View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19856_high_32 (Length: 254)
Name: NF19856_high_32
Description: NF19856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19856_high_32 |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 12 - 231
Target Start/End: Complemental strand, 13923618 - 13923399
Alignment:
| Q |
12 |
cacagacacgacactgacaaatcgacataggtaataatttgagaaatatattatgtgtcagtgctatatagattcgattagattcaagatgaattcaaaa |
111 |
Q |
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| T |
13923618 |
cacagacacgacactgacaaatcgacataggtaataatttgagaaatatattatgtgtcagtgctatatagattcgattagattcaagatggattcaaaa |
13923519 |
T |
|
| Q |
112 |
agatcatgatgtatttacttacctcttgtgcttccttggtggttgcttctcagacttctttgtggttggatccgcacgaatggcagcacgcacctttttt |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
13923518 |
agatcatgatgtatttacttacctcttgtgcttccttggtggttgcttctcagacttctttgtggttggatccgcacgaatggaagcacgcacctttttt |
13923419 |
T |
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| Q |
212 |
gtatcgttcctcaatcccac |
231 |
Q |
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|||||||||||||||||||| |
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| T |
13923418 |
gtatcgttcctcaatcccac |
13923399 |
T |
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