View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19843_low_13 (Length: 277)
Name: NF19843_low_13
Description: NF19843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19843_low_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 34078072 - 34078348
Alignment:
| Q |
1 |
ctacttccctcattttcttctcacaaccatgaggatcaatccacctccacattggtaggtggtcacctaaatatatcacaccaagtaaccaaaataattc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |
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| T |
34078072 |
ctacttccctcattttcttctcacaaccatgaggatcaatccacctccacattggtaagtagtcacctaaatatatcacaccaagtaaccaaaataattc |
34078171 |
T |
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| Q |
101 |
atgagttgtgtgcataaactccatagcttcttgtggccctgcagatttagaaccaaaatattgttttcctaacaacattctagtgacattgttcattgaa |
200 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34078172 |
atgagttatgtgcataaactccatagcttcttgtggccctgcagatttagaaccaaaatattgttttcctaacaacattctagtgacattgttcattgaa |
34078271 |
T |
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| Q |
201 |
aaagcacccaaaatttctcttaaattaatgggattttcgaaattggcccgtgcaaaaacatctctaacaagatgttg |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| |
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| T |
34078272 |
aaagcacccaaaatttctcttaaattaatgggattttcggatttggcccgtgcaaaaacatctttaacaagatgttg |
34078348 |
T |
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