View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19855_low_6 (Length: 413)
Name: NF19855_low_6
Description: NF19855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19855_low_6 |
 |  |
|
| [»] scaffold0753 (1 HSPs) |
 |  |  |
|
| [»] scaffold0008 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 151; Significance: 9e-80; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 21086597 - 21086427
Alignment:
| Q |
1 |
tcgtggatggacagtgtcgttgaccaatacaaaggaaataattttcgatatatatgttttattacattagagtttaaaattaaatcacacttgacagagg |
100 |
Q |
| |
|
|||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21086597 |
tcgtggatggacggtgttgttgaccaatgaaaaggaaataattttcgatatatatgttttattacattagagtttaaaattaaatcacacttgacagagg |
21086498 |
T |
 |
| Q |
101 |
aacgatgaatgatctcttatatttggaaaactcctcaaagtggaaaatgaaaagaaaaagtggtcgaaaat |
171 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21086497 |
aacgatgaatgatctcttatatttggaaaactcctcaaagtggaaaatgagaagaaaaagtggtcgaaaat |
21086427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 200 - 383
Target Start/End: Complemental strand, 21086394 - 21086213
Alignment:
| Q |
200 |
ttaattgttaaaaaaccaaatagaattaatagagtttaagctgttttaaattacaagggaggtgcttgtcaatttgataacaaaataagggagattggtg |
299 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
21086394 |
ttaatagttaaaaaaacaaatagaattaatagagtttaagctgtgttaaattacaagggaggtgcttgtcaatttgataacaaaatacgggagattg--g |
21086297 |
T |
 |
| Q |
300 |
tttttagttaaatagtaaaaaataaagaaggtgtttgtgttatttaagaagaccttgaacgaggttggtctaatttgctcatga |
383 |
Q |
| |
|
| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21086296 |
tctttagttaaatagtaaaaaatagaggaggtgtttgtgttatttaagaagaccttgaacgaggttggtctaatttgctcatga |
21086213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 18193038 - 18193120
Alignment:
| Q |
3 |
gtggatggacagtgtcgttgaccaatacaaaggaaataattttcgatatatatgttttattacattagagttt-aaaattaaa |
84 |
Q |
| |
|
||||||||||| ||| ||||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
18193038 |
gtggatggacattgtggttgatcaatgaaaaggaaataattttcgatatactcgttttattacattagagtttgaaaattaaa |
18193120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 19277785 - 19277710
Alignment:
| Q |
4 |
tggatggacagtgtcgttgaccaatacaaaggaaataattttcgatatatatgttttattacattagagtttaaaa |
79 |
Q |
| |
|
|||||||||| ||| ||||| |||| |||||||||||| |||||||||| | |||||||| |||||||||||||| |
|
|
| T |
19277785 |
tggatggacattgtggttgatcaatgaaaaggaaataatcttcgatatatctattttattatattagagtttaaaa |
19277710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 27082121 - 27082068
Alignment:
| Q |
153 |
agaaaaagtggtcgaaaattaagggagtttatactcgtatgaagaagttaattg |
206 |
Q |
| |
|
||||||| || | |||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
27082121 |
agaaaaaatgattgaaaattaagcgagttcatactcgtatgaagaagttaattg |
27082068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 55350408 - 55350456
Alignment:
| Q |
254 |
aagggaggtgcttgtcaatttgataacaaaataagggagattggtgttt |
302 |
Q |
| |
|
|||||||||| ||||| ||||||||||||| |||||||| || |||||| |
|
|
| T |
55350408 |
aagggaggtgtttgtccatttgataacaaagtaagggaggttagtgttt |
55350456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0753 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0753
Description:
Target: scaffold0753; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 136 - 377
Target Start/End: Complemental strand, 3635 - 3404
Alignment:
| Q |
136 |
caaagtggaaaatgaaaagaaaaagtggtcgaaaattaagggagtttatactcgtatgaagaagttaattgttaaaaaaccaaatagaattaatagagtt |
235 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||| || || ||||||||||||| |||||||||| ||||| | ||||||||| ||| |||||| |
|
|
| T |
3635 |
caaagtggaaaatggaaagaaaaagtggttaaaaattaagagatttcatactcgtatgaaaaagttaattgctaaaaca-caaatagaagtaacagagtt |
3537 |
T |
 |
| Q |
236 |
taagctgttttaaattacaagggaggtgcttgtcaatttgataacaaaataagggagattggtgtttttagttaaatagtaaaaaataaagaaggtgttt |
335 |
Q |
| |
|
||| || | |||||||| | |||||||| || ||||||||||||| |||||| ||||| | ||| |||||| |||||||||||||| ||||| |
|
|
| T |
3536 |
taaactctgttaaattatacgggaggtgattctcaatttgataacgaaataaaggagaatagtg--tttagt-------taaaaaataaagaatatgttt |
3446 |
T |
 |
| Q |
336 |
gtgttatttaagaagaccttgaacgaggttggtctaatttgc |
377 |
Q |
| |
|
|||||| ||||||||||||| | |||||| ||||||||||| |
|
|
| T |
3445 |
gtgttacttaagaagaccttaagtgaggttagtctaatttgc |
3404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 136 - 377
Target Start/End: Original strand, 9243367 - 9243598
Alignment:
| Q |
136 |
caaagtggaaaatgaaaagaaaaagtggtcgaaaattaagggagtttatactcgtatgaagaagttaattgttaaaaaaccaaatagaattaatagagtt |
235 |
Q |
| |
|
||||||| ||||| |||||||||||||| |||||||||| ||||| ||||||||||||| |||||||||| |||| || |||||||||||| |||||| |
|
|
| T |
9243367 |
caaagtgtaaaatcgaaagaaaaagtggttgaaaattaagagagttcatactcgtatgaaaaagttaattgctaaataa-taaatagaattaacagagtt |
9243465 |
T |
 |
| Q |
236 |
taagctgttttaaattacaagggaggtgcttgtcaatttgataacaaaataagggagattggtgtttttagttaaatagtaaaaaataaagaaggtgttt |
335 |
Q |
| |
|
||| | || |||||||| | |||| ||| || |||||||||||| |||||| ||||| | ||| |||||| |||||||||||| ||||| |
|
|
| T |
9243466 |
taaaccgtgttaaattatatgggaagtgattctcaatttgataatgaaataaaggagaatagtg--tttagt-------taaaaaataaagggtatgttt |
9243556 |
T |
 |
| Q |
336 |
gtgttatttaagaagaccttgaacgaggttggtctaatttgc |
377 |
Q |
| |
|
|||||| ||||||||||||| | |||||| ||||||||||| |
|
|
| T |
9243557 |
gtgttaattaagaagaccttaagtgaggttagtctaatttgc |
9243598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 284
Target Start/End: Original strand, 27432821 - 27432967
Alignment:
| Q |
136 |
caaagtggaaaatgaaaagaaaaagtggtcgaaaattaagggagtttatactcgtatgaagaagttaattgttaaaaaaccaaatagaattaatagagtt |
235 |
Q |
| |
|
||||||| ||||| ||||||||| |||| |||| |||| ||||| |||||||||||||||||||||||| | ||||| |||| ||||||||| |||| |
|
|
| T |
27432821 |
caaagtgaaaaatagaaagaaaaaaaggtcaaaaactaagtgagttcatactcgtatgaagaagttaattgctcaaaaa--aaatggaattaataaagtt |
27432918 |
T |
 |
| Q |
236 |
taagctgttttaaattacaagggaggtgcttgtcaatttgataacaaaa |
284 |
Q |
| |
|
||| |||| ||| |||| | |||||||||||||||||||||||| |||| |
|
|
| T |
27432919 |
taaactgtgttatattatatgggaggtgcttgtcaatttgataaaaaaa |
27432967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 13961185 - 13961244
Alignment:
| Q |
155 |
aaaaagtggtcgaaaattaagggagtttatactcgtatgaagaagttaattgttaaaaaa |
214 |
Q |
| |
|
||||| |||| ||||||||| |||||| |||||||||| ||||||||||| || |||||| |
|
|
| T |
13961185 |
aaaaaatggttgaaaattaaaggagttcatactcgtataaagaagttaatggtaaaaaaa |
13961244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 11960196 - 11960148
Alignment:
| Q |
254 |
aagggaggtgcttgtcaatttgataacaaaataagggagattggtgttt |
302 |
Q |
| |
|
||||| |||| || ||||||||||||||||||||||||| || |||||| |
|
|
| T |
11960196 |
aagggtggtgtttttcaatttgataacaaaataagggaggtttgtgttt |
11960148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 276
Target Start/End: Complemental strand, 11992849 - 11992725
Alignment:
| Q |
150 |
aaaagaaaaagtggtcgaaaattaagggagtttatactcgtatgaagaagttaattgttaaaaaaccaaatagaattaatagagtttaagctgttttaaa |
249 |
Q |
| |
|
|||||||||| || |||||||||||| ||||| |||||||||||||||||||||||| | || || |||| ||||||| | ||||||| | || ||||| |
|
|
| T |
11992849 |
aaaagaaaaaatgatcgaaaattaagtgagttcatactcgtatgaagaagttaattgctcaagaa--aaatggaattaacaaagtttaaaccgtattaaa |
11992752 |
T |
 |
| Q |
250 |
ttacaagggaggtgcttgtcaatttga |
276 |
Q |
| |
|
||| |||| | |||||||||||||||| |
|
|
| T |
11992751 |
ttataaggcaagtgcttgtcaatttga |
11992725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 7958625 - 7958547
Alignment:
| Q |
137 |
aaagtggaaaatgaaaagaaaaagtggtcgaaaa-ttaagggagtttatactcgtatgaagaagttaattgttaaaaaa |
214 |
Q |
| |
|
|||||| |||||| ||||||||| |||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
7958625 |
aaagtgaaaaatggaaagaaaaaatggtcgaaaaattaagtgagtttatactcgtatggagaagttaattgctaaaaaa |
7958547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 7958746 - 7958660
Alignment:
| Q |
3 |
gtggatggacagtgtcgttgaccaatacaaaggaaataattttcgatatatatgttttattacattagagttt-aaaattaaatcac |
88 |
Q |
| |
|
||||||||||| || ||||| |||| |||| ||||||| || ||||||| ||||||||| |||||||||| ||||||||||||| |
|
|
| T |
7958746 |
gtggatggacattgcagttgatcaatgaaaagaaaataatctttgatatatccgttttattatattagagtttaaaaattaaatcac |
7958660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 11992962 - 11992898
Alignment:
| Q |
25 |
caatacaaaggaaataattttcgatatatatgttttattacattagagttt-aaaattaaatcac |
88 |
Q |
| |
|
||||| |||||||||||| |||||| ||| ||||||| |||||||||||| ||||||||| ||| |
|
|
| T |
11992962 |
caataaaaaggaaataatcttcgatgtatccgttttatcacattagagtttaaaaattaaaccac |
11992898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 2015283 - 2015369
Alignment:
| Q |
31 |
aaaggaaataattttcgatatatatgttttattacattagagtttaaaattaaatcacacttgacagaggaacgatgaatgatctctt |
118 |
Q |
| |
|
|||||||||||| |||||||||| | |||||||| ||||||||||||||||||| |||| |||||| |||||| |||| ||||||||| |
|
|
| T |
2015283 |
aaaggaaataatcttcgatatatctattttattaaattagagtttaaaattaaaccaca-ttgacaaaggaacaatgagtgatctctt |
2015369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 8650617 - 8650518
Alignment:
| Q |
19 |
gttgaccaatacaaaggaaataattttcgatatatatgttttattacattagagttt-aaaattaaatcacacttgacagaggaacgatgaatgatctct |
117 |
Q |
| |
|
|||||| |||| |||||||||||| ||||||||| |||||||||| |||||||||| ||||||||| |||| ||| || |||||| |||| |||||||| |
|
|
| T |
8650617 |
gttgactaataaaaaggaaataatcatcgatatatctgttttattaaattagagtttaaaaattaaaccaca-ttgccaaaggaacaatgagtgatctct |
8650519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 11671428 - 11671352
Alignment:
| Q |
3 |
gtggatggacagtgtcgttgaccaatacaaaggaaataattttcgatatatatgttttattacattagagtttaaaa |
79 |
Q |
| |
|
|||||||| || ||| ||||| |||| ||| |||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
11671428 |
gtggatgggcattgtggttgatcaatgaaaaagaaataatctttgatatatatgttttattacattagagtttaaaa |
11671352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 11669801 - 11669739
Alignment:
| Q |
144 |
aaaatgaaaagaaaaagtggtcgaaaattaagggagtttatactcgtatgaagaagttaattg |
206 |
Q |
| |
|
|||||| ||||||||| |||||||| || ||| ||||| |||||||||||||||||||||||| |
|
|
| T |
11669801 |
aaaatggaaagaaaaaatggtcgaatatgaagtgagttcatactcgtatgaagaagttaattg |
11669739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 8271020 - 8271095
Alignment:
| Q |
3 |
gtggatggacagtgtcgttgaccaatacaaaggaaataattttcgatatatatgttttattacattagagtttaaaa |
79 |
Q |
| |
|
||||||||||| ||| ||||| |||| ||||||||||| ||| ||||||| ||||||||||||||| |||||||| |
|
|
| T |
8271020 |
gtggatggacattgtggttgatcaatgaaaaggaaataacttt-gatatatccgttttattacattagtgtttaaaa |
8271095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 49003936 - 49003868
Alignment:
| Q |
138 |
aagtggaaaatgaaaagaaaaagtggtcgaaaattaagggagtttatactcgtatgaagaagttaattg |
206 |
Q |
| |
|
||||| |||||| ||||||||| || || |||||||| ||||| |||||| ||||||||||||||||| |
|
|
| T |
49003936 |
aagtgaaaaatggaaagaaaaaatgatccgaaattaagtgagttcatactcttatgaagaagttaattg |
49003868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 49004059 - 49003983
Alignment:
| Q |
3 |
gtggatggacagtgtcgttgaccaatacaaaggaaataattttcgatatatatgttttattacattagagtttaaaa |
79 |
Q |
| |
|
||||| ||||| ||| ||||| ||||| ||| || ||||| || ||||||| ||||||||||||||| ||||||||| |
|
|
| T |
49004059 |
gtggaaggacattgtggttgatcaataaaaacgatataatctttgatatatctgttttattacattaaagtttaaaa |
49003983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 273
Target Start/End: Original strand, 10423036 - 10423171
Alignment:
| Q |
137 |
aaagtggaaaatgaaaagaaaaagtggtcgaaaa-ttaagggagtttatactcgtatgaagaagtt-aattgttaaaaaaccaaatagaattaatagagt |
234 |
Q |
| |
|
|||||| |||||| ||||||||| |||||||||| ||||| ||||||||||||||||| ||||||| ||||| |||||| |||||||||||| ||| |
|
|
| T |
10423036 |
aaagtgaaaaatggaaagaaaaaatggtcgaaaaattaagtgagtttatactcgtatggagaagttaaattgctaaaaa---aaatagaattaacgaagt |
10423132 |
T |
 |
| Q |
235 |
ttaagctgttttaaattacaagggaggtgcttgtcaatt |
273 |
Q |
| |
|
|||| || ||| |||| | |||| ||||||||||||| |
|
|
| T |
10423133 |
ttaaaacgtgttatattataggggaagtgcttgtcaatt |
10423171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 295
Target Start/End: Complemental strand, 20480690 - 20480553
Alignment:
| Q |
155 |
aaaaagtggtcgaaaattaagggagtttatactcgtatgaagaagttaattgttaaaaaaccaaatagaattaatagagtttaagctgttttaaattaca |
254 |
Q |
| |
|
||||| |||| | |||||||||||||| |||||||||| ||||||||||||| ||||||| ||| ||||||| | | |||| | || |||||||| | |
|
|
| T |
20480690 |
aaaaaatggttgcaaattaagggagttcatactcgtataaagaagttaattgctaaaaaa---aatggaattaacaaggcttaaaccgtgttaaattata |
20480594 |
T |
 |
| Q |
255 |
agggaggtgcttgtcaatttgataacaaaataagggagatt |
295 |
Q |
| |
|
| ||| | |||||||| ||| ||| | |||||||||||||| |
|
|
| T |
20480593 |
acggaagagcttgtcattttcatagctaaataagggagatt |
20480553 |
T |
 |
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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 10422915 - 10423001
Alignment:
| Q |
3 |
gtggatggacagtgtcgttgaccaatacaaaggaaataattttcgatatatatgttttattacattagagttt-aaaattaaatcac |
88 |
Q |
| |
|
||||||||||| || ||||| |||| |||| ||||||| || ||||||| ||||||||| |||||||||| ||||||||||||| |
|
|
| T |
10422915 |
gtggatggacattgcagttgatcaatgaaaagaaaataatatttgatatatccgttttattatattagagtttaaaaattaaatcac |
10423001 |
T |
 |
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Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 20471468 - 20471540
Alignment:
| Q |
155 |
aaaaagtggtcgaaaattaagggagtttatactcgtatgaagaagttaattgttaaaaaaccaaatagaattaa |
228 |
Q |
| |
|
||||| |||| || ||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
20471468 |
aaaaaatggttgagaattaagggagttcatagtcgtataaagaagttaattgttaaaaaa-taaatagaattaa |
20471540 |
T |
 |
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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 53494 - 53553
Alignment:
| Q |
136 |
caaagtggaaaatgaaaagaaaaagtggtcgaaaattaagggagtttatactcgtatgaa |
195 |
Q |
| |
|
||||||| ||||||| |||||||| |||||||||||||| | |||| ||||| ||||||| |
|
|
| T |
53494 |
caaagtgaaaaatgataagaaaaaatggtcgaaaattaaagaagttcatacttgtatgaa |
53553 |
T |
 |
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Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 53591 - 53641
Alignment:
| Q |
245 |
ttaaattacaagggaggtgcttgtcaatttgataacaaaataagggagatt |
295 |
Q |
| |
|
|||||||| || |||| ||||||||| ||||||||| |||||||||||||| |
|
|
| T |
53591 |
ttaaattataaaggagttgcttgtcactttgataactaaataagggagatt |
53641 |
T |
 |
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