View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19848_low_25 (Length: 284)
Name: NF19848_low_25
Description: NF19848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19848_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 43438110 - 43438377
Alignment:
| Q |
1 |
tggctatatatcttagccctagctagctagtgtaattttttagaactatgaggttgtacaaactatcatgacaaataaatagcttgatacatttatcttc |
100 |
Q |
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| T |
43438110 |
tggctatatatcttagccctagctagctagtgtaattttttagaactatgaggttgtacaaactatcatgacaaataaatagcttgatacatttatcttt |
43438209 |
T |
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| Q |
101 |
taatgctgtcttaattaccattaggccttggctaaaaaagaaatatatatttgatattttttatcttatgtaaattacaaaaccaaatcatatatggtaa |
200 |
Q |
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| T |
43438210 |
taatgctgtcttaattaccattaggccttggctaaaaaagaaatatatatttgatattttttatcttatgtaaattacaaaaccaaatcatatatggtaa |
43438309 |
T |
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| Q |
201 |
aattgatcctacataatgaatgaatcattttgttttgtttctaatttcaggagagatcaccatcaatg |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43438310 |
aattgatcctacataatgaatgaatcattttgttttgtttctaatttcaggagagatcaccatcaatg |
43438377 |
T |
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