View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19845_high_11 (Length: 215)
Name: NF19845_high_11
Description: NF19845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19845_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 37609701 - 37609532
Alignment:
| Q |
19 |
attgtggcaaacagaataaagaaacagaggaaaacagagacattcggtgttctgttttcaacagaggccattgtgaccttgagaatttgaaaacacaaaa |
118 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |
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| T |
37609701 |
attgtggcaaacagaataaagaaacagaggaaaacagagacattcggtgttctgttttcaacataagccattgtgaccttgagaatttgaaaacacaaaa |
37609602 |
T |
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| Q |
119 |
ataagtaaaaggttatgcttgtattgagtctgctactaaattatatatgtcatattagagggtgtagaaa |
188 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37609601 |
ataagtaaaaggttatgcttgtattgagtctgctactaaattatatatgtcatattagagggtgtagaaa |
37609532 |
T |
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