View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1983_high_3 (Length: 571)

Name: NF1983_high_3
Description: NF1983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1983_high_3
NF1983_high_3
[»] chr1 (3 HSPs)
chr1 (1-571)||(4428105-4428668)
chr1 (3-571)||(4439331-4439897)
chr1 (363-571)||(18991041-18991241)
[»] chr3 (13 HSPs)
chr3 (361-571)||(9494887-9495095)
chr3 (361-451)||(9448146-9448236)
chr3 (361-454)||(9343677-9343770)
chr3 (502-571)||(9617542-9617611)
chr3 (363-450)||(9329670-9329757)
chr3 (504-571)||(41985598-41985665)
chr3 (361-419)||(9432719-9432777)
chr3 (503-571)||(9425542-9425610)
chr3 (365-450)||(9336376-9336461)
chr3 (502-571)||(9407334-9407403)
chr3 (535-571)||(9336541-9336577)
chr3 (502-558)||(9402347-9402403)
chr3 (502-558)||(9420586-9420642)
[»] chr2 (3 HSPs)
chr2 (288-418)||(20694504-20694634)
chr2 (502-571)||(20694380-20694449)
chr2 (14-107)||(20695697-20695790)
[»] chr8 (1 HSPs)
chr8 (361-451)||(13170829-13170919)
[»] chr6 (5 HSPs)
chr6 (362-449)||(7012644-7012731)
chr6 (321-391)||(213314-213384)
chr6 (362-449)||(7025580-7025667)
chr6 (504-565)||(7012784-7012845)
chr6 (362-447)||(7041341-7041426)
[»] chr5 (1 HSPs)
chr5 (321-418)||(33541413-33541510)
[»] chr7 (1 HSPs)
chr7 (362-450)||(450315-450403)


Alignment Details
Target: chr1 (Bit Score: 511; Significance: 0; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 511; E-Value: 0
Query Start/End: Original strand, 1 - 571
Target Start/End: Original strand, 4428105 - 4428668
Alignment:
Q  1 ggagactggttacatcaatcatcaccgatccaaattgcatcttgtttcctgatctaaatacttaagattcctaataattagctaagtaatatatttggcc 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4428105 ggagactggttgcatcaatcatcaccgatccaaattgcatcttgtttcctgatccaaatacttaagattcctaataattagctaagtaatatatttggcc 4428204  T
Q  101 cagatttgtttctaaacatatatatattctgcaaaagcaaacaaggaaagaagataataaacggtcatcaatgttacatctggtttagaaactacataat 200  Q
    |||||||||||||||||||||||    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428205 cagatttgtttctaaacatatat----tctgcaaaagcaa-caaggaaagaagataataaacggtcatcaatgttacatctggtttagaaactacataat 4428299  T
Q  201 cataataataactaggcatggtgatgtaatgcatatattcatataatatttcaatttttctatttctgcaagtacagttgaaaaagattatctaatctga 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428300 cataataataactaggcatggtgatgtaatgcatatattcatataatatttcaatttttctatttctgcaagtacagttgaaaaagattatctaatctga 4428399  T
Q  301 caacggaaactaagcaaaataatgcaagataacatactcatttaggaacgcagcattcgccgatccactctgtaggtggccagaacaagttaaaatattc 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428400 caacggaaactaagcaaaataatgcaagataacatactcatttaggaacgcagcattcgccgatccactctgtaggtggccagaacaagttaaaatattc 4428499  T
Q  401 cggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacacagttctcatattgcatgtttttacaattaaaatggaggaaggcatcatca 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||     
T  4428500 cggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacacagttcccatattgcatgtttttacaattaaagtggaggaaggcatcatc- 4428598  T
Q  501 aaataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattc 571  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4428599 -aataaagatgacacaattccctttagtaacagacaactcagaagcagaggcagaaaacaaacatccattc 4428668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 3 - 571
Target Start/End: Original strand, 4439331 - 4439897
Alignment:
Q  3 agactggttacatcaatcatcaccgatccaaattgcatcttgtttcctgatctaaatacttaagattcctaataattagctaagtaata---tatttggc 99  Q
    |||||||||||||||||||||||  |||||||||||||||||||| || ||| ||||| |||||||||| |||||||||||||||||||   |||||||     
T  4439331 agactggttacatcaatcatcactaatccaaattgcatcttgtttactaatccaaatatttaagattcccaataattagctaagtaataatatatttggt 4439430  T
Q  100 ccagatttgtttctaaacatatatatattctgcaaaagcaaacaaggaaagaagataataaacggtcatcaatgtt---acatctggtttagaaactaca 196  Q
    ||||||||||| |||||||||||     |||||||||| || ||||||||||||||||||||||||||||||||||   |||||| ||||||||||||||    
T  4439431 ccagatttgttgctaaacatatag----tctgcaaaagtaa-caaggaaagaagataataaacggtcatcaatgttgttacatctagtttagaaactaca 4439525  T
Q  197 taatcataataataactaggcatggtgatgtaatgcatatattcatataatatttcaatttttctatttctgcaagtacagttgaaaaagattatctaat 296  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  4439526 taatcataataataactaggcatggtgatgtaaagcacatattcatataatattttaatttttctatttctgcaagtacagttgaaaa-gattatctaat 4439624  T
Q  297 ctgacaacggaaactaagcaaaataatgcaagataacatactcatttaggaacgcagcattcgccgatccactctgtaggtggccagaacaagttaaaat 396  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  4439625 ctgacaacggaagctaagcaaaataatgcaagataacatactcatttaggaacgcaacattcgccgatccactctgcaggtggccagaacaagttaaaat 4439724  T
Q  397 attccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacacagttctcatattgcatgtttttacaattaaaatggaggaaggcatc 496  Q
    | || ||||||||||||||||||| |||||  | ||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  4439725 agtcaggacaatcagacaaaggcgaaagctttccttgatccaagtcaaaaacacagttcccatattgcatgtttttaccattaaaattgaggaaggcatc 4439824  T
Q  497 atcaaaataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattc 571  Q
    |||  |||||||||||||| ||||||||||| |||| |||| || |||||||| |||||||||||||||||||||    
T  4439825 atc--aataaagatgacacaattccctttagaaacacacaaatccgaagcagaagcagaaaacgaacatccattc 4439897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 363 - 571
Target Start/End: Original strand, 18991041 - 18991241
Alignment:
Q  363 atccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacacagttctcatatt 462  Q
    |||||||| | |||||||||||||||||| || || || ||| ||| ||||||||| | ||||    |||  |||||||||||||||||  || || ||     
T  18991041 atccactccggaggtggccagaacaagttgaagtagtcaggataatgagacaaaggagaaagcctttgttcgtccaagtcaaaaacacacatcccacatc 18991140  T
Q  463 gcatgtttttacaattaaaatggaggaaggcatcatcaaaataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaa 562  Q
    |||||||      || |||| ||| ||| ||||| ||||  |||||| ||||| |||||||||   |||||| || ||||||||||| ||||||||||||    
T  18991141 gcatgtt------atcaaaagggatgaacgcatcgtcaa--taaagacgacacaattccctttgacaacagataaatcagaagcagaagcagaaaacgaa 18991232  T
Q  563 catccattc 571  Q
    |||||||||    
T  18991233 catccattc 18991241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 7e-35; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 361 - 571
Target Start/End: Complemental strand, 9495095 - 9494887
Alignment:
Q  361 cgatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacacagttctcata 460  Q
    ||||||| || | ||||||||||||||||||||||||||| ||||| ||| ||||||||| || | | | || | ||||||||||||  || ||| ||||    
T  9495095 cgatccaatccggaggtggccagaacaagttaaaatattcaggacagtcacacaaaggcgaaacccgaccttcaaccaagtcaaaaatgcaattcccata 9494996  T
Q  461 ttgcatgtttttacaattaaaatggaggaaggcatcatcaaaataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacg 560  Q
    | | ||||||| | ||||||||| ||||| ||| |||||||  |||||||||||| ||||||||| | |||  |||| ||||||||||| ||||||||||    
T  9494995 tagaatgttttcaaaattaaaattgaggatggcgtcatcaa--taaagatgacacaattccctttggaaacgcacaaatcagaagcagaagcagaaaacg 9494898  T
Q  561 aacatccattc 571  Q
    |||||||||||    
T  9494897 aacatccattc 9494887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 451
Target Start/End: Original strand, 9448146 - 9448236
Alignment:
Q  361 cgatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacaca 451  Q
    |||||||||||| |||||||||||||||||| |||  ||| || |||||||||||||| | |||| ||| ||||||||||| |||||||||    
T  9448146 cgatccactctggaggtggccagaacaagttcaaaatttcagggcaatcagacaaaggtgaaagcaggccttgatccaagtaaaaaacaca 9448236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 361 - 454
Target Start/End: Original strand, 9343677 - 9343770
Alignment:
Q  361 cgatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacacagtt 454  Q
    |||||||||| | |||||||||||||||| |||||||||| ||||||||||||| ||| | |||| | | |||||||| || ||||||||||||    
T  9343677 cgatccactccggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccatgtgaaaaacacagtt 9343770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 502 - 571
Target Start/End: Complemental strand, 9617611 - 9617542
Alignment:
Q  502 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattc 571  Q
    |||||||||||||| ||||||||| | |||| |||| || |||||||| |||||||| ||||||||||||    
T  9617611 aataaagatgacacaattccctttggaaacacacaaatctgaagcagaagcagaaaatgaacatccattc 9617542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 450
Target Start/End: Original strand, 9329670 - 9329757
Alignment:
Q  363 atccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacac 450  Q
    |||||||||| ||||||||||||||| || |||||||| ||| |||| |||||||| | |  ||| | ||||||||||| ||||||||    
T  9329670 atccactctggaggtggccagaacaacttgaaatattcaggataatccgacaaaggtgaagcctgaccttgatccaagtgaaaaacac 9329757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 504 - 571
Target Start/End: Original strand, 41985598 - 41985665
Alignment:
Q  504 taaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattc 571  Q
    |||||||||||| ||| |||||   ||||||||| || |||||||| |||||||||||||||||||||    
T  41985598 taaagatgacacaatttcctttgacaacagacaaatccgaagcagaagcagaaaacgaacatccattc 41985665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 9432719 - 9432777
Alignment:
Q  361 cgatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggc 419  Q
    |||||||||| | ||||||||||||||||||  ||||||| ||| ||||||||||||||    
T  9432719 cgatccactccggaggtggccagaacaagttgtaatattcaggataatcagacaaaggc 9432777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 571
Target Start/End: Original strand, 9425542 - 9425610
Alignment:
Q  503 ataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattc 571  Q
    ||||||||||||| ||||||||| | |||| |||| || ||||| || |||||||| ||||||||||||    
T  9425542 ataaagatgacacaattccctttggcaacacacaaatccgaagctgaagcagaaaatgaacatccattc 9425610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 450
Target Start/End: Original strand, 9336376 - 9336461
Alignment:
Q  365 ccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacac 450  Q
    |||| ||| ||||||||||||||| || |||||||| ||| |||| |||||||| | |  ||| | ||||||||||| ||||||||    
T  9336376 ccacgctggaggtggccagaacaacttgaaatattcgggataatccgacaaaggtgaagcctgaccttgatccaagtgaaaaacac 9336461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 571
Target Start/End: Original strand, 9407334 - 9407403
Alignment:
Q  502 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattc 571  Q
    |||||||| ||||| ||||||||| | |||| |||| || ||||| || |||||||| ||||||||||||    
T  9407334 aataaagaagacacaattccctttggcaacacacaaatccgaagctgaagcagaaaatgaacatccattc 9407403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 535 - 571
Target Start/End: Original strand, 9336541 - 9336577
Alignment:
Q  535 caactcagaagcagaggcagaaaacgaacatccattc 571  Q
    |||||| |||||||| |||||||||||||||||||||    
T  9336541 caactcggaagcagaagcagaaaacgaacatccattc 9336577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 558
Target Start/End: Original strand, 9402347 - 9402403
Alignment:
Q  502 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaa 558  Q
    ||||||||||| || ||||||||||| |||| |||| || || ||||||||||||||    
T  9402347 aataaagatgatacaattccctttaggaacacacaaatctgaggcagaggcagaaaa 9402403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 558
Target Start/End: Original strand, 9420586 - 9420642
Alignment:
Q  502 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaa 558  Q
    ||||||||||| || ||||||||||| |||| |||| || || ||||||||||||||    
T  9420586 aataaagatgatacaattccctttaggaacacacaaatctgaggcagaggcagaaaa 9420642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 288 - 418
Target Start/End: Complemental strand, 20694634 - 20694504
Alignment:
Q  288 ttatctaatctgacaacggaaactaagcaaaataatgcaagataacatactcatttaggaacgcagcattcgccgatccactctgtaggtggccagaaca 387  Q
    ||||||||||||||| ||||||||||||  ||||| | |||||||||||||||  ||| || |||| |||   |||||||||| | ||| ||||||||||    
T  20694634 ttatctaatctgacagcggaaactaagctgaataacggaagataacatactcaactagaaatgcaggattttacgatccactcaggaggaggccagaaca 20694535  T
Q  388 agttaaaatattccggacaatcagacaaagg 418  Q
    ||||||||||||| ||| |||| ||||||||    
T  20694534 agttaaaatattcaggataatcggacaaagg 20694504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 502 - 571
Target Start/End: Complemental strand, 20694449 - 20694380
Alignment:
Q  502 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattc 571  Q
    |||||||||||||| ||||||||| | |||| |||| || |||||||| |||||||||||||||||||||    
T  20694449 aataaagatgacacaattccctttggcaacacacaaatccgaagcagaagcagaaaacgaacatccattc 20694380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 20695790 - 20695697
Alignment:
Q  14 atcaatcatcaccgatccaaattgcatcttgtttcctgatctaaatacttaagattcctaataattagctaagtaatatatttggcccagattt 107  Q
    ||||| |||||  ||||| ||| ||| | |||||||| |||  |||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  20695790 atcaaccatcattgatcccaatagcaacctgtttcctaatcccaatatttaagattcctaataattagctcagcaatatatttggcccagattt 20695697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 361 - 451
Target Start/End: Complemental strand, 13170919 - 13170829
Alignment:
Q  361 cgatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacaca 451  Q
    ||||||| |||| ||||||||| |||||||| || || || ||||||||||| ||||| | |||| ||| ||||||||||| |||||||||    
T  13170919 cgatccattctggaggtggccaaaacaagttgaagtactcgggacaatcagataaaggggaaagccggcattgatccaagtgaaaaacaca 13170829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 449
Target Start/End: Original strand, 7012644 - 7012731
Alignment:
Q  362 gatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaaca 449  Q
    ||||||||||| ||||||||| ||||||||  ||||||| ||||||||||||||| ||| | |  | | |||||||||||| ||||||    
T  7012644 gatccactctgcaggtggccataacaagttggaatattcgggacaatcagacaaaagcgaatgtcgaccttgatccaagtccaaaaca 7012731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 213384 - 213314
Alignment:
Q  321 aatgcaagataacatactcatttaggaacgcagcattcgccgatccactctgtaggtggccagaacaagtt 391  Q
    |||||||||||||||||||| ||| |||  |||| || | |||||||||| | ||||||||||||||||||    
T  213384 aatgcaagataacatactcacttacgaattcagcttttgacgatccactcgggaggtggccagaacaagtt 213314  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 449
Target Start/End: Original strand, 7025580 - 7025667
Alignment:
Q  362 gatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaaca 449  Q
    ||||||||||| ||||||||||||||||||  ||||||| ||| |||| |||||| ||| | || | | | |||||||||| ||||||    
T  7025580 gatccactctggaggtggccagaacaagttggaatattcaggataatcggacaaaagcgaatgccgacctagatccaagtccaaaaca 7025667  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 565
Target Start/End: Original strand, 7012784 - 7012845
Alignment:
Q  504 taaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacat 565  Q
    |||||||||||  ||||||||| | |||| |||| || |||||| |||||||||||||||||    
T  7012784 taaagatgacagaattccctttggcaacacacaaatccgaagcacaggcagaaaacgaacat 7012845  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 447
Target Start/End: Original strand, 7041341 - 7041426
Alignment:
Q  362 gatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaa 447  Q
    |||||||| || ||||||||||||||||||  ||||||| ||| ||||||| | ||||| | || | | |||||||||||| ||||    
T  7041341 gatccactttggaggtggccagaacaagttggaatattcaggataatcagatagaggcgaatgccgaccttgatccaagtccaaaa 7041426  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 33541413 - 33541510
Alignment:
Q  321 aatgcaagataacatactcatttaggaacgcagcattcgccgatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaagg 418  Q
    |||||| | ||||||||||| ||| ||| ||||| || | |||||||||||| |||  ||  ||||||||| |||||||||||| |||| ||||||||    
T  33541413 aatgcaggttaacatactcagttacgaatgcagcttttgacgatccactctggaggctgcgggaacaagttgaaatattccggataatcggacaaagg 33541510  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 450
Target Start/End: Complemental strand, 450403 - 450315
Alignment:
Q  362 gatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacac 450  Q
    |||||| |||| ||||||||||||||| || ||||| |||||| |||||||||| || | || | | | ||||||||||| ||||||||    
T  450403 gatccaatctggaggtggccagaacaacttgaaataatccggataatcagacaagggtgaaacccgaccttgatccaagtgaaaaacac 450315  T

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