View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19841_high_52 (Length: 229)
Name: NF19841_high_52
Description: NF19841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19841_high_52 |
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Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 8826370 - 8826566
Alignment:
| Q |
12 |
tcatcagtattaagcagcagattttttccatgtgcactgaaagagagttttggaattgttaaacataatgtgtggtccaatttagaatattcaaataaaa |
111 |
Q |
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| T |
8826370 |
tcatcagtattaagcagcagattttttccatgtgcactgaaagagagttttggaattgttaaacataatgtgtggtccaatttagaatattcaaataaaa |
8826469 |
T |
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| Q |
112 |
caattctcaaagagcaagtgaacaatgatggtctgcataatttctgtcctaaggtagtttttccactttttctattcctttcagatcacatttagga |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
8826470 |
caattctcaaagagcaagtgaacaatgatggtctgcataatttctgtcctaaggtagtttttccactttttctattccttccagatcacatttagga |
8826566 |
T |
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