View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19844_low_10 (Length: 234)
Name: NF19844_low_10
Description: NF19844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19844_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 36189661 - 36189532
Alignment:
| Q |
18 |
acagaagcgacattacccttaccgtaaagtacaagaagcaataagataaacacgtttactggtgaagatttttcacatagaaagaagtaattgacttgtg |
117 |
Q |
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| T |
36189661 |
acagaagcgacattacccttaccgtaaagtacaagaagcaataagatacacacgtttactggtgaagatttttcacttagaaagaagtaattgacttgtg |
36189562 |
T |
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| Q |
118 |
aaacatgaatatgatttgttcacattgttc |
147 |
Q |
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| T |
36189561 |
aaacatgaatatgatttgttcacattgttc |
36189532 |
T |
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