgatgtcactgtacaaacagtggggtgttac----tcataacacttttgatgtta 4318953  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttttatta 167  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||    
T  4318954 tagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcctttttatta 4319016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 21017147 - 21017294
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||    ||||||||||| |||  ||||||    
T  21017147 tcttgttagtctgatgaattgatgatactatggggactgaacttttgatgccattgtacaaataatggggtgt----tactcacaacattttttatacta 21017242  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
     | |||||||||||||| ||||||  || || |||||||||| || ||||||    
T  21017243 caatgttaacttcaccaaaaaagtcattttcgtgacttcaccgtataatttt 21017294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 29182312 - 29182165
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| ||||  |||| ||||||||||| || |||| ||||| ||||||||    ||||||||||||||| |||  ||    
T  29182312 tcttattaatctgatgaattgatgataatatggagactgaacttttgatgacactgtataaacagtggggtgt----tactcacaacacttttgatgtta 29182217  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||||| ||  ||| |  ||||||||||||||||||||||||||    
T  29182216 tagtgttaacttcatcaataaaatcattctcatgacttcaccataaaatttt 29182165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 33618986 - 33618834
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| | ||| ||||||||||||||  ||||||| | |||| ||     ||||||| ||||||| |||     
T  33618986 cagtcttgttaatctgatgaattgatgatactatgagaactgaacttttgatgccaccgtacaaataatgggttg----ctactcactacacttttgatg 33618891  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    | |||||||| ||||||||||||||||  ||| |||||||||||| || ||||||||    
T  33618890 cgatagtgttgacttcaccagaaaagtatttcccatgacttcaccgtagaattttcc 33618834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 18498565 - 18498427
Alignment:
Q  23 ttgatgatactatgtggacttaacttttgatgccattgtacaaacactgggg-tgttacgtactcacaacactttcgatactatagtgttaacttcacca 121  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||  ||||| |||| |    |||| ||||||| ||| ||||| ||||||||||||||    
T  18498565 ttgatgatactatgaggactgaacttttgatgccactgtacaaactgtgggggtgttgc----tcactacacttttgatgctataatgttaacttcacca 18498470  T
Q  122 gaaaagttgttctcatgacttcaccataaaattttccttttta 164  Q
    | |||||  ||||||||||||||| ||| | ||||||||||||    
T  18498469 ggaaagtcattctcatgacttcactatagatttttccttttta 18498427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 15491764 - 15491631
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| || || |||||||||||||| |||||||| | ||||||||    ||||||||||||||| |||  ||    
T  15491764 tcttgttaatctgatgaattgatgatactatgagggctgaacttttgatgccactgtacaaatagtggggtgt----tactcacaacacttttgatgtta 15491669  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgactt 142  Q
     | |||||||||||| ||||||||  ||||||| ||||    
T  15491668 caatgttaacttcacgagaaaagtcattctcataactt 15491631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 33893038 - 33893186
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||||| ||||||| ||  ||||||||||| | |||||||||||    |||||||||||| |||  ||    
T  33893038 tcttgttaatctgatgaattgatgatactaag-ggactgaacttttaatatcattgtacaaatagtggggtgttac----tcacaacacttttgatgtta 33893132  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||| | |||| || |||| ||||||| |||||| ||||||||    
T  33893133 tagtgttaacttcactaaaaaaattattctaatgactttaccatagaattttcc 33893186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 7235067 - 7235218
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| |||||||||||||| ||||||||  |||| ||||||||||| ||  ||||||||| |||||||     ||||||| ||||||| |||     
T  7235067 cagtcttgttaatctgatgaattgataatactatg-agactgaacttttgatggcaccgtacaaacagtggggtg----ctactcactacacttttgatg 7235161  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
     ||||||||| |||||||| |||||||  ||||||| ||||||||||| ||||||||    
T  7235162 ttatagtgttgacttcaccggaaaagtcattctcataacttcaccatagaattttcc 7235218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 20768233 - 20768087
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||| ||||||||||| ||||| |||||||||||||| |  ||||||| |||     | | ||||||| ||||||| ||| |||    
T  20768233 tcttgttaatctgatgaattaatgatactatgaggactgaacttttgatgccacta-acaaacaatgga----tgc-tactcactacacttttgatgcta 20768140  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||| |||||||    
T  20768139 tagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaattttc 20768087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 30353404 - 30353540
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||||||||  |||| |||| | ||||||| |||||||||| || | | ||||    || ||||||||| |||  |||| ||||||||    
T  30353404 tgatgaattgatgatactatggagactgaactatcgatgccactgtacaaacagtgagatattac----tcgcaacacttttgatgttataatgttaact 30353499  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||||  ||||||||||||||||||| ||||||    
T  30353500 tcaccagaaaagtcattctcatgacttcaccatagaatttt 30353540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 1945972 - 1945831
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||| ||||||||||| || || ||||||||||| |||| |||||||| ||||||||    ||||||  ||| ||| |||  |||||||||||||    
T  1945972 tgatgaattcatgatactatgagggctgaacttttgatgtcattctacaaacagtggggtgt----tactcattacatttttgatgttatagtgttaact 1945877  T
Q  116 tcacc-agaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||| | ||||||  |||| ||||||||||| || ||||||||||    
T  1945876 tcaccaaaaaaagtcattcttatgacttcaccgtagaattttcctt 1945831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 5627530 - 5627389
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    ||||||||||||| |||||||| || || ||||||||||| |||| |||||| | |||||||||||    |||  | | |||  ||  ||||||||||||    
T  5627530 ctgatgaattgataatactatgagggctgaacttttgatgtcattctacaaatagtggggtgttac----tcattatattttttatgttatagtgttaac 5627435  T
Q  115 ttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||| ||||||  |||| ||||||||||| || ||||||||||    
T  5627434 ttcaccaaaaaagtcattcttatgacttcaccttagaattttcctt 5627389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 7055260 - 7055400
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||||||||||||||||| || || ||||||||||| |||| |||||| | || ||||||||  | |    | | |||  ||  ||||||||||||    
T  7055260 ctgatgaattgatgatactatgagggctgaacttttgatgtcattctacaaatagtgaggtgttactaatt----atattttttatgttatagtgttaac 7055355  T
Q  115 ttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||| |||| |  |||| ||||||||||||||||||||||||    
T  7055356 ttcaccaaaaaaatcattcttatgacttcaccataaaattttcct 7055400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 11084152 - 11084204
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttt 162  Q
    ||||||| |||||||||||| || |||||||||||||||| ||||||||||||    
T  11084152 ttaactttaccagaaaagttattttcatgacttcaccatagaattttcctttt 11084204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 6091231 - 6091293
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||| | | ||| ||||||||||| ||||||||||||| ||| |||||||    
T  6091231 atgaattgatgatactacgagtactgaacttttgatggcattgtacaaacaatggtgtgttac 6091293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 19631797 - 19631747
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||||||||  |||| |||||||||||||| ||||||||||    
T  19631797 ttaacttcaccagaaaagtcattcttatgacttcaccatagaattttcctt 19631747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 19424682 - 19424832
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| | || ||||| |||||||||||    |||||||||||| |||  ||    
T  19424682 tcttgttaatctgatgaattgatgatactatgaggactaaacttttgatgccactatataaacaatggggtgttac----tcacaacacttttgatgtta 19424777  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  19424778 tagtgttaacttcaccagaaaagccattctcatgacttcaccataaaattttcct 19424832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 4167071 - 4166920
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| ||||||||    ||||||||| | ||| |||||||    
T  4167071 tcttgttagtctgatgaattgttgatactatggggactgaacttttgatgccattgtacaaacagtggggtgt----tactcacaatatttttgatacta 4166976  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    || |||||||||||||||||||||  || || ||||||||||||| ||||||||||    
T  4166975 taatgttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcctt 4166920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 13711613 - 13711460
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||| ||||||||| ||||||||||| || |||||||||  |||||||||||    |||||||||||| ||| |||    
T  13711613 tcttgttaatctgatgaattgatgataccatgtggactaaacttttgatgtcactgtacaaactgtggggtgttac----tcacaacacttttgatgcta 13711518  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttt 162  Q
    || |||||||||||||||||||||  |||| |||||||||||||| ||||||| ||||    
T  13711517 taatgttaacttcaccagaaaagtcattctgatgacttcaccatagaattttcatttt 13711460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 39167417 - 39167568
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||    ||||||||| ||||| |||||||    
T  39167417 tcttgttactctaatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgaggtgt----tactcacaatacttttgatacta 39167512  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |  ||||||||||| || |||| |  ||||| ||||||||||||||||||||||||    
T  39167513 ttctgttaacttcatcaaaaaaatcattctcgtgacttcaccataaaattttcctt 39167568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 36642124 - 36641988
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||||| ||||||||||| || |||||||||| || ||||||||    || ||||||||| ||| ||||||| |||| |    
T  36642124 tgatgaattgatgatactatgaggactgaacttttgatgtcactgtacaaacagtgaggtgttac----tcgcaacacttttgatgctatagtattaatt 36642029  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||||  ||||||||||||||||||| ||||||    
T  36642028 tcaccagaaaagtcattctcatgacttcaccatagaatttt 36641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 4264131 - 4264281
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| | |||||||||||| ||||||||  |||| ||||||||||| || |||||||||| |||| ||||||    |||||||||||| ||| |||    
T  4264131 tcttcttaatatgatgaattgataatactatggagactgaacttttgatgtcactgtacaaacagtgggatgttac----tcacaacacttttgatgcta 4264226  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||| |||||||||||  || | |||||||||||||| |||||||||    
T  4264227 tagtgttaactttaccagaaaagtcattatgatgacttcaccatagaattttcct 4264281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 31570788 - 31570939
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||| ||||||||||||||||| ||||||||||| || | || ||| | ||||||||||| |||    ||||||||  ||  ||    
T  31570788 tcttgttaatctgatgaattcatgatactatgtggactgaacttttgatgtcactataaaaatagtggggtgttacttac----aacacttttaatgtta 31570883  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||| ||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  31570884 tagtgttaatttcaccagaaaagttattctcataacttcaccatagaattttcctt 31570939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 33551038 - 33551189
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||||||||  |||  ||||||||||| ||||||||||||| ||||||||    ||||||| ||| ||| |||      
T  33551038 agtcttgttaatctgatgaattgatgatactatgaagaccgaacttttgatgtcattgtacaaacagtggggtgt----tactcactacatttttgatgt 33551133  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||| | ||||||  |||||||||||||||| || ||||||||    
T  33551134 tatagtgttaacttcactaaaaaagtcattctcatgacttcaccgtagaattttcc 33551189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 3177088 - 3176931
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| | | ||||    |||||| |||| ||| |||| ||    
T  3177088 tcttcttagtctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagttgcgtgt----tactcaaaacatttttgatatta 3176993  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttttatt 166  Q
    |||| ||||||||| |||||||||  || || | ||||||||||| |||||| || ||||||    
T  3176992 tagtattaacttcatcagaaaagtcattttcgtaacttcaccatagaatttttctctttatt 3176931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 4478518 - 4478406
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||| ||||    ||||||||||||||| |||  ||    
T  4478518 tcttgttaatctgatgaattgatgatactatgaggactaaacttttgatgccactgtacaaacaatggagtgt----tactcacaacacttttgatgtta 4478423  T
Q  105 tagtgttaacttcacca 121  Q
    |||||||||||||||||    
T  4478422 tagtgttaacttcacca 4478406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 41463915 - 41464051
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||| | |||||||||||||| |||||||||| || |||||    ||||||||||||||| |||  |||||| ||||||    
T  41463915 tgatgaattgatgatactatgaggattgaacttttgatgccactgtacaaacagtgaggtgt----tactcacaacacttttgattttatagtattaact 41464010  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||| ||| ||  |||||| |||||||||||| ||||||    
T  41464011 tcaccaaaaatgtcattctcacgacttcaccatagaatttt 41464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 27349993 - 27350143
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||||| ||||||||||| || |||||||||| || ||||||||    |||||||| ||| ||| |||    
T  27349993 tcttgttaatctgatgaattgatgatactaag-ggactgaacttttgatgtcactgtacaaacagtgtggtgttac----tcacaacatttttgatgcta 27350087  T
Q  105 tagtgttaacttcaccagaaaa-gttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||||| ||||  || || | ||||||||||||||||||||||||    
T  27350088 tagtgttaacttcaccaaaaaatattattttaatgacttcaccataaaattttcct 27350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 43770893 - 43771039
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| || | ||||| |||||||||||||| |||| ||||| ||||||||    ||||||||||||||| |||  ||    
T  43770893 tcttgttaatctgatgaattgatgatattaaggggactgaacttttgatgccactgtataaacagtggggtgt----tactcacaacacttttgatgtta 43770988  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    ||||||||||||||||| |||| |  |||| |||||||||||||| ||||||    
T  43770989 tagtgttaacttcacca-aaaaatcattctaatgacttcaccatagaatttt 43771039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 33660435 - 33660569
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||| | ||||| |||||||||||||| |||||||||| | ||||||    ||||||||||||||| |||  ||||||||||||||     
T  33660435 atgaattgatgatactaagaggactgaacttttgatgccactgtacaaacagttgggtgt----tactcacaacacttttgatgttatagtgttaactta 33660530  T
Q  118 accagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    || ||||||||  || | |||||||||||||| ||||||    
T  33660531 actagaaaagtcattttaatgacttcaccatagaatttt 33660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 19314000 - 19313852
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||  ||||| ||||||||||| || |||| ||| | |  |||||    ||||||||||||||| ||| |||    
T  19314000 tcttgttaatctgatgaattgatgatactat-aggactgaacttttgatgtcactgtataaatagtaaggtgt----tactcacaacacttttgatgcta 19313906  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    || |||||||||||||||||||||  |||| |||||||||||||| ||||||||    
T  19313905 taatgttaacttcaccagaaaagtcattctaatgacttcaccatagaattttcc 19313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 18494395 - 18494475
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttt 162  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||  || |||||||||||||| | ||||||||||||    
T  18494395 tactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcaccacagaattttcctttt 18494475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 2325442 - 2325577
Alignment:
Q  23 ttgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccag 122  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    ||||||  ||| ||  |||  |||| |||||||||||| ||    
T  2325442 ttgatgatactatgaggactgaacttttgatgccagtgtacaaacaatggggtgt----tactcaatacatttatgatgttatattgttaacttcacgag 2325537  T
Q  123 aaaagttgttctcatgacttcaccataaaattttcctttt 162  Q
    ||||||  ||| ||| ||||||||||| ||||||||||||    
T  2325538 aaaagtcattcacataacttcaccatagaattttcctttt 2325577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 44286089 - 44285951
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| | |||||||| || | | |    | ||| ||||||||| ||| ||||||||||||    
T  44286089 tctgatgaatttatgatactatgtggactaaacttttgatgccactatacaaacagtgagatat----tgctcgcaacacttttgatgctatagtgttaa 44285994  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    ||||| ||||||| |  ||| |||||||||||| || ||||||    
T  44285993 cttcatcagaaaaatcattcgcatgacttcaccgtataatttt 44285951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 41465585 - 41465509
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||| |||| || ||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||    
T  41465585 tactcactacacctttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 41465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 17071789 - 17071941
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||||||||   ||  ||||||||||| ||||||||||| | || | |||||| ||||    ||| ||| | |      
T  17071789 agtcttgttaatctgatgaattgatgatactatgaataccgaacttttgatgtcattgtacaaataatgagatgttacttact----acatttttgttgt 17071884  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||||||| ||||||  ||| ||||||||||||||| |||||||||    
T  17071885 tatagtgttaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcct 17071941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 37905857 - 37905782
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||  |||||||||||    
T  37905857 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttac 37905782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 19289375 - 19289452
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| |||||||| ||||||||||| || | ||||||||||||||| ||||||||||||| |||||||||||    
T  19289375 agtcttattaatctgatgagttgatgatactgtgagaacttaacttttgatgtcattgtacaaacaatggggtgttac 19289452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 26357687 - 26357577
Alignment:
Q  44 aacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttc 143  Q
    ||||||||||| || |||||||||| |||| ||||||    |||| ||| ||| |||  |||||||||||||||| |||||||||  || ||||||||||    
T  26357687 aacttttgatgtcactgtacaaacagtgggatgttac----tcactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttc 26357592  T
Q  144 accataaaattttcc 158  Q
    |||||||||||||||    
T  26357591 accataaaattttcc 26357577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 29242201 - 29242343
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||||||||  |||| |||||||||| ||| |||||||||| ||||||||||||    ||| | | |||  ||  |||||| ||||    
T  29242201 tctgatgaattgatgatactatgaagactgaacttttgataccactgtacaaacagtggggtgttacg----cactatattttttatgttatagttttaa 29242296  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||| ||||    || |||||||||||||||| ||||||||||    
T  29242297 cttcaccaaaaaaaccattttcatgacttcaccatagaattttcctt 29242343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 5881677 - 5881533
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacac-----tttcgatactatagtgt 110  Q
    ||||||||||||||||||| | ||||| ||||||||||| || |||||||||| ||||||||    ||||||||||||     ||| |||  |||| | |    
T  5881677 tgatgaattgatgatactaaggggactcaacttttgatgtcactgtacaaacagtggggtgt----tactcacaacacttttgttttgatgttataatat 5881582  T
Q  111 taacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
     |||||||||||||||||  || | |||||||||| |||||||||||||    
T  5881581 caacttcaccagaaaagtcattttaatgacttcacaataaaattttcct 5881533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 17054149 - 17054300
Alignment:
Q  4 gtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatact 103  Q
    ||||| ||| |||||||||||||||||| ||||   ||   |||||||||| ||||||||||||| || | |||||| ||||    ||| ||| |||  |    
T  17054149 gtcttgttaatctgatgaattgatgatattatgaataccgnacttttgatgtcattgtacaaacaatgagatgttacttact----acatttttgatgtt 17054244  T
Q  104 atagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||| |||||||||||| ||||||  ||| ||||||||||||||| |||||||||    
T  17054245 atagtattaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcct 17054300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 4763771 - 4763628
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatag---tgt 110  Q
    |||||||||||||| |||||||| | ||| ||||||||||| || |||||||||| ||||||||    ||||||| ||| ||| | |  |||||   |||    
T  4763771 tctgatgaattgattatactatgggaactgaacttttgatgtcactgtacaaacagtggggtgt----tactcactacagttttgttgatatagtgttgt 4763676  T
Q  111 taacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||| |||||||||  || ||||||||||| |||| ||||||||    
T  4763675 taacttcatcagaaaagtcattttcatgacttcatcatagaattttcc 4763628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 11366445 - 11366585
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||||||||||||||||| || || ||||||||||| |||| |||||| | || | |||    ||||||  ||| ||| |||  |||||||||||     
T  11366445 ctgatgaattgatgatactatgagggctgaacttttgatgtcattatacaaatagtgagatgt----tactcattacatttttgatgttatagtgttaat 11366540  T
Q  115 ttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||| ||||||  |||| |||| ||||||||| |||||||||    
T  11366541 ttcaccaaaaaagtcattcttatgatttcaccatagaattttcct 11366585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 19093461 - 19093410
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  19093461 ttaacttcaccagaaaaatcattctcatgacttcaccataaaattttccttt 19093410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 33902217 - 33902068
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||| |||||||||| || ||||| ||||||||||| |||| |||||||| |||||| |    ||||||| ||| |||   ||     
T  33902217 agtcttgttaatctgatgaactgatgatactttgaggactgaacttttgatgtcattttacaaacagtggggtat----tactcactacatttt--ttat 33902124  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
      ||||||||||||||||||||||||  |||| | ||||||| |||| ||||||||    
T  33902123 gttagtgttaacttcaccagaaaagtcattctaacgacttcatcatagaattttcc 33902068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 41960991 - 41960940
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatg 54  Q
    |||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  41960991 agtcttgttaatctgatgaattgatgatactatgtggactgaacttttgatg 41960940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 33709304 - 33709403
Alignment:
Q  23 ttgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccag 122  Q
    |||||||||||||| ||||| ||||||||||| || ||||| |||| ||| ||||    ||||| ||||||||| |||  |||||||||||||||||||     
T  33709304 ttgatgatactatggggactgaacttttgatgtcactgtactaacagtggagtgt----tactcgcaacacttttgatgttatagtgttaacttcaccat 33709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 44913812 - 44913662
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggactt-aacttttgatgccattgtacaaacac-tggggtgttacgtactcacaacactttcgatac 102  Q
    |||| ||| ||||||||||||||||||||||| ||  || ||||||| ||| |||| ||||||||  || ||||||||    |||||||| ||| |||||    
T  44913812 tcttgttagtctgatgaattgatgatactatgggggattgaactttttatgtcattttacaaacaagtgaggtgttac----tcacaacatttttgatac 44913717  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    || ||||||||||||| || ||||||  || || ||||||||||||| ||||||||    
T  44913716 tacagtgttaacttca-cataaaagtcattttcgtgacttcaccatagaattttcc 44913662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 41051268 - 41051379
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgcca-ttgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgtta 112  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| | ||||||| | ||  ||||||  ||  ||||||||||| ||| ||||||| |||    
T  41051268 tctgatgaattgatgatactatgaggactgaacttttgatgccactggtacaaatagtgaagtgtta--ta--cacaacacttttgatgctatagtatta 41051363  T
Q  113 acttcaccagaaaagt 128  Q
     ||||| |||||||||    
T  41051364 gcttcatcagaaaagt 41051379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 43648297 - 43648374
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| |||||||| ||||||||||||||  |||| ||||||||||| |||| |||||||| || ||||||||    
T  43648297 agtcttgttaatctgatgagttgatgatactatgatgactgaacttttgatgtcattatacaaacagtgaggtgttac 43648374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 22963448 - 22963395
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    ||||||| |||||||||||  |||| ||||||||||||||||||||||| ||||    
T  22963448 ttaactttaccagaaaagtcattcttatgacttcaccataaaattttccatttt 22963395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 22998029 - 22998082
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    ||||||| |||||||||||  |||| ||||||||||||||||||||||| ||||    
T  22998029 ttaactttaccagaaaagtcattcttatgacttcaccataaaattttccatttt 22998082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 18494343 - 18494383
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatg 54  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  18494343 tctgatgaattgatgatactatgaggactgaacttttgatg 18494383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 18947598 - 18947642
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaatt 154  Q
    |||||||||||||||||||| || |||||||||||||||| ||||    
T  18947598 ttaacttcaccagaaaagttattttcatgacttcaccatagaatt 18947642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 45327872 - 45327820
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatg 54  Q
    ||||||| ||| |||||||||||||||||||||||  |||| |||||||||||    
T  45327872 cagtcttgttaatctgatgaattgatgatactatgatgactgaacttttgatg 45327820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 7006991 - 7007050
Alignment:
Q  21 aattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||||||||||||| | ||| |||||||||||| | |||||||||| |||| ||||||    
T  7006991 aattgatgatactatgggaactaaacttttgatgctactgtacaaacagtgggatgttac 7007050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 6177823 - 6177773
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||||||||  ||||||||||||| || || ||||||||||    
T  6177823 ttaacttcaccagaaaagtcattctcatgacttcgccgtagaattttcctt 6177773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 39788580 - 39788626
Alignment:
Q  113 acttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||| ||||||||  |||| ||||||||||||||||||||||||    
T  39788580 acttcactagaaaagtcattcttatgacttcaccataaaattttcct 39788626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 18514771 - 18514819
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||| || ||||||  ||||||||||||||| ||||||||||||    
T  18514771 ttaacttcatcaaaaaagtcattctcatgacttcactataaaattttcc 18514819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 31861943 - 31861895
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||||| ||||||  ||||||| ||||||||||| ||||||||    
T  31861943 ttaacttcaccaaaaaagtcattctcataacttcaccatagaattttcc 31861895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 43446463 - 43446511
Alignment:
Q  111 taacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||  ||||||  ||||||||||||||||||| |||||||||    
T  43446463 taacttcaccgaaaaagtcattctcatgacttcaccatagaattttcct 43446511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 78; Significance: 5e-36; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 283 - 133
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||    ||||||||||| |||  ||||||    
T  283 tcttgttagtctgatgaattgatgatactatgaggactgaacttttgatgccattgtacaaacagtggagtgt----tactcacaacattttttatacta 188  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
     |||||||||||||||||||||||  || || ||||||||||||| |||||||||    
T  187 cagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcct 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 94417 - 94538
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||| |||||||||||||| |||| ||||  |||||||||||||| |||||||||| ||||||||    ||||||| ||| ||| |||      
T  94417 agtcttgttaatctcatgaattgatgatagtatggggaccaaacttttgatgccactgtacaaacagtggggtgt----tactcactacaattttgatgt 94512  T
Q  103 tatagtgttaacttcaccagaaaagt 128  Q
    |||| ||||||||||| |||||||||    
T  94513 tataatgttaacttcatcagaaaagt 94538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 408463 - 408526
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaac 67  Q
    |||||| ||| ||||||||||||||||||||| | ||||| ||||||||||  |||| |||||||    
T  408463 agtcttgttaatctgatgaattgatgatacta-gaggactgaacttttgatttcattttacaaac 408526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 5e-36; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 5657529 - 5657667
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||||||||  |||| |||||||||||||| |||||||||| |||||||||||    |||||||||||| |||  |||||||||||||    
T  5657529 tgatgaattgatgatactatgaagactgaacttttgatgccactgtacaaacagtggggtgttac----tcacaacacttttgatgttatagtgttaact 5657624  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||| ||||||||  ||||||||||||||||||| ||||||||    
T  5657625 tcactagaaaagtcattctcatgacttcaccatagaattttcc 5657667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 8861400 - 8861260
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||     ||| |||||||| ||| ||||||||||||    
T  8861400 tctgattaattgatgatactatggggacttaacttttgatgccactgtacaaacagtggggtgttat----tcataacacttttgatgctatagtgttaa 8861305  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||| | ||||||||  ||||||||||||||||||| ||||||||    
T  8861304 cttcgcgagaaaagtcattctcatgacttcaccatagaattttcc 8861260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 4583043 - 4582894
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||| |||||||||| ||||| ||||||||||| ||||||||||| | |||||||||||    |||||||| ||| |||||||    
T  4583043 tcttgttagtctgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaatagtggggtgttac----tcacaacatttttgatacta 4582948  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||| |||||||||||||||||||  || || ||||||||||||| ||||||||    
T  4582947 tagtattaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcc 4582894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 21991760 - 21991610
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| || |||||||||| ||||||||    ||||| ||||| ||| ||| |||    
T  21991760 tcttgttaatctgatgaattgatgatactatggggactgaacttttgatgacactgtacaaacagtggggtgt----tactcgcaacaattttgatgcta 21991665  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||||| |||| |  |||||||||||||||| || |||||||||    
T  21991664 tagtgttaacttcaccataaaaatcattctcatgacttcaccctagaattttcct 21991610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 12165876 - 12165727
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||    |||||||||||||||||||| |||||||||| |||||||||||    |||||||||||| ||| |||    
T  12165876 tcttgttaatctgatgaattgatgatacttaagggacttaacttttgatgccactgtacaaacagtggggtgttac----tcacaacactttggatgcta 12165781  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||||||||||  || | | ||||||||| || ||||||||    
T  12165780 tagtgttaacttcaccagaaaagtcattttaacgacttcaccgtagaattttcc 12165727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 15612796 - 15612944
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| |||  ||||| |||||||||||||| | |||||||||||||||||    |||||| |||||||| |||  ||    
T  15612796 tcttgttaatctgatgaattgatgatattatagggactgaacttttgatgccactctacaaacactggggtgt----tactcataacacttt-gatgtta 15612890  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||    
T  15612891 tagtgttaacttcacaagaaacgttattctcatgacttcaccatagaattttcc 15612944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 29173653 - 29173545
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||| ||||    ||||||||||||||| ||||||| ||||||||||    
T  29173653 tgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggagtgt----tactcacaacacttttgatactacagtgttaact 29173558  T
Q  116 tcaccagaaaagt 128  Q
    |||||||||||||    
T  29173557 tcaccagaaaagt 29173545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 12390665 - 12390821
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||| |||||||| |||| |||||||||||| || || ||||||| |||| ||||||    |||  ||||||| |||      
T  12390665 agtcttgttaatctgatgaattgataatactatggggacataacttttgatgtcactgcacaaacagtgggatgttac----tcattacacttttgatgt 12390760  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    ||||||||||||||||||| |||||| | ||| |||||||||||||| |||||||||||||    
T  12390761 tatagtgttaacttcaccaaaaaagtcgatctgatgacttcaccatagaattttccttttt 12390821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 30055653 - 30055497
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||    |||  ||| ||| ||||     
T  30055653 agtcttgttaatctgatgaattaatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttac----tcattacaattttgatat 30055558  T
Q  103 tatagtgttaacttcaccagaaaa-gttgttctcatgacttcaccataaaattttcctttt 162  Q
    |||||||||||||||| || |||| ||  |||| |||||||||||||| ||||||||||||    
T  30055557 tatagtgttaacttcatcaaaaaaagtcattcttatgacttcaccatagaattttcctttt 30055497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 41765112 - 41765266
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| |||||  |||||||||||||  ||||||||| |||||||     ||||||| ||||||| |||     
T  41765112 cagtcttgttaatctgatgaattgatgatactatgaggactggacttttgatgccaccgtacaaacagtggggtg----ctactcactacacttttgatg 41765207  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||| || |||| | |||||||||  ||||||||||||||||||  ||||||||||    
T  41765208 ctatagtattgactttatcagaaaagtcattctcatgacttcaccatggaattttcctt 41765266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 43686164 - 43686015
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||| |||||||||  ||||| ||||||||||||||||||||||||| | ||||||    ||||||||||| ||| |||| ||    
T  43686164 tcttgttagtctgatgaattgttgatactatagggactgaacttttgatgccattgtacaaacagt-gggtgt----tactcacaacatttttgatatta 43686070  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||||  ||||||  || || ||||||||||||| |||||||||    
T  43686069 tagtgttaacttcacccaaaaagtcattttcgtgacttcaccatagaattttcct 43686015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 32821088 - 32821241
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||| ||||    ||||||| ||| ||| |||      
T  32821088 agtcttgttaatctaatgaattgatgatactacgaggactgaacttttgatgccattgtacaaacagtggtgtgt----tactcactacatttttgatgt 32821183  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||| |||||||||||||| |||| |  || |||||||||||||||| ||||||||||    
T  32821184 tatattgttaacttcaccaaaaaaatcattttcatgacttcaccatagaattttcctt 32821241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 26524375 - 26524515
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||| |||||||||||||||| |||||  ||||||||||||| || ||||||| ||| ||||||     |||||||| ||| |||  ||||||||||||     
T  26524375 tgataaattgatgatactatgaggactggacttttgatgccactgcacaaacaatggagtgttag----tcacaacatttttgatgttatagtgttaaca 26524470  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||  ||||||||||||||||||| ||||||||||    
T  26524471 tcaccagaaaagtcattctcatgacttcaccatagaattttcctt 26524515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 48928601 - 48928748
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||| |||||||| ||||| ||||||||||| ||  ||||||| | |||||||     ||||||| ||||||| |||  ||    
T  48928601 tcttgttaatctgatgaattgataatactatg-ggactgaacttttgatggcaccgtacaaatagtggggtg----ctactcactacacttttgatgtta 48928695  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  48928696 tagtgttgacttcaccagaaaagtcattctcatgacttcaccataaaattttc 48928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 22687354 - 22687228
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||| || ||||||| ||| ||||    ||||||||||| ||| |||  |||||||||||    
T  22687354 tctgatgaattgatgatactatggggactgaacttttgataccactgcacaaacagtggagtgt----tactcacaacatttttgatgttatagtgttaa 22687259  T
Q  114 cttcaccagaaaagttgttctcatgacttca 144  Q
    ||||| |||||||||  ||||||||||||||    
T  22687258 cttcatcagaaaagtcattctcatgacttca 22687228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 32432576 - 32432431
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||  |||| ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |     |    
T  32432576 tcttgttagtctgatgaattgatgatactatggagactgaacttttgatgtcattgtacaaacaatggggtgt----tactcacaacatttttg-----a 32432486  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||||||||||||| |  || || ||||||||||||| |||||||||    
T  32432485 tagtgttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttcct 32432431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 24211855 - 24211711
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||||||||||||||||| || || |||||||||||||||| || ||||| | ||||||    ||||||  ||| ||| |||  ||||||||||||    
T  24211855 ctgatgaattgatgatactatgagggctgaacttttgatgccattctataaacagtagggtgt----tactcattacatttttgatgttatagtgttaac 24211760  T
Q  115 ttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    ||||||| ||||||  |||| |||||||||||||| ||||||| |||||    
T  24211759 ttcaccaaaaaagtcattcttatgacttcaccatagaattttctttttt 24211711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 26980436 - 26980328
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||| |||| ||||| |||||||||||||| |||||||||  ||||||||    ||||||||||||||| ||| ||||| ||||||||    
T  26980436 tgatgaattgatgatattatggggactgaacttttgatgccactgtacaaaccgtggggtgt----tactcacaacacttttgatgctataatgttaact 26980341  T
Q  116 tcaccagaaaagt 128  Q
    |||||| ||||||    
T  26980340 tcaccataaaagt 26980328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 25691592 - 25691729
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||| |||||||  | ||| |||| ||||||||| |||||||||| || |||  |   ||||||||| ||||| |||  |||||||||||||    
T  25691592 tgatgaattgataatactataagaactgaactgttgatgccactgtacaaacagtgaggtaat---tactcacaatacttttgatgttatagtgttaact 25691688  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||| ||||||||  ||||||||||||||||||||||||||    
T  25691689 tcacgagaaaagtcattctcatgacttcaccataaaatttt 25691729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 18797453 - 18797302
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| |||||||||||||| ||| | ||||||||||| ||||||||||||| ||||||||    ||||||  ||| |||   ||     
T  18797453 agtcttgttaatctgatgagttgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacatttt--ttat 18797360  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
      ||||||||||||||||| ||||||  ||||||||||||||||||| ||||||||||    
T  18797359 gttagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcctt 18797302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 6546643 - 6546494
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||   | | |||||||||||  | |||||||| | |||||||||||    || ||||||||| ||| |||    
T  6546643 tcttgttaatctgatgaattgatgatactatggatagtaaacttttgatgttactgtacaaatagtggggtgttac----tcgcaacacttttgatgcta 6546548  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||| |||||| |  |||| |||||||||||||| ||||||||    
T  6546547 tagtgttaacttcactagaaaaatcattcttatgacttcaccatagaattttcc 6546494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 33688299 - 33688446
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||   |||| |||||||||||||| || ||||||| | || |||    |||||| |||||||| |||  ||    
T  33688299 tcttgttaatctgatgaattgatgatactatagagactgaacttttgatgccactggacaaacagtaggatgt----tactcataacacttttgatgtta 33688394  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    |||||||||||| |||||||||||  ||||||| ||||||||||| |||||||    
T  33688395 tagtgttaactt-accagaaaagtcattctcataacttcaccatataattttc 33688446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 34362205 - 34362334
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||||| | ||| |||||| ||||||| |||||||||| |||||||||||    |||||||||||| ||| |||||||||||||||  | |||    
T  34362205 tgatgatactatgagaactgaacttt-gatgccactgtacaaacagtggggtgttac----tcacaacacttttgatgctatagtgttaactttcctaga 34362299  T
Q  124 aaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||  ||||||| | ||||||||| ||||||||    
T  34362300 aaagtcattctcataatttcaccatagaattttcc 34362334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 31579099 - 31579256
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaa-----cactggggtgttacgtactcacaacactttc 97  Q
    |||||| ||| |||||||||||||||||||||||  |||| ||||||||||| ||||||| |||     || |||||||||||    |||  ||| |||     
T  31579099 agtcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcattgtataaattaaacagtggggtgttac----tcattacattttt 31579194  T
Q  98 gatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||  ||||||||||||||||||| |||| || |||| |||||||||||||| |||||||||    
T  31579195 gatgttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaattttcct 31579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 37347130 - 37346997
Alignment:
Q  21 aattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcacc 120  Q
    |||||||||||||||| ||||| ||||||||||| || |||||||||| ||||||||    ||||||  | | ||| |||  |||||| |||||||||||    
T  37347130 aattgatgatactatgaggactgaacttttgatgtcactgtacaaacaatggggtgt----tactcattatatttttgatggtatagtattaacttcacc 37347035  T
Q  121 agaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    | |||| |  || |||||||||||||||||||||||||    
T  37347034 aaaaaaatcattttcatgacttcaccataaaattttcc 37346997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 31520774 - 31520909
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||||| ||||| ||||||||||| || |||||||||| ||| ||||    ||||||| | | ||| |||  |||||| ||||||||    
T  31520774 atgaattgatgatactatg-ggactgaacttttgatgtcactgtacaaacaatggagtgt----tactcactatatttttgatggtatagtattaacttc 31520868  T
Q  118 accagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||| ||||||  || ||||||||||| |||||||||||||    
T  31520869 accaaaaaagtcattttcatgacttcatcataaaattttcc 31520909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 27421417 - 27421563
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||| |||| |||||| |||  ||||| ||||||||||| ||||||||||||| ||| |||||||    |||||||||||| |||  ||    
T  27421417 tcttgttaatctgataaatttatgatattata-ggactgaacttttgatgtcattgtacaaacagtggagtgttac----tcacaacacttttgatgtta 27421511  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    ||||||||||||||||| |||| |  || ||| |||||||||||| ||||||    
T  27421512 tagtgttaacttcaccaaaaaaatcattatcacgacttcaccatagaatttt 27421563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 37109998 - 37109847
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| |||   |||| ||||||||||| ||||||||||||  ||||||||    ||||||  ||| |||  ||      
T  37109998 agtcttgttaatctgatgaattgatgatattataatgactgaacttttgatgtcattgtacaaacggtggggtgt----tactcattacattttttatgt 37109903  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||||| ||||||  || | |||||||||||||| ||||||||    
T  37109902 tatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcc 37109847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 9355861 - 9356014
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||| | |||| |||| | ||| ||||||||||| || |||||||||| |||||| || |    |||| ||| |||  || |    
T  9355861 agtcttgttaatctgatgaattaacgataatatgagaactaaacttttgatgtcactgtacaaacagtggggtattgc----tcactacattttttatgc 9355956  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||||| ||||||| ||  ||  ||||||||||||||||||||||||||||||    
T  9355957 tatagtgttaaattcaccaaaatggtcattctcatgacttcaccataaaattttcctt 9356014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 17842621 - 17842774
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| |||   |||| | ||||||||| ||||||||||||  ||||||||    ||||||  ||| |||  ||      
T  17842621 agtcttgttaatctgatgaattgatgatattataatgactgagcttttgatgtcattgtacaaacggtggggtgt----tactcattacattttttatgt 17842716  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||||||||||||| ||||||  || | |||||||||||||| ||||||||||    
T  17842717 tatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcctt 17842774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 23111316 - 23111167
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||| ||||||||||||||||| |  |  | ||||||||||||||||||||||| | ||| |||||||    |||||| | ||| |||      
T  23111316 agtcttgttaatctaatgaattgatgatactacgatggttgaacttttgatgccattgtacaaatagtggtgtgttac----tcacaatatttttgatgt 23111221  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||||||||||||||| |  || |||||||||||||| | ||||||    
T  23111220 tatagtgttaacttcaccagaaaaatcattttcatgacttcaccacagaatttt 23111167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 48928334 - 48928466
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||| |||||||| ||||| ||||||||||| ||  ||||||| | |||||||     ||||||| ||||||| |||  ||    
T  48928334 tcttgttaatctgatgaattgataatactatg-ggactgaacttttgatggcaccgtacaaatagtggggtg----ctactcactacacttttgatgtta 48928428  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgactt 142  Q
    ||||||| ||||||||||||||||  ||||||||||||    
T  48928429 tagtgttgacttcaccagaaaagtcattctcatgactt 48928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 7334908 - 7334769
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    ||||||| |||||||||||||| | ||| ||||||||||| ||||||||||||| ||||||||    ||||||  |||  ||  ||  ||||||||||||    
T  7334908 ctgatgagttgatgatactatgagaactgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacatattttatgttatagtgttaac 7334813  T
Q  115 ttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||| || ||||||  |||||| ||||||||| || ||||||||    
T  7334812 ttcatcaaaaaagtcattctcacgacttcaccgtagaattttcc 7334769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 27283870 - 27283719
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||| ||||||| |||||||| ||||| ||||||||||  ||||||||||||  ||||||||    ||||||  ||| ||| |||      
T  27283870 agtcttgttaatctgataaattgataatactatgaggactgaacttttgatttcattgtacaaacggtggggtgt----tactcattacatttttgatgt 27283775  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||||| |||| |  || | || ||||||||||| ||||||||    
T  27283774 tatagtgttaacttcaccaaaaaaatcatttttataacttcaccatagaattttcc 27283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 38258672 - 38258594
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||| ||| ||||||||||||||||||||||| ||| | ||||||||||| ||||||||||||  || ||||||||    
T  38258672 cagtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgtcattgtacaaacggtgtggtgttac 38258594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 35353236 - 35353120
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggac-ttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgat 100  Q
    ||||||| ||| |||||||||||| |||||||||| ||||   |||||||||| |||| ||||||||| |||||||     ||||||| ||||||| |||    
T  35353236 cagtcttgttaatctgatgaattggtgatactatggggacagaaacttttgattccatcgtacaaacaatggggtg----ctactcactacacttttgat 35353141  T
Q  101 actatagtgttaacttcacca 121  Q
     |||||||||| |||||||||    
T  35353140 gctatagtgttgacttcacca 35353120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 8299250 - 8299192
Alignment:
Q  98 gatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||||| ||||||    
T  8299250 gatactatagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 8299192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 11071321 - 11071255
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||||||||| | ||| ||||||||||| || |||||||||| ||| |||||||    
T  11071321 tctgatgaattgatgatactatgagaactgaacttttgatgtcactgtacaaacagtggagtgttac 11071255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 10481731 - 10481660
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactgggg 74  Q
    |||||| ||| ||||||||||||||||||||||   |||| || |||||||| ||||||||||||| |||||    
T  10481731 agtcttgttaatctgatgaattgatgatactataaagactgaatttttgatgtcattgtacaaacagtgggg 10481660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 23402371 - 23402419
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||||||||||||  ||||||||||||| ||||| ||||||||    
T  23402371 ttaacttcaccagaaaagtcattctcatgacttcgccatagaattttcc 23402419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 10359261 - 10359400
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||||||||||||||  | ||| ||||||||||| || |||| ||| | | || ||||||    |||| ||||||| ||| |||||   ||||    
T  10359261 tctgatgaattgatgatactatcag-actgaacttttgatgtcactgtataaatagtaggatgttac----tcactacacttttgatgctataagattaa 10359355  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
     || |||||||||||  || |||||||||||||||| ||||||||    
T  10359356 ttttaccagaaaagtcattatcatgacttcaccatagaattttcc 10359400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 3953779 - 3953733
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||||||||||  |||||||||||||| |||| ||||||    
T  3953779 ttaacttcaccagaaaagtcattctcatgacttcatcatagaatttt 3953733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 4902388 - 4902334
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttta 164  Q
    |||| ||||||| |||| || || ||||||||||||||||||||||||| |||||    
T  4902388 ttaaattcaccaaaaaaattattttcatgacttcaccataaaattttccctttta 4902334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 34362149 - 34362195
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgt 61  Q
    |||||||||||||||||||||  | ||| ||||||||||||||||||    
T  34362149 ctgatgaattgatgatactataagaactgaacttttgatgccattgt 34362195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 40381988 - 40381938
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||||||||  ||||||| |||||||| || ||||||||||    
T  40381988 ttaacttcaccagaaaagtcattctcataacttcaccgtagaattttcctt 40381938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 43925208 - 43925167
Alignment:
Q  23 ttgatgatactatgtggacttaacttttgatgccattgtaca 64  Q
    ||||||||||||||| |||| ||||||||||| |||||||||    
T  43925208 ttgatgatactatgtagactgaacttttgatgtcattgtaca 43925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 44413427 - 44413491
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||| |||||||||  |||  ||||||||||  || |||||||||| |||||||||||    
T  44413427 tgatgaattgaagatactatggagaccgaacttttgatttcagtgtacaaacattggggtgttac 44413491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 5e-36; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 11466964 - 11466814
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    |||||||||||||| ||||  ||    
T  11466964 tcttgttaatctgatgaattgatgatactatggggactaaacttttgatgccactgtacaaacagtggggtgt----tactcacaacacttgcgatgtta 11466869  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||| ||||||||| |||||||||  |||||| |||||||||||| |||||||||    
T  11466868 tagtcttaacttcatcagaaaagtcattctcaagacttcaccatagaattttcct 11466814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 34133075 - 34132916
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |||||||    
T  34133075 tcttattagtctgatgaattgatgatattatggggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacatttttgatacta 34132980  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttttattaa 168  Q
    ||||||||| ||||||| ||||||  || || ||||||||  ||| ||||||||||||||||||    
T  34132979 tagtgttaatttcaccaaaaaagtcattttcgtgacttcattatagaattttcctttttattaa 34132916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 4015589 - 4015451
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||||| ||||||||||| || | |||||||| | |||||||||    |||||||||||| ||| ||||||||||||||    
T  4015589 tgatgaattgatgatactatgaggactgaacttttgatgtcactctacaaacagttgggtgttac----tcacaacacttttgatgctatagtgttaact 4015494  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||| |||||||||  ||||||||||||||||||| ||||||||    
T  4015493 tcatcagaaaagtcattctcatgacttcaccatagaattttcc 4015451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 35844466 - 35844314
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| || |||||||||| || ||||||||    |||||||| ||| | |  ||    
T  35844466 tcttgttaatctgatgaattgatgatactatggggactaaacttttgatgtcactgtacaaacagtgaggtgttac----tcacaacatttttgttgtta 35844371  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    ||||||||||||||||||||||||  || |||||||||||||||| |||||||||||    
T  35844370 tagtgttaacttcaccagaaaagtcattatcatgacttcaccatagaattttccttt 35844314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 45174645 - 45174494
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||| | |||||||||| ||  |||||||  ||  |||||||||| |||  ||    
T  45174645 tcttgttaatctgatgaattgatgatactatggggactgaacttttgatgctactgtacaaacagtgaagtgttactcac--acaacacttttgatgtta 45174548  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||| ||||||| ||||||  ||||||||||||||||||||    
T  45174547 tagtgttaacttcaccaaaaaagttattctcacaacttcaccataaaattttcc 45174494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 48355083 - 48354930
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| |||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||    ||||||  ||| |||  |||     
T  48355083 agtcttgttaatctgatgagttgatgatactatgagaactgaacttttgatgccattgtacaaacaatggggtgt----tactcattacatttttaatat 48354988  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||||||||||||| |||| |  ||||||||||||||||||| ||||||||||    
T  48354987 tatagtgttaacttcaccataaaaatcattctcatgacttcaccatagaattttcctt 48354930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 21193746 - 21193595
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||| ||||||| ||| ||||| ||||||||||| || | |||||||| |||||||||||    |||||||||||| ||| | |    
T  21193746 tcttgttaatctgatgaattaatgataccatggggactgaacttttgatgtcactctacaaacagtggggtgttac----tcacaacacttttgattcaa 21193651  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
     |||||||||||||||||||||||  |||||||||||| |||||| ||||||||||    
T  21193650 cagtgttaacttcaccagaaaagtcattctcatgactttaccatagaattttcctt 21193595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 22451111 - 22450957
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| | ||||||||||||||||||||| ||||| ||||||||||||||   |||||||| || ||||     ||||||| ||||||| |||     
T  22451111 cagtcttgttaatatgatgaattgatgatactatggggactgaacttttgatgccaccatacaaacagtgaggtg----ctactcactacacttttgatg 22451016  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||| |||||||||||||| |  ||||||||||||||||||| ||||||||||    
T  22451015 ctatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaattttcctt 22450957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 51213015 - 51213166
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||    | ||||  ||| |||  ||      
T  51213015 agtcttgttaatctgatgagttgatgatactatgaggactcaacttttgatgccattgtacaaacagtggggtgt----tgctcattacattttttatgt 51213110  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    || |||||||||||||||| ||||||  ||||||||||||||||||| ||||||||    
T  51213111 tacagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcc 51213166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 11357398 - 11357535
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacact-ggggtgttacgtactcacaacactttcgata 101  Q
    |||||| ||| |||||||||||||||||||||||  |||| |||||||||||| | |||||||||| | |||||||    ||||||| | ||||| |||     
T  11357398 agtcttgttaatctgatgaattgatgatactatgatgactgaacttttgatgcaactgtacaaacagtgggggtgt----tactcactatacttttgatg 11357493  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttc 143  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  11357494 ctatagtgttaacttcaccagaaaagtcattctcatgacttc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 40936131 - 40935995
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||| |||||||||||| ||||| ||||||||||| || |||| ||||| || ||||||||    || ||||||||| ||| |||    
T  40936131 tcttgttaatctgatgaatagatgatactatgaggactgaacttttgatgtcactgtataaacaatgaggtgttac----tcgcaacacttttgatgcta 40936036  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcac 145  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  40936035 tagtgttaacttcaccagaaaaatcattctcatgacttcac 40935995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 37203209 - 37203058
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||| ||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    ||||||| ||| ||| |||      
T  37203209 agtcttgttaatcttatgaattgatgatactatgaggactgaacttttgatgccactgtacaaacagtggggtgt----tactcactacaattttgatgt 37203114  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||||||||| || |||| |  || | |||||||||||||| ||||||||    
T  37203113 tatagtgttaacttcatcaaaaaaatcatttttatgacttcaccatagaattttcc 37203058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 44186548 - 44186687
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| ||||| ||||||||||| || |||| |||||  ||||||||||    |||||||||||| ||| ||||||||||||||    
T  44186548 tgatgaattgatgatactatggggactgaacttttgatgtcactgtataaacagcggggtgttac----tcacaacacttttgatgctatagtgttaact 44186643  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||| |||| |  |||||  ||||||| |||| |||||||||    
T  44186644 tcaccaaaaaaatcattctctcgacttcatcatagaattttcct 44186687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 46297811 - 46297945
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||| | ||||| ||||||||| ||||||||||||||| ||| ||||    ||||||| | | ||| |||  |||||||||||||||    
T  46297811 atgaattgatgatactacggggactgaacttttgacgccattgtacaaacagtggtgtgt----tactcactatatttttgatgttatagtgttaacttc 46297906  T
Q  118 accagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||  || |||||||||||||||| ||||||    
T  46297907 accagaaaagtcattttcatgacttcaccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 40552304 - 40552445
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||  ||| ||||    ||||||  ||| ||| |||  |||||||||||    
T  40552304 tctgatgaattgatgatattatgaggactgaacttttgatgtcattgtacaaacggtggagtgt----tactcattacatttttgatgttatagtgttaa 40552399  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||| ||| ||||||  ||||||||||||||||||| |||||||||    
T  40552400 cttctccaaaaaagtcattctcatgacttcaccatagaattttcct 40552445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 53229186 - 53229343
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactg-gggtgttacgtactcacaacactttcgata 101  Q
    |||||| ||| |||||||||||||||||| ||||  |||| |||||||||||| | |||||||||| || ||||||| |    |||| ||||||| |||     
T  53229186 agtcttgttaatctgatgaattgatgatattatgatgactgaacttttgatgcaactgtacaaacattgagggtgttgc----tcactacacttttgatg 53229281  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    |||||||||||| |||||||||||| |  || ||||||||||||| ||||||||| ||||||    
T  53229282 ctatagtgttaatttcaccagaaaaataattttcatgacttcaccttaaaatttttcttttt 53229343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 47481651 - 47481507
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||||| || || ||||||||||| |||| |||||||| ||||||||    ||||||  ||| ||| |||  |||||||||||||    
T  47481651 tgatgaattgatgatactatgagggctaaacttttgatgtcattctacaaacagtggggtgt----tactcattacatttttgatgttatagtgttaact 47481556  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttccttttta 164  Q
    |||||| |||  |  |||  |||||||||||||||||||||||||||||    
T  47481555 tcaccaaaaacatcattcctatgacttcaccataaaattttccttttta 47481507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 7327530 - 7327669
Alignment:
Q  17 gatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtg-ttaact 115  Q
    |||||||||||||||||||| ||||| ||||||||||| || |||||||| | ||| ||||    ||||||||||||||| |||  ||||||| ||||||    
T  7327530 gatgaattgatgatactatggggactgaacttttgatgtcactgtacaaataatggagtgt----tactcacaacacttttgatgttatagtgtttaact 7327625  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||| | ||||||  ||||||| ||||||||||| |||||||||    
T  7327626 tcactaaaaaagtcattctcataacttcaccatagaattttcct 7327669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 52040958 - 52041109
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacact-ggggtgttacgtactcacaacactttcgatact 103  Q
    |||| ||| |||||||||||||||||||||||  |||| |||||||||||||| | |||||||| | |||| |||||    |||| ||||||| |||  |    
T  52040958 tcttgttaatctgatgaattgatgatactatgatgactgaacttttgatgccactatacaaacatttggggagttac----tcactacacttttgatgtt 52041053  T
Q  104 atagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||| |||||||||||||||||||  ||||||||||||||||  | |||||||||    
T  52041054 atagtattaacttcaccagaaaagtcattctcatgacttcacctcagaattttcct 52041109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 3655238 - 3655388
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||  ||||||||    ||||||  ||| |||  ||  ||    
T  3655238 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacggtggggtgt----tactcattacattttttatgtta 3655333  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||| | || ||||||  || | ||||||||||||||||||||||||    
T  3655334 tagtgttaactttatcaaaaaagtcatttttatgacttcaccataaaattttcct 3655388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 26941294 - 26941446
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||| ||||||| ||| ||||| ||||||||||| |||| |||||||| ||||||||    ||||||  | | ||| |||      
T  26941294 agtcttgttaatctgatgaattaatgataccatgaggactgaacttttgatgtcattatacaaacagtggggtgt----tactcattataattttgattt 26941389  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||||||| |||| |  |||| |||||||||||||| |||||||||    
T  26941390 tatagtgttaacttcaccaaaaaaatcattcttatgacttcaccatagaattttcct 26941446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 29099484 - 29099356
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||||| | ||||| |||||| |||| || |||||||||| ||||||||    ||||||| ||| |||  ||  |||||||||||||    
T  29099484 tgatgaattgatgatactaaggggactgaactttagatgtcactgtacaaacagtggggtgt----tactcacgacattttttatgttatagtgttaact 29099389  T
Q  116 tcaccagaaaagttgttctcatgacttcaccat 148  Q
    |||||||||||||  |||| |||||||||||||    
T  29099388 tcaccagaaaagtcattctaatgacttcaccat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 33378818 - 33378973
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| |||||||||||||| |||||||| ||||| ||||||||||| ||  ||||||| | ||||||   || ||||||| ||||||| ||||    
T  33378818 cagtcttgttaatctgatgaattgataatactatggggactgaacttttgatgtcaccgtacaaatattggggt---ac-tactcactacacttttgata 33378913  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttta 164  Q
    |||||||||| |||||||   ||||||  ||||||| ||||  ||||| ||||||||||||||    
T  33378914 ctatagtgttgacttcac---aaaagtcattctcataactttgccatagaattttccttttta 33378973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 42506109 - 42506186
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||||| ||||    
T  42506109 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtattac 42506186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 2008073 - 2007964
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||| ||||| ||| | |||||||||||||| |||||||||| ||||||||    |||||||||||||||  |  |||    
T  2008073 tcttgttaatctgatgaattgatgatgctatggggattgaacttttgatgccactgtacaaacagtggggtgt----tactcacaacacttttaacgcta 2007978  T
Q  105 tagtgttaacttca 118  Q
    ||||||||||||||    
T  2007977 tagtgttaacttca 2007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 20373330 - 20373487
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | ||||||||||||||||| ||| | ||| ||||||||||| ||||||||||||| ||||||||    |||||   ||| ||| |||      
T  20373330 agtcttgttaatttgatgaattgatgataccatgagaactgaacttttgatgtcattgtacaaacagtggggtgt----tactcgttacatttttgatgt 20373425  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttta 164  Q
    |||||| |||||||||||| |||| |  |||| |||||||||| |||||||||||| |||||    
T  20373426 tatagtattaacttcaccaaaaaaatcattcttatgacttcactataaaattttccatttta 20373487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 37157849 - 37157699
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||| || ||||||||||||||||  |||| |||||||||||||| ||||| |||| ||||||||    ||||||| ||| ||| |||      
T  37157849 agtcttgttaatcttataaattgatgatactatgatgactgaacttttgatgccactgtac-aacagtggggtgt----tactcactacaattttgatgt 37157755  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||||||||| || |||||   || |||||||||||||||| ||||||||    
T  37157754 tatagtgttaacttcatcaaaaaagccattttcatgacttcaccatagaattttcc 37157699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 4761683 - 4761838
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| || ||||| |||||||||||||| ||||| ||||||||||| ||||||||||||| ||  ||||    ||||||  ||| ||| ||||     
T  4761683 agtcttgttaatcagatgagttgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgaagtgt----tactcattacatttttgatat 4761778  T
Q  103 tatagtgttaacttcacc--agaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||| |||||||||||  | ||||||   |||||||| ||||||||| ||||||||||    
T  4761779 tatagtattaacttcaccaaaaaaaagtcaatctcatgaattcaccatagaattttcctt 4761838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 43975933 - 43976068
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||| |||| ||| | ||||||||||| ||| ||||||| | ||| |||     ||||||| ||||||| ||| |||||||||| |    
T  43975933 tctgatgaattgatgatattatgaggattaaacttttgatgtcatcgtacaaatagtggagtg----ctactcactacacttttgatgctatagtgttga 43976028  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||   || ||||||  ||||||||||||||||||||||||||    
T  43976029 ctt---caaaaaagtcattctcatgacttcaccataaaatttt 43976068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 38591840 - 38591778
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaa 65  Q
    |||||| ||| |||||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  38591840 agtcttgttaatctgatgagttgataataatatgtggacttaacttttgatgccattgtacaa 38591778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 24488998 - 24489108
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| |||| ||||| ||||||||||| |||||| |||||| |||  |||    ||||||||||| |||  ||||||    
T  24488998 tcttgttagtctgatgaattgatgataatatggggactgaacttttgatgtcattgtgcaaacagtggaatgt----tactcacaacatttttaatacta 24489093  T
Q  105 tagtgttaacttcac 119  Q
    |||| ||||||||||    
T  24489094 tagtcttaacttcac 24489108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 25579803 - 25579731
Alignment:
Q  85 tcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    |||||||||||| ||| ||||||| ||||||||||||||||| |  ||||||| |||| ||||||||||||||    
T  25579803 tcacaacacttttgatgctatagtattaacttcaccagaaaaatcattctcataacttaaccataaaattttc 25579731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 39282794 - 39282642
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||| ||||||| |||| | ||| |||||||||||||| |||| ||||| |||||| |    ||||||| ||| ||| |||      
T  39282794 agtcttgttaatctgatgaatggatgataatatgagaactgaacttttgatgccactgtataaacagtggggtat----tactcac-acagttttgatgt 39282700  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||||| || | ||||||| |  || |||||||||||||||| ||||||||||    
T  39282699 tatagtgttaattttatcagaaaaatcattttcatgacttcaccatagaattttcctt 39282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 44891637 - 44891498
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||| |||||||||||||||||||||| ||||||||||||||         || |||| ||||||    |||||||||||| |||  ||    
T  44891637 tcttgttaatctgattaattgatgatactatgtggactaaacttttgatgcca---------cagtgggatgttac----tcacaacacttttgatgtta 44891551  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||| ||||||  || ||||||||||||| || ||||||||    
T  44891550 tagtgttaacttcacca-aaaagtcattttcatgacttcaccgtataattttcc 44891498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 53176194 - 53176131
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaaca 68  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||  ||||||||||||    
T  53176194 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgttattgtacaaaca 53176131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 32373571 - 32373460
Alignment:
Q  44 aacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttc 143  Q
    |||||||||||||| |||||||||| ||| ||      ||||||||||||||| ||| ||||||||||||||| |   |||||||  |||||||||||||    
T  32373571 aacttttgatgccactgtacaaacagtggagt------tactcacaacacttttgatgctatagtgttaactttattggaaaagtcattctcatgacttc 32373478  T
Q  144 accataaaattttccttt 161  Q
    | |||| ||||| |||||    
T  32373477 atcatagaatttcccttt 32373460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 40640634 - 40640684
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  40640634 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcctt 40640684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 55343409 - 55343472
Alignment:
Q  98 gatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    |||| |||||||||||||||| |||||||||  || || ||||||||||||| |||||||||||    
T  55343409 gatattatagtgttaacttcatcagaaaagtcattttcgtgacttcaccatagaattttccttt 55343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 27480412 - 27480478
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaaca 68  Q
    ||||||| ||| | ||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||    
T  27480412 cagtcttgttaatatgatgaattgatgatactatggggactgaacttttgatgtcaccgtacaaaca 27480478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 29163893 - 29163839
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    |||||||||||||||||||||||| |  || | ||||||||||||||||||||||    
T  29163893 tatagtgttaacttcaccagaaaaatcattttaatgacttcaccataaaattttc 29163839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 53818509 - 53818555
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  53818509 ttaacttcaccagaaaaatcattctcatgacttcaccataaaatttt 53818555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 3362382 - 3362276
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||||| ||| ||| | |||||||||||||| |||||||| | |||| |||    ||||||| | | ||  ||| ||||||||||||||    
T  3362382 tgatgaattgatgataccatgaggagtgaacttttgatgccactgtacaaatagtgggatgt----tactcactatatttctgatgctatagtgttaact 3362287  T
Q  116 tcaccagaaaa 126  Q
    |||||| ||||    
T  3362286 tcaccaaaaaa 3362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 11835737 - 11835790
Alignment:
Q  104 atagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    |||||||||||||||||| |||| |  ||||||||||||||||||| |||||||    
T  11835737 atagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttc 11835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 21009848 - 21009913
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||| |||| || || ||||||||||| |||| |||||| | |||||||||||    
T  21009848 ctgatgaattgatgataatatgagggctgaacttttgatgtcattctacaaatagtggggtgttac 21009913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 24708151 - 24708212
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtaca 64  Q
    |||||| ||| |||||||||||||||||||||||  |||| ||||||||||| || ||||||    
T  24708151 agtcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcactgtaca 24708212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 33698255 - 33698183
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||| ||| |||  ||||||||||||||||| ||| ||    ||||||||||||||||||| ||||||||    
T  33698255 tactcacaacatttttgatgttatagtgttaacttcactagagaa----ttctcatgacttcaccatagaattttcc 33698183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 38392628 - 38392678
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||| ||||||  ||||||||||||||||||| ||||| ||||    
T  38392628 ttaacttcaccaaaaaagtcattctcatgacttcaccatataatttccctt 38392678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 53175751 - 53175709
Alignment:
Q  121 agaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    ||||||||  ||||||| |||||||||||||||||||||||||    
T  53175751 agaaaagtcattctcataacttcaccataaaattttccttttt 53175709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 22446111 - 22446175
Alignment:
Q  16 tgatgaattgatgatactatgtggactt-aacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||||||| ||  || |||||||||||||| |||||||| | |||||||||||    
T  22446111 tgatgaattgatgatactatgagggtttgaacttttgatgccactgtacaaa-agtggggtgttac 22446175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 45879498 - 45879547
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||| |||||||||||  |||||||||||||| |||| |||||||||    
T  45879498 ttaactttaccagaaaagtcattctcatgacttcagcatagaattttcct 45879547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 54828830 - 54828883
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||||||| |||| |||| || || | |||||||||||||||||||||    
T  54828830 tatagtgttaactttaccaaaaaaattatttttatgacttcaccataaaatttt 54828883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 46994710 - 46994754
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgta 62  Q
    |||| |||||||||||||| ||||| ||||||||||| |||||||    
T  46994710 atgagttgatgatactatgaggactgaacttttgatgtcattgta 46994754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 47930666 - 47930714
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||| |  || |||||||||||||||| ||||||||    
T  47930666 ttaacttcaccagaaaaatcattttcatgacttcaccatagaattttcc 47930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 53811976 - 53812024
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||| |||||||||  |||||||||||||||| || ||||||||    
T  53811976 ttaacttcatcagaaaagtcattctcatgacttcaccgtagaattttcc 53812024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 8e-35; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 34948170 - 34948306
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    |||||||||||||||| |||| ||||| |||||||||||||| | |||||||| |||||||||||    |||||||||||| |||  |||||||||||||    
T  34948170 tgatgaattgatgatattatgaggactgaacttttgatgccactttacaaacagtggggtgttac----tcacaacacttttgatgttatagtgttaact 34948265  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    || ||||||||||  ||||||||||||||||||||||||||    
T  34948266 tcgccagaaaagtcattctcatgacttcaccataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 55241167 - 55241320
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| |||||| |||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    ||||| ||||| ||| |||| ||    
T  55241167 tcttctta-tctgataaattgatgatactatggggactgaacttttgatgccactgtacaaacagtggggtgt----tactcgcaacaattttgataata 55241261  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    |||| |||||||||| ||||||||  ||||||||||||||||||| |||||||| ||||    
T  55241262 tagtattaacttcactagaaaagtcattctcatgacttcaccatagaattttccatttt 55241320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 19089513 - 19089664
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||| |||||||||||    |||  ||| ||| ||||     
T  19089513 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattatacaaacagtggggtgttac----tcattacaattttgatat 19089608  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||||||||| || ||||||| |||| |||||||||||||| ||||||||    
T  19089609 tatagtgttaacttcatcaaaaaagttattcttatgacttcaccatagaattttcc 19089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 27396765 - 27396618
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||| | ||||||    |||||| ||||||||  || |||    
T  27396765 tcttgttaatctgatgaattgatgatactatgaggacgaaacttttgatgtcattgtacaaacagtagggtgt----tactcataacacttttaatgcta 27396670  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    || |||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  27396669 taatgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 27396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 29584271 - 29584414
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||||| || |||||||      | ||||||||| |||  |||||||||||    
T  29584271 tctgatgaattgatgatactatgaagactgaacttttgatgccattgtacaaacagtgaggtgtta------ctcaacacttttgatgttatagtgttaa 29584364  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    |||||||||||||||  ||| || |||||||||||| |||||||||||||    
T  29584365 cttcaccagaaaagtcattcccacgacttcaccatagaattttccttttt 29584414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 157
Target Start/End: Complemental strand, 4598130 - 4597994
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaact 115  Q
    ||||||||||||||  ||| | ||||| |||||||||||||| |||||||||| |||||||||||    |||||||||||| |||  |||||||||||||    
T  4598130 tgatgaattgatgagtctaaggggactgaacttttgatgccactgtacaaacagtggggtgttac----tcacaacacttt-gatgttatagtgttaact 4598036  T
Q  116 tcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    |||||||||||||  |||| ||||||||||||||||||||||    
T  4598035 tcaccagaaaagtcattctaatgacttcaccataaaattttc 4597994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 25701128 - 25701271
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||||||||||||||| ||||| ||||||||||| || |||||||||| | ||||||    ||||||| ||||||| |||  |||| ||||||    
T  25701128 tctgatgaattgatgatactatgaggactgaacttttgatgtcactgtacaaacagtagggtgt----tactcactacacttttgatgttataatgttaa 25701223  T
Q  114 cttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    ||| |||| ||||||  || ||||||||||||||||||||||||||||    
T  25701224 ctttaccaaaaaagtcattatcatgacttcaccataaaattttccttt 25701271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 49376116 - 49375966
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||  |||| |||||||||||||| ||||||| || ||||||||    ||||||| ||||||| ||| |||    
T  49376116 tcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgccactgtacaagcagtggggtgt----tactcacgacacttttgatgcta 49376021  T
Q  105 tagtgttaacttcaccag-aaaagttgttctcatgacttcaccataaaattttcc 158  Q
    || ||||||||||||||| ||||||  |||||||||||||||| || ||||||||    
T  49376020 taatgttaacttcaccagaaaaagtcattctcatgacttcaccgtagaattttcc 49375966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 28003045 - 28003197
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| || ||||||||||||||||||||  |||| ||||||||||| || |||||||||| ||| ||   || |||| || ||||||| |||     
T  28003045 cagtcttgttaatccgatgaattgatgatactatgatgactgaacttttgatgtcactgtacaaacagtggagt---ac-tactgactacacttttgatg 28003140  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||    
T  28003141 ctatagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 28003197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 38012005 - 38011848
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||| ||| |||| ||||| ||||||||||| ||  ||||||||| ||||||| ||     |||| ||||||| |||      
T  38012005 agtcttgttaatctgatgaattgataatattatggggactgaacttttgatggcaccgtacaaacagtggggtgctat----tcactacacttttgatgt 38011910  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttta 164  Q
    ||||||||| ||||||||||||||||  ||||||||| ||||||||| ||||||||||||||    
T  38011909 tatagtgttgacttcaccagaaaagtcattctcatgatttcaccatagaattttccttttta 38011848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 17167862 - 17167715
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| ||||||||||| |||||||||||  || | ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |||| ||    
T  17167862 tcttcttagtctgatgaattaatgatactatggagaatgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacatttttgatatta 17167767  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    || ||||||||||| |||||||||  || || | ||||||||||| ||||||    
T  17167766 taatgttaacttcatcagaaaagtcattttcgtaacttcaccatagaatttt 17167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 17173439 - 17173292
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||||||| ||||||||||| |||||||||||  || | ||||||||||| ||||||||||||| ||||||||    ||||||||||| ||| |||| ||    
T  17173439 tcttcttagtctgatgaattaatgatactatggagattgaacttttgatgtcattgtacaaacagtggggtgt----tactcacaacatttttgatatta 17173344  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    || ||||||||||| |||||||||  || || | ||||||||||| ||||||    
T  17173343 taatgttaacttcatcagaaaagtcattttcgtaacttcaccatagaatttt 17173292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 7703647 - 7703517
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||||| ||||| ||||||||||| ||  ||||||||| |||||||||||    | |||||||||| |||  |||||||||||||||||||||    
T  7703647 tgatgatactatggggactgaacttttgatgtcaccgtacaaacagtggggtgttac----tgacaacacttttgatgttatagtgttaacttcaccaga 7703552  T
Q  124 aaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||  |||||||||||| | |||| ||||||||    
T  7703551 aaagtcattctcatgactttaacatagaattttcc 7703517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 36493763 - 36493897
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||||| ||||| ||||||||||| || |||||||||| ||||||||    ||||||| | | ||| |||  |||||| ||||||||    
T  36493763 atgaattgatgatactatggggactgaacttttgatgtcactgtacaaacaatggggtgt----tactcactatatttttgatggtatagtattaacttc 36493858  T
Q  118 accagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||| ||||||| || |||||||||||||||| ||||||    
T  36493859 accaaaaaagttattttcatgacttcaccatagaatttt 36493897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 879608 - 879760
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||||||||  || | ||||||||||| ||||||||||||| || |||||    ||||||  ||| ||| |||      
T  879608 agtcttgttaatctgatgagttgatgatactatgaagattaaacttttgatgtcattgtacaaacaatgaggtgt----tactcattacatttttgatgt 879703  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||| ||||||||| |||| || |||||||||||||||| ||||||||||||    
T  879704 tatagtgtttacttcaccaaaaaaattattctcatgacttcaccttaaaattttcct 879760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 47253878 - 47253751
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||||| ||||| ||||||||||| || |||| ||||| | ||||||    ||||||||||||||| |||  ||||||||||||||||||| |    
T  47253878 tgatgatactatgaggactgaacttttgatgtcactgtataaacaat-gggtgt----tactcacaacacttttgatgatatagtgttaacttcaccaaa 47253784  T
Q  124 aaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||  ||||||||||||||||||| ||||||    
T  47253783 aaagtcattctcatgacttcaccatagaatttt 47253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 35021110 - 35021249
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||| | ||||  ||||||||| |||| |||||||||| ||| |||||||    |||| ||| ||| |||  |||| ||||||||||    
T  35021110 atgaattgatgatactacgaggacgaaacttttgacgccaatgtacaaacagtggtgtgttac----tcactacatttttgatgttataatgttaacttc 35021205  T
Q  118 accagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    |||||||||||  || |||||||||||||||| |||||||||||    
T  35021206 accagaaaagtcattttcatgacttcaccatagaattttccttt 35021249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 32592242 - 32592096
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||||| ||||||||||| || | |||||||| ||| ||||    ||||| ||||||||| ||||||     
T  32592242 tcttgttaatctgatgaattgatgatactaaggggactgaacttttgatgtcactatacaaacagtggagtgt----tactctcaacacttttgatactg 32592147  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattt 155  Q
    |||||||||||||| || ||||||  || | |||||||||| |||||||||    
T  32592146 tagtgttaacttcatcaaaaaagtcattataatgacttcacaataaaattt 32592096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 37663801 - 37663878
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||    
T  37663801 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttac 37663878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 39398051 - 39397918
Alignment:
Q  21 aattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcacc 120  Q
    |||||||||||||  |  |||| ||||||||||| || |||||||||| |||||||||||    ||||||||||||  ||  ||||||||||||||||||    
T  39398051 aattgatgatactgagaagactgaacttttgatgtcactgtacaaacaatggggtgttac----tcacaacacttttaatgttatagtgttaacttcacc 39397956  T
Q  121 agaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    | ||||||  |||| |||||||||||||| ||||||||    
T  39397955 ataaaagtcattctaatgacttcaccatagaattttcc 39397918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 54499311 - 54499420
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccatt-gtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    ||||||||||||||||||||   |||| ||||||||||| |||| ||||||||  |||||||||||    |||||||||||| ||| |||||||||||||    
T  54499311 tgatgaattgatgatactatagagactgaacttttgatgtcattagtacaaacggtggggtgttac----tcacaacacttttgatgctatagtgttaac 54499406  T
Q  115 ttcaccagaaaagt 128  Q
    ||||||||||||||    
T  54499407 ttcaccagaaaagt 54499420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 19440708 - 19440860
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||  ||| ||||    || |||  ||| ||| |||      
T  19440708 agtcttgttaatctgatgaattgatgatattatgaggactgaacttttgatgccattgtacaaacggtggagtgt----taatcattacatttttgatgt 19440803  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgac-ttcaccataaaattttcc 158  Q
    |||||||||||| |||||| ||||||  |||||||||| ||||||||| ||||||||    
T  19440804 tatagtgttaacatcaccaaaaaagtcattctcatgactttcaccatagaattttcc 19440860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 23761221 - 23761089
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||||||||||| || | |||||||| || |||||    ||||||||||||||| |||  ||    
T  23761221 tcttgttaatctgatgaattgatgatactatggggactgaacttttgatgtcactatacaaacagtgaggtgt----tactcacaacacttttgatgtta 23761126  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgact 141  Q
    |||||||||||| || |||| |||  |||||||||||    
T  23761125 tagtgttaactttacaagaatagtcattctcatgact 23761089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 55477951 - 55478108
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgt----acaaacactggggtgttacgtactcacaacactttcg 98  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||    ||||||| ||| ||||    |||||   ||| ||| |    
T  55477951 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacaaacagtggagtgt----tactcgttacatttttg 55478046  T
Q  99 atactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||  ||||||||||||||||||| |||| |  ||||||||||||||||||| ||||||||||    
T  55478047 atgttatagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcctt 55478108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 4205221 - 4205106
Alignment:
Q  49 ttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccat 148  Q
    |||||| ||||||||||||| ||||||||||     ||| |||| ||| |||| |||||||||||||||| |||||||||  || || ||||||||||||    
T  4205221 ttgatgtcattgtacaaacagtggggtgttat----tcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccat 4205126  T
Q  149 aaaattttcctttttattaa 168  Q
    | ||||||||||||||||||    
T  4205125 agaattttcctttttattaa 4205106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 50764879 - 50764732
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||| ||||||||||||||||||| ||| | ||||||||||| ||  ||||||||| ||||||||    ||||||||||||||| |||        
T  50764879 tcttgttaatctaatgaattgatgatactatgaggattgaacttttgatgtcaccgtacaaacagtggggtgt----tactcacaacacttttgat--gt 50764786  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    |||||||||||||| || ||||||| ||||||||||||   ||||||||||||||||    
T  50764785 tagtgttaacttcatcaaaaaagttattctcatgactt---cataaaattttccttt 50764732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 37287862 - 37287732
Alignment:
Q  26 atgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcacc-agaa 124  Q
    |||||| |||| ||| | |||||||||||||| |||||||||| ||||||||    ||||||||||||||| |||  |||||||||||||| ||| | ||    
T  37287862 atgatattatgaggattgaacttttgatgccactgtacaaacagtggggtgt----tactcacaacacttttgatgttatagtgttaactttaccaaaaa 37287767  T
Q  125 aagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||  ||||||| ||||||||||| |||||||||    
T  37287766 aagtcattctcattacttcaccatagaattttcct 37287732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 30002705 - 30002838
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||| |  |||| ||||||||||| || |||||||||| || ||||||||    |||||||||||| ||| ||| ||||||||||||||||||    
T  30002705 tgatgatactaagaagactgaacttttgatgtcactgtacaaacagtgaggtgttac----tcacaacacttttgatgctacagtgttaacttcaccaga 30002800  T
Q  124 aaagttgttctcatgacttcaccataaaattttccttt 161  Q
    ||| |  || | |||||||||||||| | |||||||||    
T  30002801 aaaatcattttaatgacttcaccatagagttttccttt 30002838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 33341547 - 33341397
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaa-cactttcgatact 103  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||| | |    |||| || ||| |||  |    
T  33341547 tcttgttaatctgatgaattgatgatactatg-ggactgaacttttgatgccactgtacaaacagtggggtgtt-cctcgcaacaatcaattttgatgat 33341450  T
Q  104 atagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||||||||| |||||||||||| |  ||||||||||||||| ||| ||||||    
T  33341449 atagtgttaatttcaccagaaaaatcattctcatgacttcactatagaatttt 33341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 25184264 - 25184112
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| ||||||||||||||  || | |||||| |||| ||||||||||||| | | |||||||    |||  ||| ||| |||      
T  25184264 agtcttgttaatctgatgagttgatgatactatgaagattgaactttggatgtcattgtacaaacagtagagtgttac----tcattacatttttgatgt 25184169  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||||||| || |||  ||||||||||||||||||| |||||||||    
T  25184168 tatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcct 25184112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 34361566 - 34361704
Alignment:
Q  17 gatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaactt 116  Q
    ||||||||||||||| |||| || || ||||||| ||| |||| |||||||| |||||||||||    |||  ||| |||  ||  ||||||||||||||    
T  34361566 gatgaattgatgatattatgagg-ctgaacttttaatgtcattctacaaacagtggggtgttac----tcattacattttttatgttatagtgttaactt 34361660  T
Q  117 caccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||| ||||||  |||| |||||||||||||| ||||||||||    
T  34361661 caccaaaaaagtcattcttatgacttcaccatagaattttcctt 34361704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 35025669 - 35025800
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||| | ||||| ||||||||||| ||  ||| ||||| |||||||     ||||||| ||||||| ||| |||||||||| |||||||||||    
T  35025669 tgatgatactacgaggactgaacttttgatgtcaacgtataaacagtggggtg----ctactcactacacttttgatgctatagtgttgacttcaccaga 35025764  T
Q  124 aaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||| |  || ||||||||||| |||| |||||||||    
T  35025765 aaaatcattttcatgacttcagcatagaattttcct 35025800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 52516652 - 52516599
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  52516652 tatagtgttaacttcaccataaaagtcattctcatgacttcaccataaaatttt 52516599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 15 - 160
Target Start/End: Original strand, 32912652 - 32912793
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    ||||| ||||||||||| |||| |  || ||||||||||  |||| |||||| ||| |||||||||    |||  ||| ||| |||  ||||||||||||    
T  32912652 ctgataaattgatgatattatgagtgctgaacttttgatatcattctacaaatactagggtgttac----tcattacatttttgatgttatagtgttaac 32912747  T
Q  115 ttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||| ||||||  |||| |||||||||||||| ||||||||||    
T  32912748 ttcaccaaaaaagtcattcttatgacttcaccatagaattttcctt 32912793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 37775816 - 37775670
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||    |||||||||||||| |||||||||| ||||||||    ||||||||||| |||  ||| ||    
T  37775816 tcttgttaatctgatgaattgatgatactaagggggg--aacttttgatgccactgtacaaacagtggggtgt----tactcacaacatttttaatatta 37775723  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    ||||| ||||||||||| |||| |  || | ||||||||||| || |||||||    
T  37775722 tagtgctaacttcaccaaaaaaatcattttaatgacttcaccgtagaattttc 37775670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 4934262 - 4934333
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactgggg 74  Q
    |||||| ||| ||||||||| ||||||||||||| ||| | |||||||||||||| |||||||||| |||||    
T  4934262 agtcttgttaatctgatgaaatgatgatactatgaggattgaacttttgatgccagtgtacaaacaatgggg 4934333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 2704560 - 2704510
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||||||||  || |||||||||||||||||||||||||||    
T  2704560 ttaacttcaccagaaaagtcattttcatgacttcaccataaaattttcctt 2704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 38812260 - 38812310
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcctt 38812310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 5048024 - 5048162
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||| ||||||||||||||||||| | ||| ||||||||||  ||| ||||||||| || |||    | ||||||| ||||||| |||     
T  5048024 cagtcttgttaatctcatgaattgatgatactatgggaactgaacttttgatatcatcgtacaaacagtgtggt----cctactcactacacttttgatg 5048119  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttca 144  Q
     ||||| ||| |||||||||||||| |  ||||||| ||||||    
T  5048120 ttatagagttgacttcaccagaaaaatcattctcataacttca 5048162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 17272066 - 17272009
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||||||||||||||||||||  ||| || |||||||||||| ||||||||||    
T  17272066 tatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaattttcctt 17272009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20097485 - 20097537
Alignment:
Q  104 atagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  20097485 atagggttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 6864186 - 6864123
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaa 66  Q
    |||||| ||| |||||| |||||||||||||||| |||||  ||||||||||| ||||||||||    
T  6864186 agtcttgttaatctgataaattgatgatactatgaggactggacttttgatgctattgtacaaa 6864123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 32579520 - 32579441
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    |||||||  |||||| |||  |||| |||| ||||||||||||||||  ||||||  |||||||||||||||||||||||    
T  32579520 tactcactgcacttttgatgttataatgttgacttcaccagaaaagtcattctcagaacttcaccataaaattttccttt 32579441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 42199880 - 42199728
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| || || ||||||| ||| |||| |||||| | |||||| |    ||||||  ||| ||| |||      
T  42199880 agtcttgttaatctgatgaattgatgatactatgagggctgaactttttatgtcattctacaaataatggggtat----tactcattacatttttgatgt 42199785  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||| |||||||||||| |||| |  |||| |||| ||||||||| | |||||||    
T  42199784 tatagtattaacttcaccaaaaaaatcattcttatgatttcaccatagatttttcct 42199728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 9139396 - 9139245
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| |||||||||||||| ||| | ||||||| ||| || |||||||||  |||||||||||  |||      | |||  || |    
T  9139396 agtcttgttaatctgatgagttgatgatactatggggattgaactttttatgtcactgtacaaacggtggggtgttactcact------attttttatgc 9139303  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||  ||||||||||||| ||||||   | |||||||||||||||| ||||||||||    
T  9139302 tataacgttaacttcaccaaaaaagtcaatttcatgacttcaccatagaattttcctt 9139245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 33816595 - 33816742
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||| ||||||||||||||||  |||| ||||||||||||||  ||| ||| | || ||||     ||||||| ||||||| ||| |||    
T  33816595 tcttgttaatctgataaattgatgatactatggagactgaacttttgatgccaccgtataaatagtgaggtg----ctactcactacacttttgatgcta 33816690  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
     | |||| |||||||||||||| |  |||||||||||| | |||| ||||||    
T  33816691 caatgttgacttcaccagaaaaatcattctcatgacttaagcatataatttt 33816742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 46888228 - 46888354
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaa 113  Q
    ||||||||||| | |||| |||| ||||| |||||||||||||  |||||||| | |||||| |    ||||||| ||| ||| |||  |||||| ||||    
T  46888228 tctgatgaattaacgatagtatggggactgaacttttgatgccgctgtacaaatagtggggtat----tactcactacaattttgatgttatagtattaa 46888323  T
Q  114 cttcaccagaaaagttgttctcatgacttca 144  Q
    ||||| |||||||||| || || ||||||||    
T  46888324 cttcatcagaaaagttattttcttgacttca 46888354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 38811861 - 38811813
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  38811861 ttaacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 38811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 131 - 161
Target Start/End: Complemental strand, 1012336 - 1012306
Alignment:
Q  131 ttctcatgacttcaccataaaattttccttt 161  Q
    |||||||||||||||||||||||||||||||    
T  1012336 ttctcatgacttcaccataaaattttccttt 1012306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 7152241 - 7152319
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||| | ||||| |||  |||| ||||||||| |||||||||||  ||  ||||||||||||||| ||||||||||    
T  7152241 tactcactatacttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccatagaattttcctt 7152319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 37663897 - 37663951
Alignment:
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||||| || ||||||  |||| |||||||||||||| |||||||||    
T  37663897 tagtgttaacttcatcaaaaaagtcattcttatgacttcaccatagaattttcct 37663951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 47073656 - 47073710
Alignment:
Q  109 gttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    ||||||||||||| ||||||  || ||||||||| |||||| |||||||||||||    
T  47073656 gttaacttcaccaaaaaagtcattatcatgactttaccatagaattttccttttt 47073710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 50697392 - 50697316
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| ||||||||||||||||||||| | | | | ||||||||||| ||||||||||||  | |||||||||    
T  50697392 agtcttgttaatctgatgaattgatgatacta-gagaattgaacttttgatgtcattgtacaaacggtagggtgttac 50697316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 51204633 - 51204580
Alignment:
Q  104 atagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    |||| ||||||||||||||||||||  || | |||||||||||||| |||||||    
T  51204633 atagggttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 51204580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 3042666 - 3042606
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    ||||||||||||||||||| |||| |  || | |||| ||||||||| |||||||||||||    
T  3042666 tatagtgttaacttcaccaaaaaaatcatttttatgatttcaccatagaattttccttttt 3042606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 6864090 - 6864038
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattt 155  Q
    ||||||| ||||||||||| ||||||  |||||||||| |||||||| |||||    
T  6864090 tatagtgataacttcaccaaaaaagtcattctcatgacatcaccatacaattt 6864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 11742394 - 11742535
Alignment:
Q  17 gatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaactt 116  Q
    ||||||||||||||| |||| ||||| ||||||||||| || |||||||||| ||||||||||| |||    |||||||| |||| ||||||||||||||    
T  11742394 gatgaattgatgatattatg-ggactgaacttttgatgtcactgtacaaacagtggggtgttacttac----aacacttttgataatatagtgttaactt 11742488  T
Q  117 caccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    ||||||||||||  ||||||| ||||||| |||||||||||||||||    
T  11742489 caccagaaaagtcattctcataacttcacgataaaattttccttttt 11742535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 47279334 - 47279191
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||| ||||||||    ||||||||||||||| |||| ||    
T  47279334 tcttgttaatctgatgaattgatgatactatgaggactgaactttcgatgccactgtacaaacagtggggtgt----tactcacaacacttttgatagta 47279239  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaa 152  Q
    || |||||||||||||| |||| |  ||||||||||||||||| ||||    
T  47279238 taatgttaacttcaccaaaaaaatcattctcatgacttcaccaaaaaa 47279191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 15752176 - 15752027
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||    ||||||| | | |||  ||      
T  15752176 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgccattgtacaaacagtgaggtgt----tactcactatattttttatgt 15752081  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||| ||||||    
T  15752080 tatagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 15752027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 38823359 - 38823210
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||| | ||||||||||| || |||||||| | |||||||||||    || ||||| ||| ||| |||    
T  38823359 tcttgttaatctgatgaattgatgatactatggggattgaacttttgatgacactgtacaaatagtggggtgttac----tcgcaacaattttgatgcta 38823264  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||||| |||||||||||  ||||||||||||||||||| ||||||||    
T  38823263 tagtgttaacttaaccagaaaagtcattctcatgacttcaccatagaattttcc 38823210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 16415793 - 16415639
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactg-gggtgttacgtactcacaacactttcgata 101  Q
    |||||| ||| ||| |||||||||||||||||||  | || |||||||||||||| |||||||||| |  |||||||||    |||| ||||||| |||     
T  16415793 agtcttgttaatctaatgaattgatgatactatgatggctgaacttttgatgccactgtacaaacatttagggtgttac----tcactacacttttgatg 16415698  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    |||||||||||||||||||||||||||  |||||||||||||||| || ||||||||||    
T  16415697 ctatagtgttaacttcaccagaaaagtcattctcatgacttcaccttagaattttcctt 16415639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 7079105 - 7079254
Alignment:
Q  16 tgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacg-------tactcacaacactttcgatactatagt 108  Q
    |||||||||||||||||||||  |||| ||||||||||| ||||||||||||| || |||||||         ||||||||||||||| |||| ||||||    
T  7079105 tgatgaattgatgatactatgatgactgaacttttgatgtcattgtacaaacagtgaggtgttagtggggtgttactcacaacacttttgatattatagt 7079204  T
Q  109 gttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||| ||||||  || ||||||||| |||||||||||||||    
T  7079205 gttaacttcaccaaaaaagtcattatcatgactttaccataaaattttcc 7079254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 2959894 - 2959743
Alignment:
Q  4 gtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatact 103  Q
    ||||| ||| |||||||||||||||| |||||| ||||| ||||||||||| || |||||||||| |||| |||||| ||||    ||| ||| |||  |    
T  2959894 gtcttgttaatctgatgaattgatgacactatgaggactgaacttttgatgtcactgtacaaacagtgggatgttacttact----acagttttgatgtt 2959799  T
Q  104 atagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||| |||||||||  || |||||||||||||||| |||||||||    
T  2959798 atagtgttaacttcatcagaaaagtcattttcatgacttcaccatagaattttcct 2959743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 48620782 - 48620627
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||| | ||||| ||||||||||| || |||||||||| ||||||||    ||||||||||||||| |||  ||    
T  48620782 tcttgttaatctgatgaattgatgatactaaggggactgaacttttgatgtcactgtacaaacagtggggtgt----tactcacaacacttttgatgtta 48620687  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttta 164  Q
    || |||||||||||| ||||||||  || | || |||||| |||| ||||||||||||||    
T  48620686 tattgttaacttcacaagaaaagtcattttaataacttcaacatagaattttccttttta 48620627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 1547413 - 1547279
Alignment:
Q  24 tgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttcaccaga 123  Q
    ||||||||||||| | ||| |||||||||||||| || ||||||| ||| |||||||    |||||||| |||  ||  |||||||||||||||||||||    
T  1547413 tgatgatactatgagaactgaacttttgatgccactgcacaaacagtggagtgttac----tcacaacattttttatgttatagtgttaacttcaccaga 1547318  T
Q  124 aaagttgttctcatgacttcaccataaaattttcctttt 162  Q
    |||||  ||||||||||||||||||| ||||||||||||    
T  1547317 aaagtcattctcatgacttcaccatagaattttcctttt 1547279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 3309292 - 3309139
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||||||||  || | |||||||||| ||| |||||||||| | ||||||    ||||||||||||||| |||  ||    
T  3309292 tcttgttaatctgatgaattgatgatactatgaagattgaacttttgataccactgtacaaacagt-gggtgt----tactcacaacacttttgatgtta 3309198  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    |||||||||||| |||||||||||  |||||||||||| |||||| |||||||| ||||    
T  3309197 tagtgttaactttaccagaaaagtcattctcatgactttaccatagaattttccatttt 3309139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 39393528 - 39393376
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||| ||||||||||| ||| | |||||||||||||| |||||||||| ||  || ||||    |||||||||||| ||| |||    
T  39393528 tcttgttaatctgatgaatttatgatactatggggattaaacttttgatgccactgtacaaacaatgaagtattac----tcacaacacttttgatgcta 39393433  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    ||||||||||||||  ||||||||  ||||||| |||||||| || |||||||||||    
T  39393432 tagtgttaacttcattagaaaagtcattctcataacttcaccgtagaattttccttt 39393376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 238544 - 238702
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||| ||||| |||||||||| ||||| ||||||||||| ||||||||||||| |||  ||||||    |||||||| |||  ||||||    
T  238544 tcttgttagtctgattaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtgga-tgttac----tcacaacatttttaatacta 238638  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttttattaa 168  Q
    ||||||||||||||||| ||||||| || || ||||||||| ||| |||||| |||| ||||||    
T  238639 tagtgttaacttcaccaaaaaagttattttcgtgacttcactatagaatttttctttatattaa 238702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 14758189 - 14758038
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||| |||||||||||| |||||| ||||| ||||||||||||||  ||||||||| | | ||| |||    |||| ||||||| |||     
T  14758189 cagtcttgttaatctaatgaattgatgaaactatggggactgaacttttgatgccaccgtacaaacagttgtgtgctac----tcactacacttttgatg 14758094  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
     ||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||    
T  14758093 ttatagtgttgacttcaccagaaaagtcattctcatgacttcaccgtaaaattttc 14758038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 27533011 - 27533144
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||||||||||||| ||| | |||||||||||||| |||||||| | |||| ||||||     ||||| ||||| ||| |||    
T  27533011 tcttgttaatctgatgaattgatgatactatggggattgaacttttgatgccactgtacaaagagtgggttgttacc----cacaatacttttgatgcta 27533106  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgactt 142  Q
    ||||||||||||||||||||||||  ||||||| ||||    
T  27533107 tagtgttaacttcaccagaaaagtcattctcataactt 27533144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 10922874 - 10922724
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||| |||||||||||||| ||| | ||||||||||| ||||||||||||| ||||||    | ||||||  ||| |||  ||      
T  10922874 agtcttgttaatctgatgagttgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggggt----cttactcattacattttttatgt 10922779  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttc 157  Q
    ||||||||||||||||||| |||| |  ||||||||| |||||||||||||||||    
T  10922778 tatagtgttaacttcaccaaaaaaatcattctcatgatttcaccataaaattttc 10922724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 47682523 - 47682673
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggg-gtgttacgtactcacaacactttcgata 101  Q
    |||||| ||| ||||||||||||||||||||||| ||| | |||||||||| ||| ||||||| || |||| |||||||    |||||||| |||  ||     
T  47682523 agtcttgttaatctgatgaattgatgatactatgaggaatgaacttttgataccactgtacaagcagtgggagtgttac----tcacaacattttttatg 47682618  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||  ||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  47682619 cta--gtgttaacttcaccaaaaaagtcactctcatgacttcaccataaaattttcc 47682673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 32267179 - 32267027
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||  ||||||||| |||| ||| | ||||||||||| ||||||||||||| ||||||||    ||||||  ||| ||| |||  ||    
T  32267179 tcttgttaatctgatgggttgatgataatatgaggagtgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacatttttgatgtta 32267084  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    || |||||||||||| | ||||||  |||| ||||||||||||||||||||||||||    
T  32267083 tattgttaacttcacaaaaaaagtcattcttatgacttcaccataaaattttccttt 32267027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 10182039 - 10182189
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||| ||| ||||||||    ||| | | |||  ||  ||    
T  10182039 tcttgttaatctgatgaattgacgatactatgaggactgaacttttgatgccactgtacaaacagtggcgtgttacg----cactatattttttatgtta 10182134  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
     ||| |||||||||||| ||||||  || |||||||||||||||| |||||||||    
T  10182135 cagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcct 10182189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 18422796 - 18422646
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||  ||||||||    |||||   | | ||| |||  ||    
T  18422796 tcttgttaatctgatgaattgatgatattatgaggactgaacttttgatgtcattgtacaaacggtggggtgt----tactcgttatatttttgatgtta 18422701  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||||| ||||||  || | |||||||||||||| |||||||||    
T  18422700 tagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcct 18422646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 37618932 - 37619081
Alignment:
Q  14 tctgatgaattgatgata--ctatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgtt 111  Q
    ||||||||||||||||||  ||||| | ||| ||||||||||| |||| |||||||| |||||||||   ||||||  | | ||| |||  |||||||||    
T  37618932 tctgatgaattgatgatatactatgagaactgaacttttgatgtcattttacaaacagtggggtgttt--tactcattaaatttttgatgttatagtgtt 37619029  T
Q  112 aacttcaccagaaaagttgttctcatgacttcaccataaaattttccttttt 163  Q
    |||||||||| ||||||  |||| || ||||||||||| |||||||||||||    
T  37619030 aacttcaccaaaaaagtcattcttataacttcaccatagaattttccttttt 37619081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 15168244 - 15168082
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgc-------cattgtacaaacactggggtgttacgtactcacaacact 94  Q
    ||||||| ||| ||||||||||||||||||||||| ||||| ||||||||||||       ||  ||||||||| |||||||     ||||||| |||||    
T  15168244 cagtcttgttaatctgatgaattgatgatactatggggactgaacttttgatgccaccgtacaacgtacaaacagtggggtg----ctactcactacact 15168149  T
Q  95 ttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    || ||| |||||||||| ||||||||||||||    ||||||| ||||||| ||| |||||||||||    
T  15168148 tttgatgctatagtgttgacttcaccagaaaaagcattctcatcacttcacgatagaattttccttt 15168082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 31621581 - 31621733
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgata 101  Q
    ||||||| ||| ||||||||||||||||||||||| ||||| || |||||||||||  ||||||| |  ||||||     ||||||  |||| || |||     
T  31621581 cagtcttgttaatctgatgaattgatgatactatggggactgaatttttgatgccaccgtacaaatagcggggtg----ctactcaatacacctttgatg 31621676  T
Q  102 ctatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
     ||||||||| ||||||| ||||||||  |||||||||||||||| || ||||||||    
T  31621677 ttatagtgttgacttcactagaaaagtcattctcatgacttcaccgtagaattttcc 31621733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 34012408 - 34012560
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||||||| ||||  |||| |||||||||||||| | |||||||| ||| ||||    ||||||| ||| | | |||  ||    
T  34012408 tcttgttaatctgatgaattgatgatagtatgatgactgaacttttgatgccactttacaaacagtggagtgt----tactcactacagtgttgatgtta 34012503  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    |||||||||||||| || ||| ||  || |||||||||||||||| |||||||||||    
T  34012504 tagtgttaacttcatcataaacgtcattttcatgacttcaccatagaattttccttt 34012560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 21289808 - 21289742
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||||||||  ||||| |||||||||||||| |||||||||| |||||||||||    
T  21289808 tctgatgaattgatgatactatagggactgaacttttgatgccactgtacaaacagtggggtgttac 21289742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 4330429 - 4330288
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacact-ggggtgttacgtactcacaacactttcgat 100  Q
    ||||||| ||| |||||| ||||||||||||||||  |||| |||||||||| ||| |||||||||| | |||||||    ||||||| ||||||| |||    
T  4330429 cagtcttgttaatctgataaattgatgatactatgatgactgaacttttgatcccactgtacaaacattgggggtgt----tactcactacacttttgat 4330334  T
Q  101 actatagtg-ttaacttcaccagaaaagttgttctcatgacttcac 145  Q
     |||||||| ||| ||||| |||||||||  ||||||| |||||||    
T  4330333 gctatagtgtttatcttcatcagaaaagtcattctcataacttcac 4330288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 15383080 - 15382927
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||| |  |||| ||||||||||| ||||||||||||  |||| |||    ||||||  ||| ||| |||      
T  15383080 agtcttgttaatctgatgaattgatgatactacgatgactgaacttttgatgacattgtacaaacggtgggatgt----tactcattacatttttgatgt 15382985  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||||| ||||||| ||||||  || | || ||||||||||| ||||||||||    
T  15382984 tatagtgttaatttcaccaaaaaagtcatttttataacttcaccatagaattttcctt 15382927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 25160779 - 25160715
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaac 67  Q
    |||||| ||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  25160779 agtcttattaatctaatgaattgatgatactatgaggactgaacttttgatgccattgtacaaac 25160715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 3535077 - 3534925
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| |||||||||||||| ||| || | ||||| ||||||||||| || || ||||||| |  |||||    ||||||||||||||| |||  ||    
T  3535077 tcttgttaatctgatgaattgataatattaaggggactgaacttttgatgtcactgcacaaacagtaaggtgt----tactcacaacacttttgatgtta 3534982  T
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    ||||||||||||||| |||||| |  |||| |||||||||  ||| |||||||||||    
T  3534981 tagtgttaacttcactagaaaattaattctaatgacttcataatagaattttccttt 3534925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 19899810 - 19899950
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    |||||||||||||||||||||| ||  | |||||||||||||||| |||||||| || |||||    |||||   ||| ||| |||  ||||||||||||    
T  19899810 ctgatgaattgatgatactatgagggttgaacttttgatgccattctacaaacagtgaggtgt----tactcgttacatttttgatgttatagtgttaac 19899905  T
Q  115 ttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||| |||| |  || | |||||||||||||| |||||||||    
T  19899906 ttcaccaaaaaaatcattattatgacttcaccatagaattttcct 19899950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 27227516 - 27227579
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaaca 68  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  27227516 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgccactgtacaaaca 27227579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 27267228 - 27267376
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| |||||||||||||||||||||||  |||| ||||||| |||||| |||||||||| ||||||||     |||||| ||| |||  || |    
T  27267228 agtcttgttaatctgatgaattgatgatactatggagactgaacttttaatgccactgtacaaacagtggggtgt----cactcactacattttttatgc 27267323  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
      ||||||||||||||||| |||| |  |||||||||||||| |||| ||||||||    
T  27267324 --tagtgttaacttcaccaaaaaaatcattctcatgacttca-catataattttcc 27267376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 32216187 - 32216088
Alignment:
Q  18 atgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaacttc 117  Q
    ||||||||||||||||| | ||||| ||||||||| ||||||||||||||| ||| ||||    ||||||| ||| ||| |||  |||||||||||||||    
T  32216187 atgaattgatgatactacgaggactgaacttttgacgccattgtacaaacagtggtgtgt----tactcactacatttttgatgttatagtgttaacttc 32216092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 42721186 - 42721035
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||| | |||||||||||  | |||||||||| ||||||||    ||||||| | | |||  ||      
T  42721186 agtcttgttaatctgatgaattgatgatactatggggattgaacttttgatgttactgtacaaacagtggggtgt----tactcactatattttttatga 42721091  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||| | ||||||||||| |||| |  || |||||||||||||||| ||||||||    
T  42721090 tatagggctaacttcaccaaaaaaatcattttcatgacttcaccatagaattttcc 42721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 28564810 - 28564875
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaaca 68  Q
    |||||| ||| | ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  28564810 agtcttgttaatatgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaaca 28564875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 30254570 - 30254505
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaaca 68  Q
    |||||| ||| |||||||||||||||||||| || ||||| ||||||||||| |||||||||||||    
T  30254570 agtcttgttaatctgatgaattgatgatactttgaggactgaacttttgatgtcattgtacaaaca 30254505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 9903083 - 9903204
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | |||||||||||||||| |||||||| | ||||||||||| || ||||||||||  |||||||    ||||||| ||| ||| |||      
T  9903083 agtcttgttaatttgatgaattgatgatagtatgtggattgaacttttgatgtcactgtacaaacagcggggtgt----tactcactacagttttgatgt 9903178  T
Q  103 tatagtgttaacttcaccagaaaagt 128  Q
    |||||||||||||||| || ||||||    
T  9903179 tatagtgttaacttcatcaaaaaagt 9903204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 28769799 - 28769651
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | ||||||||||||||||||||| ||||  ||| ||||||||||||||||||||  | ||||||    ||||||  ||| ||| |||      
T  28769799 agtcttgttaatatgatgaattgatgatactatgaggaccgaacctttgatgccattgtacaaacggt-gggtgt----tactcattacatttttgatgt 28769705  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
     |||||||||||||||| | ||||||| || | |||||||||||||| ||||||    
T  28769704 catagtgttaacttcacaaaaaaagttatttttatgacttcaccatagaatttt 28769651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 40884958 - 40884841
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatacta 104  Q
    |||| ||| ||||||||||||| ||||||||  ||||| ||||||||||||||  ||||||||| |||||||     ||||||| ||||||| |||  ||    
T  40884958 tcttgttaatctgatgaattgaagatactatagggactgaacttttgatgccaccgtacaaacagtggggtg----ctactcactacacttttgatgtta 40884863  T
Q  105 tagtgttaacttcaccagaaaa 126  Q
    | ||||| ||||||||||||||    
T  40884862 tggtgttgacttcaccagaaaa 40884841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 30326992 - 30327045
Alignment:
Q  14 tctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaac 67  Q
    |||||||||||||||||||||||  |||| |||||||||||| |||||||||||    
T  30326992 tctgatgaattgatgatactatgatgactgaacttttgatgctattgtacaaac 30327045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 41926308 - 41926240
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggg 73  Q
    |||| ||| ||||||||||||||||||||||  ||||| ||||| |||||||| |||||||||| ||||    
T  41926308 tcttgttaatctgatgaattgatgatactatagggactgaacttgtgatgccactgtacaaacagtggg 41926240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 8222275 - 8222216
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgta 62  Q
    |||||| ||| | ||||||||||||||||||||| | ||| |||||||||||||||||||    
T  8222275 agtcttgttaatatgatgaattgatgatactatgagaactgaacttttgatgccattgta 8222216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 21289716 - 21289661
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||| | ||||||    
T  21289716 tatagtgttaacttcaccagaaaagtcattctcatgacttcacaatagatttttcc 21289661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 33725628 - 33725683
Alignment:
Q  2 cagtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgcca 57  Q
    ||||||| ||| | ||||||||||||||||||||| ||||| ||||||||||||||    
T  33725628 cagtcttgttaatatgatgaattgatgatactatgaggactgaacttttgatgcca 33725683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 23999482 - 23999343
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatactatagtgttaac 114  Q
    ||||||||||||| |||||||| || || ||||||||||| |||| |||||| | |||||||||||    ||   | | |||  ||  | ||||||||||    
T  23999482 ctgatgaattgataatactatgagggctgaacttttgatgtcattctacaaatagtggggtgttac----tcgttatattttttatgttgtagtgttaac 23999387  T
Q  115 ttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||| |||| |  |||| |||||||||||||||||||||||    
T  23999386 ttcaccaaaaaaatcattcttatgacttcaccataaaattttcc 23999343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 27227604 - 27227657
Alignment:
Q  105 tagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||| |||| |  ||||||||||||||||||| ||||||||    
T  27227604 tagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcc 27227657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 51129006 - 51128929
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    |||||| ||| | ||||||||||||||||||||   |||| ||||||||||| ||||||||||||  ||| |||||||    
T  51129006 agtcttgttaatatgatgaattgatgatactataatgactgaacttttgatgtcattgtacaaacggtggagtgttac 51128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 37451432 - 37451292
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| | |||| |||||||||||||| | ||||| ||||||||||| ||||||||||||  | ||||||||| || |    ||| ||| |||      
T  37451432 agtcttgttaatatgataaattgatgatacta-gaggactgaacttttgatgtcattgtacaaacggtagggtgttacttatt----acatttttgatgt 37451338  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccat 148  Q
    |||||||||||||| |||| ||||||  || | |||||||||||||    
T  37451337 tatagtgttaactttaccaaaaaagtcatttttatgacttcaccat 37451292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 43579290 - 43579242
Alignment:
Q  110 ttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||||||||    
T  43579290 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 43579242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 4150490 - 4150537
Alignment:
Q  113 acttcaccagaaaagttgttctcatgacttcaccataaaattttcctt 160  Q
    ||||||||||||||||  || |||||||||||||||| ||||||||||    
T  4150490 acttcaccagaaaagtcattatcatgacttcaccatagaattttcctt 4150537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 22170805 - 22170747
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    ||||||||||||||||  ||||||||  || |||||| ||||||||| |||||||||||    
T  22170805 tatagtgttaacttcattagaaaagtcattttcatgatttcaccatagaattttccttt 22170747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 26970310 - 26970260
Alignment:
Q  109 gttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||| ||||||  || ||||||||| ||||||||||||||||    
T  26970310 gttaacttcaccaaaaaagtcattatcatgactttaccataaaattttcct 26970260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 46931546 - 46931481
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||| |||| || || || |||||||||| || |||||||| |||||| ||||    
T  46931546 ctgatgaattgatgatattatgagggctgaatttttgatgccgttctacaaacagtggggtattac 46931481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 30254909 - 30254853
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    |||||||||||||||| || ||||||  || | |||||||||||||| |||||||||    
T  30254909 tatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaattttcct 30254853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 8038 - 7884
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||    ||||||  ||| ||| |||      
T  8038 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgt----tactcattacaattttgatgt 7943  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttccttt 161  Q
    |||||||||||||||| || ||||||  |||| || ||||||||||| |||||| ||||    
T  7942 tatagtgttaacttcatcaaaaaagtcattcttataacttcaccatagaatttttcttt 7884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 44108 - 43959
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||  ||||||||||    |||  ||| ||| ||||     
T  44108 agtcttattaatctgatgaattgatgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttac----tcattacatttttgatat 44013  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    ||||| ||||||||||||| ||||||  |||| | |||||||||||| ||||||    
T  44012 tatagcgttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttt 43959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 154679 - 154828
Alignment:
Q  3 agtcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttacgtactcacaacactttcgatac 102  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||  ||||||||||    |||  ||| ||| ||||     
T  154679 agtcttattaatctgatgaattgatgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttac----tcattacatttttgatat 154774  T
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaatttt 156  Q
    ||||| ||||||||||||| ||||||  |||| | |||||||||||| ||||||    
T  154775 tatagcgttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttt 154828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 42424 - 42347
Alignment:
Q  82 tactcacaacactttcgatactatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcct 159  Q
    ||||||||||||||| |||  |||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  42424 tactcacaacacttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataaaattttcct 42347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 100876 - 100817
Alignment:
Q  103 tatagtgttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcctttt 162  Q
    ||||| ||||||||||||| |||| |  ||||||||||||||||||| ||||||||||||    
T  100876 tatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcctttt 100817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 12058 - 11908
Alignment:
Q  5 tcttcttactctgatgaattgatgatactatgtggacttaacttttgatgccattg-tacaaacact-ggggtgttacgtactcacaacactttcgatac 102  Q
    |||| ||| |||||||||||||||||| |||| ||||| |||||||||| ||| || |||||||| | |||||||    |||||||||||||||  ||      
T  12058 tcttgttaatctgatgaattgatgatattatgaggactgaacttttgataccactgatacaaacaatgggggtgt----tactcacaacacttttaatgt 11963  T
Q  103 tatagtgttaacttcaccagaaaagt-tgttctcatgacttcaccataaaatttt 156  Q
    ||| ||||||| ||||||||||||||   ||||||||||||||||||| ||||||    
T  11962 tatggtgttaatttcaccagaaaagtcatttctcatgacttcaccatagaatttt 11908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 146062 - 146127
Alignment:
Q  15 ctgatgaattgatgatactatgtggacttaacttttgatgccattgtacaaacactggggtgttac 80  Q
    ||||||||||||||||||||||  | || ||||||||||| |||| |||||| | |||||||||||    
T  146062 ctgatgaattgatgatactatgaaggctgaacttttgatgtcattctacaaataatggggtgttac 146127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 12137 - 12186
Alignment:
Q  109 gttaacttcaccagaaaagttgttctcatgacttcaccataaaattttcc 158  Q
    ||||||||||||||||||||  ||||||| |||||| |||| ||||||||    
T  12137 gttaacttcaccagaaaagtcattctcataacttcatcatagaattttcc 12186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University