View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19848_low_8 (Length: 447)
Name: NF19848_low_8
Description: NF19848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19848_low_8 |
 | |
|
| [»] chr7 (16 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 381; Significance: 0; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 3 - 447
Target Start/End: Complemental strand, 24132670 - 24132226
Alignment:
| Q |
3 |
aagttaccttgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaacctt |
102 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
24132670 |
aagttaccttgagagttttggtggacaaacaaaagagcaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaacatt |
24132571 |
T |
|
| Q |
103 |
accattaggtactatttcaagacttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatctt |
202 |
Q |
| |
|
|| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24132570 |
gcctttaggtactattgcaagacttgtggcaaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatctt |
24132471 |
T |
|
| Q |
203 |
gatcaacaatatctatttaatcagacctgcaaagaaatgctactaacgcccagaaacttcgtggaaagttttattcagcatatgaaactgaatatagaca |
302 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
24132470 |
gatcaacaatatctatttaatcaaacctgcaaagaaatgctactaacgcccagaaacttcatggaaagtttaattcagcatatgaaactgaacatagaca |
24132371 |
T |
|
| Q |
303 |
acacacctgtgcagtattttgcatgcgaggactggcagttttgtaggggagatataagtgggacccgtgtaaccacttttaggaatcagaaatgcatttg |
402 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
24132370 |
acacacctgtgcagtattttgcatgcgaggactggcagttttgtaggggagatataagtgggacccgtgtaactacttttaggaatcagaaatgcatttg |
24132271 |
T |
|
| Q |
403 |
tggaaagcgtttgaatgcaccatctctctttcacgttgtcccgat |
447 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24132270 |
tggaaagcgtttgaatgcaccatctctctttcacgttgtcccgat |
24132226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 417
Target Start/End: Complemental strand, 24122241 - 24121825
Alignment:
| Q |
1 |
cgaagttaccttgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaacc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24122241 |
cgaagttaccttgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaacc |
24122142 |
T |
|
| Q |
101 |
ttaccattaggtactatttcaagacttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | | |||| ||||||||||| |||||| |
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|
| T |
24122141 |
ttaccattaggtactatttcaagacttgtggctaaggagtcagatattgaagcagtgagatttggcagcctgagtacactttatcaaagtgtatcagatc |
24122042 |
T |
|
| Q |
201 |
ttgatcaacaatatctatttaatcagacctgcaaagaaatgctactaacgcccagaaacttcgtggaaagttttattcagcatatgaaactgaatataga |
300 |
Q |
| |
|
||||| |||| ||||||| | |||||||||||||||||||| | || ||||||| |||| | | ||| || | ||||||||||| || |
|
|
| T |
24122041 |
ttgatgaacactatctatggtccaatacctgcaaagaaatgctactcaaccctagaaactcaatggaggcgtattgtcaacagctcaaactgaatattga |
24121942 |
T |
|
| Q |
301 |
caacacacctgtgcagtattttgcatgcgaggactggcagttttgtaggggagatataagtgggacccgtgtaaccacttttaggaatcagaaatgcatt |
400 |
Q |
| |
|
||||||||| |||||||||| ||||| |||||||||||| |||||||||| ||| | ||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
24121941 |
tgacacacctgcgcagtattttacatgcaaggactggcagtcttgtaggggatttattaatgggagccgtgtaaccacttatagaaatcagaaatgcatc |
24121842 |
T |
|
| Q |
401 |
tgtggaaagcgtttgaa |
417 |
Q |
| |
|
||||||| || |||||| |
|
|
| T |
24121841 |
tgtggaaggcttttgaa |
24121825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 21 - 214
Target Start/End: Complemental strand, 24232716 - 24232523
Alignment:
| Q |
21 |
tggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattaggtactatttc |
120 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||| || || ||||| |||||| | |
|
|
| T |
24232716 |
tggtggacaaagaaaagaacaaagttgtgtatgctgaggctgggaaggatttcgttgatgctctcttcagcttcttaacattgcctttagggactattgc |
24232617 |
T |
|
| Q |
121 |
aagacttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatcttgatcaacaatat |
214 |
Q |
| |
|
|||| ||||||||||||| ||| ||||||||||||||| |||||||||||||| ||| |||||||||||||| || ||||||||||||||||| |
|
|
| T |
24232616 |
aagatttgtggctaaggactcaaatattgaagcagtgaaatttggcagcattagctcattgtatcaaagtgtgtcaaatcttgatcaacaatat |
24232523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 260
Target Start/End: Complemental strand, 24151328 - 24151071
Alignment:
| Q |
3 |
aagttaccttgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaacctt |
102 |
Q |
| |
|
|||||||||||||||| |||| || ||||| | |||||||||| | | ||||| || |||||||||||||||||||| || |||||||||||||| || |
|
|
| T |
24151328 |
aagttaccttgagagttttggtcgataaagagaaaaacaaagttctattggctgaggctgggaaggattttgttgatgcactcttcagcttcttaacatt |
24151229 |
T |
|
| Q |
103 |
accattaggtactatttcaagacttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatctt |
202 |
Q |
| |
|
|| |||||||||||| | ||||| |||||| | |||||| |||| |||||||||| |||||| || | | |||||| ||||||||||||| ||||||| |
|
|
| T |
24151228 |
tcctttaggtactattgctagactcgtggctgaagagtcaaatatcgaagcagtgaaatttggtagtttgagttcactatatcaaagtgtgaaagatctt |
24151129 |
T |
|
| Q |
203 |
gatcaacaatatctatttaatcagacctgcaaagaaatgctactaacgcccagaaact |
260 |
Q |
| |
|
|||| ||||||||||| || |||||||||||||||||||| | ||| ||||||| |
|
|
| T |
24151128 |
gatccacaatatctatggtcacatacctgcaaagaaatgctacttaagccaagaaact |
24151071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 217
Target Start/End: Complemental strand, 24138585 - 24138389
Alignment:
| Q |
21 |
tggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattaggtactatttc |
120 |
Q |
| |
|
|||||||||| || | |||||||||| ||| | |||| |||| |||||||||||||||| |||||| || |||||||| ||||| ||||||||||| | |
|
|
| T |
24138585 |
tggtggacaaggagaaaaacaaagttctgtttactgaggcagataaggattttgttgatgttcttttgagtttcttaacattacccttaggtactatcgc |
24138486 |
T |
|
| Q |
121 |
aagacttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatcttgatcaacaatatcta |
217 |
Q |
| |
|
| || | |||| ||| |||||| ||||||||||||||| |||||||||||| | |||||| |||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
24138485 |
aggaatcgtggataaagagtcaaatattgaagcagtgagatttggcagcataagttcactctatcaaagtgtgtcagttcttgatcaacaatatcta |
24138389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 24284008 - 24284212
Alignment:
| Q |
11 |
ttgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattag |
110 |
Q |
| |
|
|||||||| |||||||| ||||||| ||||||||| | ||| ||||||||| ||||||||||||||||| || ||||||||||| ||||| || |||| |
|
|
| T |
24284008 |
ttgagagttatggtggataaagaaagtaacaaagttctatatcctgaagcagtgaaggattttgttgatgtcctcttcagcttctttaccttgcccttag |
24284107 |
T |
|
| Q |
111 |
gtactatttcaagacttgtggctaaggagtcagatattgaagcag-tgatatttggcagcattaattcactgtatcaaagtgtgacagatcttgatcaac |
209 |
Q |
| |
|
| |||||| ||||||| || |||| || ||| |||||||||||| | | ||||||||||||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
24284108 |
ggactattgcaagactcgttgctacagactcaaatattgaagcagttcaattttggcagcattagctcactgtatcaaagtgtaaaagatcttgatcaac |
24284207 |
T |
|
| Q |
210 |
aatat |
214 |
Q |
| |
|
||||| |
|
|
| T |
24284208 |
aatat |
24284212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 24154474 - 24154242
Alignment:
| Q |
12 |
tgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattagg |
111 |
Q |
| |
|
||||||| |||||||||||| | || |||||||| ||||||||||||| ||||||||| ||||||| ||| || ||||||||||| || || ||||| |
|
|
| T |
24154474 |
tgagagttttggtggacaaagcgaggaaaaaagttgtttatgctgaagcagagaaggatttcgttgatgttctgttaagcttcttaacattgcctttagg |
24154375 |
T |
|
| Q |
112 |
tactatttcaagacttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatcttgatcaacaa |
211 |
Q |
| |
|
||||||| |||||||||| |||| ||||| ||||||||||||| | |||| ||||||| |||||||||||||||||| |||||||| | || || |
|
|
| T |
24154374 |
tactattgcaagacttgtatctaaagagtcgaatattgaagcagttaaatttaatagcattagttcactgtatcaaagtgtttcagatcttaaagaagaa |
24154275 |
T |
|
| Q |
212 |
tatctatttaatcagacctgcaaagaaatgcta |
244 |
Q |
| |
|
||||||| ||| | | ||||||||||||||| |
|
|
| T |
24154274 |
tatctatggaataaagcttgcaaagaaatgcta |
24154242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 37 - 216
Target Start/End: Complemental strand, 24146303 - 24146124
Alignment:
| Q |
37 |
aaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattaggtactatttcaagacttgtggctaag |
136 |
Q |
| |
|
|||||||||| ||| ||| || ||||| |||||||||||||||| |||||| ||||||||| | || || ||||| || ||| ||| ||| ||||| ||| |
|
|
| T |
24146303 |
aaacaaagttctgtttgcagaggcaggaaaggattttgttgatgttcttttgagcttcttatcattgcctttagggaccattgcaaaactcgtggcaaag |
24146204 |
T |
|
| Q |
137 |
gagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatcttgatcaacaatatct |
216 |
Q |
| |
|
|| ||| |||||||| |||||| |||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
24146203 |
gactcaaatattgaatcagtgaaatttggcagcattagctcattgtatcaaagtgtgtcagatcttgatacacaatatct |
24146124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 24238059 - 24238263
Alignment:
| Q |
12 |
tgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattagg |
111 |
Q |
| |
|
||||||| ||||||||| | ||| |||||||||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||| || || ||||| |
|
|
| T |
24238059 |
tgagagttatggtggacggaaaaaggaacaaagttgtgtatgctgaggcaggcaaggattttgtcgatgctctcttcagtttcttaacattgcctttagg |
24238158 |
T |
|
| Q |
112 |
tactatttcaagacttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatcttgatcaacaa |
211 |
Q |
| |
|
|||||| ||||||||| ||||||| |||| |||| | ||| || | | |||| ||| | | ||||||| |||||||||| ||||||||||| ||||| |
|
|
| T |
24238159 |
aactattgcaagacttgcggctaagcagtcgaatatcggagctgtaacagttggaagcctgagttcactgcatcaaagtgtagcagatcttgatgaacaa |
24238258 |
T |
|
| Q |
212 |
tatct |
216 |
Q |
| |
|
||||| |
|
|
| T |
24238259 |
tatct |
24238263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 48 - 203
Target Start/End: Original strand, 21199524 - 21199679
Alignment:
| Q |
48 |
tgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattaggtactatttcaagacttgtggctaaggagtcagatat |
147 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| ||| |||||||||| || || ||||| |||||| ||||||| ||| | ||||||| |||| |
|
|
| T |
21199524 |
tgtatgctgaggcaggaaaggattttgttgatgctctcttcggcttcttaacattgcctttaggaactattgcaagactagtgtccgaggagtcgaatat |
21199623 |
T |
|
| Q |
148 |
tgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatcttg |
203 |
Q |
| |
|
|||||| ||| |||||||||||||| ||||||||||| |||||| || |||||| |
|
|
| T |
21199624 |
tgaagctatgaaatttggcagcattagctcactgtatcagagtgtggcaaatcttg |
21199679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 3495015 - 3494823
Alignment:
| Q |
26 |
gacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattaggtactatttcaagac |
125 |
Q |
| |
|
|||||||||| ||| | |||| ||||||||||||| || |||||||| || |||| ||| || || |||||||| || || ||||||||||| ||||| |
|
|
| T |
3495015 |
gacaaagaaagaaatagagttctgtatgctgaagccggtaaggatttcgtcgatgttctctttagtttcttaacattgcctctaggtactattgcaagat |
3494916 |
T |
|
| Q |
126 |
ttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatcttgatcaacaatatctat |
218 |
Q |
| |
|
| || ||||||| ||| ||||||||||||||| |||||| ||||||| ||||| |||||||||||| || | |||| ||||||||||||| |
|
|
| T |
3494915 |
tagtttctaaggattcaaatattgaagcagtgaaatttggtagcattagctcactatatcaaagtgtgtcaaaatttgaccaacaatatctat |
3494823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 24161379 - 24161198
Alignment:
| Q |
20 |
atggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattaggtactattt |
119 |
Q |
| |
|
|||||||||||||||| || |||||| | |||||||| || || ||||||||||| |||| ||||||||||||||| || ||||| |||| |||||| |
|
|
| T |
24161379 |
atggtggacaaagaaaggaagaaagttctatatgctgaggctggaaaggattttgtcgatgttcttttcagcttcttgacattacctctagggactattg |
24161280 |
T |
|
| Q |
120 |
caagacttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatct |
201 |
Q |
| |
|
| |||| | |||| |||||| |||| |||||||||| ||||||||||||| ||||||||| | ||||||| ||||||| |
|
|
| T |
24161279 |
cttgactcatatctaaagagtcaaatatggaagcagtgaggtttggcagcattagttcactgtacctaagtgtgtcagatct |
24161198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 21194266 - 21194378
Alignment:
| Q |
3 |
aagttaccttgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaacctt |
102 |
Q |
| |
|
||||||| ||||| || |||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||| | ||| |||||||||||||| || |
|
|
| T |
21194266 |
aagttacattgagggttatggtggacaaagaaaggaacaaagttttgtatgctgaggcagggaaggattttattgaagttctattcagcttcttaacatt |
21194365 |
T |
|
| Q |
103 |
accattaggtact |
115 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
21194366 |
gcctttaggtact |
21194378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 160 - 307
Target Start/End: Original strand, 21194387 - 21194534
Alignment:
| Q |
160 |
atttggcagcattaattcactgtatcaaagtgtgacagatcttgatcaacaatatctatttaatcagacctgcaaagaaatgctactaacgcccagaaac |
259 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||| || |||||||| |||||||||||| | || || ||||| ||||||||||| | ||| ||||| |
|
|
| T |
21194387 |
atttggcagcattagctcactatatcaaagtgtggcaaatcttgatgaacaatatctatggactcgtacttgcaaggaaatgctacttaggccaagaaat |
21194486 |
T |
|
| Q |
260 |
ttcgtggaaagttttattcagcatatgaaactgaatatagacaacaca |
307 |
Q |
| |
|
| | ||||||||| | |||| | |||||||||||||| ||| ||||| |
|
|
| T |
21194487 |
tccatggaaagttattgtcagaagatgaaactgaatatcgacgacaca |
21194534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 23342959 - 23342851
Alignment:
| Q |
21 |
tggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattaggtactatttc |
120 |
Q |
| |
|
||||| ||||||||| |||||||| ||| |||||||||||| ||||| ||||| |||| ||| || ||||||||||| || || ||||| |||||| | |
|
|
| T |
23342959 |
tggtgaacaaagaaaccaacaaagtcttgtttgctgaagcaggaaaggactttgtggatgttctgtttagcttcttaacattgcctttaggaactattgc |
23342860 |
T |
|
| Q |
121 |
aagacttgt |
129 |
Q |
| |
|
||||||||| |
|
|
| T |
23342859 |
aagacttgt |
23342851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 23348139 - 23348065
Alignment:
| Q |
52 |
tgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattaggtactatttcaagact |
126 |
Q |
| |
|
||||||||||||||| || ||||| |||| ||| || || |||||||| || |||||||| |||||| ||||||| |
|
|
| T |
23348139 |
tgctgaagcagggaaagactttgtcgatgttctatttagtttcttaacattgccattaggaactattgcaagact |
23348065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 6 - 260
Target Start/End: Original strand, 10988802 - 10989056
Alignment:
| Q |
6 |
ttaccttgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttacc |
105 |
Q |
| |
|
|||| |||||||| | |||||| ||||||| ||||||||| |||||||||| |||| ||||||||| ||||||| ||| |||||||||||||| || || |
|
|
| T |
10988802 |
ttacgttgagagttaaggtggataaagaaagtaacaaagttctgtatgctgaggcagtgaaggatttcgttgatgttctcttcagcttcttaacattgcc |
10988901 |
T |
|
| Q |
106 |
attaggtactatttcaagacttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatcttgat |
205 |
Q |
| |
|
||||| |||||| | ||||||||||||| |||||| ||||||||||||| |||||| ||||||| |||||| ||||||||||||| |||||||||| |
|
|
| T |
10988902 |
tttagggactattgcgagacttgtggctacagagtcaaatattgaagcagttcaatttggtagcattagttcactatatcaaagtgtgaaagatcttgat |
10989001 |
T |
|
| Q |
206 |
caacaatatctatttaatcagacctgcaaagaaatgctactaacgcccagaaact |
260 |
Q |
| |
|
|| |||||| ||| ||||| ||||||||| |||||||||| | ||| ||||||| |
|
|
| T |
10989002 |
cagcaatatttatggaatcaaacctgcaaaaaaatgctactgaagccaagaaact |
10989056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 28160509 - 28160679
Alignment:
| Q |
48 |
tgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaaccttaccattaggtactatttcaagacttgtggctaaggagtcagatat |
147 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
28160509 |
tgtatgctgaagcagggaaggattttgttggtgctcttttcagcttcttaaccttactgttaggtactatttctagacttgtggctaaggagtcagatat |
28160608 |
T |
|
| Q |
148 |
tgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatcttgatcaacaatatctat |
218 |
Q |
| |
|
||| ||||||| |||||||||| | | | ||||| |||| || || ||||||||||| ||| ||||||| |
|
|
| T |
28160609 |
tgacgcagtgaaatttggcagcctgagtacactgcatcatagcgtctcagatcttgatgaactctatctat |
28160679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 15380158 - 15380322
Alignment:
| Q |
1 |
cgaagttaccttgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaacc |
100 |
Q |
| |
|
|||||||| ||||||| | |||||||| | ||||| ||||||||| | |||| || ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
15380158 |
cgaagttagcttgagatttatggtggatagagaaaggaacaaagttctatatgtagaggcagggaaggattttgttgatactcttttcagcttcttaata |
15380257 |
T |
|
| Q |
101 |
ttaccattaggtactatttcaagacttgtggctaaggagtcagatattgaagcagtgatatttgg |
165 |
Q |
| |
|
|| || ||||| |||||| ||||||||| ||||||||||||| |||| || ||||||| |||||| |
|
|
| T |
15380258 |
tttcctttagggactattgcaagacttgcggctaaggagtcaaatatcgacgcagtgaaatttgg |
15380322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 218
Target Start/End: Original strand, 3151045 - 3151259
Alignment:
| Q |
3 |
aagttaccttgagagtcatggtggacaaagaaataaacaaagttgtgtatgctgaagcagggaaggattttgttgatgctcttttcagcttcttaacctt |
102 |
Q |
| |
|
|||||| ||||||| | |||||||||||||||| ||||| ||| | |||||||| || ||||||||||| || |||| |||||| || || ||||| || |
|
|
| T |
3151045 |
aagttagcttgagaattatggtggacaaagaaaggaacaa-gttctatatgctgaggctgggaaggatttcgtcgatgttcttttgagttttttaacatt |
3151143 |
T |
|
| Q |
103 |
accattaggtactatttcaagacttgtggctaaggagtcagatattgaagcagtgatatttggcagcattaattcactgtatcaaagtgtgacagatctt |
202 |
Q |
| |
|
||| |||| |||||| ||||||| | || |||||||| ||||||||||||||| | |||||||||| | ||| |||||| | |||| | |||||| |
|
|
| T |
3151144 |
acctctagggactattgcaagactcatttctcaggagtcaaatattgaagcagtgaaacttggcagcataagctcattgtatcgaggtgtatcggatctt |
3151243 |
T |
|
| Q |
203 |
gatcaacaatatctat |
218 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
3151244 |
gatcaacaatatctat |
3151259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 1157443 - 1157403
Alignment:
| Q |
89 |
agcttcttaaccttaccattaggtactatttcaagacttgt |
129 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
1157443 |
agcttcttaaccttaccattaggtaccattgcaagacttgt |
1157403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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