View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19841_high_2 (Length: 760)

Name: NF19841_high_2
Description: NF19841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19841_high_2
NF19841_high_2
[»] chr5 (36 HSPs)
chr5 (258-408)||(41666852-41667001)
chr5 (260-408)||(95363-95509)
chr5 (260-408)||(24269967-24270114)
chr5 (260-408)||(24346598-24346745)
chr5 (263-408)||(15480398-15480541)
chr5 (122-252)||(30073390-30073523)
chr5 (262-368)||(15590053-15590158)
chr5 (262-408)||(17352533-17352676)
chr5 (457-511)||(27903382-27903436)
chr5 (260-409)||(9368670-9368817)
chr5 (260-368)||(8081211-8081318)
chr5 (415-511)||(11682227-11682325)
chr5 (276-408)||(25258178-25258309)
chr5 (276-408)||(25321968-25322099)
chr5 (287-406)||(18333587-18333705)
chr5 (287-410)||(32908840-32908962)
chr5 (276-362)||(33337350-33337436)
chr5 (276-408)||(20510754-20510884)
chr5 (276-408)||(24531675-24531806)
chr5 (293-335)||(6919323-6919365)
chr5 (262-408)||(26137208-26137353)
chr5 (427-491)||(16707059-16707123)
chr5 (260-332)||(30770146-30770217)
chr5 (262-332)||(18885378-18885447)
chr5 (287-329)||(38731725-38731767)
chr5 (435-512)||(25436166-25436243)
chr5 (287-408)||(43117723-43117843)
chr5 (254-330)||(11682298-11682374)
chr5 (260-332)||(17015973-17016043)
chr5 (299-361)||(16704618-16704680)
chr5 (415-512)||(17899481-17899579)
chr5 (263-329)||(24528694-24528759)
chr5 (39-113)||(30073556-30073630)
chr5 (299-408)||(17150368-17150476)
chr5 (427-472)||(37782084-37782129)
chr5 (458-511)||(42490575-42490628)
[»] chr6 (29 HSPs)
chr6 (258-408)||(4868672-4868821)
chr6 (258-408)||(13353277-13353425)
chr6 (258-408)||(33796402-33796550)
chr6 (260-408)||(9705096-9705241)
chr6 (260-408)||(12330041-12330187)
chr6 (258-361)||(6400715-6400817)
chr6 (260-399)||(17147757-17147894)
chr6 (428-512)||(3823269-3823353)
chr6 (260-408)||(6542805-6542951)
chr6 (260-408)||(33494615-33494761)
chr6 (278-358)||(33631684-33631764)
chr6 (263-394)||(31961033-31961162)
chr6 (421-511)||(30711244-30711336)
chr6 (427-506)||(12329978-12330057)
chr6 (461-511)||(27993473-27993523)
chr6 (255-308)||(6311989-6312042)
chr6 (427-511)||(20830715-20830800)
chr6 (457-512)||(2297676-2297731)
chr6 (287-410)||(3680086-3680208)
chr6 (266-329)||(7638693-7638755)
chr6 (457-508)||(12319738-12319789)
chr6 (457-512)||(31996877-31996932)
chr6 (415-472)||(3921800-3921858)
chr6 (348-410)||(8001498-8001560)
chr6 (255-329)||(20830667-20830741)
chr6 (260-330)||(30256730-30256800)
chr6 (457-511)||(30392668-30392722)
chr6 (348-405)||(3823380-3823437)
chr6 (460-512)||(34847061-34847111)
[»] chr2 (40 HSPs)
chr2 (258-408)||(14466270-14466418)
chr2 (260-408)||(5711536-5711683)
chr2 (260-506)||(37812365-37812611)
chr2 (258-408)||(2029845-2029993)
chr2 (260-408)||(16419343-16419489)
chr2 (260-408)||(40379306-40379452)
chr2 (255-408)||(33381044-33381199)
chr2 (260-410)||(40149100-40149246)
chr2 (258-368)||(17525194-17525303)
chr2 (122-252)||(27487560-27487691)
chr2 (435-514)||(30006621-30006700)
chr2 (269-354)||(13250127-13250212)
chr2 (297-394)||(18607142-18607238)
chr2 (299-408)||(21383569-21383678)
chr2 (260-365)||(33606151-33606255)
chr2 (260-408)||(15124645-15124791)
chr2 (293-408)||(93248-93362)
chr2 (435-514)||(30063309-30063388)
chr2 (264-406)||(13210604-13210745)
chr2 (288-406)||(16533390-16533507)
chr2 (309-410)||(17719474-17719574)
chr2 (435-511)||(15988179-15988255)
chr2 (255-335)||(41069255-41069335)
chr2 (463-511)||(43819441-43819489)
chr2 (296-407)||(19110319-19110430)
chr2 (459-509)||(7209092-7209142)
chr2 (459-504)||(7748204-7748249)
chr2 (440-512)||(13250304-13250376)
chr2 (427-511)||(19571008-19571092)
chr2 (427-506)||(40149037-40149116)
chr2 (276-383)||(44404038-44404146)
chr2 (459-510)||(11099669-11099720)
chr2 (436-511)||(38629807-38629882)
chr2 (255-389)||(21383381-21383515)
chr2 (415-472)||(37812289-37812347)
chr2 (254-332)||(37828368-37828445)
chr2 (264-408)||(42895323-42895467)
chr2 (458-511)||(30001979-30002032)
chr2 (435-472)||(37840342-37840379)
chr2 (459-512)||(38580876-38580929)
[»] chr3 (31 HSPs)
chr3 (254-511)||(13574775-13575039)
chr3 (276-408)||(16239667-16239799)
chr3 (262-408)||(4155400-4155544)
chr3 (260-424)||(34992666-34992828)
chr3 (260-406)||(35038291-35038434)
chr3 (260-357)||(39683365-39683461)
chr3 (299-403)||(31150924-31151028)
chr3 (255-406)||(22775490-22775641)
chr3 (288-368)||(20327738-20327818)
chr3 (427-483)||(31317460-31317516)
chr3 (293-410)||(20303279-20303395)
chr3 (436-512)||(30179751-30179827)
chr3 (465-511)||(26916362-26916408)
chr3 (437-511)||(41915137-41915211)
chr3 (255-410)||(45828093-45828238)
chr3 (433-498)||(8487553-8487617)
chr3 (347-408)||(12930075-12930136)
chr3 (287-332)||(19954340-19954385)
chr3 (457-506)||(21387326-21387375)
chr3 (276-332)||(31317382-31317438)
chr3 (435-511)||(45828212-45828288)
chr3 (299-383)||(46139362-46139446)
chr3 (273-408)||(15019390-15019524)
chr3 (458-509)||(27484890-27484941)
chr3 (293-366)||(49629722-49629796)
chr3 (457-511)||(50052830-50052884)
chr3 (437-511)||(50930668-50930742)
chr3 (264-329)||(272507-272572)
chr3 (427-472)||(3975392-3975437)
chr3 (288-361)||(20303188-20303261)
chr3 (375-408)||(39620168-39620201)
[»] chr4 (46 HSPs)
chr4 (260-408)||(28245623-28245769)
chr4 (287-408)||(35788735-35788856)
chr4 (146-252)||(14119251-14119358)
chr4 (294-408)||(35819023-35819136)
chr4 (275-408)||(52559643-52559777)
chr4 (263-408)||(6218280-6218423)
chr4 (260-447)||(27634178-27634365)
chr4 (276-408)||(22231185-22231316)
chr4 (257-368)||(5398569-5398679)
chr4 (258-408)||(35796837-35796985)
chr4 (258-408)||(40717301-40717449)
chr4 (256-335)||(43743132-43743211)
chr4 (276-408)||(50543442-50543575)
chr4 (405-511)||(18981532-18981634)
chr4 (255-408)||(7926404-7926550)
chr4 (378-506)||(20726803-20726937)
chr4 (264-410)||(31944997-31945141)
chr4 (257-361)||(5398305-5398407)
chr4 (435-511)||(12005511-12005587)
chr4 (254-332)||(12005560-12005642)
chr4 (459-511)||(31943329-31943381)
chr4 (270-393)||(25324140-25324263)
chr4 (255-410)||(30530018-30530172)
chr4 (461-511)||(8904535-8904585)
chr4 (287-332)||(1215990-1216035)
chr4 (263-332)||(17111685-17111752)
chr4 (122-229)||(14089452-14089560)
chr4 (437-509)||(21041319-21041391)
chr4 (435-475)||(33107872-33107912)
chr4 (435-506)||(6218410-6218481)
chr4 (457-512)||(21393309-21393364)
chr4 (299-406)||(22822428-22822535)
chr4 (458-513)||(23209806-23209860)
chr4 (458-509)||(33108075-33108126)
chr4 (348-407)||(40716569-40716628)
chr4 (270-332)||(1215906-1215968)
chr4 (348-406)||(4464373-4464431)
chr4 (270-368)||(6666506-6666604)
chr4 (260-366)||(6778540-6778645)
chr4 (427-497)||(26030293-26030362)
chr4 (278-368)||(35645279-35645369)
chr4 (278-368)||(35645568-35645658)
chr4 (287-408)||(4645718-4645838)
chr4 (307-408)||(4905644-4905744)
chr4 (287-332)||(21646390-21646435)
chr4 (459-512)||(30971690-30971743)
[»] chr8 (40 HSPs)
chr8 (257-408)||(8084203-8084352)
chr8 (258-408)||(11232289-11232437)
chr8 (260-366)||(3157106-3157211)
chr8 (260-408)||(39052791-39052937)
chr8 (287-403)||(18004217-18004332)
chr8 (276-408)||(20301337-20301468)
chr8 (276-408)||(21087969-21088100)
chr8 (276-408)||(41790734-41790865)
chr8 (287-408)||(12688148-12688268)
chr8 (264-408)||(3157425-3157567)
chr8 (427-511)||(10614973-10615057)
chr8 (256-345)||(37867925-37868014)
chr8 (435-511)||(31079604-31079680)
chr8 (261-329)||(31079660-31079728)
chr8 (296-408)||(31197690-31197801)
chr8 (260-408)||(37868445-37868591)
chr8 (263-371)||(39052637-39052744)
chr8 (428-511)||(8466759-8466842)
chr8 (256-351)||(37868165-37868260)
chr8 (258-383)||(35682876-35683000)
chr8 (280-408)||(5675937-5676064)
chr8 (264-332)||(29006007-29006074)
chr8 (254-409)||(10615469-10615623)
chr8 (287-366)||(39960074-39960153)
chr8 (428-498)||(12289204-12289274)
chr8 (262-332)||(20094659-20094728)
chr8 (415-511)||(7729907-7730004)
chr8 (260-332)||(5675831-5675902)
chr8 (254-330)||(8849335-8849411)
chr8 (354-410)||(38476112-38476168)
chr8 (293-332)||(15797137-15797176)
chr8 (458-511)||(10615596-10615649)
chr8 (308-408)||(15042793-15042894)
chr8 (349-410)||(26208198-26208259)
chr8 (456-511)||(8715617-8715672)
chr8 (287-329)||(8715799-8715841)
chr8 (457-511)||(8716317-8716371)
chr8 (427-472)||(5675768-5675813)
chr8 (455-512)||(6462924-6462981)
chr8 (427-472)||(29099774-29099819)
[»] scaffold0519 (1 HSPs)
scaffold0519 (258-408)||(1992-2140)
[»] chr7 (44 HSPs)
chr7 (258-410)||(1596667-1596817)
chr7 (293-408)||(25620212-25620326)
chr7 (258-408)||(21861370-21861518)
chr7 (258-408)||(36277086-36277234)
chr7 (260-408)||(33834267-33834413)
chr7 (258-408)||(29469681-29469829)
chr7 (260-410)||(22574675-22574823)
chr7 (260-361)||(3519822-3519922)
chr7 (287-408)||(3519927-3520047)
chr7 (287-408)||(4886405-4886525)
chr7 (260-405)||(31892231-31892374)
chr7 (261-409)||(30727216-30727364)
chr7 (428-503)||(40898957-40899032)
chr7 (348-410)||(26239864-26239926)
chr7 (260-332)||(40746130-40746200)
chr7 (261-408)||(2404272-2404416)
chr7 (457-495)||(10420916-10420954)
chr7 (458-507)||(19065094-19065143)
chr7 (263-331)||(1936212-1936280)
chr7 (457-509)||(10420714-10420766)
chr7 (427-511)||(21213075-21213159)
chr7 (134-253)||(20935118-20935237)
chr7 (299-408)||(33996214-33996319)
chr7 (435-497)||(2937947-2938009)
chr7 (262-332)||(18826352-18826421)
chr7 (159-257)||(21592570-21592668)
chr7 (255-332)||(22339459-22339536)
chr7 (437-511)||(47849537-47849611)
chr7 (287-332)||(2315149-2315194)
chr7 (430-511)||(8125443-8125524)
chr7 (287-408)||(36993196-36993316)
chr7 (294-367)||(48661450-48661523)
chr7 (463-511)||(2600609-2600657)
chr7 (435-511)||(23794398-23794474)
chr7 (436-511)||(24612763-24612838)
chr7 (435-506)||(31892358-31892429)
chr7 (293-332)||(35308275-35308314)
chr7 (427-506)||(40898749-40898828)
chr7 (427-472)||(3392987-3393032)
chr7 (421-506)||(4507136-4507221)
chr7 (458-511)||(11473326-11473379)
chr7 (287-328)||(14540864-14540905)
chr7 (437-506)||(35308190-35308259)
chr7 (459-511)||(47849758-47849808)
[»] chr1 (43 HSPs)
chr1 (293-408)||(39348246-39348361)
chr1 (258-472)||(4112635-4112850)
chr1 (276-477)||(369635-369839)
chr1 (287-408)||(2859515-2859635)
chr1 (260-408)||(4112868-4113014)
chr1 (260-408)||(35772105-35772251)
chr1 (260-394)||(25713248-25713380)
chr1 (258-408)||(26176984-26177132)
chr1 (260-410)||(38668199-38668347)
chr1 (250-331)||(12325383-12325464)
chr1 (263-331)||(12376537-12376605)
chr1 (436-511)||(12376480-12376555)
chr1 (435-509)||(49142921-49142995)
chr1 (122-229)||(22095983-22096092)
chr1 (263-408)||(35892132-35892275)
chr1 (427-511)||(52907350-52907434)
chr1 (259-361)||(7307843-7307944)
chr1 (287-408)||(4098291-4098411)
chr1 (260-408)||(25145582-25145728)
chr1 (299-408)||(33156809-33156918)
chr1 (260-332)||(8870786-8870857)
chr1 (436-511)||(12325339-12325414)
chr1 (260-408)||(38733227-38733369)
chr1 (260-410)||(16163007-16163154)
chr1 (262-408)||(27413423-27413567)
chr1 (437-514)||(49316189-49316266)
chr1 (260-330)||(51460179-51460248)
chr1 (255-328)||(9146646-9146718)
chr1 (311-408)||(30369911-30370007)
chr1 (435-488)||(42351902-42351955)
chr1 (435-512)||(49868450-49868527)
chr1 (288-409)||(51460331-51460451)
chr1 (348-412)||(5953685-5953749)
chr1 (440-512)||(26229533-26229605)
chr1 (263-366)||(34264586-34264688)
chr1 (276-403)||(52961428-52961554)
chr1 (427-477)||(31004471-31004521)
chr1 (276-330)||(51459817-51459871)
chr1 (435-488)||(10991815-10991868)
chr1 (264-361)||(17208676-17208773)
chr1 (458-495)||(19622475-19622512)
chr1 (435-472)||(26347010-26347047)
chr1 (428-477)||(31181548-31181597)
[»] scaffold0692 (1 HSPs)
scaffold0692 (278-408)||(5633-5762)
[»] scaffold0041 (2 HSPs)
scaffold0041 (428-503)||(67252-67327)
scaffold0041 (427-506)||(67456-67535)
[»] scaffold0048 (1 HSPs)
scaffold0048 (258-332)||(81992-82065)
[»] scaffold0045 (2 HSPs)
scaffold0045 (458-511)||(41270-41323)
scaffold0045 (349-408)||(41156-41214)
[»] scaffold0459 (1 HSPs)
scaffold0459 (276-383)||(13197-13305)
[»] scaffold0366 (2 HSPs)
scaffold0366 (276-383)||(10838-10946)
scaffold0366 (276-383)||(14504-14612)
[»] scaffold0129 (1 HSPs)
scaffold0129 (302-472)||(14308-14484)
[»] scaffold0083 (1 HSPs)
scaffold0083 (275-402)||(51355-51481)
[»] scaffold0003 (2 HSPs)
scaffold0003 (254-409)||(87665-87819)
scaffold0003 (435-509)||(102184-102258)
[»] scaffold0729 (1 HSPs)
scaffold0729 (260-366)||(2611-2716)


Alignment Details
Target: chr5 (Bit Score: 75; Significance: 4e-34; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 258 - 408
Target Start/End: Original strand, 41666852 - 41667001
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| |||   ||||||||||    
T  41666852 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgat 41666950  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||| |||||| || | |||||||||||||||||||| |||||||||||||    
T  41666951 agcaggtggcccaacggatcttggaggaggctctgataccatcttagaaat 41667001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 95363 - 95509
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| || |  ||||||||||||    
T  95363 tccgatgtgtgactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatag 95461  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  95462 caggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 95509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 24269967 - 24270114
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||| ||||||||| ||||||||||||||| ||  ||| |||   ||||||||||||    
T  24269967 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatag 24270065  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||||| || | |||||||||||||||||||| |||||||| ||||    
T  24270066 caggtggcccaatggatcttggaggaggctctgataccatcttaaaaat 24270114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 24346598 - 24346745
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||| ||||||||| ||||||||||||||| ||  ||| |||   ||||||||||||    
T  24346598 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatag 24346696  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||||| || | |||||||||||||||||||| |||||||| ||||    
T  24346697 caggtggcccaatggatcttggaggaggctctgataccatcttaaaaat 24346745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 263 - 408
Target Start/End: Complemental strand, 15480541 - 15480398
Alignment:
Q  263 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 362  Q
    |||||| ||||||| |||||| ||||||| ||||||||| ||| |||||||||| ||||||||||||||| ||  ||||||||  ||||||||||||||     
T  15480541 gatgtgggactctt-aacacacctcctcacgaccagcacgattaggcttggttcatggacataaatggtgggtggcccaatagcggaaacctgatagcag 15480443  T
Q  363 gtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||||| || | ||||| || ||||||||||| |||||||||||||    
T  15480442 gtggcccaatggatctt-gaagaggctctgataccatcttagaaat 15480398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 122 - 252
Target Start/End: Complemental strand, 30073523 - 30073390
Alignment:
Q  122 acacaatgcgacaatgattgttatgtgctttagcatgttctaggcttta--actaaaact-atttaaacatcatcaaagaaatctagataatgaacatca 218  Q
    |||||||| ||||| |||||||  |||||||| ||||||||| ||||||  ||||||||| |||||||||||||||||  ||||||| |||| |||||||    
T  30073523 acacaatgagacaaggattgttgggtgctttaacatgttctatgctttataactaaaacttatttaaacatcatcaaatgaatctagctaataaacatca 30073424  T
Q  219 ttaaaatacaatcctagcactataagcaacttca 252  Q
    | |||| ||||  ||| |||||||||||||||||    
T  30073423 tcaaaacacaaatctaacactataagcaacttca 30073390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 15590158 - 15590053
Alignment:
Q  262 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 361  Q
    ||||||||||||||| |||||| | ||||| |||||||||||||||| ||||||| ||||||||||||||||||  ||| ||||  ||||| ||||||||    
T  15590158 cgatgtgagactctt-aacacaccccctcacgaccagcactattgggtttggttcgtggacataaatggtgagtagcccgatagcggaaacttgatagca 15590060  T
Q  362 agtggcc 368  Q
     ||||||    
T  15590059 ggtggcc 15590053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 17352533 - 17352676
Alignment:
Q  262 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 361  Q
    ||||||| ||||||| |||||| ||||| | |||||||| ||||||||||||||| |||||||||| |||  ||  ||||||||  ||||||||||||||    
T  17352533 cgatgtgggactctt-aacacacctccttacgaccagcattattgggcttggttcgtggacataaacggtaggtgacccaatagcggaaacctgatagca 17352631  T
Q  362 agtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    ||||| |  ||| ||||| || ||||||||||| |||||||||||||    
T  17352632 agtgg-ctcaaggatctt-gaagaggctctgataccatcttagaaat 17352676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 457 - 511
Target Start/End: Complemental strand, 27903436 - 27903382
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27903436 ccacttataaacacatgttcatgtcatattttatcggatgtgagactctttaaca 27903382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 260 - 409
Target Start/End: Complemental strand, 9368817 - 9368670
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| || ||| | ||||| |||||||||||||||| ||||||| |||||||| |||||| ||   |||||||  ||||||||||||    
T  9368817 tccgatgtgggactctt-aagacaccccctcacgaccagcactattgggtttggttcgtggacatacatggtgggtggtccaatagcggaaacctgatag 9368719  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt 409  Q
    || |||||| || | ||||| || ||||||||||| ||| ||||||||||    
T  9368718 caggtggcccaatggatctt-gaagaggctctgataccaccttagaaatt 9368670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 260 - 368
Target Start/End: Original strand, 8081211 - 8081318
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   || ||||| || |||||||||    
T  8081211 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgataggggatacctgatag 8081309  T
Q  360 caagtggcc 368  Q
    || ||||||    
T  8081310 caggtggcc 8081318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 415 - 511
Target Start/End: Original strand, 11682227 - 11682325
Alignment:
Q  415 taactcatcctt-caaaatcagcttgtgaggtgatgattt-tctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||||||| ||||||||| |||||| |||| ||||| || | |||||||||||||| ||||  ||||||||| ||||||||||||||||||||||    
T  11682227 taactcatccttgcaaaatcagattgtgatgtgaggatttgtcccgacttataaacacattttcagatcatattttgtctgatgtgagactctttaaca 11682325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 276 - 408
Target Start/End: Original strand, 25258178 - 25258309
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 375  Q
    |||||||| | ||||| |||||||| |||| |||||||||| ||||||||||| ||| ||   || ||||  |||||||||||||| |||||| || | |    
T  25258178 ttaacacaccccctcatgaccagcattatttggcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatgga 25258277  T
Q  376 tcttggaggaggctctgatgccatcttagaaat 408  Q
    ||||||| || |||||||| |||||||||||||    
T  25258278 tcttgga-gaagctctgataccatcttagaaat 25258309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 276 - 408
Target Start/End: Original strand, 25321968 - 25322099
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 375  Q
    |||||||| | ||||| |||||||| |||| |||||||||| ||||||||||| ||| ||   || ||||  |||||||||||||| |||||| || | |    
T  25321968 ttaacacaccccctcatgaccagcattatttggcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatgga 25322067  T
Q  376 tcttggaggaggctctgatgccatcttagaaat 408  Q
    ||||||| || |||||||| |||||||||||||    
T  25322068 tcttgga-gaagctctgataccatcttagaaat 25322099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 287 - 406
Target Start/End: Original strand, 18333587 - 18333705
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||||| ||  ||| ||||   ||||||||||||| ||||||  | | ||||| || |||    
T  18333587 cctcacgaccagcactaatgggcttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatggatctt-gaagag 18333685  T
Q  387 gctctgatgccatcttagaa 406  Q
    |||||||| |||||||||||    
T  18333686 gctctgataccatcttagaa 18333705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 287 - 410
Target Start/End: Original strand, 32908840 - 32908962
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| |||||||||||||||| ||||||| | ||||||||||||| ||  ||| |||| |||||||||||||||  ||||| || | ||||| || |||    
T  32908840 cctcacgaccagcactattgggtttggttcgttgacataaatggtgggtgacccgatagcagaaacctgatagcagatggcccaatggatctt-gaagag 32908938  T
Q  387 gctctgatgccatcttagaaattg 410  Q
    ||||| ||  ||||||||||||||    
T  32908939 gctctaatatcatcttagaaattg 32908962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 276 - 362
Target Start/End: Original strand, 33337350 - 33337436
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 362  Q
    |||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| || |  |||||||||||||||    
T  33337350 ttaacacaccccctcatgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaa 33337436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 276 - 408
Target Start/End: Original strand, 20510754 - 20510884
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 375  Q
    |||||||| | ||||| || || |||||||||||||||||| ||||||||||||| | ||  |||||||| ||||||||||||||| || ||| |  | |    
T  20510754 ttaacacaccccctcacgatcatcactattgggcttggttcgtggacataaatgg-gggtggcccaatagcagaaacctgatagcaggtagcccagtgga 20510852  T
Q  376 tcttggaggaggctctgatgccatcttagaaat 408  Q
    ||||||| || |||||||| |||||||| ||||    
T  20510853 tcttgga-gacgctctgataccatcttaaaaat 20510884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 276 - 408
Target Start/End: Complemental strand, 24531806 - 24531675
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 375  Q
    |||||||| | ||||| |||||||||||||||||||||||| |||||||||||| || ||    | |||  ||||| ||||||||| |||||| || | |    
T  24531806 ttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatgttgggtggttcgataacagaaaactgatagcaggtggcccaatgga 24531707  T
Q  376 tcttggaggaggctctgatgccatcttagaaat 408  Q
    || | || ||||||||||| |||||||||||||    
T  24531706 tcataga-gaggctctgataccatcttagaaat 24531675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 6919323 - 6919365
Alignment:
Q  293 gaccagcactattgggcttggttcttggacataaatggtgagt 335  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  6919323 gaccagcactattgggcttggttcgtggacataaatggtgagt 6919365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 262 - 408
Target Start/End: Original strand, 26137208 - 26137353
Alignment:
Q  262 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 361  Q
    ||||||| ||||||| || ||| | ||||| ||| |||| |||||| |||||||| |||||||||||| || ||  ||| || |   |||||||||||||    
T  26137208 cgatgtgggactctt-aatacaccccctcacgactagcattattggacttggttcgtggacataaatgatgggtggcccgatggtgaaaacctgatagca 26137306  T
Q  362 agtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
     |||||| ||  |||||||||| |||||||||| ||| |||||||||    
T  26137307 ggtggcccaacaaatcttggagtaggctctgataccaccttagaaat 26137353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 16707059 - 16707123
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatc 491  Q
    ||||| ||||||||||||| | ||||  | ||||||||||||||||||||| |||||||||||||    
T  16707059 caaaaccagcttgtgaggttaggattgcccccacttataaacacatgttcaggtcatattttatc 16707123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 30770146 - 30770217
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||||||| ||||||| |||||| | |||||  |||||| |||||||||||||||| |||||||||||||||    
T  30770146 tccgatgtgggactctt-aacacaccccctcacaaccagcgctattgggcttggttcgtggacataaatggtg 30770217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 332
Target Start/End: Complemental strand, 18885447 - 18885378
Alignment:
Q  262 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||||| ||||||| |||||| |  |||| |||||||||||||||||||||||| | |||||||||||||    
T  18885447 cgatgtgggactctt-aacacaccctctcacgaccagcactattgggcttggttcatagacataaatggtg 18885378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 38731725 - 38731767
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatg 329  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  38731725 cctcacgaccagcactattgggcttggttcatggacataaatg 38731767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 435 - 512
Target Start/End: Complemental strand, 25436243 - 25436166
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    ||||||||||||| ||||| |   ||||||||||||||||||| | ||| |||| |||||||| ||| ||||||||||    
T  25436243 gcttgtgaggtgaggatttcccttacttataaacacatgttcaagccatcttttgtctgatgtcagaatctttaacaa 25436166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 408
Target Start/End: Complemental strand, 43117843 - 43117723
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||| || ||   || ||||  |||||||||||||| |||||| ||   ||||||||  ||    
T  43117843 cctcacgaccaacactattgagcttggttcgtggacataaatgatgggtggtccgatagcggaaacctgatagcaggtggcccaatagatcttgga-aag 43117745  T
Q  387 gctctgatgccatcttagaaat 408  Q
    |||||||| | |||||||||||    
T  43117744 gctctgatactatcttagaaat 43117723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 11682298 - 11682374
Alignment:
Q  254 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatgg 330  Q
    |||||||| ||||||||||||||||||| | |  |||| ||||| ||||||||| ||||||||  ||| ||||||||    
T  11682298 attttgtctgatgtgagactctttaacataccgtctcacgaccaacactattggacttggttcaaggatataaatgg 11682374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 17015973 - 17016043
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||||||| ||||||| |||||| | ||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  17015973 tccgatgtgggactctt-aacacaac-cctcacgaccaacactattggacttggttcgtggacataaatggtg 17016043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 299 - 361
Target Start/End: Original strand, 16704618 - 16704680
Alignment:
Q  299 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 361  Q
    |||||||||||||||||| |||||||||||| |||||  ||| ||||  ||||| ||||||||    
T  16704618 cactattgggcttggttcgtggacataaatgatgagtgacccgatagctgaaacatgatagca 16704680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 415 - 512
Target Start/End: Original strand, 17899481 - 17899579
Alignment:
Q  415 taactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    |||||||||||  ||||||| |||  |||||||| ||||  | ||||||||||||||||||||| | |||||||| || |||||  ||||||| |||||    
T  17899481 taactcatcctcacaaaatcggctcatgaggtgaggattgcccccacttataaacacatgttcaggccatattttgtcggatgtatgactcttcaacaa 17899579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 24528759 - 24528694
Alignment:
Q  263 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatg 329  Q
    |||||| ||||||| |||||| | ||||| ||| ||||||||| |||||||||| ||||||||||||    
T  24528759 gatgtgggactctt-aacacaccccctcatgacaagcactattaggcttggttcgtggacataaatg 24528694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 30073630 - 30073556
Alignment:
Q  39 gattcagaataatgtgaatcgaatcaaggacttggaaaagaggttttgtcattcaacaaagaagattttcacaca 113  Q
    |||||| |||| | ||||||||||||||||| ||||||| || ||||| || |||| || |||| ||||||||||    
T  30073630 gattcaaaatattttgaatcgaatcaaggacctggaaaaaagtttttgccactcaaaaatgaaggttttcacaca 30073556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 408
Target Start/End: Original strand, 17150368 - 17150476
Alignment:
Q  299 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 398  Q
    |||||||||  ||||||  ||||||||||||||| ||  ||| ||||  |||||||||||| | |||||| || | ||||| || ||||||||||| |||    
T  17150368 cactattggtattggtttctggacataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaatggatctt-gaagaggctctgatacca 17150466  T
Q  399 tcttagaaat 408  Q
    ||||| ||||    
T  17150467 tcttaaaaat 17150476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 472
Target Start/End: Original strand, 37782084 - 37782129
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacat 472  Q
    ||||| ||||||||||||||||||||  | ||||||||||||||||    
T  37782084 caaaaccagcttgtgaggtgatgattgcccccacttataaacacat 37782129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 42490628 - 42490575
Alignment:
Q  458 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||||||| ||||| |||||||||||| | ||||||  ||||||||||||    
T  42490628 cacttataaacatatgtttatgtcatattttgtttgatgtatgactctttaaca 42490575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 9e-32; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 258 - 408
Target Start/End: Original strand, 4868672 - 4868821
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| |||   ||||||||||    
T  4868672 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgat 4868770  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||| |||||| |  | |||||||||||||||||||| |||||||||||||    
T  4868771 agcaggtggcccagcggatcttggaggaggctctgataccatcttagaaat 4868821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 258 - 408
Target Start/End: Complemental strand, 13353425 - 13353277
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||    
T  13353425 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgat 13353327  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  13353326 aacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 13353277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 258 - 408
Target Start/End: Complemental strand, 33796550 - 33796402
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||    
T  33796550 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgat 33796452  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  33796451 aacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 33796402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 260 - 408
Target Start/End: Complemental strand, 9705241 - 9705096
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| ||||||||||||||| |||||||  ||||||||||||||| ||  ||| |||   ||||||||||||    
T  9705241 tccgatgtgggactctt-aacacaccccctcacgaccagcactattggacttggtt--tggacataaatggtgggtggcccgataatggaaacctgatag 9705145  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||||| ||  ||||||||||||||||||||| |||||||||||||    
T  9705144 caggtggcccaacaaatcttggaggaggctctgataccatcttagaaat 9705096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 12330041 - 12330187
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| ||||||||  |||||||||||||| ||||||||||||||| ||  ||| || |  ||||||||||||    
T  12330041 tccgatgtgggactctt-aacacaccccctcacgaccagcataattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatag 12330139  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||||| || | |||||||| ||||||||||| |||| ||||||||    
T  12330140 caggtggcccaatggatcttgga-gaggctctgataccatattagaaat 12330187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 258 - 361
Target Start/End: Original strand, 6400715 - 6400817
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||||||||||| |||||  | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   || |||| |||||||||||    
T  6400715 tgtccgatgtgagactctt-aacaccccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcagaaacctgat 6400813  T
Q  358 agca 361  Q
    ||||    
T  6400814 agca 6400817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 260 - 399
Target Start/End: Original strand, 17147757 - 17147894
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | |||||  ||||||||||||||||||||||| ||||||||||||||| ||  ||  ||||  ||||||||||||    
T  17147757 tccgatgtgggactctt-aacacaccccctcacaaccagcactattgggcttggttcgtggacataaatggtgggtgacctgatagcggaaacctgatag 17147855  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccat 399  Q
    || ||| || || | || ||||| ||||||||||| ||||    
T  17147856 caggtgacccaatggatgttgga-gaggctctgataccat 17147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 428 - 512
Target Start/End: Complemental strand, 3823353 - 3823269
Alignment:
Q  428 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    |||||||| |||||| ||||||||| || ||||||||||||| ||  ||| ||||| | ||||| ||||||||||||||||||||    
T  3823353 aaaatcagtttgtgatgtgatgattgtccccacttataaacaaattatcaggtcatctcttatccgatgtgagactctttaacaa 3823269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 6542805 - 6542951
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||||||||||| ||||||   ||||| ||||| |  |||||| |||||||| ||||||||||||||| ||  ||| |||   ||||||||||||    
T  6542805 tccgatgtgagactctt-aacacacaccctcacgaccaacgatattggacttggttcgtggacataaatggtgggtgacccgataacggaaacctgatag 6542903  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||||| || || | ||||| || ||||||||||| ||||||| |||||    
T  6542904 caagtgacccaatggatctt-gaagaggctctgataccatctttgaaat 6542951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 260 - 408
Target Start/End: Complemental strand, 33494761 - 33494615
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| |  |||| |||||||||||||||||||||||| || ||||||| |||| ||  ||| ||||  ||||||||||||    
T  33494761 tccgatgtgggactctt-aacacaccaactcacgaccagcactattgggcttggttcgtgaacataaacggtgggtggcccgatagtggaaacctgatag 33494663  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || ||| || || | ||| | || |||| |||||| |||||||||||||    
T  33494662 caggtgacccaatggatc-tcgaagaggttctgataccatcttagaaat 33494615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 278 - 358
Target Start/End: Original strand, 33631684 - 33631764
Alignment:
Q  278 aacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgata 358  Q
    |||||| | ||||| |||||||||||||| ||||||||  ||||||||||||||| || |||| |||| ||||||||||||    
T  33631684 aacacatcccctcacgaccagcactattgagcttggttagtggacataaatggtgggtgtcccgatagcagaaacctgata 33631764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 263 - 394
Target Start/End: Complemental strand, 31961162 - 31961033
Alignment:
Q  263 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 362  Q
    |||||| ||||||| |||||| | ||||| ||| || ||||||||||||||| | ||||||||||||||| |   | | |||| |||||||||||||||     
T  31961162 gatgtgggactctt-aacacatcccctcacgactagtactattgggcttggtccgtggacataaatggtggggggcacgatagcagaaacctgatagcag 31961064  T
Q  363 gtggccaaaagaatcttggaggaggctctgat 394  Q
    |||||| || | |||||||| |||||||||||    
T  31961063 gtggcccaatggatcttgga-gaggctctgat 31961033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 421 - 511
Target Start/End: Original strand, 30711244 - 30711336
Alignment:
Q  421 atccttcaaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcata--ttttatctgatgtgagactctttaaca 511  Q
    ||||| ||||||| | ||||||||||| |||| |||| ||||||||||||||||||||| ||||  |||| ||||||||   |||||||||||    
T  30711244 atcctacaaaatcggtttgtgaggtgaggattgtctctacttataaacacatgttcatgacatatcttttgtctgatgtagaactctttaaca 30711336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 427 - 506
Target Start/End: Original strand, 12329978 - 12330057
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 506  Q
    ||||||||||||||||||||| ||||  | ||||||||||||||||  | || |||||| ||||| |||||| |||||||    
T  12329978 caaaatcagcttgtgaggtgaggattgcccccacttataaacacattgttatatcatatcttatccgatgtgggactctt 12330057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 511
Target Start/End: Original strand, 27993473 - 27993523
Alignment:
Q  461 ttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||||||||| |||| |||||||| ||| ||||||||||||||||||    
T  27993473 ttataaacacatgtccatgccatattttgtctaatgtgagactctttaaca 27993523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 6312042 - 6311989
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattggg 308  Q
    ||||||||||||||||||||||||||||| | |||||  || ||||||||||||    
T  6312042 ttttgtccgatgtgagactctttaacacatcccctcacaacaagcactattggg 6311989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 511
Target Start/End: Complemental strand, 20830800 - 20830715
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttat-aaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||| ||||||||||||||||  | |||||||| ||||||||||| |  |||| |||| || ||||| |||||||||||||    
T  20830800 caaaatcagtttgtgaggtgatgattgcccccacttataaaacacatgtttagatcatcttttgtccgatgtaagactctttaaca 20830715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 512
Target Start/End: Complemental strand, 2297731 - 2297676
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    ||||||||||||||||  |||| ||||||||| || |||||||||||||| |||||    
T  2297731 ccacttataaacacatactcatatcatattttgtccgatgtgagactcttcaacaa 2297676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 287 - 410
Target Start/End: Complemental strand, 3680208 - 3680086
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||  |  ||| ||||  ||||||| |||||| ||| ||  | | || ||||| |||    
T  3680208 cctcacgaccaacactattgggcttggtttgtggacataaatggtggatgacccgatagcggaaacctaatagcaggtgacccgatggattttgga-gag 3680110  T
Q  387 gctctgatgccatcttagaaattg 410  Q
    | |||||| |||||||||||||||    
T  3680109 ggtctgataccatcttagaaattg 3680086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 329
Target Start/End: Original strand, 7638693 - 7638755
Alignment:
Q  266 gtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatg 329  Q
    ||||||||||| |||||||| | ||| ||| |||||||||||||||||||| | ||||||||||    
T  7638693 gtgagactctt-aacacagcccatcacgactagcactattgggcttggttcgtagacataaatg 7638755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 508
Target Start/End: Original strand, 12319738 - 12319789
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgatgtgagactcttta 508  Q
    ||||||||||||||||  ||||||||| | |||||| |||||||||||||||    
T  12319738 ccacttataaacacattgtcatgtcatctcttatctaatgtgagactcttta 12319789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 512
Target Start/End: Original strand, 31996877 - 31996932
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    ||||||||||||||||| ||||| ||| |||||||  ||||| |||||||||||||    
T  31996877 ccacttataaacacatggtcatgacatcttttatcctatgtgtgactctttaacaa 31996932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 415 - 472
Target Start/End: Complemental strand, 3921858 - 3921800
Alignment:
Q  415 taactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacat 472  Q
    |||||||||||| || ||||||||| ||| |||| ||||||| ||||||||||||||||    
T  3921858 taactcatccttacagaatcagcttatgacgtgaggattttccccacttataaacacat 3921800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 8001498 - 8001560
Alignment:
Q  348 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    |||||||||||||| |||||| || | |||||  ||||| ||||||| |||||||||||||||    
T  8001498 gaaacctgatagcaggtggcccaacggatctttaaggagactctgataccatcttagaaattg 8001560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 20830741 - 20830667
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatg 329  Q
    ||||||||||||| ||||||||||||| |    |||| |||||| | ||||||||||||||| |||| |||||||    
T  20830741 ttttgtccgatgtaagactctttaacatacactctcacgaccagtattattgggcttggttcgtggaaataaatg 20830667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 260 - 330
Target Start/End: Complemental strand, 30256800 - 30256730
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatgg 330  Q
    ||||||||| ||||||| |||||| | | ||| ||||| |||| |||||||| |||| |||||||||||||    
T  30256800 tccgatgtgggactcttaaacacaccccatcacgaccaacactgttgggcttagttcgtggacataaatgg 30256730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 511
Target Start/End: Complemental strand, 30392722 - 30392668
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||||||||||||||||||| || |||| | || ||||||||| |||||||    
T  30392722 ccacttataaacacatgttcatgttatcttttgtgtgttgtgagactttttaaca 30392668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 3823437 - 3823380
Alignment:
Q  348 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttaga 405  Q
    ||||||||||| |||||| |  || | |||||||||||||||||||| ||||||||||    
T  3823437 gaaacctgatatcaagtgtctcaacggatcttggaggaggctctgataccatcttaga 3823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 512
Target Start/End: Original strand, 34847061 - 34847111
Alignment:
Q  460 cttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    |||||||||||||||||||| || ||||||||| |  ||||||||||||||||    
T  34847061 cttataaacacatgttcatgccacattttatctca--tgagactctttaacaa 34847111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 258 - 408
Target Start/End: Original strand, 14466270 - 14466418
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    |||||||||||  |||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||    
T  14466270 tgtccgatgtggaactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgat 14466368  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    | ||||||||| || | |||||||| ||||||||||| |||||||||||||    
T  14466369 aacaagtggcccaatggatcttgga-gaggctctgataccatcttagaaat 14466418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 5711536 - 5711683
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| |||   ||||||||||||    
T  5711536 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatag 5711634  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||| | || | |||||||||||||||||||| | |||||||||||    
T  5711635 caggtggtccaacggatcttggaggaggctctgatactatcttagaaat 5711683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 260 - 506
Target Start/End: Original strand, 37812365 - 37812611
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||||| ||||||||||||||| ||||||||||  ||| ||  ||| |||| |||||||||||||    
T  37812365 tccgatgtgggactctt-aacacaccccctcacgaccagcattattgggcttggttcgtggacataaacagtgggtggcccgatagcagaaacctgatag 37812463  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt-gagcataactcatcctt-caaaatcagcttgtgaggtgatgattttctc 457  Q
    || |||||| || | |||||||| ||||||| ||| |||| ||  || || | || |||||||||||| |||||||  |||||||||||| ||||  | |    
T  37812464 caggtggcccaatggatcttgga-gaggctccgataccatgttgtaatttggggcctaactcatccttacaaaatcgacttgtgaggtgaggattgcccc 37812562  T
Q  458 cacttataaacacatgttcatgtcatattttatctgatgtgagactctt 506  Q
    |||||||||||||||  ||| ||||| | ||||| |||||| |||||||    
T  37812563 cacttataaacacattgtcaggtcatgtcttatccgatgtgggactctt 37812611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 258 - 408
Target Start/End: Complemental strand, 2029993 - 2029845
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   || ||||  ||||||| ||    
T  2029993 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctaat 2029895  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||| |||||| || | |||||||| ||||||||||| |||||||||||||    
T  2029894 agcaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 2029845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 260 - 408
Target Start/End: Complemental strand, 16419489 - 16419343
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||| ||||||||| ||||||||||||||| ||  | | ||||  ||||||||||||    
T  16419489 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggctcgatagcggaaacctgatag 16419391  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  16419390 caggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 16419343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 40379306 - 40379452
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| ||||||| |||||||||| ||||||||||||| |||| |||||||||| ||  ||| ||||  ||||||||||||    
T  40379306 tccgatgtgggactctt-aacacacctcctcacgaccagcacttttgggcttggttcgtggatataaatggtgggtggcccgatagaggaaacctgatag 40379404  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||||| || | ||||||||  |||||||||| |||||||||||||    
T  40379405 caggtggcctaatggatcttgga-aaggctctgataccatcttagaaat 40379452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 255 - 408
Target Start/End: Original strand, 33381044 - 33381199
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagt--ttcccaataggagaaac 352  Q
    ||||||| |||||  | |||||||||||| ||||||| ||||||||||| |||| ||||||| |||||||||||| || ||   ||   |||| ||||||    
T  33381044 ttttgtctgatgtaggtctctttaacacatctcctcacgaccagcactactgggtttggttcgtggacataaatgatgggtgactcgagatagcagaaac 33381143  T
Q  353 ctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    ||| ||||| |||||| || |||||||| ||||| |||| || |||||||||||||    
T  33381144 ctgttagcatgtggcctaatgaatcttgaaggagactctaataccatcttagaaat 33381199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 260 - 410
Target Start/End: Original strand, 40149100 - 40149246
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||||||||||| |||||| |  |||| |||||||||||||||||||||||| ||||||||||| ||| ||   || ||||  |||| |||||||    
T  40149100 tccgatgtgagactctt-aacacacc--ctcacgaccagcactattgggcttggttcgtggacataaatagtgggtggtccgatagctgaaatctgatag 40149196  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    || ||| || || | ||||| || ||||||||||| |||||||||||||||    
T  40149197 caggtgacccaatggatctt-gaagaggctctgataccatcttagaaattg 40149246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 17525194 - 17525303
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    |||||||||||||||| ||||||||| |  |||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||| ||||  || |||||||    
T  17525194 tgtccgatgtgagact-tttaacacacccactcacgaccatcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggatacctgat 17525292  T
Q  358 agcaagtggcc 368  Q
    |||| ||||||    
T  17525293 agcaggtggcc 17525303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 252
Target Start/End: Complemental strand, 27487691 - 27487560
Alignment:
Q  122 acacaatgcgacaatgattgttatgtgctttagcatgttctaggctttaactaaaact-atttaaacatcatcaaagaaatctagataatgaacatcatt 220  Q
    |||||||| |||||| |||| || ||| |||| | ||||| | | ||||||||||||| ||||||| |||||||||| ||| ||  |||| ||||||||     
T  27487691 acacaatgagacaataattgctaggtgttttaacttgttccatgttttaactaaaacttatttaaatatcatcaaaggaatttacctaataaacatcatc 27487592  T
Q  221 aaaatacaatcctagcactataagcaacttca 252  Q
    |||| |||| |||| |||||||||||||||||    
T  27487591 aaaacacaagcctaacactataagcaacttca 27487560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 435 - 514
Target Start/End: Original strand, 30006621 - 30006700
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaaat 514  Q
    ||||||| |||||||||| || ||||||||||||||||||||||| |||||||| |  || ||||||||||| |||||||    
T  30006621 gcttgtgtggtgatgattatccccacttataaacacatgttcatgccatattttgttcgacgtgagactcttcaacaaat 30006700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 13250127 - 13250212
Alignment:
Q  269 agactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 354  Q
    ||||||||||||||| | ||||| ||||| ||||||||||| || ||| ||||||||||||||| ||  |||||||| ||||||||    
T  13250127 agactctttaacacatcccctcacgaccatcactattgggcatgcttcgtggacataaatggtgggtgccccaatagcagaaacct 13250212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 394
Target Start/End: Original strand, 18607142 - 18607238
Alignment:
Q  297 agcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgat 394  Q
    |||||||||||||||||||| | ||||||||||||| ||| ||| |||   |||||||||||||| |||||| || | |||||||| |||||||||||    
T  18607142 agcactattgggcttggttcgtagacataaatggtgggttgcccgataacggaaacctgatagcatgtggcccaatggatcttgga-gaggctctgat 18607238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 299 - 408
Target Start/End: Original strand, 21383569 - 21383678
Alignment:
Q  299 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 398  Q
    |||||||  ||||||| | |||| |||||| ||| ||  |||||||| |||||| |||||||| |||||| ||   |||||||||||||||||||| |||    
T  21383569 cactattaagcttggtgcctggatataaattgtgggtgacccaatagcagaaacttgatagcaggtggcccaacagatcttggaggaggctctgatacca 21383668  T
Q  399 tcttagaaat 408  Q
    ||||||||||    
T  21383669 tcttagaaat 21383678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 365
Target Start/End: Original strand, 33606151 - 33606255
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| ||||| ||||||| |||||||||| ||||||||||||||| ||  ||  ||||  ||||||||||||    
T  33606151 tccgatgtgggactctt-aacacaccacctcacgaccatcactattaggcttggttcgtggacataaatggtgggtggcctgatagcggaaacctgatag 33606249  T
Q  360 caagtg 365  Q
    ||||||    
T  33606250 caagtg 33606255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 15124645 - 15124791
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | |||||  |||||||||||||| |||||||| |||||||||||||||  |  ||| |||    |||||||||||    
T  15124645 tccgatgtgggactctt-aacacatcccctcacaaccagcactattggacttggttcgtggacataaatggtggatgacccgataacgaaaacctgatag 15124743  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||| | || | |||||||| ||| ||||||| |||||||||||||    
T  15124744 caggtggtccaatggatcttgga-gagactctgataccatcttagaaat 15124791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 293 - 408
Target Start/End: Original strand, 93248 - 93362
Alignment:
Q  293 gaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctg 392  Q
    |||||||||||||||||||| ||| ||||||||| ||||| ||  ||| |||   |||| ||||||||| |||||| || | |||||||| |||||||||    
T  93248 gaccagcactattgggcttgattcgtggacataattggtgggtggcccgataacggaaagctgatagcaggtggcccaatggatcttgga-gaggctctg 93346  T
Q  393 atgccatcttagaaat 408  Q
    || |||||||| ||||    
T  93347 ataccatcttaaaaat 93362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 435 - 514
Target Start/End: Original strand, 30063309 - 30063388
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaaat 514  Q
    ||||||| |||||||||| || ||||||||||||||||||||||| |||||||| |  || |||||| |||| |||||||    
T  30063309 gcttgtgtggtgatgattatccccacttataaacacatgttcatgccatattttgttcgacgtgagaatcttaaacaaat 30063388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 406
Target Start/End: Complemental strand, 13210745 - 13210604
Alignment:
Q  264 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaag 363  Q
    ||||| |||||||||||||| | ||||| | ||| |||||||| |||||||   |||   ||||||||| ||| ||| ||||  |||| ||||||||| |    
T  13210745 atgtgggactctttaacacaccccctcacg-ccaacactattgagcttggtgtgtgggtgtaaatggtgggttgcccgatagaggaaatctgatagcatg 13210647  T
Q  364 tggccaaaagaatcttggaggaggctctgatgccatcttagaa 406  Q
    ||||| || | |||||||||||| ||||||| |||||||||||    
T  13210646 tggcccaatggatcttggaggagtctctgataccatcttagaa 13210604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 288 - 406
Target Start/End: Complemental strand, 16533507 - 16533390
Alignment:
Q  288 ctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggagg 387  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||| ||  ||| ||||   ||||||||||||| || ||| || | ||||| || ||||    
T  16533507 ctcacgaccagcactattggccttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtagcccaatggatctt-gaagagg 16533409  T
Q  388 ctctgatgccatcttagaa 406  Q
    ||||||| |||| ||||||    
T  16533408 ctctgataccattttagaa 16533390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 309 - 410
Target Start/End: Complemental strand, 17719574 - 17719474
Alignment:
Q  309 cttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||||||| |||||||||||||||  |  ||  ||||| |||||||||||||| ||||||||| | |||||||| ||| || |||| |||||||||||||    
T  17719574 cttggttcgtggacataaatggtggatggccggataggggaaacctgatagcaggtggccaaatggatcttgga-gagactttgataccatcttagaaat 17719476  T
Q  409 tg 410  Q
    ||    
T  17719475 tg 17719474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 511
Target Start/End: Complemental strand, 15988255 - 15988179
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||| ||||| | ||||||||||| |||||| || | |||||||| ||||||||| ||||||| ||||    
T  15988255 gcttgtgaggtgaggatttcccccacttataaaaacatgtacaggccatattttgtctgatgtgggactcttaaaca 15988179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 41069335 - 41069255
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagt 335  Q
    ||||||| |||| | ||||||||||||||   ||||| |||||| ||||||| ||||||||| |||||||||||| |||||    
T  41069335 ttttgtctgatgcgggactctttaacacactccctcacgaccagtactattgagcttggttcgtggacataaatgatgagt 41069255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 511
Target Start/End: Original strand, 43819441 - 43819489
Alignment:
Q  463 ataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||||||||||||| || |||| ||||||||||||||||||||||    
T  43819441 ataaacacatgttcatgttattttttgtctgatgtgagactctttaaca 43819489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 296 - 407
Target Start/End: Complemental strand, 19110430 - 19110319
Alignment:
Q  296 cagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatg 395  Q
    ||||||||||| ||||||||| ||| |||||||| ||| |  ||| |||| | |||||| |||||| ||| || || | ||||||||| ||||| ||||     
T  19110430 cagcactattgagcttggttcgtgggcataaatgatgaatggcccgatagcaaaaacctaatagcaggtgacccaacggatcttggagtaggctttgata 19110331  T
Q  396 ccatcttagaaa 407  Q
    ||||||||||||    
T  19110330 ccatcttagaaa 19110319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 509
Target Start/End: Original strand, 7209092 - 7209142
Alignment:
Q  459 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 509  Q
    ||||||||| ||||||||||||  |||||| ||||||||||||||||||||    
T  7209092 acttataaatacatgttcatgttgtattttgtctgatgtgagactctttaa 7209142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 504
Target Start/End: Complemental strand, 7748249 - 7748204
Alignment:
Q  459 acttataaacacatgttcatgtcatattttatctgatgtgagactc 504  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||    
T  7748249 acttataaacacatgtctatgtcatattttgtctgatgtgagactc 7748204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 512
Target Start/End: Original strand, 13250304 - 13250376
Alignment:
Q  440 tgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    ||| |||| |||| ||| || |||||||||||||||||    || ||||||||||||||||||||||||||||    
T  13250304 tgatgtgaggattgtctgcatttataaacacatgttcaaacaatcttttatctgatgtgagactctttaacaa 13250376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 511
Target Start/End: Original strand, 19571008 - 19571092
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||  ||| |||||||| ||||  | |||||||||||||||||||||  ||||  ||| || |||||||||||||||||||    
T  19571008 caaaatcgacttatgaggtgaggattgcccccacttataaacacatgttcagttcattatttgtccgatgtgagactctttaaca 19571092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 506
Target Start/End: Original strand, 40149037 - 40149116
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacaca-tgttcatgtcatattttatctgatgtgagactctt 506  Q
    ||||||| ||||||||||||| |||| || ||||||||||||||| |||| | ||||| || |||| ||||||||||||||    
T  40149037 caaaatcggcttgtgaggtgaggattgtccccacttataaacacactgtt-aggtcatcttctatccgatgtgagactctt 40149116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 276 - 383
Target Start/End: Original strand, 44404038 - 44404146
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaatagg-agaaacctgatagcaagtggccaaaaga 374  Q
    |||||||| | | ||| ||||| |||||||||||||||||| ||||||||||| ||| ||  ||| |||||  |||||||||||||| |||| | || |     
T  44404038 ttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatgg 44404137  T
Q  375 atcttggag 383  Q
    |||||||||    
T  44404138 atcttggag 44404146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 510
Target Start/End: Original strand, 11099669 - 11099720
Alignment:
Q  459 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaac 510  Q
    ||||||||||||||  ||| ||||| | ||||||||||||||||||||||||    
T  11099669 acttataaacacattgtcaggtcatctcttatctgatgtgagactctttaac 11099720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 38629882 - 38629807
Alignment:
Q  436 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||| ||| |||| || | ||||||||| ||||  ||||||||| | ||||| |||||||||||||||||||    
T  38629882 cttgtgagatgaggattgtcccaacttataaatacattgtcatgtcatttcttatccgatgtgagactctttaaca 38629807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 255 - 389
Target Start/End: Original strand, 21383381 - 21383515
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 354  Q
    |||| ||||||| | |||||||||||||| | |||||   ||| |||||||| ||||||| | |||| ||||||  || ||  ||||||||  |||||||    
T  21383381 ttttatccgatgcgggactctttaacacaccccctcacacccaccactattgtgcttggtgcgtggatataaataatgggtggcccaatagcggaaacct 21383480  T
Q  355 gatagcaagtggccaaaagaatcttggaggaggct 389  Q
    ||||||| ||||||  |   |||||||||||||||    
T  21383481 gatagcaggtggcctgacagatcttggaggaggct 21383515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 415 - 472
Target Start/End: Original strand, 37812289 - 37812347
Alignment:
Q  415 taactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacat 472  Q
    |||||||||||| |||||||  |||||||||||| |||| || ||||||||||||||||    
T  37812289 taactcatccttacaaaatcgacttgtgaggtgaggattgtccccacttataaacacat 37812347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 37828368 - 37828445
Alignment:
Q  254 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    |||||||||||||||||||| ||||||||| || || | | ||||| |||||||| |||||||  ||||| ||||||||    
T  37828368 attttgtccgatgtgagactatttaacacatct-ctaacggccagctctattgggtttggttcgcggacacaaatggtg 37828445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 264 - 408
Target Start/End: Complemental strand, 42895467 - 42895323
Alignment:
Q  264 atgtgagactctttaacaca-gctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 362  Q
    |||||||||||||||||||| |||| ||| ||||| ||||||| || |||||||  |||||||||||||| ||  ||| ||||  ||||| ||||| ||     
T  42895467 atgtgagactctttaacacacgctc-tcacgaccaacactattaggtttggttcagggacataaatggtgggtcgcccgatagcggaaacttgatatcag 42895369  T
Q  363 gtgg-ccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||| || || | ||||| || ||||||||||| ||||| |||||||    
T  42895368 gtggccctaatggatcttaga-gaggctctgataccatcatagaaat 42895323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 30002032 - 30001979
Alignment:
Q  458 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||   |||||||| |||||| |||||| ||||||||||||||||||    
T  30002032 cacttataaatttatgttcatatcatatcttatcttatgtgagactctttaaca 30001979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 472
Target Start/End: Complemental strand, 37840379 - 37840342
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacat 472  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  37840379 gcttgtgaggtgatgattgcctccacttataaacacat 37840342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 512
Target Start/End: Complemental strand, 38580929 - 38580876
Alignment:
Q  459 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    |||||||||||| | |||| ||||| ||||||| ||||||| ||||||||||||    
T  38580929 acttataaacacgtattcaagtcattttttatccgatgtgaaactctttaacaa 38580876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 9e-29; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 254 - 511
Target Start/End: Original strand, 13574775 - 13575039
Alignment:
Q  254 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacc 353  Q
    ||||||||||||||| ||||||||||||||   ||||| ||| |||||||||||||||||||| ||||||||||||||| ||  | | ||||  ||||||    
T  13574775 attttgtccgatgtgggactctttaacacactccctcacgactagcactattgggcttggttcgtggacataaatggtgggtgacacgatagcggaaacc 13574874  T
Q  354 tgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaa------ttgagcataactc-atccttcaaaatcagcttgtgaggtg 446  Q
    |||||||| |||||| || | |||||    |||||| |||| |||| |||||||      ||| || |||| | | ||  |||||   ||||||||||||    
T  13574875 tgatagcaggtggcccaatggatcttaactgaggctttgataccatattagaaattgtggttgggcctaacacaaccccacaaaactggcttgtgaggtg 13574974  T
Q  447 atgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    | ||||| | |||||||||||||||||| |||| |||||||| || |||||| ||||||||||||    
T  13574975 aggatttcccccacttataaacacatgtccatgccatattttgtccgatgtgggactctttaaca 13575039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 276 - 408
Target Start/End: Complemental strand, 16239799 - 16239667
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 375  Q
    |||||||| | ||||| ||||| |||||||| ||||||||| ||||||||||||||| ||  | | |||   |||||||||||||| ||||||||| | |    
T  16239799 ttaacacaccccctcacgaccatcactattgagcttggttcgtggacataaatggtgggtggctcgataacggaaacctgatagcaggtggccaaacgga 16239700  T
Q  376 tcttggaggaggctctgatgccatcttagaaat 408  Q
    ||||||||||||||||||| |||||||||||||    
T  16239699 tcttggaggaggctctgataccatcttagaaat 16239667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 4155544 - 4155400
Alignment:
Q  262 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 361  Q
    ||||||| ||||||| |||||| |  |||| |||||||||||||||||||||||| | |||||||| |||| ||  ||| ||||  ||||||||||||||    
T  4155544 cgatgtgggactctt-aacacaccctctcacgaccagcactattgggcttggttcgtcgacataaacggtgggtggcccgatagcggaaacctgatagca 4155446  T
Q  362 agtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
     |||||| || |||||||||| ||| ||||||| |||||||||||||    
T  4155445 ggtggcccaatgaatcttgga-gagactctgataccatcttagaaat 4155400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 260 - 424
Target Start/End: Complemental strand, 34992828 - 34992666
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| | ||  ||||||||||||    
T  34992828 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgacccgacagcggaaacctgatag 34992730  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattgagcataactcatcc 424  Q
    || |||||| || | | |||||| ||| ||||||| |||||||| || | | || ||||||||||    
T  34992729 caggtggcccaatggaccttgga-gagactctgataccatcttaaaattggggcctaactcatcc 34992666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 260 - 406
Target Start/End: Original strand, 35038291 - 35038434
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||| ||||||||||||||||| ||||||||||||||| | |  || ||||  |||||||||| |    
T  35038291 tccgatgtgggactctt-aacacaccccctcacgaccagtactattgggcttggttcgtggacataaatggtg-ggtggccgatagcggaaacctgattg 35038388  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaa 406  Q
    || |||||| || | |||||||| ||||| ||||| |||||||||||    
T  35038389 caggtggcccaatggatcttgga-gaggcactgataccatcttagaa 35038434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 260 - 357
Target Start/End: Original strand, 39683365 - 39683461
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||| ||||||| |||||||  ||||| |||||||| ||||||||||||||| ||||||||||||||| ||  ||| |||| |||||||||||    
T  39683365 tccgatgtgggactctt-aacacagtccctcacgaccagcattattgggcttggttcgtggacataaatggtgggtggcccgatagcagaaacctgat 39683461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 299 - 403
Target Start/End: Complemental strand, 31151028 - 31150924
Alignment:
Q  299 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 398  Q
    |||||||||||||||| | || | |||||||||||||  ||| |||   ||||||| ||||||||||||| || | |||||||||||||||||||| |||    
T  31151028 cactattgggcttggtgcatgtatataaatggtgagtgacccgataacggaaacctaatagcaagtggcccaacggatcttggaggaggctctgatacca 31150929  T
Q  399 tctta 403  Q
    |||||    
T  31150928 tctta 31150924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 255 - 406
Target Start/End: Original strand, 22775490 - 22775641
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 354  Q
    |||| ||| ||||| ||||| | |||||| | ||||| | ||| |||||||||| ||||| | |||| |||||||||| ||  ||| |||| ||||||||    
T  22775490 ttttatccaatgtgggactcctaaacacaccacctcatgcccaacactattgggattggtgcatggatataaatggtgggtggcccgatagcagaaacct 22775589  T
Q  355 gatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaa 406  Q
     |||||| |||||| ||   |||||| ||||||||||||| |||||||||||    
T  22775590 aatagcaggtggcccaatagatcttgaaggaggctctgataccatcttagaa 22775641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 288 - 368
Target Start/End: Original strand, 20327738 - 20327818
Alignment:
Q  288 ctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggcc 368  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||| ||||  |||||||||||||| ||||||    
T  20327738 ctcacgaccaacactattgggcttggttcctggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcc 20327818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 427 - 483
Target Start/End: Complemental strand, 31317516 - 31317460
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcat 483  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  31317516 caaaatcggcttgtgaggtgatgattttccccacttataaacacattgtcatgtcat 31317460  T

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Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 293 - 410
Target Start/End: Original strand, 20303279 - 20303395
Alignment:
Q  293 gaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctg 392  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||   || ||||  |||||||||||||| |||||| || | || || || |||||||||    
T  20303279 gaccaacactattggacttggttcgtggacataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggattttaga-gaggctctg 20303377  T
Q  393 atgccatcttagaaattg 410  Q
    || |||| ||||||||||    
T  20303378 ataccatattagaaattg 20303395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 30179751 - 30179827
Alignment:
Q  436 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    |||||||||||| ||||  | ||||||||||||||||  ||| ||||| | |||||||||||| |||||||||||||    
T  30179751 cttgtgaggtgaggattacccccacttataaacacattgtcaggtcatctcttatctgatgtgggactctttaacaa 30179827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 465 - 511
Target Start/End: Complemental strand, 26916408 - 26916362
Alignment:
Q  465 aaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  26916408 aaacacaagttcatgtcatcttttatctgttgtgagactctttaaca 26916362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 511
Target Start/End: Complemental strand, 41915211 - 41915137
Alignment:
Q  437 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||| ||||  | ||||||||||||||||||||||||||| | || ||  ||||| ||||||||||||    
T  41915211 ttgtgaggtgaggattgcccccacttataaacacatgttcatgtcatctcttttccaatgtgggactctttaaca 41915137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 255 - 410
Target Start/End: Complemental strand, 45828238 - 45828093
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 354  Q
    |||||||||||||| |||||||||||||| | ||||| ||||||| ||||||||         ||||||||||||||| ||  | | ||||  |||||||    
T  45828238 ttttgtccgatgtgggactctttaacacaccccctcacgaccagc-ctattggg--------gtggacataaatggtgggtggctcgatagcggaaacct 45828148  T
Q  355 gatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    | ||||| |||||  || | |||||||| ||||||||||| |||||||||||||||    
T  45828147 ggtagcaggtggcgcaatggatcttgga-gaggctctgataccatcttagaaattg 45828093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 498
Target Start/End: Original strand, 8487553 - 8487617
Alignment:
Q  433 cagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtg 498  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||| ||| |||| ||| |||||    
T  8487553 cagcttgtgaggtgaggattgtc-ccacttataaacacatgttcatgccatcttttgtctcatgtg 8487617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 408
Target Start/End: Original strand, 12930075 - 12930136
Alignment:
Q  347 agaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    ||||||||||||||| |||||| || | ||| ||||||||||| |||| |||||||||||||    
T  12930075 agaaacctgatagcaggtggcccaacggatcatggaggaggctttgataccatcttagaaat 12930136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 19954340 - 19954385
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||||    
T  19954340 cctcacgaccagtactattgggcttggttcgtggacataaatggtg 19954385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 506
Target Start/End: Complemental strand, 21387375 - 21387326
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 506  Q
    ||||||||||||| ||||||||||||| |||||||||| ||| |||||||    
T  21387375 ccacttataaacatatgttcatgtcatcttttatctgaagtgggactctt 21387326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 31317438 - 31317382
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    |||||||| | ||||| |||||||||||||| | ||||||| |||||||||||||||    
T  31317438 ttaacacaccccctcacgaccagcactattgagtttggttcgtggacataaatggtg 31317382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 511
Target Start/End: Complemental strand, 45828288 - 45828212
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||  ||||  | ||||||||||||||||||||| | ||| |||| || |||||| ||||||||||||    
T  45828288 gcttgtgaggtggagattgcccccacttataaacacatgttcaggccatcttttgtccgatgtgggactctttaaca 45828212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 383
Target Start/End: Complemental strand, 46139446 - 46139362
Alignment:
Q  299 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggag 383  Q
    |||||||||||||||||  || |||||||||||| ||  ||| |||| ||||||||||||||| ||| || || | |||||||||    
T  46139446 cactattgggcttggtttgtgaacataaatggtgggtggcccgatagcagaaacctgatagcaggtgacccaatggatcttggag 46139362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 408
Target Start/End: Original strand, 15019390 - 15019524
Alignment:
Q  273 tctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaa 372  Q
    ||||||||||| | ||||  ||||| |||||||| ||||||||| ||||  ||||||||| |||  || ||||   ||| ||||||| | |||||| ||     
T  15019390 tctttaacacatcccctcccgacca-cactattgagcttggttcgtggatttaaatggtgggttatccgatagcgaaaatctgatagtaggtggcccaat 15019488  T
Q  373 gaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||||| |||||| ||||| || |||||||||||||    
T  15019489 gaatctcggaggatgctctaataccatcttagaaat 15019524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 27484890 - 27484941
Alignment:
Q  458 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 509  Q
    ||||||||||||||||||||  |||| |||||||  ||||||||||||||||    
T  27484890 cacttataaacacatgttcaactcatcttttatccaatgtgagactctttaa 27484941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 366
Target Start/End: Complemental strand, 49629796 - 49629722
Alignment:
Q  293 gaccagcactattgggcttggttcttggacataaatggtgagtttc-ccaataggagaaacctgatagcaagtgg 366  Q
    ||||| |||||||||||||||||  ||||||||||||||| | | | || |||| ||||||||||||||| ||||    
T  49629796 gaccaacactattgggcttggtttatggacataaatggtgggatgctccgatagcagaaacctgatagcaggtgg 49629722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 511
Target Start/End: Original strand, 50052830 - 50052884
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||||||| ||| | |||||||| || |||||| ||||||||||||    
T  50052830 ccacttataaacacatggtcaggccatattttgtccgatgtgggactctttaaca 50052884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 437 - 511
Target Start/End: Complemental strand, 50930742 - 50930668
Alignment:
Q  437 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||| ||||  | ||||||||||||||||||| | | ||| ||||||| |||||| || |||||||||    
T  50930742 ttgtgaggtgaggattgcccccacttataaacacatgttaaggccatcttttatcagatgtgggagtctttaaca 50930668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 272507 - 272572
Alignment:
Q  264 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatg 329  Q
    ||||||||||| ||||||||  |||||| ||| |||||| ||| ||||| ||| ||||||||||||    
T  272507 atgtgagactcattaacacacttcctcacgacaagcactgttgagcttgattcatggacataaatg 272572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 472
Target Start/End: Original strand, 3975392 - 3975437
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacat 472  Q
    ||||||| ||||| |||||||||||| || ||||||||||||||||    
T  3975392 caaaatcggcttgagaggtgatgattatccccacttataaacacat 3975437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 361
Target Start/End: Original strand, 20303188 - 20303261
Alignment:
Q  288 ctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 361  Q
    |||| |||||||||| |||| |||||||| ||||||||||||||| ||   || ||||  ||||||||||||||    
T  20303188 ctcacgaccagcactgttggacttggttcgtggacataaatggtgggtggaccgatagcggaaacctgatagca 20303261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 408
Target Start/End: Complemental strand, 39620201 - 39620168
Alignment:
Q  375 atcttggaggaggctctgatgccatcttagaaat 408  Q
    |||||||||||||||||||| |||||||||||||    
T  39620201 atcttggaggaggctctgataccatcttagaaat 39620168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 4e-28; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 28245623 - 28245769
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||||||||||| |||||| | | ||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||||    
T  28245623 tccgatgtgagactctt-aacacaccccatcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatag 28245721  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||||| || | |||||||| ||||||||||| |||| ||||||||    
T  28245722 caggtggcccaatggatcttgga-gaggctctgataccatattagaaat 28245769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 287 - 408
Target Start/End: Complemental strand, 35788856 - 35788735
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||  |||   |||||||||||||| |||||| || | ||||||||||||    
T  35788856 cctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaacggatcttggaggag 35788757  T
Q  387 gctctgatgccatcttagaaat 408  Q
    |||||||| |||||||||||||    
T  35788756 gctctgataccatcttagaaat 35788735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 14119251 - 14119358
Alignment:
Q  146 gtgctttagcatgttctaggctttaactaaaact-atttaaacatcatcaaagaaatctagataatgaacatcattaaaatacaatcctagcactataag 244  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||  ||||||| |||| |||||||| |||| |||| |||| |||||| ||    
T  14119251 gtgctttaacatgttctaggctttaactaaaacttatttaaacatcatcaaaagaatctagctaataaacatcatcaaaacacaaacctaacactatgag 14119350  T
Q  245 caacttca 252  Q
    ||||||||    
T  14119351 caacttca 14119358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 294 - 408
Target Start/End: Original strand, 35819023 - 35819136
Alignment:
Q  294 accagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctga 393  Q
    ||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  |||||||||||||| |||||| || | ||||| || ||| ||||||    
T  35819023 accagcactattgggcttggttcgtggacataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatcttaga-gagactctga 35819121  T
Q  394 tgccatcttagaaat 408  Q
    |||||||||| ||||    
T  35819122 tgccatcttaaaaat 35819136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 275 - 408
Target Start/End: Complemental strand, 52559777 - 52559643
Alignment:
Q  275 tttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtgg-ccaaaag 373  Q
    ||||||||| | |||||  ||||||||||||||||||||||| ||||||||||||||| ||  ||| |||  | |||| |||||||| |||| ||||| |    
T  52559777 tttaacacaccccctcacaaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacataaacttgatagcaggtggcccaaacg 52559678  T
Q  374 aatcttggaggaggctctgatgccatcttagaaat 408  Q
     ||||| |||||||||||||| | |||||||||||    
T  52559677 gatctttgaggaggctctgatactatcttagaaat 52559643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 263 - 408
Target Start/End: Complemental strand, 6218423 - 6218280
Alignment:
Q  263 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 362  Q
    |||||||||||||| |||||| | ||||| ||||||||||||||||||||||||||| ||||||||| || ||  ||  ||||  |||||||||||| |     
T  6218423 gatgtgagactctt-aacacaccccctcacgaccagcactattgggcttggttcttgtacataaatgatgggtgacctgatagcggaaacctgatagtag 6218325  T
Q  363 gtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||  | || | |||||||| ||||||||||| |||||||||||||    
T  6218324 gtgatccaatggatcttgga-gaggctctgataccatcttagaaat 6218280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 260 - 447
Target Start/End: Original strand, 27634178 - 27634365
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||  | ||||| |||||||||||||||||||||||| ||||||||||  ||| ||   || |||| |||||||||||||    
T  27634178 tccgatgtgggactctt-aacaccccccctcacgaccagcactattgggcttggttcgtggacataaacagtgggtggtccgatagcagaaacctgatag 27634276  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt-gagcataactcatcctt-caaaatcagcttgtgaggtga 447  Q
    ||||||| | || | |||||||| ||||||||||| |||| ||  || || | || |||||||||||| ||||||| |||||| ||||||    
T  27634277 caagtggtccaatggatcttgga-gaggctctgataccatgttgtaatttggggcctaactcatccttacaaaatcggcttgtaaggtga 27634365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 408
Target Start/End: Original strand, 22231185 - 22231316
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 375  Q
    |||||||| | ||||| ||  |||||||||||||||||||| ||||||||||||||  ||  ||| ||||  |||||||||||||| |||||| || | |    
T  22231185 ttaacacatcccctcatgatgagcactattgggcttggttcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatgga 22231284  T
Q  376 tcttggaggaggctctgatgccatcttagaaat 408  Q
    | ||||| ||||||||||| |||||||||||||    
T  22231285 ttttgga-gaggctctgataccatcttagaaat 22231316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 257 - 368
Target Start/End: Original strand, 5398569 - 5398679
Alignment:
Q  257 ttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctga 356  Q
    |||||||||||| ||||||| |||||| | ||||| ||||||||||||| |||||||||| ||||||||||||||| ||   || ||||  |||||||||    
T  5398569 ttgtccgatgtgggactctt-aacacaccccctcacgaccagcactatttggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctga 5398667  T
Q  357 tagcaagtggcc 368  Q
    ||||| ||||||    
T  5398668 tagcaggtggcc 5398679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 408
Target Start/End: Original strand, 35796837 - 35796985
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    |||||||||||  |||||| |||||| | ||||| |||||||||||||||||||||||| |||| |||||||||| ||  ||| ||||  ||||||||||    
T  35796837 tgtccgatgtggaactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggagataaatggtgggtggcccgatagcggaaacctgat 35796935  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||| || | | || | ||| | || ||||||||||| |||||||||||||    
T  35796936 agcaggtagtccaatggatc-tcgaagaggctctgataccatcttagaaat 35796985  T

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Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 408
Target Start/End: Original strand, 40717301 - 40717449
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    |||| |||||| ||||||| |||||| | ||||| ||||||||||||| |||||||||  ||||||||||||||| ||   || ||||  ||||||||||    
T  40717301 tgtctgatgtgggactctt-aacacaccccctcacgaccagcactattaggcttggtttgtggacataaatggtgggtggtccgatagcggaaacctgat 40717399  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
     ||| |||||| || | || ||||| ||||||||||| |||||||||||||    
T  40717400 ggcaggtggcccaatggatattgga-gaggctctgataccatcttagaaat 40717449  T

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Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 335
Target Start/End: Complemental strand, 43743211 - 43743132
Alignment:
Q  256 tttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagt 335  Q
    ||||||||||||||||||||||||||||   |||||  ||||||| ||||||| ||||||| |||||||||||| |||||    
T  43743211 tttgtccgatgtgagactctttaacacactccctcacaaccagcattattgggtttggttcgtggacataaatgatgagt 43743132  T

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Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 408
Target Start/End: Original strand, 50543442 - 50543575
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaa--aag 373  Q
    |||||||| | ||||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||| |||   |||||||||||||| |||| |||  | |    
T  50543442 ttaacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtcaaatatg 50543541  T
Q  374 aatcttggaggaggctctgatgccatcttagaaat 408  Q
     |||||||| |||||||||||  ||||||||||||    
T  50543542 gatcttgga-gaggctctgatatcatcttagaaat 50543575  T

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Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 405 - 511
Target Start/End: Original strand, 18981532 - 18981634
Alignment:
Q  405 aaattgagcataactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagact 503  Q
    |||||||||||||||||||||| ||||| |  |||||||||||  |||    ||||||||||||||||||||||||| || |||||| |||||||| |||    
T  18981532 aaattgagcataactcatccttacaaaaccgacttgtgaggtggggat----tccacttataaacacatgttcatgttatcttttatttgatgtga-act 18981626  T
Q  504 ctttaaca 511  Q
    ||||||||    
T  18981627 ctttaaca 18981634  T

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Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 255 - 408
Target Start/End: Complemental strand, 7926550 - 7926404
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 354  Q
    |||||||||||||| |||||||||||||| | ||||| ||| | || ||||||||||||||| |||      ||| || ||  ||| ||||  |||||||    
T  7926550 ttttgtccgatgtgggactctttaacacaccccctcacgactaccattattgggcttggttcgtgg------atgatgggtggccctatagtggaaacct 7926457  T
Q  355 gatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    ||||||| |||||| || | |||||||| ||||||||||| ||||||| |||||    
T  7926456 gatagcaggtggcccaatggatcttgga-gaggctctgataccatcttcgaaat 7926404  T

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Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 378 - 506
Target Start/End: Original strand, 20726803 - 20726937
Alignment:
Q  378 ttggaggaggctctgatgccatcttagaa-----attgagcataactcatccttcaaaatcag-cttgtgaggtgatgattttctccacttataaacaca 471  Q
    ||||||||||||||||| ||||||||||      |||| || ||||||||||||  ||| | | |||  ||||||| ||||  | |||||||||||||||    
T  20726803 ttggaggaggctctgataccatcttagattttatattgggcctaactcatccttataaaactgactttggaggtgaggattgcccccacttataaacaca 20726902  T
Q  472 tgttcatgtcatattttatctgatgtgagactctt 506  Q
    |||||||||||| |||| | |||||||||||||||    
T  20726903 tgttcatgtcatcttttgtttgatgtgagactctt 20726937  T

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Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 410
Target Start/End: Complemental strand, 31945141 - 31944997
Alignment:
Q  264 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaag 363  Q
    ||||||||||||||||||||  |||||| ||| ||| |||||||| ||||||  | ||||||||||||  ||   || |||| |||||||| |||||| |    
T  31945141 atgtgagactctttaacacacatcctcacgactagccctattgggtttggtttgtagacataaatggtaggtggtccgatagcagaaacctaatagcatg 31945042  T
Q  364 tggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    ||| ||| || |||||||| ||| |||||||| ||| ||||||||||    
T  31945041 tggtcaatag-atcttgga-gagactctgatgtcattttagaaattg 31944997  T

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Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 5398305 - 5398407
Alignment:
Q  257 ttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctga 356  Q
    |||||| ||||| ||||||| |||||| | ||||| ||||| || ||||||||||||||| ||||||||||||||| ||   || ||||| |||||||||    
T  5398305 ttgtccaatgtgggactctt-aacacacc-cctcacgaccaacattattgggcttggttcgtggacataaatggtgggtggtccgataggggaaacctga 5398402  T
Q  357 tagca 361  Q
    |||||    
T  5398403 tagca 5398407  T

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Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 511
Target Start/End: Original strand, 12005511 - 12005587
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||| ||||  | |||||||| |||| ||||||||| |||||||| || |||||| ||||||||||||    
T  12005511 gcttgtgaggtgaggattgcccccacttattaacaaatgttcatgccatattttgtccgatgtgggactctttaaca 12005587  T

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Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 12005560 - 12005642
Alignment:
Q  254 attttgtccgatgtgagactctttaacaca-gctcctcaggaccagcactattgggc---ttggttcttggacataaatggtg 332  Q
    ||||||||||||||| ||||||||||||||  | ||||| |||||||||||||||||   ||||||| | |||||||||||||    
T  12005560 attttgtccgatgtgggactctttaacacacacccctcacgaccagcactattgggcttgttggttcgttgacataaatggtg 12005642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 459 - 511
Target Start/End: Complemental strand, 31943381 - 31943329
Alignment:
Q  459 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||||||||||||  |||||||||||| || |||||||||||||    
T  31943381 acttataaacacatgttcatgttttattttatctgaggtaagactctttaaca 31943329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 270 - 393
Target Start/End: Original strand, 25324140 - 25324263
Alignment:
Q  270 gactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggcca 369  Q
    |||||||||||||| | |||||   |||  ||||||||||||||| | | || |||||||||| ||  ||| ||||  ||||| |||||||| ||||||     
T  25324140 gactctttaacacaccccctcacacccaatactattgggcttggtgcgtagatataaatggtgggtggcccgatagcggaaacttgatagcaggtggccc 25324239  T
Q  370 aaagaatcttggaggaggctctga 393  Q
    || | |||||||||||||||||||    
T  25324240 aatggatcttggaggaggctctga 25324263  T

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Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 255 - 410
Target Start/End: Original strand, 30530018 - 30530172
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 354  Q
    ||||| ||||||||| |||||||||||||   |||||  |||| |||||||| ||||||||| |   |||  |||||| ||  | | ||||  |||| ||    
T  30530018 ttttgcccgatgtgaaactctttaacacacaccctcacaaccatcactattgagcttggttcataagcatcgatggtgggtgacgcgatagcggaaatct 30530117  T
Q  355 gatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    ||||||| |||||| || | ||||||||| |||||||||| |||||||||||||||    
T  30530118 gatagcaggtggcctaatggatcttggag-aggctctgataccatcttagaaattg 30530172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 511
Target Start/End: Original strand, 8904535 - 8904585
Alignment:
Q  461 ttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||| |||||    
T  8904535 ttataaacaaatgttcatgtcatcttttgtctgatgtgagactctctaaca 8904585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 1216035 - 1215990
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||    
T  1216035 cctcacgaccagcattattgagcttggttcttggacataaatggtg 1215990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 17111752 - 17111685
Alignment:
Q  263 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    |||||| ||||||| ||||| |||||||| ||||| ||||||| ||||||||||||||||||| ||||||    
T  17111752 gatgtgggactctt-aacac-gctcctcacgaccaacactattaggcttggttcttggacatatatggtg 17111685  T

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Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 14089560 - 14089452
Alignment:
Q  122 acacaatgcgacaatgattgttatgtgctttagcatgtt-ctaggctttaactaaaactatttaaacatcatcaaagaaatctagataatgaacatcatt 220  Q
    |||||||| | ||||||||| || |||||||| |||||| ||| ||| ||||||| | | |  ||||||||||||| ||| |||| |||||||||||||     
T  14089560 acacaatgaggcaatgattgctaggtgctttaacatgtttctaagctataactaacaatgtaaaaacatcatcaaataaacctagctaatgaacatcatc 14089461  T
Q  221 aaaatacaa 229  Q
    |||| ||||    
T  14089460 aaaacacaa 14089452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 437 - 509
Target Start/End: Complemental strand, 21041391 - 21041319
Alignment:
Q  437 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 509  Q
    ||||||||||| ||||||| |||||||||||||||||||   | ||| |||| || |||||| ||||||||||    
T  21041391 ttgtgaggtgaggattttccccacttataaacacatgttttggccatcttttgtccgatgtgggactctttaa 21041319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 475
Target Start/End: Complemental strand, 33107912 - 33107872
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgtt 475  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  33107912 gcttgtgaggtgaagattgtctccacttataaacacatgtt 33107872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 6218481 - 6218410
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 506  Q
    ||||||||||||||||||  | ||||||||||||||||  | | ||||| |  |||||||||||||||||||    
T  6218481 gcttgtgaggtgatgattgcccccacttataaacacattgttaggtcatctcctatctgatgtgagactctt 6218410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 512
Target Start/End: Complemental strand, 21393364 - 21393309
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    |||||||||  |||||||||| ||||||||||||||| ||||||||| || |||||    
T  21393364 ccacttatatgcacatgttcaagtcatattttatctgttgtgagactattcaacaa 21393309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 406
Target Start/End: Complemental strand, 22822535 - 22822428
Alignment:
Q  299 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 398  Q
    ||||||||| |||||| | ||||  || |||||||||  ||| ||||  |||||||||||||| || ||| || || ||||| ||||||||||||| | |    
T  22822535 cactattggacttggtgcgtggatgtatatggtgagtggcccgatagcggaaacctgatagcaggtagcccaacgagtcttgtaggaggctctgatacaa 22822436  T
Q  399 tcttagaa 406  Q
    ||||||||    
T  22822435 tcttagaa 22822428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 513
Target Start/End: Complemental strand, 23209860 - 23209806
Alignment:
Q  458 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaaa 513  Q
    |||||||||||||||||||| |||||||||| || ||| | |||||||||||||||    
T  23209860 cacttataaacacatgttca-gtcatattttgtccgatataagactctttaacaaa 23209806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Complemental strand, 33108126 - 33108075
Alignment:
Q  458 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 509  Q
    |||||||||||||||||| |||||||||||| |  ||||| |||||||||||    
T  33108126 cacttataaacacatgtttatgtcatattttgttcgatgtaagactctttaa 33108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 40716569 - 40716628
Alignment:
Q  348 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaa 407  Q
    |||||||||||||| |||||| || | ||| |||| ||||||||||| ||||||||||||    
T  40716569 gaaacctgatagcaggtggcccaacggatcgtggatgaggctctgataccatcttagaaa 40716628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 1215968 - 1215906
Alignment:
Q  270 gactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||||||||||||   ||| | ||||| ||||||||| |||||||| |||||||||||||||    
T  1215968 gactctttaacacactcccttatgaccaacactattggacttggttcgtggacataaatggtg 1215906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 4464431 - 4464373
Alignment:
Q  348 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaa 406  Q
    |||||||||||||| ||| || || | |||||| ||||||||||||| |||||||||||    
T  4464431 gaaacctgatagcatgtgacccaatggatcttgaaggaggctctgataccatcttagaa 4464373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 368
Target Start/End: Original strand, 6666506 - 6666604
Alignment:
Q  270 gactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggcc 368  Q
    ||||||||||||||   ||||| | | |||||||||||||||||| | |||| |||||||||| ||  ||| |||| |||| ||| |||||| ||||||    
T  6666506 gactctttaacacacaccctcacgcctagcactattgggcttggtgcatggatataaatggtgggtgacccgatagaagaatccttatagcaggtggcc 6666604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 260 - 366
Target Start/End: Original strand, 6778540 - 6778645
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| || |||||||||| || ||||||| | ||||||||||| | ||  ||| ||||  ||||||||||||    
T  6778540 tccgatgtgggactctt-aacacaccccctcacgatcagcactattaggtttggttcgtagacataaatggggggtggcccgatagcggaaacctgatag 6778638  T
Q  360 caagtgg 366  Q
    || ||||    
T  6778639 catgtgg 6778645  T

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Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 497
Target Start/End: Complemental strand, 26030362 - 26030293
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgt 497  Q
    |||||||| ||| ||| |||| |||| || ||| ||||||||||||||||||| ||||||||||| |||||    
T  26030362 caaaatcaacttatgaagtgaggattgtc-ccatttataaacacatgttcatgccatattttatccgatgt 26030293  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 278 - 368
Target Start/End: Original strand, 35645279 - 35645369
Alignment:
Q  278 aacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggcc 368  Q
    |||||| | ||||| ||||||||| |||||| ||||||| ||||||||||||| | ||  ||| ||||  ||||| |||||||| ||||||    
T  35645279 aacacaccccctcacgaccagcacaattgggtttggttcgtggacataaatggcgggtggcccgatagcggaaacttgatagcatgtggcc 35645369  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 278 - 368
Target Start/End: Original strand, 35645568 - 35645658
Alignment:
Q  278 aacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggcc 368  Q
    |||||| | ||||| ||||||||| |||||| ||||||| ||||||||||||| | ||  ||| ||||  ||||| |||||||| ||||||    
T  35645568 aacacaccccctcacgaccagcacaattgggtttggttcgtggacataaatggcgggtggcccgatagcggaaacttgatagcatgtggcc 35645658  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 408
Target Start/End: Complemental strand, 4645838 - 4645718
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| ||||| |||| ||||||||| ||| ||||||||| ||||| ||  ||| ||||  |||||||||||||| ||| || || | ||||| || |||    
T  4645838 cctcacgaccaacacttttgggcttgattcgtggacataattggtgggtggcccgatagcggaaacctgatagcaggtgacccaatggatctttga-gag 4645740  T
Q  387 gctctgatgccatcttagaaat 408  Q
    |||||||| | |||||| ||||    
T  4645739 gctctgatactatcttataaat 4645718  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 307 - 408
Target Start/End: Original strand, 4905644 - 4905744
Alignment:
Q  307 ggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaa 406  Q
    |||||| ||| || |||||||||||| ||  ||| |||| |||||||| |||||| |||||| || | | |||||| |||||||||||  ||||||||||    
T  4905644 ggcttgattcgtgaacataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatggagcttgga-gaggctctgatatcatcttagaa 4905742  T
Q  407 at 408  Q
    ||    
T  4905743 at 4905744  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 21646390 - 21646435
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  21646390 cctcacgaccaacactattggacttggttcatggacataaatggtg 21646435  T

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Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 512
Target Start/End: Complemental strand, 30971743 - 30971690
Alignment:
Q  459 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    ||||||||||| || || | |||||||||||| ||||||||||||| |||||||    
T  30971743 acttataaacatatatttaagtcatattttatttgatgtgagactcattaacaa 30971690  T

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Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 257 - 408
Target Start/End: Complemental strand, 8084352 - 8084203
Alignment:
Q  257 ttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctga 356  Q
    |||| ||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   |||||||   ||||||||    
T  8084352 ttgttcgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgatccaatagcgaaaacctga 8084254  T
Q  357 tagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    ||||| |||||| || | |||||||| ||||||||||| |||||||||||||    
T  8084253 tagcatgtggcccaatggatcttgga-gaggctctgataccatcttagaaat 8084203  T

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Target: chr8; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 258 - 408
Target Start/End: Original strand, 11232289 - 11232437
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  | | ||||  ||||||||||    
T  11232289 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgat 11232387  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  11232388 aacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 11232437  T

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Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 260 - 366
Target Start/End: Original strand, 3157106 - 3157211
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||||||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| || |||| ||||  ||||||||||||    
T  3157106 tccgatgtgagactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcggaaacctgatag 3157204  T
Q  360 caagtgg 366  Q
    || ||||    
T  3157205 caggtgg 3157211  T

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Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 39052791 - 39052937
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||  ||||  ||||||||||||    
T  39052791 tccgatgtgggactctt-aacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatag 39052889  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || | ||||||| | |||||||| |||||||| || |||||||||||||    
T  39052890 cagggggccaaatggatcttgga-gaggctctaataccatcttagaaat 39052937  T

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Target: chr8; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 18004217 - 18004332
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||| ||  ||| ||||  |||||||||||||| |||||| || | |||||||| |||    
T  18004217 cctcacgaccagcactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgga-gag 18004315  T
Q  387 gctctgatgccatctta 403  Q
    |||||||| ||||||||    
T  18004316 gctctgataccatctta 18004332  T

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Target: chr8; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 276 - 408
Target Start/End: Complemental strand, 20301468 - 20301337
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 375  Q
    |||||||| | ||||| |||||||||||||||||||||||| | ||||||||||||| ||   || ||||  |||||||||||||| |||||| || | |    
T  20301468 ttaacacaccccctcacgaccagcactattgggcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatgga 20301369  T
Q  376 tcttggaggaggctctgatgccatcttagaaat 408  Q
    |||| || ||||||||||| |||||||||||||    
T  20301368 tctt-gaagaggctctgataccatcttagaaat 20301337  T

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Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 276 - 408
Target Start/End: Complemental strand, 21088100 - 21087969
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 375  Q
    |||||||| | ||||| |||||||||||||||||||||||| | ||||||||||||| ||   || ||||  |||||||||||||| |||||| || | |    
T  21088100 ttaacacaccccctcacgaccagcactattgggcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatgga 21088001  T
Q  376 tcttggaggaggctctgatgccatcttagaaat 408  Q
    |||| || ||||||||||| |||||||||||||    
T  21088000 tctt-gaagaggctctgataccatcttagaaat 21087969  T

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Target: chr8; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 276 - 408
Target Start/End: Complemental strand, 41790865 - 41790734
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 375  Q
    |||||||| | ||||| |||||||||| ||||||||||||| ||||||||||||||| ||  | | ||||  |||||||||||||| |||||| || | |    
T  41790865 ttaacacaccccctcacgaccagcactcttgggcttggttcatggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatgga 41790766  T
Q  376 tcttggaggaggctctgatgccatcttagaaat 408  Q
    |||| || ||||||||||| |||||||||||||    
T  41790765 tctt-gaagaggctctgataccatcttagaaat 41790734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 287 - 408
Target Start/End: Complemental strand, 12688268 - 12688148
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| ||||| ||||||||||||| |||| ||||||||||||||| ||  |||||||| ||||||||||||||| |||||| || | ||||| || |||    
T  12688268 cctcatgaccatcactattgggcttagttcgtggacataaatggtgggtggcccaatagaagaaacctgatagcaggtggcccaatggatctt-gaagag 12688170  T
Q  387 gctctgatgccatcttagaaat 408  Q
    ||||| ||  ||||||||||||    
T  12688169 gctctaatatcatcttagaaat 12688148  T

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Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 264 - 408
Target Start/End: Original strand, 3157425 - 3157567
Alignment:
Q  264 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaag 363  Q
    ||||||||||||| |||||| |  |||| |||||||||||||||||||||||| ||||||||||||||| || |||| ||||   ||||||||||||| |    
T  3157425 atgtgagactctt-aacacacccactcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgaaaacctgatagcagg 3157523  T
Q  364 tggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    ||| | || | || ||||| |||||||||||  ||||||| ||||    
T  3157524 tggtccaatggattttgga-gaggctctgatatcatcttataaat 3157567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 427 - 511
Target Start/End: Original strand, 10614973 - 10615057
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||| ||||||||||||| ||||  | ||| || |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  10614973 caaaatcggcttgtgaggtgaagattacccccatttgtaaacacatgttcatgtcatattttatccgatgtgggactctttaaca 10615057  T

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Target: chr8; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 37867925 - 37868014
Alignment:
Q  256 tttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaatag 345  Q
    |||||||||||| |||||||||||||||   ||||| ||||| ||||||||| |||||||| ||||||||||||||| ||  ||||||||    
T  37867925 tttgtccgatgttagactctttaacacacaccctcacgaccaacactattggccttggttcgtggacataaatggtgggtggcccaatag 37868014  T

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Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 435 - 511
Target Start/End: Original strand, 31079604 - 31079680
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||| ||||  ||||||||||||||||||||||| | ||||||||| | |||||| ||||||||||||    
T  31079604 gcttgtgaggtgaggattgcctccacttataaacacatgttcaagccatattttacccgatgtgggactctttaaca 31079680  T

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Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 31079660 - 31079728
Alignment:
Q  261 ccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatg 329  Q
    |||||||| |||||||||||||| ||||||| ||||| | |||||||||||||||| ||||||||||||    
T  31079660 ccgatgtgggactctttaacacacctcctcacgaccatccctattgggcttggttcgtggacataaatg 31079728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 296 - 408
Target Start/End: Complemental strand, 31197801 - 31197690
Alignment:
Q  296 cagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatg 395  Q
    ||||||||||| ||||||||| ||||||||||||||| ||   || ||||  |||||||||||||| |||||| || | |||| ||| |||||||||||     
T  31197801 cagcactattgagcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctcgga-gaggctctgata 31197703  T
Q  396 ccatcttagaaat 408  Q
    |||||||||||||    
T  31197702 ccatcttagaaat 31197690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 37868445 - 37868591
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||  |||||||||||||  | ||||| |||||||| ||||||||||||||| || |||||||||||| ||  ||||||||  ||||| ||||||    
T  37868445 tccgatgttcgactctttaacacccc-cctcacgaccagcaatattgggcttggttcgtgtacataaatggtgggtggcccaatagcggaaacttgatag 37868543  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |  |||||| || | |||||||| |||||| |||| |||||||| ||||    
T  37868544 cgggtggcccaatggatcttgga-gaggctatgataccatcttaaaaat 37868591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 371
Target Start/End: Original strand, 39052637 - 39052744
Alignment:
Q  263 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 362  Q
    |||||| ||||||| |||||| | ||||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||  ||||  ||||||||||||||     
T  39052637 gatgtgggactctt-aacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcag 39052735  T
Q  363 gtggccaaa 371  Q
    |||||||||    
T  39052736 gtggccaaa 39052744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 428 - 511
Target Start/End: Original strand, 8466759 - 8466842
Alignment:
Q  428 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||| ||||||||||||||| |||| || ||||||||||||||  ||||||| ||| | ||||| |||||||||||||||||||    
T  8466759 aaaaccagcttgtgaggtgaggattgtccccacttataaacactcgttcatgccatctcttatccgatgtgagactctttaaca 8466842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 351
Target Start/End: Original strand, 37868165 - 37868260
Alignment:
Q  256 tttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaa 351  Q
    |||||| ||||| |||||||||||||||   ||||| ||||| ||||||||||||||| || ||||||||||||||| ||  |||||||| |||||    
T  37868165 tttgtctgatgttagactctttaacacacaccctcacgaccaacactattgggcttggctcgtggacataaatggtgggtgacccaatagcagaaa 37868260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 383
Target Start/End: Original strand, 35682876 - 35683000
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    |||||||||||  |||||| |||||  | ||||| |||||||||||||| ||||||||| ||||||||||||||| ||  ||| ||||  ||||||| ||    
T  35682876 tgtccgatgtggaactctt-aacaccacccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccgatagcggaaacctaat 35682974  T
Q  358 agcaagtggccaaaagaatcttggag 383  Q
    |||| |||||| || | |||||||||    
T  35682975 agcaggtggcccaatggatcttggag 35683000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 280 - 408
Target Start/End: Original strand, 5675937 - 5676064
Alignment:
Q  280 cacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatctt 379  Q
    |||| ||||||| |||||||| ||||||||||||||| | ||||||||||||| ||  |||||||    ||||||||||||| |||||| |  |||||||    
T  5675937 cacacctcctcacgaccagcagtattgggcttggttcgtagacataaatggtgggtgacccaatatcgaaaacctgatagcaggtggcctagtgaatctt 5676036  T
Q  380 ggaggaggctctgatgccatcttagaaat 408  Q
     || ||| |||||||  ||||||||||||    
T  5676037 -gaagagactctgatatcatcttagaaat 5676064  T

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Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 29006074 - 29006007
Alignment:
Q  264 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||| | || |||||||||||||||    
T  29006074 atgtgagactctttaataca-ctcctcacgaccagcactattgggcttcgctcatggacataaatggtg 29006007  T

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Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 254 - 409
Target Start/End: Complemental strand, 10615623 - 10615469
Alignment:
Q  254 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacc 353  Q
    ||||||| ||||||  ||||||||||||||   ||||| ||| ||||||||||| |||||||| |||| |||||| ||  ||  ||| ||||  ||||||    
T  10615623 attttgttcgatgtaggactctttaacacacaccctcacgactagcactattggacttggttcgtggagataaatagttggtgacccgatagcggaaacc 10615524  T
Q  354 tgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt 409  Q
    ||||| || ||||   || | |||||||| ||||||||||| ||||||||||||||    
T  10615523 tgatatcaggtggtacaatggatcttgga-gaggctctgataccatcttagaaatt 10615469  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 287 - 366
Target Start/End: Complemental strand, 39960153 - 39960074
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtgg 366  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| ||  | | ||||  |||||||||||||| ||||    
T  39960153 cctcacgaccagcactattgggcttggttcgtggacataaatggtgggtagctcgatagcggaaacctgatagcaggtgg 39960074  T

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Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 428 - 498
Target Start/End: Original strand, 12289204 - 12289274
Alignment:
Q  428 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtg 498  Q
    ||||| || ||||||||||||||||  |||||||||||||||||||||||| |||| |||| | |||||||    
T  12289204 aaaatgagtttgtgaggtgatgattacctccacttataaacacatgttcatatcatcttttgtttgatgtg 12289274  T

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Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 20094659 - 20094728
Alignment:
Q  262 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||||| ||||||| |||||  | ||||| |||||||||||||||||||||||| |||||||||||||||    
T  20094659 cgatgtgggactctt-aacacgccccctcacgaccagcactattgggcttggttcgtggacataaatggtg 20094728  T

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Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 415 - 511
Target Start/End: Complemental strand, 7730004 - 7729907
Alignment:
Q  415 taactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||||||| ||||| | ||||||||||||| ||||  | ||||||||||||||||| ||| | ||| |  ||||||||||| ||||||||||||    
T  7730004 taactcatccttacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatggtcaggccatctcatatctgatgtgggactctttaaca 7729907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 5675831 - 5675902
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||||||  ||||||||| |||| ||||||  ||||||||||||||| |||||||| |||||||||||||||    
T  5675831 tccgatgtaggactcttta-cacacctcctctcgaccagcactattggacttggttcgtggacataaatggtg 5675902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 8849411 - 8849335
Alignment:
Q  254 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatgg 330  Q
    |||||||| ||| ||||||||||||||||| | ||||| ||||| |||||||||| ||||||| | || ||||||||    
T  8849411 attttgtctgatttgagactctttaacacaccccctcacgaccaacactattgggtttggttcatagatataaatgg 8849335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 38476168 - 38476112
Alignment:
Q  354 tgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    |||||| |||||||| || | |||||||||||||||||||| |||||||||||||||    
T  38476168 tgatagtaagtggcccaatggatcttggaggaggctctgataccatcttagaaattg 38476112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 293 - 332
Target Start/End: Original strand, 15797137 - 15797176
Alignment:
Q  293 gaccagcactattgggcttggttcttggacataaatggtg 332  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  15797137 gaccagcactattgggcttggttcgtggacataaatggtg 15797176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 10615649 - 10615596
Alignment:
Q  458 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||||||||||||||||||||| |  |||||  ||||||||||||    
T  10615649 cacttataaacacatgttcatgtcatattttgttcgatgtaggactctttaaca 10615596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 15042793 - 15042894
Alignment:
Q  308 gcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggag-gaggctctgatgccatcttagaa 406  Q
    ||||||||| |||||||||| |||| ||  ||  ||||  |||||||||||||| |||||| || ||||||||||| |||||| ||||  ||||||||||    
T  15042793 gcttggttcgtggacataaacggtgggtggcctgatagcggaaacctgatagcaggtggcccaatgaatcttggagagaggctatgataacatcttagaa 15042892  T
Q  407 at 408  Q
    ||    
T  15042893 at 15042894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 26208198 - 26208259
Alignment:
Q  349 aaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    ||||||||||||| |||||| || | ||||| ||| |||||||||| |||||||||||||||    
T  26208198 aaacctgatagcaggtggcccaacggatcttagagaaggctctgataccatcttagaaattg 26208259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 511
Target Start/End: Complemental strand, 8715672 - 8715617
Alignment:
Q  456 tccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||||||||||||||| || |||||| | ||||| ||||||| ||||    
T  8715672 tccacttataaacacatgttcatgttatcttttatttaatgtgggactcttcaaca 8715617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 8715841 - 8715799
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatg 329  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||    
T  8715841 cctcatgaccagcactattgggtttggttcctggacataaatg 8715799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 511
Target Start/End: Complemental strand, 8716371 - 8716317
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||||||| |||||||||||||| |||| ||||| ||| | ||||||||||    
T  8716371 ccacttataaactcatgttcatgtcatcttttgtctgaagtgtgtctctttaaca 8716317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 472
Target Start/End: Original strand, 5675768 - 5675813
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacat 472  Q
    |||||||||||||||||||||  ||| |||| ||||||||||||||    
T  5675768 caaaatcagcttgtgaggtgagaattgtctctacttataaacacat 5675813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 512
Target Start/End: Complemental strand, 6462981 - 6462924
Alignment:
Q  455 ctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    ||||||||||||||||||  ||| ||||| | ||||| ||||||| ||||||||||||    
T  6462981 ctccacttataaacacattgtcaagtcatctcttatccgatgtgaaactctttaacaa 6462924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 472
Target Start/End: Original strand, 29099774 - 29099819
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacat 472  Q
    ||||||||| ||||||||||| ||||  ||||||||||||||||||    
T  29099774 caaaatcagtttgtgaggtgaagattgcctccacttataaacacat 29099819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 258 - 408
Target Start/End: Complemental strand, 2140 - 1992
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  | | ||||  ||||||||||    
T  2140 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgat 2042  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  2041 aacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 1992  T

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Target: chr7 (Bit Score: 61; Significance: 9e-26; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 258 - 410
Target Start/End: Complemental strand, 1596817 - 1596667
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| ||||||    |||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||    
T  1596817 tgtccgatgtgggactctt-aacacacactctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgat 1596719  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||||    
T  1596718 aacatgtggcccaatggatcttgga-gaggctctgataccatcttagaaattg 1596667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 293 - 408
Target Start/End: Complemental strand, 25620326 - 25620212
Alignment:
Q  293 gaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctg 392  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||  ||||||||  |||||||||||||| |||||| || | |||||||| |||||||||    
T  25620326 gaccaacactattgggcttggttcgtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttgga-gaggctctg 25620228  T
Q  393 atgccatcttagaaat 408  Q
    || |||||||||||||    
T  25620227 ataccatcttagaaat 25620212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 258 - 408
Target Start/End: Complemental strand, 21861518 - 21861370
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    |||||||||||  |||||| |||||| | ||||| ||||||||||||| |||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||    
T  21861518 tgtccgatgtggaactctt-aacacaccccctcacgaccagcactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgat 21861420  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  21861419 aacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 21861370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 258 - 408
Target Start/End: Original strand, 36277086 - 36277234
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    |||| |||||||||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   || ||||  ||||||||||    
T  36277086 tgtctgatgtgagactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgat 36277184  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || | |||||| || | |||||||| |||||||||||  ||||||||||||    
T  36277185 agtaggtggcccaatggatcttgga-gaggctctgataacatcttagaaat 36277234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 260 - 408
Target Start/End: Complemental strand, 33834413 - 33834267
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| ||| || | | ||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||| |||||  |||||||||||    
T  33834413 tccgatgtgggactctt-aacccaccccttcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgatagggaaaacctgatag 33834315  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  33834314 caggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 33834267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 258 - 408
Target Start/End: Complemental strand, 29469829 - 29469681
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||| ||| ||||||||||||||| ||  ||| ||||  ||| ||||||    
T  29469829 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttgattcgtggacataaatggtgggtggcccgatagcggaagcctgat 29469731  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    | || |||||| || | |||||||| ||||||||||| |||| ||||||||    
T  29469730 aacaggtggcccaatggatcttgga-gaggctctgataccatattagaaat 29469681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 260 - 410
Target Start/End: Complemental strand, 22574823 - 22574675
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||||||||||| |||||| | ||||| ||||| |||||||||||||||||| | ||||||||||||| ||   || ||||  ||||||||||||    
T  22574823 tccgatgtgagactctt-aacacaccacctcacgaccaacactattgggcttggttcgtagacataaatggtgggtggtccgatagctgaaacctgatag 22574725  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    || |||||| || | |||||||| ||| |||| || ||||| |||||||||    
T  22574724 caggtggcccaatggatcttgga-gagactcttataccatcatagaaattg 22574675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 260 - 361
Target Start/End: Original strand, 3519822 - 3519922
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||||| ||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||||    
T  3519822 tccgatgtgggactctt-aacacaccccctcacgaccagcattattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatag 3519920  T
Q  360 ca 361  Q
    ||    
T  3519921 ca 3519922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 287 - 408
Target Start/End: Original strand, 3519927 - 3520047
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| || |||| ||||   ||||| ||||||| |||||| || | ||| |||| |||    
T  3519927 cctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgaaaaccagatagcaggtggcccaatggatcatgga-gag 3520025  T
Q  387 gctctgatgccatcttagaaat 408  Q
    |||||||| ||| || ||||||    
T  3520026 gctctgataccaactaagaaat 3520047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 287 - 408
Target Start/End: Complemental strand, 4886525 - 4886405
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||| ||  | | |||| |||||| |||||||| |||||| || | |||||||| |||    
T  4886525 cctcacgaccagtactattgggcttggttcgtggacataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatggatcttgga-gag 4886427  T
Q  387 gctctgatgccatcttagaaat 408  Q
     | ||||| |||||||||||||    
T  4886426 accctgataccatcttagaaat 4886405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 260 - 405
Target Start/End: Complemental strand, 31892374 - 31892231
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||||||||||| |||||| | ||||| ||||| || ||||||||||||||| ||||||||||||||| ||  ||  |||   ||||||||||||    
T  31892374 tccgatgtgagactctt-aacacaccccctcacgaccatcattattgggcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatag 31892276  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttaga 405  Q
    || |||||| ||    ||||||| ||||||||||| ||||||||||    
T  31892275 caggtggcccaataggtcttgga-gaggctctgattccatcttaga 31892231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 261 - 409
Target Start/End: Original strand, 30727216 - 30727364
Alignment:
Q  261 ccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagc 360  Q
    ||||||||  ||||||||||||| | ||||| | ||| ||||||||||||| |||  |||| |||||||||| ||  ||||||||  ||||||||||||     
T  30727216 ccgatgtgtcactctttaacacaccccctcacgcccaacactattgggcttagtttgtggatataaatggtgggtggcccaatagcggaaacctgataga 30727315  T
Q  361 aagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt 409  Q
    | |||||| ||  |||||||||  || ||||||| |||||||| |||||    
T  30727316 aggtggcccaacaaatcttggattagactctgataccatcttaaaaatt 30727364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 428 - 503
Target Start/End: Original strand, 40898957 - 40899032
Alignment:
Q  428 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagact 503  Q
    |||| ||||||||||||||||||||  | |||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  40898957 aaaaccagcttgtgaggtgatgattgcccccacttataaacacatgttcagatcatattttatttgatgcgagact 40899032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 26239864 - 26239926
Alignment:
Q  348 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    |||||||||||||| |||||| || | |||||||||||||||||||| |||||||||||||||    
T  26239864 gaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaattg 26239926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 40746130 - 40746200
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| |||||||||||||||    
T  40746130 tccgatgtgggactctt-aacacacc-cctcacgaccagcactattgggcttggttcgtggacataaatggtg 40746200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 261 - 408
Target Start/End: Original strand, 2404272 - 2404416
Alignment:
Q  261 ccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagc 360  Q
    |||||||| ||||||| |||||| ||| ||| |||||||||||||| ||||||||| |||||||||| |||  ||   |||||||  |||||||||||||    
T  2404272 ccgatgtgggactctt-aacacacctc-tcacgaccagcactattgcgcttggttcgtggacataaacggtaggtggtccaatagcggaaacctgatagc 2404369  T
Q  361 aagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    | ||| || || | || || || ||||||||||| |||||||||||||    
T  2404370 aggtgacccaatggat-ttcgaagaggctctgataccatcttagaaat 2404416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 495
Target Start/End: Original strand, 10420916 - 10420954
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgat 495  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10420916 ccacttataaacacatgttcatgtcatattttatctgat 10420954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 507
Target Start/End: Complemental strand, 19065143 - 19065094
Alignment:
Q  458 cacttataaacacatgttcatgtcatattttatctgatgtgagactcttt 507  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  19065143 cacttataaatacatggtcaagtcatattttatctgatgtgagactcttt 19065094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 1936212 - 1936280
Alignment:
Q  263 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggt 331  Q
    |||||| |||||||||||||| ||| ||| ||||| ||||||||||| |||||| | ||||||||||||    
T  1936212 gatgtgtgactctttaacacacctcttcatgaccaacactattgggcatggttcgttgacataaatggt 1936280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 509
Target Start/End: Original strand, 10420714 - 10420766
Alignment:
Q  457 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 509  Q
    |||||||||||||||||||||||||||||||| |  ||||| |||||||||||    
T  10420714 ccacttataaacacatgttcatgtcatatttttttcgatgtaagactctttaa 10420766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 511
Target Start/End: Original strand, 21213075 - 21213159
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||| || |||||||||||||||||    |||||||||||||||||||||||  || |||||||||||| | || |||||||||    
T  21213075 caaaaccaacttgtgaggtgatgattactcccacttataaacacatgttcatgcaatcttttatctgatgcgggattctttaaca 21213159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 253
Target Start/End: Complemental strand, 20935237 - 20935118
Alignment:
Q  134 aatgattgttatgtgctttagcatgttctaggctttaactaaaactatttaaacatcatcaaagaaatctagataatgaacatcattaaaatacaatcct 233  Q
    ||||||||||| ||||||||   | ||||||||| ||||||| | ||| |||||||||| ||||  |||||| |||  |||| ||| |||| |||| |||    
T  20935237 aatgattgttaggtgctttaatgtattctaggctataactaacattatataaacatcataaaagtcatctagctaaaaaacaacatcaaaaaacaaacct 20935138  T
Q  234 agcactataagcaacttcag 253  Q
    | |||||||||||| |||||    
T  20935137 aacactataagcaatttcag 20935118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 299 - 408
Target Start/End: Original strand, 33996214 - 33996319
Alignment:
Q  299 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 398  Q
    |||||||||||||||||| ||||||||||||||| ||  ||| || |  |||||||||||||| |||||| || | |   |||| ||||||||||| |||    
T  33996214 cactattgggcttggttcgtggacataaatggtgggtggcccgattgcggaaacctgatagcaggtggcccaatgga---tgga-gaggctctgatacca 33996309  T
Q  399 tcttagaaat 408  Q
    ||||||||||    
T  33996310 tcttagaaat 33996319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 497
Target Start/End: Complemental strand, 2938009 - 2937947
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgt 497  Q
    |||||||||||||  ||| ||||||| |||||||||||||||| ||| ||||||||| |||||    
T  2938009 gcttgtgaggtgaatattgtctccacatataaacacatgttcaagtcgtattttatccgatgt 2937947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 18826352 - 18826421
Alignment:
Q  262 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||||||||||||| |||||| | ||||| ||||| ||| |||||||||||||| ||| |||||||||||    
T  18826352 cgatgtgagactctt-aacacatcccctcatgaccaacacaattgggcttggttcgtggtcataaatggtg 18826421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 21592570 - 21592668
Alignment:
Q  159 ttctaggctttaactaaaactatttaaacatcatcaaagaaatctagataatgaacatcattaaaatacaatcctagcactataagcaacttcagattt 257  Q
    ||||| ||| ||||||| | ||| |||||||||||||| ||| ||| |||||||||||||| |||| |||| ||||  |||| ||| ||||||| ||||    
T  21592570 ttctaagctataactaacaatatataaacatcatcaaataaacctatataatgaacatcatcaaaacacaaacctataactaaaagaaacttcatattt 21592668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 22339459 - 22339536
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcc-tcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||||||||||||| ||||||||||||| |||| ||| || || ||||||||||||| |||| ||||||| |||||||    
T  22339459 ttttgtccgatgtgaaactctttaacaca-ctccttcacgatcaacactattgggctttgttcgtggacattaatggtg 22339536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 511
Target Start/End: Complemental strand, 47849611 - 47849537
Alignment:
Q  437 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||| ||||  | | ||||||||||||||||||||| ||| ||||||| ||||||  |||||||||||    
T  47849611 ttgtgaggtgaggattgccccaacttataaacacatgttcatgccatcttttatccgatgtggcactctttaaca 47849537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 2315149 - 2315194
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||||    
T  2315149 cctcacgaccaacactattgggcttggttcgtggacataaatggtg 2315194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 430 - 511
Target Start/End: Original strand, 8125443 - 8125524
Alignment:
Q  430 aatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||| |||||||| || | ||||||  ||| |||||||||||| |||||| ||| |||||||||||||  ||||||||||||    
T  8125443 aatcggcttgtgatgtcaggatttttcccatttataaacacatattcatgccatcttttatctgatgttggactctttaaca 8125524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 408
Target Start/End: Original strand, 36993196 - 36993316
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| ||||||||||||||  |||| ||| || |||||||| ||| ||   |||||||  |||| ||||||||| |||||| || | ||||| || |||    
T  36993196 cctcacgaccagcactattgaacttgattcgtgaacataaatagtgggtggtccaatagcggaaatctgatagcacgtggcccaatggatctt-gaagag 36993294  T
Q  387 gctctgatgccatcttagaaat 408  Q
    |||||||| |||||||||||||    
T  36993295 gctctgataccatcttagaaat 36993316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 48661450 - 48661523
Alignment:
Q  294 accagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggc 367  Q
    |||| |||||||||||||||||| ||||||||||||||| ||  ||| | ||  |||||||||||||| |||||    
T  48661450 accaacactattgggcttggttcgtggacataaatggtgggtggcccgaaagcggaaacctgatagcaggtggc 48661523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 511
Target Start/End: Complemental strand, 2600657 - 2600609
Alignment:
Q  463 ataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||||||| |||||||| || |||||||||| ||||||||    
T  2600657 ataaacacatgttcatgccatattttctccgatgtgagacactttaaca 2600609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 511
Target Start/End: Original strand, 23794398 - 23794474
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||| ||||  | ||| ||||||||| ||||||||| ||| |||| | ||||||| ||||||||||||    
T  23794398 gcttgtgaggtgaggattgccaccatttataaacaaatgttcatgacatcttttgtttgatgtgtgactctttaaca 23794474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 24612838 - 24612763
Alignment:
Q  436 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||||||| |||  ||  ||||||||||||||| |||||   || ||||||| |||||||||||||||||||    
T  24612838 cttgtgaggtgaagatagtcctcacttataaacacatattcatacaatcttttatccgatgtgagactctttaaca 24612763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 31892429 - 31892358
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 506  Q
    ||||||||||||| |||| || ||||||||||| ||||  ||||||||| ||  ||| ||||||||||||||    
T  31892429 gcttgtgaggtgaagattgtccccacttataaatacattgtcatgtcatgttccatccgatgtgagactctt 31892358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 293 - 332
Target Start/End: Original strand, 35308275 - 35308314
Alignment:
Q  293 gaccagcactattgggcttggttcttggacataaatggtg 332  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  35308275 gaccagcactattgggcttggttcgtggacataaacggtg 35308314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 506
Target Start/End: Original strand, 40898749 - 40898828
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 506  Q
    ||||||| | |||| |||||| ||||  | |||||||||||||||| || ||||||| |||||| |||||| ||||||||    
T  40898749 caaaatcggtttgtaaggtgaggattgcccccacttataaacacatatttatgtcatcttttatttgatgtaagactctt 40898828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 472
Target Start/End: Complemental strand, 3393032 - 3392987
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacat 472  Q
    ||||||| |||||||||||||  |||||| ||||||||||||||||    
T  3393032 caaaatcggcttgtgaggtgagaattttccccacttataaacacat 3392987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 506
Target Start/End: Complemental strand, 4507221 - 4507136
Alignment:
Q  421 atccttcaaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 506  Q
    ||||| ||||| |||||||||| |||| |||| || ||||||||||||| ||   || | ||| || |||||||||||||||||||    
T  4507221 atcctacaaaaccagcttgtgaagtgaagattgtccccacttataaacatattagcaggccatcttgtatctgatgtgagactctt 4507136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 11473379 - 11473326
Alignment:
Q  458 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||||||| |||||||||| ||||||||| | || |||| ||||||||||    
T  11473379 cacttataaacatatgttcatgtaatattttatttaatatgagtctctttaaca 11473326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 14540864 - 14540905
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaat 328  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  14540864 cctcatgaccagcactattgggcttggtttgtggacataaat 14540905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 506
Target Start/End: Original strand, 35308190 - 35308259
Alignment:
Q  437 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 506  Q
    ||||||||||||||||  | ||||||||||||||||  ||||| ||| |  |||||||||||||| ||||    
T  35308190 ttgtgaggtgatgattgcccccacttataaacacattgtcatgacatctcctatctgatgtgagattctt 35308259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 511
Target Start/End: Complemental strand, 47849808 - 47849758
Alignment:
Q  459 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||||||||  ||||||||||| ||||||| |||||| ||||||||||||    
T  47849808 acttataaacac--gttcatgtcatcttttatccgatgtgggactctttaaca 47849758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 293 - 408
Target Start/End: Original strand, 39348246 - 39348361
Alignment:
Q  293 gaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctg 392  Q
    |||||||||||||||||||||||| ||||||||||||||| ||   || ||||  |||||||||||||| |||||| || | | ||||||||||||||||    
T  39348246 gaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctg 39348345  T
Q  393 atgccatcttagaaat 408  Q
    || |||||||||||||    
T  39348346 ataccatcttagaaat 39348361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 258 - 472
Target Start/End: Original strand, 4112635 - 4112850
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| |||||  | ||||| ||||| |||||||||||||||||| | ||||||||||||| ||    | ||||  ||||||||||    
T  4112635 tgtccgatgtgggactctt-aacaccccccctcacgaccaacactattgggcttggttcgttgacataaatggtgggtggttcgatagcggaaacctgat 4112733  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg--agcataactcatccttcaaaatcagcttgtgaggtgatgattt-t 454  Q
    |||| |||| | || | ||||||||| |||||||||| |||||||||||||||   || |||||||||||| |||| | | ||||||||||| |||||      
T  4112734 agcaggtggtccaatggatcttggag-aggctctgataccatcttagaaattggaggcctaactcatccttaaaaaccggtttgtgaggtgaggatttcc 4112832  T
Q  455 ctccacttataaacacat 472  Q
    | ||||||||||||||||    
T  4112833 ccccacttataaacacat 4112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 276 - 477
Target Start/End: Complemental strand, 369839 - 369635
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagt-ttcccaataggagaaacctgatagcaagtggccaaaaga 374  Q
    |||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   ||| ||||  ||||||||||||||  ||  | || |     
T  369839 ttaacacatcccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgaccccgatagcggaaacctgatagcagctgatccaatgg 369740  T
Q  375 atcttggaggaggctctgatgccatcttagaaattga-gcataactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacat 472  Q
    ||||| ||| |||||||||| ||||| |||||||||| |  |||||||||||| ||||| || ||||| |||||| ||||  | ||||||||||||||||    
T  369739 atcttagagtaggctctgataccatcctagaaattgaggtctaactcatccttacaaaaccatcttgtaaggtgaggattgcccccacttataaacacat 369640  T
Q  473 gttca 477  Q
     ||||    
T  369639 tttca 369635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 287 - 408
Target Start/End: Original strand, 2859515 - 2859635
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| |||| |||||||| |||| | |||||| || | ||||| || |||    
T  2859515 cctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcagaaacctaatagaaggtggcccaatggatctt-gaagag 2859613  T
Q  387 gctctgatgccatcttagaaat 408  Q
    ||||| || |||||||||||||    
T  2859614 gctctaataccatcttagaaat 2859635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 4112868 - 4113014
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||| ||||||||| ||||||||||||||| ||   |||||||  ||||||||||||    
T  4112868 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatag 4112966  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
       |||||  || | |||||||| ||||||| ||| |||||||||||||    
T  4112967 atggtggctcaatggatcttgga-gaggctccgataccatcttagaaat 4113014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 260 - 408
Target Start/End: Complemental strand, 35772251 - 35772105
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| |  ||||  ||| ||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||||    
T  35772251 tccgatgtgggactctt-aacacacccgctcacaaccggcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatag 35772153  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    ||  ||||| || | ||||| ||| |||||||||| |||||||||||||    
T  35772152 cagatggcccaatggatctt-gagaaggctctgataccatcttagaaat 35772105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 260 - 394
Target Start/End: Complemental strand, 25713380 - 25713248
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||  | ||||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||| ||||||    
T  25713380 tccgatgtgggactctt-aacaccccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacttgatag 25713282  T
Q  360 caagtggccaaaagaatcttggaggaggctctgat 394  Q
    || |||||| || | |||||||| |||||||||||    
T  25713281 caggtggcccaatggatcttgga-gaggctctgat 25713248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 408
Target Start/End: Complemental strand, 26177132 - 26176984
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 357  Q
    ||||||||||| ||||||| |||||| | | ||| ||||||||||||||| |||||||| |||| |||||||||| ||   || ||||  |||| |||||    
T  26177132 tgtccgatgtgggactctt-aacacaccccgtcacgaccagcactattggacttggttcgtggatataaatggtgggtggtccgatagcggaaatctgat 26177034  T
Q  358 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||| |||||| || | |||||||| |||||||||||  ||||||||||||    
T  26177033 agcaggtggcccaatggatcttgga-gaggctctgatatcatcttagaaat 26176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 260 - 410
Target Start/End: Complemental strand, 38668347 - 38668199
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| |  |||| |||||||| ||||||||||||||| |||||||||||| |  ||  ||| |||| ||||||||||||     
T  38668347 tccgatgtgggactctt-aacacacccactcacgaccagcaatattgggcttggttcatggacataaatgataggtgacccgatagcagaaacctgataa 38668249  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    || ||| || || | ||| |||| ||||||||||| |||||||||||||||    
T  38668248 caggtgacccaatggatcatgga-gaggctctgataccatcttagaaattg 38668199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 12325383 - 12325464
Alignment:
Q  250 tcagattttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggt 331  Q
    |||| ||||||  |||||||||||||||||||||   ||||| ||||| |||||||||||||||||| ||||||||||||||    
T  12325383 tcagcttttgtttgatgtgagactctttaacacacaccctcacgaccaacactattgggcttggttcgtggacataaatggt 12325464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 12376537 - 12376605
Alignment:
Q  263 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggt 331  Q
    |||||||||||||||||||||   ||||| ||||| |||||||||||||||||| ||||||||||||||    
T  12376537 gatgtgagactctttaacacacaccctcacgaccaacactattgggcttggttcgtggacataaatggt 12376605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 12376480 - 12376555
Alignment:
Q  436 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||| |||| ||||  | ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  12376480 cttgtgaagtgaagattgcccccacttataaacacatgttcatgtcatcttttgtttgatgtgagactctttaaca 12376555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 435 - 509
Target Start/End: Complemental strand, 49142995 - 49142921
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 509  Q
    ||||||||| ||| ||||  | ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  49142995 gcttgtgagctgaggattgcccccacttataaacacatgttcatgccatattttgtctgatgtgggactctttaa 49142921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 22095983 - 22096092
Alignment:
Q  122 acacaatgcgacaatgattgttatgtgctttagcatgttctaggcttt-aactaaaact-atttaaacatcatcaaagaaatctagataatgaacatcat 219  Q
    |||||||| |||||  |||| || | |||||| |||||||||| |||| || ||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  22095983 acacaatgagacaagaattgctaggagctttaacatgttctagacttttaagtaaaacttatttaaacatcatcaaagaaatctagctaataaacatcat 22096082  T
Q  220 taaaatacaa 229  Q
     |||| ||||    
T  22096083 caaaagacaa 22096092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 263 - 408
Target Start/End: Complemental strand, 35892275 - 35892132
Alignment:
Q  263 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 362  Q
    |||||| ||||||| |||||| |  |||| ||||||||| |||||||||  ||| ||||||||||||||| ||  ||| |||| |||||  |||||||||    
T  35892275 gatgtgggactctt-aacacaccctctcacgaccagcacaattgggcttaattcgtggacataaatggtgggtgccccgatagcagaaatatgatagcaa 35892177  T
Q  363 gtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||||| || ||||||| || ||| ||||||| || ||||||||||    
T  35892176 gtggcccaatgaatctt-gaagagactctgataccttcttagaaat 35892132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 427 - 511
Target Start/End: Complemental strand, 52907434 - 52907350
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||| ||||||||||||||| ||||  | |||||||||||||||||||||   ||||||||||| |||||| |||| |||||||    
T  52907434 caaaaccagcttgtgaggtgaggattgcccccacttataaacacatgttcaaaccatattttatccgatgtgggactatttaaca 52907350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 7307944 - 7307843
Alignment:
Q  259 gtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgata 358  Q
    |||||||||||||||||| || ||| | ||||| ||||| |||||||||  ||||||| ||||||||||||||| ||   |||||||  |||||||||||    
T  7307944 gtccgatgtgagactctt-aatacaccccctcacgaccaacactattggatttggttcgtggacataaatggtgggtggtccaatagcggaaacctgata 7307846  T
Q  359 gca 361  Q
    |||    
T  7307845 gca 7307843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 287 - 408
Target Start/End: Original strand, 4098291 - 4098411
Alignment:
Q  287 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 386  Q
    ||||| ||||| || ||||||||||||||| |||||||||| |||| ||  ||| |||| ||||||||||| ||| |||||| || | ||||| || |||    
T  4098291 cctcacgaccaacattattgggcttggttcgtggacataaagggtgggtggcccgatagcagaaacctgattgcaggtggcccaatggatctt-gaagag 4098389  T
Q  387 gctctgatgccatcttagaaat 408  Q
     ||||||| ||| |||||||||    
T  4098390 tctctgataccaacttagaaat 4098411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 25145582 - 25145728
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||||||||||| |||||| | ||||| |||||||||||||| ||||| ||| ||||||| ||||||| ||   || |||   ||||||||||||    
T  25145582 tccgatgtgagactctt-aacacaccccctcacgaccagcactattgagcttgattcgtggacattaatggtgggtggtccgataacggaaacctgatag 25145680  T
Q  360 caagt-ggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || || || ||| || |||||||| |||||||||||  ||||||||||||    
T  25145681 caggtgggtcaatag-atcttgga-gaggctctgatatcatcttagaaat 25145728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 299 - 408
Target Start/End: Complemental strand, 33156918 - 33156809
Alignment:
Q  299 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 398  Q
    |||||||||||||| ||| |||||||||||||||  |  ||| ||||  |||||||||||||| |||  | || | ||||||||| ||||||| || |||    
T  33156918 cactattgggcttgattcgtggacataaatggtggatggcccgatagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaatacca 33156819  T
Q  399 tcttagaaat 408  Q
    ||||||||||    
T  33156818 tcttagaaat 33156809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 8870786 - 8870857
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    ||||||||| ||||||| |||||| | ||||| ||||||||| |||||| ||||||| |||||||||||||||    
T  8870786 tccgatgtgggactctt-aacacaccccctcacgaccagcacaattgggtttggttcgtggacataaatggtg 8870857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 12325339 - 12325414
Alignment:
Q  436 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    ||||||| |||| ||||  | ||||||||||||||||||| ||||||  |||| | ||||||||||||||||||||    
T  12325339 cttgtgaagtgaagattgcccccacttataaacacatgtttatgtcagcttttgtttgatgtgagactctttaaca 12325414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 260 - 408
Target Start/End: Complemental strand, 38733369 - 38733227
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| ||| ||| ||||||||||||||||||| |||| | || |||||||||| ||      ||||  ||||||||||||    
T  38733369 tccgatgtgggactctt-aacacacctcttcacgaccagcactattgggcttagttcgtagatataaatggtgggt----ggatagcggaaacctgatag 38733275  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    || |||| | || | |||||||| ||| ||||||| |||||||||||||    
T  38733274 caggtggtccaatggatcttgga-gagactctgataccatcttagaaat 38733227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 260 - 410
Target Start/End: Complemental strand, 16163154 - 16163007
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| ||||||   ||||| |||||||||||| |||||||| || ||||||||||||||  ||  ||| ||||  ||||||||||||    
T  16163154 tccgatgtgggactctt-aacacacaccctcacgaccagcactat-gggcttggctcgtggacataaatggtaggtggcccgatagcggaaacctgatag 16163057  T
Q  360 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 410  Q
    || |||||| |  | |||||||| |||||| ||||  ||||||| ||||||    
T  16163056 caggtggcccattggatcttgga-gaggctttgatatcatcttaaaaattg 16163007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 408
Target Start/End: Complemental strand, 27413567 - 27413423
Alignment:
Q  262 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 361  Q
    ||||||| |||| ||||||||| |  |||| ||||| |||||||||||||| ||| ||||||||||||||| ||  ||| ||||  |||| |||||| ||    
T  27413567 cgatgtgggact-tttaacacaccctctcacgaccaacactattgggcttgattcgtggacataaatggtgggtggcccgatagcggaaatctgataaca 27413469  T
Q  362 agtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
     |||| | ||   |||||||| |||||||||||  ||||||||||||    
T  27413468 ggtggtctaatagatcttgga-gaggctctgatatcatcttagaaat 27413423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 514
Target Start/End: Original strand, 49316189 - 49316266
Alignment:
Q  437 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcata-ttttatctgatgtgagactctttaacaaat 514  Q
    ||||||| ||| |||| || ||||||||||||||||||||||| |||| |||| ||| ||||| |||||||||||||||    
T  49316189 ttgtgagatgaagattgtccccacttataaacacatgttcatgccatatttttttctaatgtg-gactctttaacaaat 49316266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 260 - 330
Target Start/End: Original strand, 51460179 - 51460248
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatgg 330  Q
    ||||||||| ||||||| |||||| | ||||| | ||||||| |||||||||||||||||| |||||||||    
T  51460179 tccgatgtgggactctt-aacacaccccctcacggccagcacaattgggcttggttcttgggcataaatgg 51460248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 9146646 - 9146718
Alignment:
Q  255 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaat 328  Q
    |||||||||||||| ||||| | |||||| | ||||| ||| |||||||||| ||||||||| |||||||||||    
T  9146646 ttttgtccgatgtgggactcgtgaacacacc-cctcacgactagcactattgagcttggttcgtggacataaat 9146718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 30370007 - 30369911
Alignment:
Q  311 tggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||||| ||||||||||||||| ||  ||| ||||  |||||||||||||| ||| || || | |||||||| ||||||||||| | |||||||||||    
T  30370007 tggttcgtggacataaatggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatcttgga-gaggctctgatacaatcttagaaat 30369911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 435 - 488
Target Start/End: Original strand, 42351902 - 42351955
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatatttt 488  Q
    ||||||||||||| |||   ||||||||||||||||||||||||| ||||||||    
T  42351902 gcttgtgaggtgaggatggcctccacttataaacacatgttcatgccatatttt 42351955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 435 - 512
Target Start/End: Complemental strand, 49868527 - 49868450
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    |||||| | ||||| ||| |||||||||||| |||||| |||||||||| ||||||  ||||  ||||||||||||||    
T  49868527 gcttgtaatgtgattattgtctccacttatatacacatattcatgtcattttttattcgatgcaagactctttaacaa 49868450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 409
Target Start/End: Original strand, 51460331 - 51460451
Alignment:
Q  288 ctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggagg 387  Q
    |||| ||| ||||| |||| | ||||||| |||||| |||||||| ||  ||| ||||  |||||||||||||| |||||| || | |||||||| ||||    
T  51460331 ctcacgactagcacaattgagtttggttcgtggacacaaatggtgggtcgcccgatagcggaaacctgatagcaggtggcccaatggatcttgga-gagg 51460429  T
Q  388 ctctgatgccatcttagaaatt 409  Q
    |||||||  ||| |||||||||    
T  51460430 ctctgatatcattttagaaatt 51460451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 5953685 - 5953749
Alignment:
Q  348 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattgag 412  Q
    ||||||||| |||| |||||| || | |||||||| ||||||||||| |||||||| ||||||||    
T  5953685 gaaacctgaaagcaggtggcctaacggatcttggatgaggctctgataccatcttaaaaattgag 5953749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 512
Target Start/End: Complemental strand, 26229605 - 26229533
Alignment:
Q  440 tgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 512  Q
    |||||||| ||||  || |||||||||||||||||||| | |||||||| ||||||||| |||| | ||||||    
T  26229605 tgaggtgaggattgccttcacttataaacacatgttcaagccatattttgtctgatgtgggactatgtaacaa 26229533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 366
Target Start/End: Original strand, 34264586 - 34264688
Alignment:
Q  263 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 362  Q
    ||||||||| |||| |||||| | ||||| |||||||||||||| ||||||||| | || ||||||||||  |  ||| ||||  ||||||||||||||     
T  34264586 gatgtgagattctt-aacacaccccctcacgaccagcactattgtgcttggttcgtcgatataaatggtggttgacccgatagcggaaacctgatagcat 34264684  T
Q  363 gtgg 366  Q
    ||||    
T  34264685 gtgg 34264688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 403
Target Start/End: Complemental strand, 52961554 - 52961428
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 375  Q
    |||||||| | ||||| ||| |||||||||| ||||| ||| || |||||| ||||| ||  ||| ||||  |||||||||||||| |||||| || | |    
T  52961554 ttaacacaccccctcacgactagcactattgagcttgtttcgtgtacataactggtgggtggcccgatagcggaaacctgatagcaggtggcccaatgga 52961455  T
Q  376 tcttggaggaggctctgatgccatctta 403  Q
    |||| || ||||||||||| ||| ||||    
T  52961454 tctt-gaagaggctctgataccaactta 52961428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 477
Target Start/End: Original strand, 31004471 - 31004521
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttca 477  Q
    ||||| ||||||||||||||| ||||  | |||||||||||||||||||||    
T  31004471 caaaaccagcttgtgaggtgaggattgcccccacttataaacacatgttca 31004521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 51459817 - 51459871
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatgg 330  Q
    |||||||| | ||||| ||||||||| |||||||||||||| | |||||||||||    
T  51459817 ttaacacaccccctcacgaccagcacaattgggcttggttcgtagacataaatgg 51459871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 488
Target Start/End: Original strand, 10991815 - 10991868
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatatttt 488  Q
    ||||||||||||| ||||  || |||||||||||||||||||||| || |||||    
T  10991815 gcttgtgaggtgaggattgccttcacttataaacacatgttcatgccacatttt 10991868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 361
Target Start/End: Complemental strand, 17208773 - 17208676
Alignment:
Q  264 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 361  Q
    |||||||| ||||| ||||| | ||||| | ||| ||||||||||||||||   |||| |||||||||| ||  ||| ||||  ||||||||||||||    
T  17208773 atgtgagattctttcacacaccccctcacgcccaacactattgggcttggtgggtggatataaatggtgggtggcccgatagcggaaacctgatagca 17208676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 495
Target Start/End: Complemental strand, 19622512 - 19622475
Alignment:
Q  458 cacttataaacacatgttcatgtcatattttatctgat 495  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  19622512 cacttataaacacatgttcatatcatcttttatctgat 19622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 472
Target Start/End: Original strand, 26347010 - 26347047
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacat 472  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  26347010 gcttgtgaggtgaggattgtctccacttataaacacat 26347047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 428 - 477
Target Start/End: Original strand, 31181548 - 31181597
Alignment:
Q  428 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttca 477  Q
    |||| ||||||||||||||| ||||  | |||||||||||||||||||||    
T  31181548 aaaaccagcttgtgaggtgaggattgcccccacttataaacacatgttca 31181597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 278 - 408
Target Start/End: Original strand, 5633 - 5762
Alignment:
Q  278 aacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatc 377  Q
    |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   || ||||  |||||||||||||| |||||  || | |||    
T  5633 aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatggatc 5732  T
Q  378 ttggaggaggctctgatgccatcttagaaat 408  Q
    ||||| ||||||||||| |||||||||||||    
T  5733 ttgga-gaggctctgataccatcttagaaat 5762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 428 - 503
Target Start/End: Complemental strand, 67327 - 67252
Alignment:
Q  428 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagact 503  Q
    |||| ||||||||||||||||||||  | |||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  67327 aaaaccagcttgtgaggtgatgattgcccccacttataaacacatgttcagatcatattttatttgatgcgagact 67252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 506
Target Start/End: Complemental strand, 67535 - 67456
Alignment:
Q  427 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 506  Q
    ||||||| | |||| |||||| ||||  | |||||||||||||||| || ||||||| |||||| |||||| ||||||||    
T  67535 caaaatcggtttgtaaggtgaggattgcccccacttataaacacatatttatgtcatcttttatttgatgtaagactctt 67456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 82065 - 81992
Alignment:
Q  258 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 332  Q
    |||| |||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| |||||||||||||||    
T  82065 tgtctgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcatggacataaatggtg 81992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 41270 - 41323
Alignment:
Q  458 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 511  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  41270 cacttataaacacatgttcatgtcatcttttgtctgatgtgaggctctttaaca 41323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 408
Target Start/End: Original strand, 41156 - 41214
Alignment:
Q  349 aaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 408  Q
    |||| |||||||| |||||| || ||||||||||| |||||||||| |||||||||||||    
T  41156 aaacttgatagcaggtggcccaatgaatcttggag-aggctctgataccatcttagaaat 41214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 276 - 383
Target Start/End: Complemental strand, 13305 - 13197
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaatagg-agaaacctgatagcaagtggccaaaaga 374  Q
    |||||||| | | ||| ||||| |||||||||||||||||| ||||||||||| ||| ||  |||||||||  |||||||||||||| |||| | || |     
T  13305 ttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaatgg 13206  T
Q  375 atcttggag 383  Q
    |||||||||    
T  13205 atcttggag 13197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 276 - 383
Target Start/End: Complemental strand, 10946 - 10838
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaatagg-agaaacctgatagcaagtggccaaaaga 374  Q
    |||||||| | | ||| ||||| |||||||||||||||||| ||||||||||| ||| ||  |||||||||  |||||||||||||| |||| | || |     
T  10946 ttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaatgg 10847  T
Q  375 atcttggag 383  Q
    |||||||||    
T  10846 atcttggag 10838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 276 - 383
Target Start/End: Complemental strand, 14612 - 14504
Alignment:
Q  276 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaatagg-agaaacctgatagcaagtggccaaaaga 374  Q
    |||||||| | | ||| ||||| |||||||||||||||||| ||||||||||| ||| ||  ||| |||||  |||||||||||||| |||| | || |     
T  14612 ttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatgg 14513  T
Q  375 atcttggag 383  Q
    |||||||||    
T  14512 atcttggag 14504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 302 - 472
Target Start/End: Complemental strand, 14484 - 14308
Alignment:
Q  302 tattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatct 401  Q
    ||||||||||| ||| ||||||||||||||  ||  ||| ||||  ||||||||||| ||  ||||| || | |||||||| ||||||||||| ||||||    
T  14484 tattgggcttgattcgtggacataaatggtaggtggcccgatagcggaaacctgataacatatggcccaatggatcttgga-gaggctctgataccatct 14386  T
Q  402 tagaaa------ttgagcataactc-atccttcaaaatcagcttgtgaggtgatgattttctccacttataaacacat 472  Q
    ||||||      ||| || |||| | | ||  ||||| | |||||||||||||||||| || ||||||||||||||||    
T  14385 tagaaaacgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgtccccacttataaacacat 14308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 402
Target Start/End: Complemental strand, 51481 - 51355
Alignment:
Q  275 tttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaaga 374  Q
    ||||||||| | |||||  |||| |||||||||||||||||| || ||||||||| |  ||  ||| |||| ||||||||||||||| | | || || |     
T  51481 tttaacacatcccctcacaaccaacactattgggcttggttcgtgaacataaatgataggtggcccgatagtagaaacctgatagcaggagacccaatgg 51382  T
Q  375 atcttggaggaggctctgatgccatctt 402  Q
    |||||||| || |||||||| |||||||    
T  51381 atcttgga-gaagctctgataccatctt 51355  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 409
Target Start/End: Original strand, 87665 - 87819
Alignment:
Q  254 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacc 353  Q
    |||||||||| ||||||||||||||||||| ||  | | |||||||||||||| || || |   |||| |||||||||| ||  ||| ||||  ||||||    
T  87665 attttgtccgctgtgagactctttaacacatct-tttacgaccagcactattgagcatgatgtgtggatataaatggtgggtgacccgatagtggaaacc 87763  T
Q  354 tgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt 409  Q
    |||||||| |||||| || |||| || ||| || || ||||  ||||||| |||||    
T  87764 tgatagcaggtggcccaatgaattttagagaagactttgatatcatcttaaaaatt 87819  T

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Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 435 - 509
Target Start/End: Original strand, 102184 - 102258
Alignment:
Q  435 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 509  Q
    ||||||||||||  ||||  | ||||||||||||||||||| | || ||||||| |||| ||||| |||||||||    
T  102184 gcttgtgaggtggcgattgcccccacttataaacacatgtttaggtaatattttgtctgctgtgaaactctttaa 102258  T

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Target: scaffold0729 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 260 - 366
Target Start/End: Complemental strand, 2716 - 2611
Alignment:
Q  260 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 359  Q
    ||||||||| ||||||| |||||| | ||||| || |||||||||| || ||||||| | ||||||||||| | ||  ||| ||||  ||||||||||||    
T  2716 tccgatgtgggactctt-aacacaccccctcacgatcagcactattaggtttggttcgtagacataaatggggggtggcccgatagcggaaacctgatag 2618  T
Q  360 caagtgg 366  Q
    || ||||    
T  2617 catgtgg 2611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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