View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19843_low_9 (Length: 373)
Name: NF19843_low_9
Description: NF19843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19843_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 9 - 357
Target Start/End: Complemental strand, 34078093 - 34077745
Alignment:
| Q |
9 |
gagaagaaaatgagggaagtagaaaaaagagttgatgactttcactccaaaattcttgaagaacatagaaaggcaaggaaagataagaaagggataggaa |
108 |
Q |
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| T |
34078093 |
gagaagaaaatgagggaagtagaaaaaagagttgatgactttcactccaaaattcttgaagaacatagaaaggcaaggaaagataagaaagggataggaa |
34077994 |
T |
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| Q |
109 |
aaagtgatgaagaacttgattttgtggatattttattgtctttgcctggtgaagatggaaaagagcatatggatgatgttgagataaaagctttgattca |
208 |
Q |
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| T |
34077993 |
aaagtgatgaagaacttgattttgtggatattttattgtctttgcctggtgaagatggaaaagagcatatggatgatgttgagataaaagctttgattca |
34077894 |
T |
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| Q |
209 |
ggtatgactttttctctattaattttgtttaatttttcatgtaatgattgaaaataatgtagttatactaaatatttaggacatgatcgcggctgcaacg |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077893 |
ggtatgactttttctctattaattttgtttaatttttcatgtaatgattgaaaataatgtagttatactaaatatttaggacatgatcgcggctgcaaca |
34077794 |
T |
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| Q |
309 |
gacacttcagccgttactaatgaatgggcgatgacagaggtaatcaaac |
357 |
Q |
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| T |
34077793 |
gacacttcagccgttactaatgaatgggcgatgacagaggtaatcaaac |
34077745 |
T |
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