View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19845_low_10 (Length: 254)
Name: NF19845_low_10
Description: NF19845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19845_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 19058133 - 19057907
Alignment:
| Q |
18 |
gtaatctgttttgaaaagaattaaagttgatctattttaaaataagtagacacttagtttttaaaaactaataaaataattttgttaaacaattgcttcc |
117 |
Q |
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| T |
19058133 |
gtaatctgttttgaaaagaattaaagttgatctattttaaaataagtagacacttagtttttaaaaacaaataaaataattttgttaaacaattgctttt |
19058034 |
T |
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| Q |
118 |
gttagtataacttttaaatcataatacatgttttgatttgtatacatactacattcaaccaaatcacacaatatatgtatacataatacaaaatatatat |
217 |
Q |
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| T |
19058033 |
gttagtataacttttaaatcataatacatgttttgatttgtatacatactacattcaaccaaatcactcaatatatgtatacataatacaaaatatatat |
19057934 |
T |
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| Q |
218 |
ttccttaaaattttatgatgtcctttg |
244 |
Q |
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| T |
19057933 |
ttccttaaaattttatgatgtcctttg |
19057907 |
T |
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