View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19856_high_2 (Length: 683)

Name: NF19856_high_2
Description: NF19856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19856_high_2
NF19856_high_2
[»] chr7 (27 HSPs)
chr7 (9-669)||(24607821-24608487)
chr7 (565-604)||(32566060-32566099)
chr7 (543-609)||(35142146-35142212)
chr7 (543-604)||(21105606-21105667)
chr7 (543-604)||(41029275-41029336)
chr7 (539-604)||(46987089-46987154)
chr7 (565-601)||(3196661-3196697)
chr7 (564-608)||(48693531-48693575)
chr7 (545-604)||(14650513-14650572)
chr7 (565-604)||(30296336-30296375)
chr7 (541-604)||(32513164-32513227)
chr7 (567-609)||(16355511-16355553)
chr7 (539-613)||(18714442-18714516)
chr7 (539-601)||(22555632-22555694)
chr7 (547-613)||(39926539-39926605)
chr7 (548-609)||(6567399-6567460)
chr7 (539-600)||(22548221-22548282)
chr7 (539-608)||(24880451-24880520)
chr7 (539-604)||(30940777-30940842)
chr7 (568-609)||(32263005-32263046)
chr7 (539-604)||(45284818-45284883)
chr7 (565-609)||(8683068-8683112)
chr7 (539-579)||(29339417-29339457)
chr7 (568-604)||(37240100-37240136)
chr7 (548-604)||(38911302-38911358)
chr7 (565-613)||(42435417-42435465)
chr7 (564-604)||(45411638-45411678)
[»] chr6 (18 HSPs)
chr6 (539-604)||(20568284-20568349)
chr6 (539-604)||(17829301-17829366)
chr6 (243-296)||(13842191-13842244)
chr6 (539-604)||(28046171-28046236)
chr6 (565-609)||(29283813-29283857)
chr6 (539-602)||(28758283-28758346)
chr6 (546-609)||(31971527-31971590)
chr6 (540-602)||(19554158-19554220)
chr6 (539-604)||(3294770-3294835)
chr6 (539-604)||(34268288-34268353)
chr6 (545-609)||(404161-404225)
chr6 (544-604)||(655747-655807)
chr6 (565-609)||(1514180-1514224)
chr6 (581-613)||(5040868-5040900)
chr6 (565-617)||(7083011-7083063)
chr6 (565-609)||(8810638-8810682)
chr6 (565-609)||(17382082-17382126)
chr6 (562-606)||(30255076-30255120)
[»] chr1 (33 HSPs)
chr1 (539-607)||(33843194-33843262)
chr1 (539-607)||(33950717-33950785)
chr1 (549-606)||(1408436-1408493)
chr1 (543-608)||(18056713-18056778)
chr1 (543-616)||(18166593-18166666)
chr1 (539-604)||(47528440-47528505)
chr1 (539-604)||(23592130-23592197)
chr1 (565-609)||(28661493-28661537)
chr1 (565-609)||(34632167-34632211)
chr1 (545-604)||(19262906-19262965)
chr1 (549-604)||(34808566-34808621)
chr1 (539-614)||(35473945-35474020)
chr1 (539-604)||(4865821-4865886)
chr1 (539-604)||(9866183-9866248)
chr1 (539-604)||(10664794-10664858)
chr1 (539-600)||(13615605-13615666)
chr1 (539-604)||(16997258-16997323)
chr1 (539-604)||(31762143-31762208)
chr1 (539-604)||(36666575-36666640)
chr1 (539-604)||(38448859-38448924)
chr1 (539-604)||(42490409-42490474)
chr1 (545-609)||(10851825-10851889)
chr1 (543-615)||(12364102-12364174)
chr1 (544-604)||(14520947-14521007)
chr1 (565-613)||(15595722-15595770)
chr1 (565-609)||(24506932-24506976)
chr1 (565-609)||(34733398-34733442)
chr1 (540-608)||(43667957-43668025)
chr1 (552-604)||(44507936-44507988)
chr1 (564-604)||(44579888-44579928)
chr1 (564-608)||(50533070-50533114)
chr1 (565-605)||(50638935-50638975)
chr1 (565-609)||(52441530-52441574)
[»] chr5 (18 HSPs)
chr5 (539-604)||(3198333-3198398)
chr5 (539-602)||(28822755-28822818)
chr5 (549-604)||(31308646-31308701)
chr5 (565-606)||(17145367-17145408)
chr5 (545-608)||(3712072-3712134)
chr5 (565-615)||(36321513-36321563)
chr5 (539-604)||(9688671-9688736)
chr5 (565-614)||(11310470-11310519)
chr5 (567-604)||(17861456-17861493)
chr5 (547-604)||(18391603-18391660)
chr5 (539-604)||(23155899-23155964)
chr5 (539-604)||(27679501-27679566)
chr5 (539-604)||(35109403-35109468)
chr5 (552-609)||(37614433-37614490)
chr5 (565-609)||(16133084-16133128)
chr5 (565-609)||(19248477-19248521)
chr5 (549-601)||(41083546-41083598)
chr5 (565-609)||(42505870-42505914)
[»] chr3 (39 HSPs)
chr3 (539-604)||(13042793-13042858)
chr3 (539-604)||(13050870-13050935)
chr3 (539-604)||(23653215-23653280)
chr3 (543-608)||(35492792-35492857)
chr3 (544-613)||(52119370-52119439)
chr3 (539-609)||(45647304-45647374)
chr3 (552-609)||(10926467-10926524)
chr3 (539-604)||(30200829-30200894)
chr3 (539-602)||(9274683-9274746)
chr3 (539-602)||(29098700-29098763)
chr3 (539-602)||(49983707-49983770)
chr3 (543-609)||(21549036-21549102)
chr3 (546-604)||(24428473-24428531)
chr3 (539-601)||(38949683-38949745)
chr3 (539-601)||(45871026-45871088)
chr3 (539-601)||(54230092-54230154)
chr3 (565-606)||(2662093-2662134)
chr3 (547-604)||(5702179-5702235)
chr3 (549-614)||(7868715-7868779)
chr3 (559-608)||(19599151-19599200)
chr3 (539-604)||(23147971-23148036)
chr3 (539-604)||(25833829-25833893)
chr3 (539-604)||(32776217-32776282)
chr3 (565-614)||(33771683-33771732)
chr3 (539-608)||(41936406-41936475)
chr3 (539-604)||(46880003-46880068)
chr3 (545-602)||(47098524-47098581)
chr3 (552-613)||(47377355-47377416)
chr3 (539-604)||(52670152-52670217)
chr3 (565-609)||(1149088-1149132)
chr3 (544-604)||(3748606-3748666)
chr3 (565-609)||(8174268-8174312)
chr3 (565-609)||(16980373-16980417)
chr3 (565-609)||(21967554-21967598)
chr3 (565-609)||(21989990-21990034)
chr3 (564-604)||(24430152-24430192)
chr3 (539-603)||(32401498-32401561)
chr3 (565-609)||(35863832-35863876)
chr3 (565-609)||(51250252-51250296)
[»] chr2 (25 HSPs)
chr2 (547-604)||(37320518-37320575)
chr2 (549-604)||(36547238-36547293)
chr2 (546-604)||(23405202-23405260)
chr2 (539-604)||(24593379-24593444)
chr2 (565-609)||(12303577-12303621)
chr2 (565-612)||(22608522-22608569)
chr2 (557-604)||(35429619-35429666)
chr2 (549-604)||(40099387-40099441)
chr2 (567-609)||(11043811-11043853)
chr2 (539-609)||(31048309-31048379)
chr2 (543-609)||(40896506-40896572)
chr2 (566-608)||(41492831-41492873)
chr2 (539-609)||(44857233-44857303)
chr2 (539-604)||(3596256-3596321)
chr2 (539-604)||(4183182-4183247)
chr2 (544-609)||(7206123-7206188)
chr2 (539-604)||(7379599-7379664)
chr2 (539-604)||(15939295-15939360)
chr2 (560-609)||(17560254-17560303)
chr2 (539-604)||(20120714-20120779)
chr2 (539-604)||(24393248-24393313)
chr2 (539-604)||(34903520-34903585)
chr2 (565-609)||(7350544-7350588)
chr2 (565-609)||(17142828-17142872)
chr2 (549-609)||(35451246-35451306)
[»] chr8 (26 HSPs)
chr8 (544-604)||(30417608-30417668)
chr8 (539-606)||(444125-444191)
chr8 (539-609)||(27750897-27750967)
chr8 (548-609)||(10152454-10152515)
chr8 (539-604)||(30623296-30623361)
chr8 (549-608)||(7679901-7679960)
chr8 (543-614)||(8137928-8137999)
chr8 (545-604)||(9655996-9656055)
chr8 (549-604)||(39756972-39757027)
chr8 (565-604)||(41188859-41188898)
chr8 (539-609)||(1342724-1342794)
chr8 (550-604)||(13477903-13477957)
chr8 (539-609)||(26192715-26192785)
chr8 (539-604)||(481017-481082)
chr8 (539-604)||(5332922-5332987)
chr8 (539-604)||(10083169-10083234)
chr8 (539-608)||(10587276-10587345)
chr8 (539-604)||(12700990-12701055)
chr8 (539-608)||(34894371-34894440)
chr8 (547-604)||(37524214-37524271)
chr8 (539-607)||(5328566-5328634)
chr8 (548-600)||(9070965-9071017)
chr8 (565-609)||(13286129-13286173)
chr8 (565-613)||(16081300-16081348)
chr8 (565-609)||(17704011-17704055)
chr8 (565-609)||(37015855-37015899)
[»] chr4 (33 HSPs)
chr4 (539-604)||(2539296-2539361)
chr4 (543-604)||(19908695-19908756)
chr4 (539-604)||(45139880-45139945)
chr4 (543-604)||(48171884-48171945)
chr4 (543-615)||(32180822-32180894)
chr4 (546-602)||(39669496-39669552)
chr4 (544-604)||(42316822-42316882)
chr4 (547-598)||(22530159-22530210)
chr4 (565-604)||(31760249-31760288)
chr4 (539-602)||(46409474-46409537)
chr4 (539-614)||(48955285-48955360)
chr4 (539-605)||(2629584-2629650)
chr4 (543-613)||(6520065-6520135)
chr4 (543-617)||(41520944-41521018)
chr4 (544-602)||(56551590-56551648)
chr4 (568-609)||(11314711-11314752)
chr4 (539-604)||(31852355-31852420)
chr4 (539-604)||(34353785-34353850)
chr4 (543-604)||(36478994-36479055)
chr4 (547-604)||(38147550-38147606)
chr4 (539-604)||(42044045-42044110)
chr4 (539-604)||(48317717-48317782)
chr4 (565-609)||(7230278-7230322)
chr4 (565-604)||(10529300-10529340)
chr4 (565-609)||(21317357-21317401)
chr4 (545-593)||(33122347-33122395)
chr4 (564-604)||(33933763-33933803)
chr4 (565-609)||(43782324-43782368)
chr4 (559-607)||(44909824-44909872)
chr4 (544-604)||(46206583-46206643)
chr4 (567-615)||(47266144-47266192)
chr4 (545-609)||(49473643-49473707)
chr4 (540-604)||(55853108-55853172)
[»] scaffold0093 (1 HSPs)
scaffold0093 (581-613)||(23906-23938)
[»] scaffold0117 (1 HSPs)
scaffold0117 (565-604)||(18296-18335)
[»] scaffold0083 (1 HSPs)
scaffold0083 (539-602)||(45948-46011)
[»] scaffold1709 (1 HSPs)
scaffold1709 (539-604)||(177-242)
[»] scaffold1331 (1 HSPs)
scaffold1331 (539-604)||(79-144)
[»] scaffold0250 (1 HSPs)
scaffold0250 (539-604)||(15011-15076)
[»] scaffold1372 (1 HSPs)
scaffold1372 (539-603)||(1871-1935)
[»] scaffold0896 (1 HSPs)
scaffold0896 (565-609)||(3139-3183)
[»] scaffold0040 (1 HSPs)
scaffold0040 (565-609)||(56782-56826)


Alignment Details
Target: chr7 (Bit Score: 527; Significance: 0; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 527; E-Value: 0
Query Start/End: Original strand, 9 - 669
Target Start/End: Complemental strand, 24608487 - 24607821
Alignment:
Q  9 attatactaaattaaaattcaagaaaaataaatcatgtctcctttaagggattatcagattgttaagggaaaattggatgatcatacaatgctgttgtaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24608487 attatactaaattaaaattcaagaaaaataaatcctgtctcctttaagggattatcagattgttaagggaaaattggatgatcatacaatgctgttgtaa 24608388  T
Q  109 gtcttactcaagcaatatgaggtcttaacttatttcttcatataatatgaggtctgctttgttttcttcgaagagaacttacaacttattaacggaacaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24608387 gtcttactcaagcaatatgaggtcttaacttatttcttcatataatatgaggtctgctttgttttcttcgaagagaacttacaacttattaactgaacaa 24608288  T
Q  209 ctcttggtttggtttggactcgggatgccgaacatcgaatctgcaacaactaattcttacatggtcaatgttgaggtgtgatgatggcaacaaaacaact 308  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24608287 ctcttggtttggtttggactcgggatgccgagcatcgaatctgcaacaactaattcttacatggtcaatgttgaggtgtgatgatggcaacagaacaact 24608188  T
Q  309 ctt-ggtgattaaaatgtaacaaacgattctagaggtcaaatgcttttactcggttttacttagaaaagtgaaacctaagccatagaaattaaatagtta 407  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  24608187 cttaggtgattaaaatgtaacaaacgattctagaggtctaatgcttttactcggttttactttgaaaagggaaacctaagtcatagaaattaaatagtta 24608088  T
Q  408 gaatagtgaaacctaaattagtcgaagagaatttagaaataatatactttaatagagtaaaactaattatgttttacttatattttagagcaccaaattt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  24608087 gaatagtgaaacctaaattagtcgaagagaatttagaaataatatactttaatagag-aaaactaattaggttttacttatattttagagcaccaaattt 24607989  T
Q  508 gttattgttgttgct------tatatannnnnnnnnngtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaa 601  Q
     ||||||||||||||      ||||||           |||||||||||| ||||||||||||||||||||||||||||| |||||| ||| |||||||     
T  24607988 attattgttgttgcttatatatatatattttttttggatgttcggggttcaaacctcgaactctgcatatattatacaatatctttatcaattgagctag 24607889  T
Q  602 gcttacgatgacggttgcttatattctaaactagtgggagattacctaaatttcacatatgtgtttgt 669  Q
    | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24607888 gtttacgatgactgttgcttatattctaaactagtgggagattacctaaatttcacatatgtgtttgt 24607821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 565 - 604
Target Start/End: Original strand, 32566060 - 32566099
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  32566060 tgcatatattatacactgtctttaccaactgagctaagct 32566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 543 - 609
Target Start/End: Original strand, 35142146 - 35142212
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||||||| |||| |||||||||||| || ||||  || ||||||||||||||| ||||    
T  35142146 tcggggttcgaacctcaaactttgcatatattatgcattgtccatatcaactgagctaagctcacga 35142212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 604
Target Start/End: Complemental strand, 21105667 - 21105606
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||||||||  |||||||||||| || | ||  ||||||||||||||||||    
T  21105667 tcggggttcgaacctcgaaccttgcatatattatgcattttccataccaactgagctaagct 21105606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 604
Target Start/End: Complemental strand, 41029336 - 41029275
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||| |||||||| || ||  ||||||||||||||| |||| |||||||||||||||||||    
T  41029336 tcgggattcgaaccccggaccttgcatatattatacattgtccttaccaactgagctaagct 41029275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 46987154 - 46987089
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| || ||  |||||||||||| || |||| |||||||||||||||||||    
T  46987154 gtgtccggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagct 46987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 601
Target Start/End: Original strand, 3196661 - 3196697
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaa 601  Q
    ||||||||||||||| |||||||||||||||||||||    
T  3196661 tgcatatattatacattgtctttaccaactgagctaa 3196697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 608
Target Start/End: Complemental strand, 48693575 - 48693531
Alignment:
Q  564 ctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||    
T  48693575 ctgcatatattatacactgtctctaccaactgaactaagcttacg 48693531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 604
Target Start/End: Complemental strand, 14650572 - 14650513
Alignment:
Q  545 ggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||  ||| | ||||||| ||||| ||||||||||||||| |||||||||||    
T  14650572 ggggttcgaactccgatccctgcataaattatgcaatgtctttaccaattgagctaagct 14650513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 604
Target Start/End: Complemental strand, 30296375 - 30296336
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  30296375 tgcatatattatacattgtccttaccaactgagctaagct 30296336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 604
Target Start/End: Original strand, 32513164 - 32513227
Alignment:
Q  541 gttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||| ||||||||||||||||  ||||||||||||||| |||  |||||| ||||| ||||||    
T  32513164 gttcgaggttcgaacctcgaaccttgcatatattatacattgtacttaccagctgagttaagct 32513227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 609
Target Start/End: Complemental strand, 16355553 - 16355511
Alignment:
Q  567 catatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||    
T  16355553 catatattatacaatgtctctaccaactgagttaagctcacga 16355511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 613
Target Start/End: Complemental strand, 18714516 - 18714442
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgac 613  Q
    |||| ||||||| ||||| || ||  |||||||||||| || |||| ||||||||||||||||||| || |||||    
T  18714516 gtgtacggggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctgacaatgac 18714442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 601
Target Start/End: Complemental strand, 22555694 - 22555632
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaa 601  Q
    ||||||||||||||||| | | ||  ||||||| |||| ||||||| ||||||||||||||||    
T  22555694 gtgttcggggttcgaactttggaccgtgcatattttatgcaatgtccttaccaactgagctaa 22555632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 547 - 613
Target Start/End: Original strand, 39926539 - 39926605
Alignment:
Q  547 ggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgac 613  Q
    |||| ||||| |||||  |||||||||||| || |||| ||| ||||||||||||||| ||||||||    
T  39926539 ggtttgaaccccgaacattgcatatattatgcattgtccttatcaactgagctaagctcacgatgac 39926605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 609
Target Start/End: Original strand, 6567399 - 6567460
Alignment:
Q  548 gttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||| |||  ||||||||||||||  ||| || |||||||||||| |||||||||||    
T  6567399 gttcgaaccccgacttctgcatatattatgtaatatccttaccaactgagttaagcttacga 6567460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 600
Target Start/End: Complemental strand, 22548282 - 22548221
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagcta 600  Q
    ||||||||||||||||||  || | ||| ||| ||||| ||||||| |||||||||||||||    
T  22548282 gtgttcggggttcgaaccctgacccctgtataaattatgcaatgtccttaccaactgagcta 22548221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 608
Target Start/End: Original strand, 24880451 - 24880520
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    |||||||||||||||||| ||    ||||||||| ||| |||| ||  ||||||||||||||||||||||    
T  24880451 gtgttcggggttcgaaccccggctcctgcatataatattcaatatccctaccaactgagctaagcttacg 24880520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 30940842 - 30940777
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||| |||||||| ||  ||||||||||| ||| |||| ||  ||||||||||||||||||    
T  30940842 gtgttcgggattcgaaccccggcctctgcatataatatgcaatatcactaccaactgagctaagct 30940777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 609
Target Start/End: Complemental strand, 32263046 - 32263005
Alignment:
Q  568 atatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| ||||| |||||||||||||||||| ||||    
T  32263046 atatattatacattgtctataccaactgagctaagctcacga 32263005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 45284818 - 45284883
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| ||| | ||||||| ||||| |||||||  || |||||||||||||||    
T  45284818 gtgtccggggttcgaaccccgacccctgcataaattattcaatgtccctatcaactgagctaagct 45284883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 8683112 - 8683068
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || ||||| |||||||||||||||||| ||||    
T  8683112 tgcatatattatgcattgtctataccaactgagctaagctcacga 8683068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 539 - 579
Target Start/End: Original strand, 29339417 - 29339457
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattataca 579  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  29339417 gtgtttggggttcgaacctcgacccctgcatatattataca 29339457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 568 - 604
Target Start/End: Original strand, 37240100 - 37240136
Alignment:
Q  568 atatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  37240100 atatattatgcaatgtctttaccaactgagttaagct 37240136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 548 - 604
Target Start/End: Complemental strand, 38911358 - 38911302
Alignment:
Q  548 gttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||| || |||  ||||||||||||||| |||||||| |||||||| ||||||    
T  38911358 gttcgaacttcaaaccttgcatatattatacattgtctttatcaactgagttaagct 38911302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 613
Target Start/End: Original strand, 42435417 - 42435465
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacgatgac 613  Q
    |||||||||||| ||  |||| |||||||||||||||||| ||||||||    
T  42435417 tgcatatattatgcatagtctctaccaactgagctaagctcacgatgac 42435465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 564 - 604
Target Start/End: Complemental strand, 45411678 - 45411638
Alignment:
Q  564 ctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||| ||||||||||||  |||||||||||||||||||    
T  45411678 ctgcataaattatacaatgttcttaccaactgagctaagct 45411638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 7e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 20568284 - 20568349
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||||||| ||| | ||||||||||||| ||||||| |||||||||||||||||||    
T  20568284 gtgttcggggttcgaaccccgacccctgcatatattatgcaatgtccttaccaactgagctaagct 20568349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 17829301 - 17829366
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||||||||| ||| |||||||||||| ||  ||| |||||||||||||||||||    
T  17829301 gtgttcggggttcgaacctcggactttgcatatattatgcatagtccttaccaactgagctaagct 17829366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 13842244 - 13842191
Alignment:
Q  243 tcgaatctgcaacaactaattcttacatggtcaatgttgaggtgtgatgatggc 296  Q
    ||||| || |||||||||||||||||||| ||| ||||||||| ||||||||||    
T  13842244 tcgaacctacaacaactaattcttacatgatcagtgttgaggtttgatgatggc 13842191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 28046171 - 28046236
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||| |||||| |||  |||||||||||| || |||||||| ||||||| |||||||    
T  28046171 gtgttcggggttcaaacctcaaaccttgcatatattatgcattgtctttatcaactgaactaagct 28046236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 29283857 - 29283813
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||    
T  29283857 tgcatatattatacattgtctctaccaactgagttaagcttacga 29283813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 602
Target Start/End: Original strand, 28758283 - 28758346
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    |||||||||||| |||||||| ||| |||||||||||| || |||  |||||| ||||||||||    
T  28758283 gtgttcggggtttgaacctcggactttgcatatattatgcattgttcttaccagctgagctaag 28758346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 609
Target Start/End: Complemental strand, 31971590 - 31971527
Alignment:
Q  546 gggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||| |||||||| ||  |||||||||||| || |||| |||||||||||| |||||||||||    
T  31971590 gggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagttaagcttacga 31971527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 602
Target Start/End: Complemental strand, 19554220 - 19554158
Alignment:
Q  540 tgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    ||||||||||||||| | | |||  |||||||||||| || |||||||||||||| |||||||    
T  19554220 tgttcggggttcgaatcacaaaccttgcatatattatgcattgtctttaccaactaagctaag 19554158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 3294835 - 3294770
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| ||| | ||||||||| ||| |||| ||  ||||||||||||||||||    
T  3294835 gtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagct 3294770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 34268353 - 34268288
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||||||  || | ||||||| ||||| |||||||  ||||||| ||||||||||    
T  34268353 gtgttcggggttcgaaccctgacccctgcataaattatgcaatgtccctaccaacggagctaagct 34268288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 545 - 609
Target Start/End: Complemental strand, 404225 - 404161
Alignment:
Q  545 ggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| ||  |||||||||||| || |||| ||||||||| || |||||| ||||    
T  404225 ggggttcgaacctcggacattgcatatattatgcattgtccttaccaactaagttaagctcacga 404161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 544 - 604
Target Start/End: Original strand, 655747 - 655807
Alignment:
Q  544 cggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||| || ||  |||||||||||| || ||||  ||||||||||||||||||    
T  655747 cggggttcgaaccccggaccttgcatatattatgcattgtcgataccaactgagctaagct 655807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 1514180 - 1514224
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| |||| | ||||||||||||||||| ||||    
T  1514180 tgcatatattatacattgtcctaaccaactgagctaagctcacga 1514224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 581 - 613
Target Start/End: Original strand, 5040868 - 5040900
Alignment:
Q  581 tgtctttaccaactgagctaagcttacgatgac 613  Q
    |||||||||||||||||||||||| ||||||||    
T  5040868 tgtctttaccaactgagctaagctcacgatgac 5040900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 617
Target Start/End: Original strand, 7083011 - 7083063
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacgatgacggtt 617  Q
    |||||||||||| || |||| ||||||| ||||||||||| |||| |||||||    
T  7083011 tgcatatattatgcattgtccttaccaattgagctaagctcacgaggacggtt 7083063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 8810682 - 8810638
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||  | |||||||||||||||||||||||| ||||    
T  8810682 tgcatatattatgtattgtctttaccaactgagctaagctcacga 8810638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 17382126 - 17382082
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| ||||  |||||||||||||||||| ||||    
T  17382126 tgcatatattatacattgtccataccaactgagctaagctcacga 17382082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 562 - 606
Target Start/End: Complemental strand, 30255120 - 30255076
Alignment:
Q  562 ctctgcatatattatacaatgtctttaccaactgagctaagctta 606  Q
    |||||||||||||||||||||||  |||||| |||||||| ||||    
T  30255120 ctctgcatatattatacaatgtccctaccaagtgagctaaactta 30255076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 539 - 607
Target Start/End: Original strand, 33843194 - 33843262
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttac 607  Q
    |||||||||||||||||| ||| ||||||||| ||||| |||| ||| || ||||||||||||||||||    
T  33843194 gtgttcggggttcgaaccccgacctctgcataaattatgcaatatctctatcaactgagctaagcttac 33843262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 539 - 607
Target Start/End: Complemental strand, 33950785 - 33950717
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttac 607  Q
    |||||||||||||||||| ||| ||||||||| ||||| |||| ||| || ||||||||||||||||||    
T  33950785 gtgttcggggttcgaaccccgacctctgcataaattatgcaatatctctatcaactgagctaagcttac 33950717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 606
Target Start/End: Complemental strand, 1408493 - 1408436
Alignment:
Q  549 ttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagctta 606  Q
    ||||||| ||||||| |||||||||||| || |||| |||||||||||| ||||||||    
T  1408493 ttcgaacttcgaactttgcatatattatgcattgtccttaccaactgagttaagctta 1408436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 608
Target Start/End: Original strand, 18056713 - 18056778
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    ||||||||||||||||  ||  |||||||||||| || |||| |||||||||||| ||||||||||    
T  18056713 tcggggttcgaacctcacacattgcatatattatgcattgtccttaccaactgagttaagcttacg 18056778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 18166666 - 18166593
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgacggt 616  Q
    |||||||| ||||| || ||| |||||||||||| || ||||| |||||||||||||||||  |||| ||||||    
T  18166666 tcggggtttgaaccccggactttgcatatattatgcattgtctataccaactgagctaagcccacgaggacggt 18166593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 47528440 - 47528505
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| |||||||||||||||| ||  ||| |||||||| || |||| |||||||||||||||||||    
T  47528440 gtgtccggggttcgaacctcggaccttgcgtatattatgcattgtccttaccaactgagctaagct 47528505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 23592197 - 23592130
Alignment:
Q  539 gtgttcggggttcgaacctcgaac--tctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||||||||| ||  | |  |||||||||||| |||||||||||||||| |||||||    
T  23592197 gtgttcggggttcgaacctcggaccttatatatatattatacattgtctttaccaactgaactaagct 23592130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 28661537 - 28661493
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||    
T  28661537 tgcatatattatacaatgtccttaccaactgagttaaacttacga 28661493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 34632211 - 34632167
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||    
T  34632211 tgcatatattatacattgtctataccaactgagctaagctcacga 34632167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 604
Target Start/End: Original strand, 19262906 - 19262965
Alignment:
Q  545 ggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||| |||||| ||||||| |||| || |||| ||| |||||||||||||||    
T  19262906 ggggttcgaaccccgaactttgcatatgttatgcattgtccttatcaactgagctaagct 19262965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 604
Target Start/End: Original strand, 34808566 - 34808621
Alignment:
Q  549 ttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||  |||||||||||| || |||| ||| |||||||||||||||    
T  34808566 ttcgaacctcgaaccttgcatatattatgcattgtccttaacaactgagctaagct 34808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 614
Target Start/End: Complemental strand, 35474020 - 35473945
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgacg 614  Q
    |||| |||||||||||||  ||||  |||||||||||| || | || ||||||| ||||||||||| |||||||||    
T  35474020 gtgtccggggttcgaaccctgaaccttgcatatattatgcattatccttaccaattgagctaagctcacgatgacg 35473945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 4865821 - 4865886
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||||||  ||| | || |||||||||| |||||||  ||||||||||| ||||||    
T  4865821 gtgttcggggttcgaactccgacccctacatatattatgcaatgtccctaccaactgagttaagct 4865886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 9866183 - 9866248
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||| |||||||| ||| | ||||||||| ||| |||| ||  ||||||||||||||||||    
T  9866183 gtgttcgggattcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagct 9866248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 10664794 - 10664858
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| ||| ||||||||||| ||| |||| ||  ||||||||||||||||||    
T  10664794 gtgtccggggttcgaaccccga-ctctgcatataatatgcaatatccctaccaactgagctaagct 10664858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 600
Target Start/End: Original strand, 13615605 - 13615666
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagcta 600  Q
    ||||||||||||||||||| | ||  ||||| |||||| || |||| |||||||||||||||    
T  13615605 gtgttcggggttcgaaccttggaccttgcatgtattatgcattgtccttaccaactgagcta 13615666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 16997258 - 16997323
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||||||  | ||||||| | ||| || ||||| ||||||||||||||||||    
T  16997258 gtgtccggggttcgaacctcggcccctgcataaaatatgcattgtctctaccaactgagctaagct 16997323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 31762143 - 31762208
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||| ||||||||||||| ||||| ||||| ||| |||| |  |||||||||||||||||||    
T  31762143 gtgtccggtgttcgaacctcgacctctgaatataatatgcaatattcttaccaactgagctaagct 31762208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 36666575 - 36666640
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| ||  | ||||||| ||||| |||||||  ||||||||||||||||||    
T  36666575 gtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgagctaagct 36666640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 38448859 - 38448924
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| |||| |||||||| || ||  |||||||||||| || |||| |||||||||||||||||||    
T  38448859 gtgtccgggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagct 38448924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 42490409 - 42490474
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| ||| | ||||||||| ||| |||| ||  ||||||||||||||||||    
T  42490409 gtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagct 42490474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 545 - 609
Target Start/End: Complemental strand, 10851889 - 10851825
Alignment:
Q  545 ggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| ||  | ||||||||| |||||||| || ||||||| ||||||||||| ||||    
T  10851889 ggggttcgaaccccgtcccctgcatataatatacaatatccttaccaattgagctaagctcacga 10851825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 543 - 615
Target Start/End: Original strand, 12364102 - 12364174
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgacgg 615  Q
    |||||||||||||| |  ||| ||||||| |||| ||| |||  |||||||||||||||||| |||| |||||    
T  12364102 tcggggttcgaaccccagactttgcatattttatgcaaggtccataccaactgagctaagctcacgaggacgg 12364174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 544 - 604
Target Start/End: Complemental strand, 14521007 - 14520947
Alignment:
Q  544 cggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||| | |||| ||||||| |||| || ||||  ||||||||||||||||||    
T  14521007 cggggttcgaaccccaaactttgcatattttatgcattgtccataccaactgagctaagct 14520947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 613
Target Start/End: Complemental strand, 15595770 - 15595722
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacgatgac 613  Q
    |||||||||||| |||||||  |||||||||||||||||| ||| ||||    
T  15595770 tgcatatattatgcaatgtccctaccaactgagctaagctcacggtgac 15595722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 24506932 - 24506976
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||| ||||||| ||||| || ||||||||||||||||||||    
T  24506932 tgcatattttatacattgtctatatcaactgagctaagcttacga 24506976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 34733442 - 34733398
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || |||| ||||||||||||||||||| ||||    
T  34733442 tgcatatattatgcattgtccttaccaactgagctaagctcacga 34733398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 540 - 608
Target Start/End: Original strand, 43667957 - 43668025
Alignment:
Q  540 tgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    ||||||||||||||||| ||    ||||||||| ||| |||| ||| ||| ||||||||||||||||||    
T  43667957 tgttcggggttcgaaccccggttcctgcatataatatgcaatatctctacgaactgagctaagcttacg 43668025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 552 - 604
Target Start/End: Original strand, 44507936 - 44507988
Alignment:
Q  552 gaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||| ||  ||||||||||||||| |||| | |||||||||||||||||    
T  44507936 gaacctcggaccttgcatatattatacattgtcctaaccaactgagctaagct 44507988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 564 - 604
Target Start/End: Complemental strand, 44579928 - 44579888
Alignment:
Q  564 ctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||| |||||||||||||| || |||||||||||||||    
T  44579928 ctgcataaattatacaatgtctctatcaactgagctaagct 44579888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 564 - 608
Target Start/End: Complemental strand, 50533114 - 50533070
Alignment:
Q  564 ctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    ||||||||||||| |||||| | |||||||||||||||| |||||    
T  50533114 ctgcatatattatgcaatgtttctaccaactgagctaagtttacg 50533070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 605
Target Start/End: Original strand, 50638935 - 50638975
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagctt 605  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  50638935 tgcatatattatgcattgtccttaccaactgagctaagctt 50638975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 52441530 - 52441574
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || ||||| |||||||||||||||||| ||||    
T  52441530 tgcatatattatgcattgtctataccaactgagctaagctcacga 52441574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 3198398 - 3198333
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||||| | | ||||||||||||| |||||||  ||||||||||||||||||    
T  3198398 gtgtccggggttcgaacctcaacccctgcatatattatgcaatgtccctaccaactgagctaagct 3198333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 539 - 602
Target Start/End: Original strand, 28822755 - 28822818
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    |||||||||||||||| | ||| ||||||||| |||||||||||||  ||||||||||| ||||    
T  28822755 gtgttcggggttcgaatcccgatctctgcataaattatacaatgtccctaccaactgagataag 28822818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 604
Target Start/End: Original strand, 31308646 - 31308701
Alignment:
Q  549 ttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||| |||  ||||||||||||| | ||||||||||||||||||||||||    
T  31308646 ttcgaacctctaaccttgcatatattatatattgtctttaccaactgagctaagct 31308701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 565 - 606
Target Start/End: Original strand, 17145367 - 17145408
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagctta 606  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  17145367 tgcatatattatacattgtctttaccaactgagttaagctta 17145408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 608
Target Start/End: Original strand, 3712072 - 3712134
Alignment:
Q  545 ggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    |||||||||||| ||| |||||||||||  || |||| ||| ||||||||||||||||||||||    
T  3712072 ggggttcgaacc-cgatctctgcatataaaatgcaatatctctaccaactgagctaagcttacg 3712134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 615
Target Start/End: Original strand, 36321513 - 36321563
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacgatgacgg 615  Q
    |||||||||||| || |||| ||||||||||||||||||| |||| |||||    
T  36321513 tgcatatattatgcattgtccttaccaactgagctaagctcacgaggacgg 36321563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 9688671 - 9688736
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||||||| ||| ||||||||||| ||| |||| | | ||| |||| |||||||||    
T  9688671 gtgttcggggttcgaaccccgacctctgcatataatatgcaatatttctacaaactaagctaagct 9688736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 614
Target Start/End: Original strand, 11310470 - 11310519
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacgatgacg 614  Q
    ||||||||||||||| ||||   ||||||||||||||||| |||||||||    
T  11310470 tgcatatattatacattgtccaaaccaactgagctaagctcacgatgacg 11310519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 604
Target Start/End: Original strand, 17861456 - 17861493
Alignment:
Q  567 catatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  17861456 catatattatacattgtctttaccaactaagctaagct 17861493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 18391660 - 18391603
Alignment:
Q  547 ggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||| ||  ||||||| |||| || |||| |||||||||||||||||||    
T  18391660 ggttcgaacctcggaccttgcatattttatgcattgtccttaccaactgagctaagct 18391603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 23155964 - 23155899
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||| ||||||||||||  ||||||||| ||||| |||||||  | |||| |||||||||||    
T  23155964 gtgttcggagttcgaacctcggcctctgcataaattatgcaatgtccctgccaattgagctaagct 23155899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 27679566 - 27679501
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| |||| || ||||| |||||  |||||||||||| || | ||||||||||||||||||||||    
T  27679566 gtgtccgggatttgaaccccgaaccttgcatatattatgcattatctttaccaactgagctaagct 27679501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 35109468 - 35109403
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| |||| ||||||||||| ||  ||||||||||||  | ||||||||||||||||| ||||||    
T  35109468 gtgtccgggattcgaacctcggaccttgcatatattatgtattgtctttaccaactgagttaagct 35109403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 609
Target Start/End: Original strand, 37614433 - 37614490
Alignment:
Q  552 gaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||  |||||||||||| |  ||||| |||||||||||||||||| ||||    
T  37614433 gaacctcgaaccttgcatatattatgcgttgtctctaccaactgagctaagctcacga 37614490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 16133084 - 16133128
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || |||| ||||||||||||||||||| ||||    
T  16133084 tgcatatattatgcattgtccttaccaactgagctaagctcacga 16133128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 19248521 - 19248477
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || ||||| |||||||||||||||||| ||||    
T  19248521 tgcatatattatgcattgtctataccaactgagctaagctcacga 19248477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 549 - 601
Target Start/End: Original strand, 41083546 - 41083598
Alignment:
Q  549 ttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaa 601  Q
    |||||||| ||| | ||||||| ||||| |||||||| |||||||||||||||    
T  41083546 ttcgaaccccgacccctgcataaattatgcaatgtctctaccaactgagctaa 41083598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 42505914 - 42505870
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || ||||  |||||||||||||||||||||||    
T  42505914 tgcatatattatgcattgtccataccaactgagctaagcttacga 42505870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 13042793 - 13042858
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||| |||||||||||| || ||  ||||||||||||| | ||||||||||||||||||||||||    
T  13042793 gtgtttggggttcgaaccccggaccttgcatatattataaattgtctttaccaactgagctaagct 13042858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 13050870 - 13050935
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||| |||||||||||| || ||  ||||||||||||| | ||||||||||||||||||||||||    
T  13050870 gtgtttggggttcgaaccccggaccttgcatatattataaattgtctttaccaactgagctaagct 13050935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 23653215 - 23653280
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||||||| ||| | ||||||||||||| ||||||  |||||||||||| ||||||    
T  23653215 gtgttcggggttcgaaccccgacccctgcatatattatgcaatgttcttaccaactgagttaagct 23653280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 608
Target Start/End: Complemental strand, 35492857 - 35492792
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    ||||| ||||||||||||||| |||||||||||| || |||  ||||||||||||||||| |||||    
T  35492857 tcgggattcgaacctcgaactttgcatatattatgcattgttcttaccaactgagctaagtttacg 35492792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 613
Target Start/End: Complemental strand, 52119439 - 52119370
Alignment:
Q  544 cggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgac 613  Q
    ||||||||||||| |||||  |||||||||||| || |||| ||||||||||||||||||| | ||||||    
T  52119439 cggggttcgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaagctcaagatgac 52119370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 45647374 - 45647304
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||| ||||||||||||| ||  | |||||||| ||||||||||||  |||||||||||||||||| ||||    
T  45647374 gtgtccggggttcgaaccccgccccctgcatattttatacaatgtccctaccaactgagctaagctaacga 45647304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 609
Target Start/End: Complemental strand, 10926524 - 10926467
Alignment:
Q  552 gaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||| |||||  |||||||||||| || |||| ||||||||||||||||||||||||    
T  10926524 gaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaagcttacga 10926467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 30200894 - 30200829
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||||| |||  |||||||||||| || |||| ||| |||||||||||||||    
T  30200894 gtgtccggggttcgaacctcaaaccttgcatatattatgcattgtccttagcaactgagctaagct 30200829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 602
Target Start/End: Original strand, 9274683 - 9274746
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    ||||||| ||||||| |||||    ||||||||||||| ||||||||||| |||||||||||||    
T  9274683 gtgttcgaggttcgatcctcggctcctgcatatattatgcaatgtctttatcaactgagctaag 9274746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 602
Target Start/End: Complemental strand, 29098763 - 29098700
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    |||| ||||||||||||| ||| | ||||||||| |||||||| ||| ||||||||||| ||||    
T  29098763 gtgtccggggttcgaaccccgacccctgcatataatatacaatatctctaccaactgagttaag 29098700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 602
Target Start/End: Original strand, 49983707 - 49983770
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    |||| ||||||||||||| | | | ||||||| |||||||||||||  ||||||||||||||||    
T  49983707 gtgtccggggttcgaaccccaacccctgcataaattatacaatgtccctaccaactgagctaag 49983770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 609
Target Start/End: Complemental strand, 21549102 - 21549036
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||   |||  ||||||||||||||| ||||  || ||||||||||||||||||||    
T  21549102 tcggggttcgaaccctaaaccttgcatatattatacattgtccatatcaactgagctaagcttacga 21549036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 604
Target Start/End: Original strand, 24428473 - 24428531
Alignment:
Q  546 gggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||| |||||||| ||| |||||||||||| || ||||  ||||||||||||||||||    
T  24428473 gggtttgaacctcggactttgcatatattatgcattgtccataccaactgagctaagct 24428531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 601
Target Start/End: Complemental strand, 38949745 - 38949683
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaa 601  Q
    |||||||||||||||||| ||  | ||||||| ||||| |||||||  |||||||||||||||    
T  38949745 gtgttcggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgagctaa 38949683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 601
Target Start/End: Complemental strand, 45871088 - 45871026
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaa 601  Q
    |||| ||||||||||||| ||| | ||||||||| |||||||| ||  |||||||||||||||    
T  45871088 gtgtccggggttcgaaccccgacccctgcatataatatacaatatccctaccaactgagctaa 45871026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 601
Target Start/End: Original strand, 54230092 - 54230154
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaa 601  Q
    |||| ||||||||||||| | |||  |||||||||||| || |||| ||||||||||||||||    
T  54230092 gtgtccggggttcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagctaa 54230154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 606
Target Start/End: Complemental strand, 2662134 - 2662093
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagctta 606  Q
    |||||||||||| || ||||||||||||||||||||| ||||    
T  2662134 tgcatatattatgcattgtctttaccaactgagctaaactta 2662093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 5702179 - 5702235
Alignment:
Q  547 ggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||| |||  |||||||||||| || |||| |||||||||||||||||||    
T  5702179 ggttcgaacctcaaaccttgcatatattatgcattgtc-ttaccaactgagctaagct 5702235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 614
Target Start/End: Complemental strand, 7868779 - 7868715
Alignment:
Q  549 ttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgacg 614  Q
    |||||||| |||||| |||||||||||| || |||  ||||||||||||||||||| |||| ||||    
T  7868779 ttcgaacc-cgaactttgcatatattatgcattgttcttaccaactgagctaagctcacgaggacg 7868715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 608
Target Start/End: Original strand, 19599151 - 19599200
Alignment:
Q  559 gaactctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    ||||| ||||||||||||| | |||| ||||||||||||||||| |||||    
T  19599151 gaactttgcatatattatatattgtccttaccaactgagctaagtttacg 19599200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 23147971 - 23148036
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||||||| || ||   |||||||||||  | |||| |||||||||||||||||||    
T  23147971 gtgttcggggttcgaaccccggacctcgcatatattatgtattgtccttaccaactgagctaagct 23148036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 25833893 - 25833829
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||| |||||||||| ||  | ||||||||| ||| |||| ||||||||||||||||||||||    
T  25833893 gtgttcgaggttcgaaccccgctc-ctgcatataatatgcaatatctttaccaactgagctaagct 25833829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 32776282 - 32776217
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| ||  | ||||||| ||||| |||||||  ||||||||||||||||||    
T  32776282 gtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgagctaagct 32776217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 614
Target Start/End: Complemental strand, 33771732 - 33771683
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacgatgacg 614  Q
    ||||||||||||||| |||| |||||||||||| |||||| |||| ||||    
T  33771732 tgcatatattatacattgtccttaccaactgagttaagctcacgaggacg 33771683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 608
Target Start/End: Original strand, 41936406 - 41936475
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    |||| ||||||||||||| ||  | ||||||||| ||| |||| ||  ||||||||||||||||||||||    
T  41936406 gtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagcttacg 41936475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 46880068 - 46880003
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||||||||||  |||||||||||  || |||| ||  || |||||||||||||||    
T  46880068 gtgttcggggttcgaacctcggcctctgcatataaaatgcaatatccctatcaactgagctaagct 46880003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 602
Target Start/End: Complemental strand, 47098581 - 47098524
Alignment:
Q  545 ggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    |||||||||||||||  | ||||||| |||||||||||||  || |||||||||||||    
T  47098581 ggggttcgaacctcggcccctgcataaattatacaatgtccctatcaactgagctaag 47098524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 613
Target Start/End: Original strand, 47377355 - 47377416
Alignment:
Q  552 gaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgac 613  Q
    |||||||||||  || ||||||||| || |||| |||||||||||| |||||| ||||||||    
T  47377355 gaacctcgaaccttgtatatattatgcattgtccttaccaactgagttaagctcacgatgac 47377416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 52670152 - 52670217
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||||||||||  ||| |||||| ||| |||| ||  |||||||||| |||||||    
T  52670152 gtgttcggggttcgaacctcgacttctacatataatatgcaatatccctaccaactgaactaagct 52670217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 1149088 - 1149132
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || |||| ||||||||||||||||||| ||||    
T  1149088 tgcatatattatgcattgtccttaccaactgagctaagctcacga 1149132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 544 - 604
Target Start/End: Original strand, 3748606 - 3748666
Alignment:
Q  544 cggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||| | | | ||||||||| |||||||| ||  ||||||||||||||||||    
T  3748606 cggggttcgaaccccaacccctgcatataatatacaatatccctaccaactgagctaagct 3748666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 8174312 - 8174268
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||| | ||||| ||||||||||||||| |||||||    
T  8174312 tgcatatattatatattgtctctaccaactgagctaaacttacga 8174268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 16980373 - 16980417
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || |||| ||||||||||||||||||| ||||    
T  16980373 tgcatatattatgcattgtccttaccaactgagctaagctcacga 16980417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 21967598 - 21967554
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| |||| |||||||||||| |||||| ||||    
T  21967598 tgcatatattatacattgtccttaccaactgagttaagctcacga 21967554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 21990034 - 21989990
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| |||| |||||||||||| |||||| ||||    
T  21990034 tgcatatattatacattgtccttaccaactgagttaagctcacga 21989990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 564 - 604
Target Start/End: Complemental strand, 24430192 - 24430152
Alignment:
Q  564 ctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||| |||||||| ||| ||||||||||||||||||    
T  24430192 ctgcatataatatacaatatctctaccaactgagctaagct 24430152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 539 - 603
Target Start/End: Complemental strand, 32401561 - 32401498
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagc 603  Q
    |||| ||||||||||||| ||| | ||||||| |||||||||||||  ||||||||||| |||||    
T  32401561 gtgtccggggttcgaacc-cgacccctgcataaattatacaatgtccctaccaactgaggtaagc 32401498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 35863832 - 35863876
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||  | |||| ||||||||||||||||||||||||    
T  35863832 tgcatatattatgtattgtccttaccaactgagctaagcttacga 35863876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 51250252 - 51250296
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| |||| |||||||||||| |||||| ||||    
T  51250252 tgcatatattatacattgtccttaccaactgagttaagctcacga 51250296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 37320518 - 37320575
Alignment:
Q  547 ggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||||  |||||||||||| || ||||||||||||||||| ||||||    
T  37320518 ggttcgaacctcgaaccttgcatatattatgcattgtctttaccaactgagttaagct 37320575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 604
Target Start/End: Original strand, 36547238 - 36547293
Alignment:
Q  549 ttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||| |||| ||||||||||||||| | || |||||||||||||||||||    
T  36547238 ttcgaacctcaaactttgcatatattatacattatccttaccaactgagctaagct 36547293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 604
Target Start/End: Complemental strand, 23405260 - 23405202
Alignment:
Q  546 gggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||| ||| | ||||||||||||| |||||||  ||||||||||||||||||    
T  23405260 gggttcgaaccccgacccctgcatatattatgcaatgtccctaccaactgagctaagct 23405202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 24593444 - 24593379
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||| ||||||||||| || ||  |||||||||||| || |||| |||||||||||||||||||    
T  24593444 gtgttcagggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagct 24593379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 12303621 - 12303577
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||    
T  12303621 tgcatatattatacattgactttaccaactgagctaagctaacga 12303577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 612
Target Start/End: Complemental strand, 22608569 - 22608522
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacgatga 612  Q
    |||||||||||| || ||||| |||||||||||||||||| |||||||    
T  22608569 tgcatatattatgcattgtctctaccaactgagctaagctcacgatga 22608522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 604
Target Start/End: Original strand, 35429619 - 35429666
Alignment:
Q  557 tcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||||||||    
T  35429619 tcgaaccctgcataaattatgcaatgtctctaccaactgagctaagct 35429666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 604
Target Start/End: Original strand, 40099387 - 40099441
Alignment:
Q  549 ttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||| || |||||||||||| || |||| |||||||||||||||||||    
T  40099387 ttcgaacctcgacct-tgcatatattatgcattgtccttaccaactgagctaagct 40099441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 609
Target Start/End: Original strand, 11043811 - 11043853
Alignment:
Q  567 catatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||    
T  11043811 catatattatacactgtctttaccaactgagttaaacttacga 11043853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 609
Target Start/End: Original strand, 31048309 - 31048379
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||| ||||||||||| |||||||  |||||||| ||| || ||||||||||| |  ||||||||||||||    
T  31048309 gtgtccggggttcgaatctcgaaccttgcatataatatgcattgtctttaccagcgaagctaagcttacga 31048379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 609
Target Start/End: Original strand, 40896506 - 40896572
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||| ||  ||| || ||||||||| || ||||| |||||||||||||||||| ||||    
T  40896506 tcggggttcgaacttcagactttgtatatattatgcattgtctataccaactgagctaagctcacga 40896572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 566 - 608
Target Start/End: Original strand, 41492831 - 41492873
Alignment:
Q  566 gcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||    
T  41492831 gcataaattatgcaatgtctctaccaactgagctaagcttacg 41492873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 609
Target Start/End: Original strand, 44857233 - 44857303
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||| ||||||||||||||||  | ||||||||| ||| |||| ||  |||||||||||||||||| ||||    
T  44857233 gtgtccggggttcgaacctcggcccctgcatataatatgcaatatccctaccaactgagctaagctcacga 44857303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 3596321 - 3596256
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| ||| | ||||||| ||||| |||||||| | |||||| |||||||||    
T  3596321 gtgtccggggttcgaaccccgacccctgcataaattatgcaatgtctctgccaactaagctaagct 3596256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 4183247 - 4183182
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||||||| |||   ||||||||| ||| |||| ||  ||||||||||||||||||    
T  4183247 gtgttcggggttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctaagct 4183182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 609
Target Start/End: Complemental strand, 7206188 - 7206123
Alignment:
Q  544 cggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||  ||||||| ||  |||||||||||| || ||||| |||||||||||||||||| ||||    
T  7206188 cggggtttaaacctcggaccttgcatatattatgcattgtctctaccaactgagctaagctcacga 7206123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 7379599 - 7379664
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||  |||||||| ||| ||||||||||| ||| |||| || |||||||||||| ||||||    
T  7379599 gtgttcggaattcgaaccccgacctctgcatataatatgcaatatccttaccaactgagttaagct 7379664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 15939360 - 15939295
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||||||   | ||||||||||||||| |||||||| | |||| |||| ||||||    
T  15939360 gtgttcggggttcgaaccctaacctctgcatatattatgcaatgtctctgccaattgagttaagct 15939295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 609
Target Start/End: Complemental strand, 17560303 - 17560254
Alignment:
Q  560 aactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||||| ||||||  |||||||||||| |||||| ||||    
T  17560303 aactctgcatatattatgcaatgtacttaccaactgagttaagctcacga 17560254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 20120714 - 20120779
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| |||| || ||||| |||||  |||||||||||| || |||| |||||||||||||||||||    
T  20120714 gtgtccgggatttgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaagct 20120779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 24393313 - 24393248
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| |||||||||||||||  ||  |||||||||||| || |||| ||| |||||||||||||||    
T  24393313 gtgtccggggttcgaacctcagaccttgcatatattatgcattgtccttaacaactgagctaagct 24393248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 34903585 - 34903520
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| |||||||||||||||  ||  |||||||||||| || |||| ||||||||||| |||||||    
T  34903585 gtgtccggggttcgaacctcagaccttgcatatattatgcactgtccttaccaactgaactaagct 34903520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 7350588 - 7350544
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || ||||  |||||||||||||||||||||||    
T  7350588 tgcatatattatgcattgtccataccaactgagctaagcttacga 7350544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 17142872 - 17142828
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| ||||  |||||||||||||||||| ||||    
T  17142872 tgcatatattatacattgtcactaccaactgagctaagctcacga 17142828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 549 - 609
Target Start/End: Original strand, 35451246 - 35451306
Alignment:
Q  549 ttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||| || |||| ||||||||||||  | ||||| ||||||||||||||| |||||||    
T  35451246 ttcgaacttctaactttgcatatattatgtattgtctctaccaactgagctaaccttacga 35451306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 604
Target Start/End: Original strand, 30417608 - 30417668
Alignment:
Q  544 cggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||| ||||| |||||  ||||||||||||||| ||||| ||||||||||||||||||    
T  30417608 cggggtttgaaccccgaaccatgcatatattatacattgtctataccaactgagctaagct 30417668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 539 - 606
Target Start/End: Complemental strand, 444191 - 444125
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagctta 606  Q
    |||||||| ||||||||| |||||| ||||| |||||| || ||||||||||||||||||||| ||||    
T  444191 gtgttcggagttcgaaccccgaact-tgcatgtattatgcattgtctttaccaactgagctaaactta 444125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 539 - 609
Target Start/End: Original strand, 27750897 - 27750967
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||| |||||||||| || ||  |||||||||||| || |||| ||||||||||||||||||| ||||    
T  27750897 gtgttcgaggttcgaaccccggaccttgcatatattatgcactgtccttaccaactgagctaagctcacga 27750967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 609
Target Start/End: Complemental strand, 10152515 - 10152454
Alignment:
Q  548 gttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||| |||  ||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  10152515 gttcgaacctcaaaccttgcatattttatacattgtctataccaactgagctaagctcacga 10152454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 30623361 - 30623296
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||||||| |  ||  |||||||||||| || |||| |||||||||||||||||||    
T  30623361 gtgttcggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaagct 30623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 608
Target Start/End: Complemental strand, 7679960 - 7679901
Alignment:
Q  549 ttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    |||||||| |||||  |||||||||||| || ||||||| ||||||||| ||||||||||    
T  7679960 ttcgaaccccgaaccttgcatatattatgcattgtctttgccaactgagttaagcttacg 7679901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 614
Target Start/End: Complemental strand, 8137999 - 8137928
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgacg 614  Q
    |||||||| ||||| | |||| ||||||| |||| || ||||  ||||||||||||||||||||||| ||||    
T  8137999 tcggggtttgaaccccaaactttgcatattttatgcattgtccataccaactgagctaagcttacgaggacg 8137928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 604
Target Start/End: Original strand, 9655996 - 9656055
Alignment:
Q  545 ggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||| ||  ||||||| |||| || |||| |||||||||||||||||||    
T  9655996 ggggttcgaacctcggaccttgcatattttatgcattgtccttaccaactgagctaagct 9656055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 604
Target Start/End: Complemental strand, 39757027 - 39756972
Alignment:
Q  549 ttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||| |||||||||||||||||||||| | | |||||||||| || ||||||    
T  39757027 ttcgaaccacgaactctgcatatattatacattatttttaccaactaagttaagct 39756972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 604
Target Start/End: Original strand, 41188859 - 41188898
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  41188859 tgcatatattatacaatgtccttaccaactgaactaagct 41188898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 1342794 - 1342724
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| ||||||||| | || |||||| |||||| | ||| ||||||||||| |||||| ||||    
T  1342794 gtgttcggggtttgaacctcgacccctacatataatatacagtatctctaccaactgagttaagctcacga 1342724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 604
Target Start/End: Complemental strand, 13477957 - 13477903
Alignment:
Q  550 tcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||  |||||||||||| || |||| ||||||||| |||||||||    
T  13477957 tcgaacctcgaacattgcatatattatgcattgtccttaccaactcagctaagct 13477903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 609
Target Start/End: Original strand, 26192715 - 26192785
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||| ||||||||||||| ||| ||||||||||| ||| |||| ||  |||||||||| ||||||| ||||    
T  26192715 gtgtccggggttcgaaccccgacctctgcatataatatgcaatatccctaccaactgaactaagctcacga 26192785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 481082 - 481017
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| ||  | ||||||| ||||| |||||||  ||||||||||||||||||    
T  481082 gtgtccggggttcgaaccgcggcccctgcataaattatgcaatgtccctaccaactgagctaagct 481017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 5332987 - 5332922
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| |||   ||||||||| |||| ||| ||| ||||||||||||||||||    
T  5332987 gtgtccggggttcgaaccccgactcctgcatataatatataatatctctaccaactgagctaagct 5332922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 10083234 - 10083169
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||||||| | ||||||||| ||| |||| ||  ||||||||||| ||||||    
T  10083234 gtgtccggggttcgaacctcgacccctgcatataatatgcaatatccctaccaactgagttaagct 10083169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 608
Target Start/End: Original strand, 10587276 - 10587345
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    |||| ||| ||||||| ||||| || |||||||| ||| |||| ||  ||||||||||||||||||||||    
T  10587276 gtgtccggagttcgaatctcgacctttgcatataatatgcaatatccctaccaactgagctaagcttacg 10587345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 12700990 - 12701055
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||| |||||||||||| ||| |||||||||||| || |||  ||||||| |||||||||||    
T  12700990 gtgtccggagttcgaacctcggactttgcatatattatgcattgttattaccaattgagctaagct 12701055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 608
Target Start/End: Complemental strand, 34894440 - 34894371
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacg 608  Q
    |||| ||||||||||||| ||  | ||||||||| ||| |||| ||  ||||||||||||||||||||||    
T  34894440 gtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagcttacg 34894371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 37524214 - 37524271
Alignment:
Q  547 ggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||  ||||||||||| ||| |||| ||| ||||||||||||||||||    
T  37524214 ggtttgaacctcggcctctgcatataatatgcaatatctctaccaactgagctaagct 37524271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 539 - 607
Target Start/End: Original strand, 5328566 - 5328634
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttac 607  Q
    |||| ||||||||||||| ||  | ||||||||| ||| |||| ||  |||||||||||||||||||||    
T  5328566 gtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagctaagcttac 5328634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 548 - 600
Target Start/End: Complemental strand, 9071017 - 9070965
Alignment:
Q  548 gttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagcta 600  Q
    |||||||||||| ||  | ||||||||||||| |||| |||||||||||||||    
T  9071017 gttcgaacctcggaccttacatatattatacattgtccttaccaactgagcta 9070965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 13286173 - 13286129
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || ||||| |||||||||||||||||| ||||    
T  13286173 tgcatatattatgcattgtctataccaactgagctaagctcacga 13286129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 613
Target Start/End: Complemental strand, 16081348 - 16081300
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacgatgac 613  Q
    ||||| ||||||||| |||| ||| ||||||||||||||| ||||||||    
T  16081348 tgcatgtattatacattgtccttagcaactgagctaagctcacgatgac 16081300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 17704055 - 17704011
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || |||| ||||||||||||||||||| ||||    
T  17704055 tgcatatattatgcattgtccttaccaactgagctaagctcacga 17704011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 37015855 - 37015899
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || ||||| |||||||||||||||||| ||||    
T  37015855 tgcatatattatgcattgtctctaccaactgagctaagctcacga 37015899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.000000001; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 2539296 - 2539361
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| |||||||||||||||||||  ||||||||| || |  |||| |||||||||||||||||||    
T  2539296 gtgtccggggttcgaacctcgaacattgcatatatcatgcgttgtcattaccaactgagctaagct 2539361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 604
Target Start/End: Complemental strand, 19908756 - 19908695
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||||| ||  |||||||||||| || |||| |||||||||||| ||||||    
T  19908756 tcggggttcgaacctcggaccttgcatatattatgcattgtccttaccaactgagttaagct 19908695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 45139880 - 45139945
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||| ||  | ||||||| |||||||||||||  ||||||||||||||||||    
T  45139880 gtgtccggggttcgaaccccggcccctgcataaattatacaatgtccctaccaactgagctaagct 45139945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 604
Target Start/End: Complemental strand, 48171945 - 48171884
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||| |||||| ||||  ||||||||||||||| ||||| ||||||||||| ||||||    
T  48171945 tcggggtttgaacctagaaccttgcatatattatacattgtctctaccaactgagttaagct 48171884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 543 - 615
Target Start/End: Complemental strand, 32180894 - 32180822
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgacgg 615  Q
    |||||||||||||| |  ||| ||||||| |||| || ||||| |||||||||||||||||| |||| |||||    
T  32180894 tcggggttcgaaccccagactttgcatattttatgcattgtctataccaactgagctaagctcacgaggacgg 32180822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 602
Target Start/End: Original strand, 39669496 - 39669552
Alignment:
Q  546 gggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    ||||||||||  ||||||||||||||||||| ||||||   ||||||||||||||||    
T  39669496 gggttcgaactccgaactctgcatatattatgcaatgttcctaccaactgagctaag 39669552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 604
Target Start/End: Original strand, 42316822 - 42316882
Alignment:
Q  544 cggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||| ||  |||||||||||| || ||||||||||||||||| ||||||    
T  42316822 cgggattcgaacctcggaccttgcatatattatgcactgtctttaccaactgagttaagct 42316882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 598
Target Start/End: Original strand, 22530159 - 22530210
Alignment:
Q  547 ggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagc 598  Q
    |||||||||| ||| ||||||||| |||||||||||||| ||||||| ||||    
T  22530159 ggttcgaaccccgatctctgcataaattatacaatgtctctaccaaccgagc 22530210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 604
Target Start/End: Complemental strand, 31760288 - 31760249
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  31760288 tgcatatattatacattgtctataccaactgagctaagct 31760249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 602
Target Start/End: Original strand, 46409474 - 46409537
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    |||||| ||| |||||||  ||||| |||||||||||| || ||||||||||||||||| ||||    
T  46409474 gtgttcagggatcgaaccctgaactttgcatatattatgcattgtctttaccaactgagttaag 46409537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 614
Target Start/End: Complemental strand, 48955360 - 48955285
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgacg 614  Q
    ||||||| |||||||||| || ||| |||||||||||  || |||| |||||||||||| |||||| |||| ||||    
T  48955360 gtgttcgaggttcgaaccccggactttgcatatattacgcattgtccttaccaactgagataagctcacgaggacg 48955285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 605
Target Start/End: Complemental strand, 2629650 - 2629584
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagctt 605  Q
    |||||||||||||||||| ||| | ||||||| ||||| |||||||  | |||| ||||||||||||    
T  2629650 gtgttcggggttcgaaccccgacccctgcataaattatgcaatgtccctgccaattgagctaagctt 2629584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 613
Target Start/End: Complemental strand, 6520135 - 6520065
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgac 613  Q
    |||| ||||||||||| |||  |||||||||||| || ||||||||| ||||||| |||| | ||||||||    
T  6520135 tcggagttcgaacctcaaaccttgcatatattatgcattgtctttactaactgagttaagatcacgatgac 6520065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 617
Target Start/End: Complemental strand, 41521018 - 41520944
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacgatgacggtt 617  Q
    |||| ||| |||||| ||||  |||||||||||| || ||||| ||||||||||| |||||||| || |||||||    
T  41521018 tcggagtttgaaccttgaaccttgcatatattatgcattgtctctaccaactgagttaagcttatgaggacggtt 41520944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 602
Target Start/End: Original strand, 56551590 - 56551648
Alignment:
Q  544 cggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    ||||||| |||||||| ||  |||||||||||| || |||| |||||||||||||||||    
T  56551590 cggggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagctaag 56551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 609
Target Start/End: Original strand, 11314711 - 11314752
Alignment:
Q  568 atatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| |||||||| |||||||| |||||||||||    
T  11314711 atatattatacattgtctttatcaactgagttaagcttacga 11314752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 31852420 - 31852355
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| ||||||||||||||||  |  |||||| |||||||||||||  | ||||||||||||||||    
T  31852420 gtgtccggggttcgaacctcggcccttgcataaattatacaatgtccctgccaactgagctaagct 31852355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 34353850 - 34353785
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| |||||||||||||  || ||||||||||| ||| |||| ||  ||||||||||||||||||    
T  34353850 gtgtccggggttcgaaccctgacctctgcatataatatgcaatatccctaccaactgagctaagct 34353785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 604
Target Start/End: Complemental strand, 36479055 - 36478994
Alignment:
Q  543 tcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||||||||  | |||||||||| || ||||  ||||||| ||||||||||    
T  36479055 tcggggttcgaacctcgaaccttacatatattatgcattgtccataccaacagagctaagct 36478994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 38147550 - 38147606
Alignment:
Q  547 ggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||| |||||  ||||||||||||| | ||||||||||||||||| ||||||    
T  38147550 ggttcgaacc-cgaaccttgcatatattataaattgtctttaccaactgagttaagct 38147606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 42044045 - 42044110
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||| |||||||| |||||||  | ||||||| ||||| |||||||| | ||||||||||||||||    
T  42044045 gtgtccggggttcaaacctcggcccctgcataaattatgcaatgtctctgccaactgagctaagct 42044110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 48317717 - 48317782
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    |||||||||||||||||| |||||  || |||| ||||||| |||  |||||||||||| ||||||    
T  48317717 gtgttcggggttcgaaccccgaaccttgtatattttatacactgttcttaccaactgagttaagct 48317782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 7230322 - 7230278
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || |||| ||||||||||||||||||| ||||    
T  7230322 tgcatatattatgcattgtccttaccaactgagctaagctcacga 7230278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 604
Target Start/End: Original strand, 10529300 - 10529340
Alignment:
Q  565 tgcatatattatacaatgtc-tttaccaactgagctaagct 604  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  10529300 tgcatatattatacattgtcctttaccaactgagctaagct 10529340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 21317357 - 21317401
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || ||||| |||||||||||||||||| ||||    
T  21317357 tgcatatattatgcattgtctctaccaactgagctaagctcacga 21317401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 545 - 593
Target Start/End: Original strand, 33122347 - 33122395
Alignment:
Q  545 ggggttcgaacctcgaactctgcatatattatacaatgtctttaccaac 593  Q
    ||||||||||| |||  |||||||||||| || ||||||||||||||||    
T  33122347 ggggttcgaacttcggtctctgcatatataatgcaatgtctttaccaac 33122395  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 564 - 604
Target Start/End: Original strand, 33933763 - 33933803
Alignment:
Q  564 ctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||| |||||||  ||||||||||||||||||    
T  33933763 ctgcatatattatgcaatgtccctaccaactgagctaagct 33933803  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 43782324 - 43782368
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || |||| ||||||||||||||||| ||||||    
T  43782324 tgcatatattatgcattgtcattaccaactgagctaagtttacga 43782368  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 559 - 607
Target Start/End: Complemental strand, 44909872 - 44909824
Alignment:
Q  559 gaactctgcatatattatacaatgtctttaccaactgagctaagcttac 607  Q
    ||||| |||||||| ||| || ||||||||||||||||| |||||||||    
T  44909872 gaactttgcatatactatgcattgtctttaccaactgagttaagcttac 44909824  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 544 - 604
Target Start/End: Complemental strand, 46206643 - 46206583
Alignment:
Q  544 cggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||| | ||| | |||||||||| || |||||||  ||||||||||||||||||    
T  46206643 cggggttcgaatcccgacccctgcatatataatgcaatgtccctaccaactgagctaagct 46206583  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 567 - 615
Target Start/End: Complemental strand, 47266192 - 47266144
Alignment:
Q  567 catatattatacaatgtctttaccaactgagctaagcttacgatgacgg 615  Q
    ||||||||||||| ||||| |||||||||| |||| || ||||||||||    
T  47266192 catatattatacattgtctataccaactgatctaaactcacgatgacgg 47266144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 545 - 609
Target Start/End: Complemental strand, 49473707 - 49473643
Alignment:
Q  545 ggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    |||||||||||| || ||  |||||||||||| || |||| |||||||||| |||||||| ||||    
T  49473707 ggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgggctaagctcacga 49473643  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 540 - 604
Target Start/End: Original strand, 55853108 - 55853172
Alignment:
Q  540 tgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||||  ||  | ||||||||| ||| |||| ||| ||||||||||||||||||    
T  55853108 tgttcggggttcgaacaccggcccctgcatataatatgcaatatctctaccaactgagctaagct 55853172  T

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Target: scaffold0093 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 613
Target Start/End: Original strand, 23906 - 23938
Alignment:
Q  581 tgtctttaccaactgagctaagcttacgatgac 613  Q
    |||||||||||||||||||||||||||||||||    
T  23906 tgtctttaccaactgagctaagcttacgatgac 23938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 604
Target Start/End: Complemental strand, 18335 - 18296
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  18335 tgcatatattatacattgtccttaccaactgagctaagct 18296  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 602
Target Start/End: Complemental strand, 46011 - 45948
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaag 602  Q
    ||||||||||||||||||||| |   ||||||||||||||| | |  |||||||||||||||||    
T  46011 gtgttcggggttcgaacctcggatcttgcatatattatacattattcttaccaactgagctaag 45948  T

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Target: scaffold1709 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1709
Description:

Target: scaffold1709; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 242 - 177
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||| |||||||||||| ||  | ||||||||| ||| |||| ||| ||||||||||||||||||    
T  242 gtgtttggggttcgaaccccggcccctgcatataatatgcaatatctataccaactgagctaagct 177  T

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Target: scaffold1331 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 79 - 144
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||| |||||||||||| ||  | ||||||||| ||| |||| ||| ||||||||||||||||||    
T  79 gtgtttggggttcgaaccccggcccctgcatataatatgcaatatctataccaactgagctaagct 144  T

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Target: scaffold0250 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 604
Target Start/End: Complemental strand, 15076 - 15011
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagct 604  Q
    ||||| ||||||||||||  || | ||||||| ||||| |||||||  ||||||||||||||||||    
T  15076 gtgtttggggttcgaaccatgacccctgcataaattatgcaatgtccctaccaactgagctaagct 15011  T

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Target: scaffold1372 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold1372
Description:

Target: scaffold1372; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 539 - 603
Target Start/End: Complemental strand, 1935 - 1871
Alignment:
Q  539 gtgttcggggttcgaacctcgaactctgcatatattatacaatgtctttaccaactgagctaagc 603  Q
    |||| ||||||||||||||||  | ||||||||| ||| |||| ||  |||||||||||||||||    
T  1935 gtgtccggggttcgaacctcggcccctgcatataatatgcaatatccctaccaactgagctaagc 1871  T

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Target: scaffold0896 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 3183 - 3139
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||  | |||||||||||||||||||||||| ||||    
T  3183 tgcatatattatgtattgtctttaccaactgagctaagctcacga 3139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 56826 - 56782
Alignment:
Q  565 tgcatatattatacaatgtctttaccaactgagctaagcttacga 609  Q
    ||||||||||||||| ||||  |||||||||||||||||| ||||    
T  56826 tgcatatattatacattgtccataccaactgagctaagctcacga 56782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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