View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19848_low_22 (Length: 290)
Name: NF19848_low_22
Description: NF19848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19848_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 12 - 273
Target Start/End: Complemental strand, 43627804 - 43627543
Alignment:
| Q |
12 |
atgaagcttgatcccattttggtgatagttggtggcaatgaattgcttaaagatagggctgcaaattatgcaacaagattgaaaggaataggaaaagcca |
111 |
Q |
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| T |
43627804 |
atgaagcttgatcccattttggtgatagttggtggcaatgaattgcttaaagatagggctgcaaattatgcaacaagattgaaaggaataggaaaagaca |
43627705 |
T |
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| Q |
112 |
ttaaatacattgagtttgaggggtgtgaacatgggtttttcacgcatgattcatattcagaaactgcaaaagaggttctacatgtccttaaacaattcat |
211 |
Q |
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| T |
43627704 |
ttaaatacattgagtttgaggggtgtgaacatgggtttttcacgcatgattcatattcagaaactgcgaaagaggttctacatgtccttaaacaattcat |
43627605 |
T |
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| Q |
212 |
gcttcaaacttctacatatccttaagtaatccatatttttagcctatattaaaatagtttgt |
273 |
Q |
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| T |
43627604 |
gcttcaaacttctacatatccttaagtaatccatatttttagcctatattaaaacagtttgt |
43627543 |
T |
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