View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19841_low_37 (Length: 274)
Name: NF19841_low_37
Description: NF19841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19841_low_37 |
 |  |
|
| [»] chr7 (15 HSPs) |
 |  |
|
| [»] chr1 (2 HSPs) |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 24283995 - 24284251
Alignment:
| Q |
18 |
gacaaaattacgtttgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttcttt |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24283995 |
gacaaaattacgtttgagagttatggtggataaagaaagtaacaaagttctatatcctgaagcagtgaaggattttgttgatgtcctcttcagcttcttt |
24284094 |
T |
 |
| Q |
118 |
accttgcccttagggactattgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaaa |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24284095 |
accttgcccttagggactattgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaaa |
24284194 |
T |
 |
| Q |
218 |
gatcttgatcaacaatatttatgcacaaatacctgcaaggaaatgctgctgcagcca |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24284195 |
gatcttgatcaacaatatttatgcacaaatacctgcaaggaaatgctgctgcagcca |
24284251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 270
Target Start/End: Complemental strand, 24232725 - 24232488
Alignment:
| Q |
32 |
tgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttagg |
131 |
Q |
| |
|
||||| || ||||||| ||||||| ||||||||| | |||||||| || | ||||||||| ||||||| |||||||||||||| || ||||| ||||| |
|
|
| T |
24232725 |
tgagaattttggtggacaaagaaaagaacaaagttgtgtatgctgaggctgggaaggatttcgttgatgctctcttcagcttcttaacattgcctttagg |
24232626 |
T |
 |
| Q |
132 |
gactattgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaaagatcttgatcaaca |
231 |
Q |
| |
|
||||||||||||| | || |||| ||||||||||||||||||| | || |||||||||||||||||| ||||||||||||| | ||||||||||||| |
|
|
| T |
24232625 |
gactattgcaagatttgtggctaaggactcaaatattgaagcag-tgaaatttggcagcattagctcattgtatcaaagtgtgtcaaatcttgatcaaca |
24232527 |
T |
 |
| Q |
232 |
atatttatgcacaaatacctgcaaggaaatgctgctgca |
270 |
Q |
| |
|
|||||| | | || ||| |||||||||||||| ||||| |
|
|
| T |
24232526 |
atatttgtcctcacttacttgcaaggaaatgctactgca |
24232488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 31 - 235
Target Start/End: Complemental strand, 24132662 - 24132459
Alignment:
| Q |
31 |
ttgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttag |
130 |
Q |
| |
|
||||||||| ||||||| ||| ||| | ||||||| | ||||||||||||| ||||||||||||||||| || ||||||||||| || ||||| |||| |
|
|
| T |
24132662 |
ttgagagttttggtggacaaacaaaagagcaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaacattgcctttag |
24132563 |
T |
 |
| Q |
131 |
ggactattgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaaagatcttgatcaac |
230 |
Q |
| |
|
| |||||||||||||| || || | || ||| |||||||||||| | | ||||||||||||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
24132562 |
gtactattgcaagacttgtggcaaaggagtcagatattgaagcag-tgatatttggcagcattaattcactgtatcaaagtgtgacagatcttgatcaac |
24132464 |
T |
 |
| Q |
231 |
aatat |
235 |
Q |
| |
|
||||| |
|
|
| T |
24132463 |
aatat |
24132459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 264
Target Start/End: Complemental strand, 24122231 - 24121999
Alignment:
| Q |
31 |
ttgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttag |
130 |
Q |
| |
|
|||||||| |||||||| ||||||| ||||||||| | ||||||||||||| ||||||||||||||||| || ||||||||||| ||||| || |||| |
|
|
| T |
24122231 |
ttgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattag |
24122132 |
T |
 |
| Q |
131 |
ggactattgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaaagatcttgatcaac |
230 |
Q |
| |
|
| |||||| ||||||| || |||| || ||| |||||||||||| | | ||||||||| | || |||| |||||||||||| |||||||||| ||| |
|
|
| T |
24122131 |
gtactatttcaagacttgtggctaaggagtcagatattgaagcag-tgagatttggcagcctgagtacactttatcaaagtgtatcagatcttgatgaac |
24122033 |
T |
 |
| Q |
231 |
aatatttatgcacaaatacctgcaaggaaatgct |
264 |
Q |
| |
|
| ||| |||| | ||||||||||| |||||||| |
|
|
| T |
24122032 |
actatctatggtccaatacctgcaaagaaatgct |
24121999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 264
Target Start/End: Complemental strand, 24151320 - 24151088
Alignment:
| Q |
31 |
ttgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttag |
130 |
Q |
| |
|
||||||||| |||| |||||||| | ||||||||||||| ||||| || | ||||||||||||||||| |||||||||||||| || || || |||| |
|
|
| T |
24151320 |
ttgagagttttggtcgataaagagaaaaacaaagttctattggctgaggctgggaaggattttgttgatgcactcttcagcttcttaacatttcctttag |
24151221 |
T |
 |
| Q |
131 |
ggactattgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaaagatcttgatcaac |
230 |
Q |
| |
|
| |||||||| |||||||| ||| ||| |||||||| |||||||| ||||| || || | || ||||| ||||||||||| ||||||||||||| || |
|
|
| T |
24151220 |
gtactattgctagactcgtggctgaagagtcaaatatcgaagcagtgaaattt-ggtagtttgagttcactatatcaaagtgtgaaagatcttgatccac |
24151122 |
T |
 |
| Q |
231 |
aatatttatgcacaaatacctgcaaggaaatgct |
264 |
Q |
| |
|
||||| |||| || |||||||||| |||||||| |
|
|
| T |
24151121 |
aatatctatggtcacatacctgcaaagaaatgct |
24151088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 264
Target Start/End: Complemental strand, 24146302 - 24146097
Alignment:
| Q |
58 |
aacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttagggactattgcaagactcgttgctacag |
157 |
Q |
| |
|
||||||||||| | ||| || |||| ||||||||||||||||| || || |||||||| | ||||| |||||||| ||||||| |||||| || | | |
|
|
| T |
24146302 |
aacaaagttctgtttgcagaggcaggaaaggattttgttgatgttcttttgagcttcttatcattgcctttagggaccattgcaaaactcgtggcaaagg |
24146203 |
T |
 |
| Q |
158 |
actcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaaagatcttgatcaacaatatttatgcacaaatacctgcaagg |
257 |
Q |
| |
|
|||||||||||||| ||| | || |||||||||||||||||| ||||||||||||| |||||||||| ||||||| | || || | |||||||||| |
|
|
| T |
24146202 |
actcaaatattgaatcag-tgaaatttggcagcattagctcattgtatcaaagtgtgtcagatcttgatacacaatatctttggtcacacacctgcaagg |
24146104 |
T |
 |
| Q |
258 |
aaatgct |
264 |
Q |
| |
|
||||||| |
|
|
| T |
24146103 |
aaatgct |
24146097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 213
Target Start/End: Complemental strand, 24154474 - 24154294
Alignment:
| Q |
32 |
tgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttagg |
131 |
Q |
| |
|
|||||||| ||||||| |||| || || |||||| | ||||||||||||| ||||||||| |||||||| || || |||||||| || ||||| ||||| |
|
|
| T |
24154474 |
tgagagttttggtggacaaagcgaggaaaaaagttgtttatgctgaagcagagaaggatttcgttgatgttctgttaagcttcttaacattgcctttagg |
24154375 |
T |
 |
| Q |
132 |
gactattgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgt |
213 |
Q |
| |
|
|||||||||||||| || ||| ||| || ||||||||||||||| ||||| |||||||| ||||||||||||||||| |
|
|
| T |
24154374 |
tactattgcaagacttgtatctaaagagtcgaatattgaagcagttaaatttaat-agcattagttcactgtatcaaagtgt |
24154294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 38 - 213
Target Start/End: Complemental strand, 24161381 - 24161207
Alignment:
| Q |
38 |
ttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttagggactat |
137 |
Q |
| |
|
|||||||||| |||||||| || ||||||||||||||||| || | ||||||||||| ||||| || ||||||||||| || || || |||||||||| |
|
|
| T |
24161381 |
ttatggtggacaaagaaaggaagaaagttctatatgctgaggctggaaaggattttgtcgatgttcttttcagcttcttgacattacctctagggactat |
24161282 |
T |
 |
| Q |
138 |
tgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgt |
213 |
Q |
| |
|
||| ||||| | ||| ||| |||||||| ||||||| | | |||||||||||||| |||||||| | |||||| |
|
|
| T |
24161281 |
tgcttgactcatatctaaagagtcaaatatggaagcag-tgaggtttggcagcattagttcactgtacctaagtgt |
24161207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 3495012 - 3494849
Alignment:
| Q |
49 |
aaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttagggactattgcaagactcg |
148 |
Q |
| |
|
|||||||| || | |||||| ||||||||||| | |||||||| || ||||| ||||| || ||||| || ||||| |||| |||||||||||| | | |
|
|
| T |
3495012 |
aaagaaagaaatagagttctgtatgctgaagccggtaaggatttcgtcgatgttctctttagtttcttaacattgcctctaggtactattgcaagattag |
3494913 |
T |
 |
| Q |
149 |
ttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgt |
213 |
Q |
| |
|
|| ||| || |||||||||||||||| | || ||||| |||||||||||||| ||||||||||| |
|
|
| T |
3494912 |
tttctaaggattcaaatattgaagcag-tgaaatttggtagcattagctcactatatcaaagtgt |
3494849 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 235
Target Start/End: Complemental strand, 24138568 - 24138392
Alignment:
| Q |
58 |
aacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttagggactattgcaagactcgttgctacag |
157 |
Q |
| |
|
||||||||||| | | |||| |||| ||||||||||||||||| || || || ||||| || || |||||||| ||||| ||| || |||| | || || |
|
|
| T |
24138568 |
aacaaagttctgtttactgaggcagataaggattttgttgatgttcttttgagtttcttaacattacccttaggtactatcgcaggaatcgtggataaag |
24138469 |
T |
 |
| Q |
158 |
actcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaaagatcttgatcaacaatat |
235 |
Q |
| |
|
| |||||||||||||||| | | ||||||||||| || ||||| ||||||||||| || |||||||||||||||| |
|
|
| T |
24138468 |
agtcaaatattgaagcag-tgagatttggcagcataagttcactctatcaaagtgtgtcagttcttgatcaacaatat |
24138392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 21194274 - 21194374
Alignment:
| Q |
31 |
ttgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttag |
130 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||| | |||||||| |||| |||||||||| |||| || || ||||||||||| || ||||| |||| |
|
|
| T |
21194274 |
ttgagggttatggtggacaaagaaaggaacaaagttttgtatgctgaggcagggaaggattttattgaagttctattcagcttcttaacattgcctttag |
21194373 |
T |
 |
| Q |
131 |
g |
131 |
Q |
| |
|
| |
|
|
| T |
21194374 |
g |
21194374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 24238059 - 24238173
Alignment:
| Q |
32 |
tgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttagg |
131 |
Q |
| |
|
|||||||||||||||| | |||| ||||||||| | |||||||| |||| ||||||||||| |||| |||||||| ||||| || ||||| ||||| |
|
|
| T |
24238059 |
tgagagttatggtggacggaaaaaggaacaaagttgtgtatgctgaggcaggcaaggattttgtcgatgctctcttcagtttcttaacattgcctttagg |
24238158 |
T |
 |
| Q |
132 |
gactattgcaagact |
146 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
24238159 |
aactattgcaagact |
24238173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 213
Target Start/End: Original strand, 21199526 - 21199668
Alignment:
| Q |
70 |
tatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttagggactattgcaagactcgttgctacagactcaaatattg |
169 |
Q |
| |
|
|||||||| |||| |||||||||||||||| |||||| ||||||| || ||||| ||||| |||||||||||||| || | || || ||||||| |
|
|
| T |
21199526 |
tatgctgaggcaggaaaggattttgttgatgctctcttcggcttcttaacattgcctttaggaactattgcaagactagtgtccgaggagtcgaatattg |
21199625 |
T |
 |
| Q |
170 |
aagcagttcaattttggcagcattagctcactgtatcaaagtgt |
213 |
Q |
| |
|
|||| | || |||||||||||||||||||||||||| ||||| |
|
|
| T |
21199626 |
aagc-tatgaaatttggcagcattagctcactgtatcagagtgt |
21199668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 264
Target Start/End: Original strand, 21194383 - 21194470
Alignment:
| Q |
177 |
tcaattttggcagcattagctcactgtatcaaagtgtaaaagatcttgatcaacaatatttatgcacaaatacctgcaaggaaatgct |
264 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||| | |||||||| |||||||| |||| || ||| |||||||||||||| |
|
|
| T |
21194383 |
tcaaatttggcagcattagctcactatatcaaagtgtggcaaatcttgatgaacaatatctatggactcgtacttgcaaggaaatgct |
21194470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 23342928 - 23342854
Alignment:
| Q |
72 |
tgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttagggactattgcaagact |
146 |
Q |
| |
|
||||||||||| ||||| ||||| ||||| || || |||||||| || ||||| ||||| |||||||||||||| |
|
|
| T |
23342928 |
tgctgaagcaggaaaggactttgtggatgttctgtttagcttcttaacattgcctttaggaactattgcaagact |
23342854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 10988794 - 10989015
Alignment:
| Q |
17 |
tgacaaaattacgtttgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctt |
116 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
10988794 |
tgacaaaattacgtt-gagagttaaggtggataaagaaagtaacaaagttctgtatgctgaggcagtgaaggatttcgttgatgttctcttcagcttctt |
10988892 |
T |
 |
| Q |
117 |
taccttgcccttagggactattgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaa |
216 |
Q |
| |
|
|| ||||| |||||||||||||| ||||| || |||||||| ||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| || |
|
|
| T |
10988893 |
aacattgcctttagggactattgcgagacttgtggctacagagtcaaatattgaagcagttcaa-tttggtagcattagttcactatatcaaagtgtgaa |
10988991 |
T |
 |
| Q |
217 |
agatcttgatcaacaatatttatg |
240 |
Q |
| |
|
|||||||||||| ||||||||||| |
|
|
| T |
10988992 |
agatcttgatcagcaatatttatg |
10989015 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 176
Target Start/End: Original strand, 28160506 - 28160617
Alignment:
| Q |
65 |
ttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttagggactattgcaagactcgttgctacagactcaaa |
164 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||| || || ||||||||||| ||||| | ||||| |||||| | ||||| || |||| || ||| | |
|
|
| T |
28160506 |
ttctgtatgctgaagcagggaaggattttgttggtgctcttttcagcttcttaaccttactgttaggtactatttctagacttgtggctaaggagtcaga |
28160605 |
T |
 |
| Q |
165 |
tattgaagcagt |
176 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
28160606 |
tattgacgcagt |
28160617 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 274
Target Start/End: Original strand, 3151053 - 3151294
Alignment:
| Q |
31 |
ttgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttag |
130 |
Q |
| |
|
|||||| |||||||||| |||||||| ||||| |||||||||||||| || | ||||||||| || ||||| || || || || || || || || ||| |
|
|
| T |
3151053 |
ttgagaattatggtggacaaagaaaggaacaa-gttctatatgctgaggctgggaaggatttcgtcgatgttcttttgagttttttaacattacctctag |
3151151 |
T |
 |
| Q |
131 |
ggactattgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaaagatcttgatcaac |
230 |
Q |
| |
|
||||||||||||||||| || || || ||||||||||||||||| || || |||||||| |||||| |||||| | ||||| ||||||||||||| |
|
|
| T |
3151152 |
ggactattgcaagactcatttctcaggagtcaaatattgaagcagtgaaactt-ggcagcataagctcattgtatcgaggtgtatcggatcttgatcaac |
3151250 |
T |
 |
| Q |
231 |
aatatttatgcacaaatacctgcaaggaaatgctgctgcagcca |
274 |
Q |
| |
|
||||| |||| || | | ||||| |||||||||||||||||| |
|
|
| T |
3151251 |
aatatctatggtcacaggcatgcaaagaaatgctgctgcagcca |
3151294 |
T |
 |
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Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 15380168 - 15380283
Alignment:
| Q |
31 |
ttgagagttatggtggataaagaaagtaacaaagttctatatgctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttag |
130 |
Q |
| |
|
|||||| |||||||||||| |||||| |||||||||||||||| || |||| |||||||||||||||| || ||||||||||| | || || |||| |
|
|
| T |
15380168 |
ttgagatttatggtggatagagaaaggaacaaagttctatatgtagaggcagggaaggattttgttgatactcttttcagcttcttaatatttcctttag |
15380267 |
T |
 |
| Q |
131 |
ggactattgcaagact |
146 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
15380268 |
ggactattgcaagact |
15380283 |
T |
 |
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