View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1984_high_15 (Length: 231)
Name: NF1984_high_15
Description: NF1984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1984_high_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 10285028 - 10284800
Alignment:
| Q |
1 |
aacattaataatttgagaaaattaaagtaattgaacttaataacgtgtcggtgcatgtaggtgtcaaacaccaacgtgtgtatgatacgagacacaagtt |
100 |
Q |
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| T |
10285028 |
aacattaatagtttgagaaaattaaagtaattgaacttaataacgtgtcggtgcatgtaggtgtcaaacaccaacgtgtgtatgatacgagacacaagtt |
10284929 |
T |
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| Q |
101 |
caatctgaagtgtgtggtgtccaacacacacatcaatatttgacattgacacgacagtaacacatgagattacattcaatcattttcagtttttaaatat |
200 |
Q |
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| T |
10284928 |
caatctgaagtgtgtggtgtcta--acacacgtaaatatttgacattgacacgacactaacacatgagattacattcaatcactttcagttttcaaatat |
10284831 |
T |
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| Q |
201 |
tttcggtatttacatgttggtatccgtgctt |
231 |
Q |
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| T |
10284830 |
tattggtatttacatgttggtatccatgctt |
10284800 |
T |
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