View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19856_high_13 (Length: 360)

Name: NF19856_high_13
Description: NF19856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19856_high_13
NF19856_high_13
[»] chr6 (2 HSPs)
chr6 (1-347)||(20592188-20592535)
chr6 (2-89)||(19314340-19314427)
[»] chr5 (1 HSPs)
chr5 (1-347)||(22160603-22160950)
[»] chr4 (4 HSPs)
chr4 (4-347)||(34611392-34611736)
chr4 (1-175)||(30666303-30666478)
chr4 (197-347)||(30666157-30666307)
chr4 (35-82)||(35268371-35268418)
[»] chr2 (3 HSPs)
chr2 (1-347)||(817207-817535)
chr2 (19-270)||(31323728-31323987)
chr2 (208-312)||(17726655-17726759)
[»] chr1 (4 HSPs)
chr1 (53-347)||(24181385-24181678)
chr1 (1-272)||(47056413-47056685)
chr1 (3-191)||(47065571-47065760)
chr1 (208-300)||(47065477-47065569)
[»] chr3 (2 HSPs)
chr3 (193-291)||(9187883-9187981)
chr3 (26-85)||(9188090-9188149)
[»] chr8 (2 HSPs)
chr8 (4-154)||(16064-16209)
chr8 (103-157)||(16330-16384)


Alignment Details
Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 20592188 - 20592535
Alignment:
Q  1 tgatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgc 99  Q
    ||||||||||||||||| |||||||||| |||| |||| |||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||||||    
T  20592188 tgatttctcctgaaagaaccttatctctcacaaagtgatagtcgatctctatgtgcttggttctttcatggaaaactggattggaagctatatgtagtgc 20592287  T
Q  100 atcttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttgctgctgcc 199  Q
      |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| ||||||||||| |||||||    
T  20592288 tgcttgattgtcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgccttagccacgtgaattcacaagttgatgctgcc 20592387  T
Q  200 ataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctg 299  Q
    ||| |||||||||||||||||||||||||||||||||| ||||| |||||||| || | ||||||||||||||||| ||||||||||||||| |||||||    
T  20592388 atagcacgatattcggcttctgcactagaccttgcaactatgttctgtttcttgctcctccatgagatcaaattccatccaatgaggacacaataccctg 20592487  T
Q  300 aggtggaccttctatctgttggtgaacctgcccaatcaacatcagaat 347  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||    
T  20592488 aggtggaccttctatctgctggtgaacctgcccaatcagtatcagaat 20592535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 19314427 - 19314340
Alignment:
Q  2 gatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagca 89  Q
    ||||||| ||||||||  || ||||||| ||| ||||||||| |||||||||||||||||||||||| | |||| |||||||||||||    
T  19314427 gatttcttctgaaagaatctaatctcttgcaaagtgacagtcgatctctatgtgcttagttctttcaagaaaaaatgggttggaagca 19314340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 22160603 - 22160950
Alignment:
Q  1 tgatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgc 99  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||||||    
T  22160603 tgatttctcttgaaagaaccttatctcttacaaagtgacagtcgatctctatgtgcttggttctttcatggaaaactggattggaagctatatgtagtgc 22160702  T
Q  100 atcttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttgctgctgcc 199  Q
      || | || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||||||| | |||||    
T  22160703 tgctcgattgtcacatattagcttcattgccttgacatctccaaatttgagttgttggagtaattgccttagccacgtgagttcacaagttgttactgcc 22160802  T
Q  200 ataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctg 299  Q
    ||| ||||||||||||||||| |||||||||||||||| || || |||||||| || | ||||||||||||||||| ||||||||||||||| |||||||    
T  22160803 atagcacgatattcggcttctacactagaccttgcaactatattctgtttcttgctcctccatgagatcaaattccctccaatgaggacacaataccctg 22160902  T
Q  300 aggtggaccttctatctgttggtgaacctgcccaatcaacatcagaat 347  Q
    |||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  22160903 aggtggaccttctatctgctggtgaacctgcctaatcagcatcagaat 22160950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 34611736 - 34611392
Alignment:
Q  4 tttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagca-tatgtagtgcatc 102  Q
    |||||||||||||| | ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||| |||| |||||| |    
T  34611736 tttctcctgaaagaactttatctcttacaaagtgacagtcgatctctatgtgcttagttctttcatgaaaaaccgggttggaggcaatatgcagtgcagc 34611637  T
Q  103 ttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttgctgctgccata 202  Q
    |||||| ||| | ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |    
T  34611636 ttggttgtcagagattagtttcattaccttgacgtctcctaatttgagttgttggagtaattgtcttagccatgtgagttcacaagttgttgctgccaca 34611537  T
Q  203 acacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctgagg 302  Q
     ||| |  ||| ||||||||||||||||||||||| ||||| |||||||| ||  ||||||||||||||||   |||||||||||||||  ||||| | |    
T  34611536 tcacaactttctgcttctgcactagaccttgcaactatgttctgtttcttgctctgccatgagatcaaattttttccaatgaggacacaacacccttaag 34611437  T
Q  303 tggaccttctatctgttggtgaacctgcccaatcaacatcagaat 347  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||    
T  34611436 tggaccttctatctgctggtgaacctgcccaatcagcatcagaat 34611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 30666478 - 30666303
Alignment:
Q  1 tgatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgc 99  Q
    |||||||| |||||||  ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  30666478 tgatttcttctgaaagtaccttatctcttacaaagtgacagtcgatctctatgtgcttagttctttcatggaaaactgggttggaagcgatatgtagtgt 30666379  T
Q  100 atcttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccat 175  Q
    | ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30666378 agcttggttgtcacatattagattcattgccttgacatctcctaatttgagatgttggagtaattgtcttagccat 30666303  T

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Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 197 - 347
Target Start/End: Complemental strand, 30666307 - 30666157
Alignment:
Q  197 gccataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtacc 296  Q
    |||||| |||||||||| ||||| |||||||||||||||||  ||||||||||||| || ||||||||||||||||| | ||||||||||||||| ||||    
T  30666307 gccatagcacgatattcagcttcagcactagaccttgcaactttgttttgtttcttgctccgccatgagatcaaattacctccaatgaggacacaatacc 30666208  T
Q  297 ctgaggtggaccttctatctgttggtgaacctgcccaatcaacatcagaat 347  Q
     ||||| |||| | ||||||| ||||||||||||||||||| |||||||||    
T  30666207 ttgaggcggacttactatctgctggtgaacctgcccaatcagcatcagaat 30666157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 35268371 - 35268418
Alignment:
Q  35 gtgacagtcaatctctatgtgcttagttctttcatggaaaactgggtt 82  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  35268371 gtgacagtcaatctctaagtgctttgttctttcatgaaaaactgggtt 35268418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 6e-96; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 817207 - 817535
Alignment:
Q  1 tgatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgc 99  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||| | ||| |||| |||||||||||    
T  817207 tgatttctcctgaaagaaccttatctcttacaaagtggcagtcgatctctatgtgcttggttctttcatggaaaactagattgaaagctatatgtagtgc 817306  T
Q  100 atcttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttgctgctgcc 199  Q
      |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| |||||||||||||||||||    
T  817307 tgcttgattgtcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgccttagccacgtgaattcacaagttgctgctgcc 817406  T
Q  200 ataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctg 299  Q
    ||| |||||||||||||||||||||||||||||||||| ||||| |||||||| ||                   | ||||||||||||||| |||| ||    
T  817407 atagcacgatattcggcttctgcactagaccttgcaactatgttctgtttcttgct-------------------cctccaatgaggacacaataccatg 817487  T
Q  300 aggtggaccttctatctgttggtgaacctgcccaatcaacatcagaat 347  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  817488 aggtggaccttctatctgctggtgaacctgcccaatcagcatcagaat 817535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 31323987 - 31323728
Alignment:
Q  19 ccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagca-tatgtagtgcatcttggttatcacatat 117  Q
    |||| ||||||| || ||| |||||||| |||| || |||  |||| |||||||  ||||| ||||||||| |||| |||||| |  |||||||| | ||    
T  31323987 ccttgtctcttaaaaagtggcagtcaatgtctacgttcttccttctctcatggagtactggattggaagcaatatgaagtgcagccaggttatcagaaat 31323888  T
Q  118 tagcttcattgccttgacatctcctaatttgagttg-------ttggagtaattgtcttatccatgtgagttcacaagttgctgctgccataacacgata 210  Q
    ||| ||||||||||||| ||||| ||| || |||||        | |||||||||||||| |||||| |||||||||| || |||| ||||| || ||||    
T  31323887 tagtttcattgccttgatatctcttaactttagttgcaagagcctagagtaattgtcttagccatgtaagttcacaagatgttgctaccatagcaagata 31323788  T
Q  211 ttcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaa 270  Q
     || | ||||||||| ||  ||| ||| |||| ||| ||||| || ||| |||| |||||    
T  31323787 ctctgattctgcactcgaagttgaaactatgtattgcttcttgctccgcgatgatatcaa 31323728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 312
Target Start/End: Complemental strand, 17726759 - 17726655
Alignment:
Q  208 atattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctgaggtggac 307  Q
    |||||| || |||||||| || || ||||| |  ||||| |||||||||  |||||| |||||||| | ||||||||| ||||| || || || ||||||    
T  17726759 atattctgcctctgcacttgatctagcaacgacattttgcttcttacttttccatgaaatcaaattgcctccaatgagaacacaatatccagatgtggac 17726660  T
Q  308 cttct 312  Q
    |||||    
T  17726659 cttct 17726655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 5e-78; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 53 - 347
Target Start/End: Original strand, 24181385 - 24181678
Alignment:
Q  53 gtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgcatcttggttatcacatattagcttcattgccttgacatctcctaatttgagt 151  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||   |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  24181385 gtgcttagttctttcatggaaaattgggttggaagcgatatgtagtgctatttggttgtcacatattagtttcattgccttgacatctcctaatttgagt 24181484  T
Q  152 tgttggagtaattgtcttatccatgtgagttcacaagttgctgctgccataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttct 251  Q
    ||||||||||| ||||||| |||||||||||||||| |||||  ||||||| ||| ||||| | |||||||| ||| ||||||||| ||||| |||||||    
T  24181485 tgttggagtaa-tgtcttagccatgtgagttcacaatttgctattgccatagcacaatatttgacttctgca-taggccttgcaactatgttctgtttct 24181582  T
Q  252 tacttcgccatgagatcaaattccgtccaatgaggacacagtaccctgaggtggaccttctatctgttggtgaacctgcccaatcaacatcagaat 347  Q
    | || ||||||||||||||||| |  ||||||||||||||   |||||||||||| ||||||| ||   ||||||||||||||||| |||||||||    
T  24181583 tgctccgccatgagatcaaatttcccccaatgaggacacaacgccctgaggtggatcttctatttgcaagtgaacctgcccaatcagcatcagaat 24181678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 47056685 - 47056413
Alignment:
Q  1 tgatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagcata-tgtagtgc 99  Q
    ||||||||||||||| | | ||||| ||||||| ||  ||||| ||||||||    ||||||||| |||| || ||| ||||||| ||| | |||||||     
T  47056685 tgatttctcctgaaaaaacattatcccttacaaagtctcagtccatctctatccatttagttcttgcatgaaagactaggttggatgcaaaatgtagtgt 47056586  T
Q  100 atcttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttgctgctgcc 199  Q
    | ||| ||| ||||||||||| |||| | ||||||| ||||||||||| || ||| |||||| ||||||||  || |||||||||||||||| |||||||    
T  47056585 agcttcgttgtcacatattagtttcaataccttgacgtctcctaattttagctgtaggagtatttgtcttaatcacgtgagttcacaagttgatgctgcc 47056486  T
Q  200 ataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaat 272  Q
    |||| ||||||||| |||||||||||||||||| |||| ||||| | ||||||||| ||  | ||||||||||    
T  47056485 ataatacgatattctgcttctgcactagacctttcaactatgttctatttcttactccgtaacgagatcaaat 47056413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 47065760 - 47065571
Alignment:
Q  3 atttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagcatatgtagtgcat- 101  Q
    ||||||| |||||||||| |||||| ||||| |||||| |||| |||||||||||||| ||||||||| || ||| |||||||  || |||||  ||||     
T  47065760 atttctcttgaaagagccatatctcgtacaaagtgacattcaagctctatgtgcttagctctttcatgaaagactaggttggataca-atgtatagcata 47065662  T
Q  102 -cttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttg 191  Q
      ||| || |||||||| || ||||||||||  || |||||||||| ||| ||||||||||||||||||| | |  |||||||||||||||    
T  47065661 gtttgattgtcacatataagtttcattgcctaaacgtctcctaattcgagctgttggagtaattgtcttaactacatgagttcacaagttg 47065571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 47065569 - 47065477
Alignment:
Q  208 atattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctga 300  Q
    |||||| ||||||||||||||||||| ||| |  || | ||||||||| ||| |||||||| |||| | |||||| | |||||| ||||||||    
T  47065569 atattctgcttctgcactagaccttgtaactacattctatttcttactccgcaatgagatctaatttcctccaataacgacacaataccctga 47065477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 9187981 - 9187883
Alignment:
Q  193 tgctgccataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacaca 291  Q
    |||||||||| |||||||||| ||||||||||||||   ||||||  ||||||||||||| |||| ||||||||||| ||| | |||||| || |||||    
T  9187981 tgctgccatagcacgatattcagcttctgcactagatagtgcaaccctgttttgtttcttgcttctccatgagatcatatttcctccaataagaacaca 9187883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 9188149 - 9188090
Alignment:
Q  26 tcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttgga 85  Q
    |||||||  |||||| || |||||||||||||| |||| ||||||||||||||| |||||    
T  9188149 tcttacatagtgacaatctatctctatgtgcttggttcgttcatggaaaactggattgga 9188090  T

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Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 16064 - 16209
Alignment:
Q  4 tttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgcatc 102  Q
    |||||||||||||| | |||||||| |||| ||  |||   |||| |||| || |||||||||||||  ||||||||||| |||| ||||||||     |    
T  16064 tttctcctgaaagaactttatctctcacaaagtagcagatgatctatatgagc-tagttctttcatgagaaactgggttgaaagcaatatgtag-----c 16157  T
Q  103 ttggttatcacatattagcttcattgccttgacatctcctaatttgagttgt 154  Q
    |||||||| | | |||||||| |||||||||| |||||||||||||||||||    
T  16158 ttggttataaaaaattagcttaattgccttgagatctcctaatttgagttgt 16209  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 16384 - 16330
Alignment:
Q  103 ttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttgg 157  Q
    |||||| ||||| ||||| |||||  ||||| |||||||||||||||||||||||    
T  16384 ttggttgtcacaaattagtttcatcaccttggcatctcctaatttgagttgttgg 16330  T

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