View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19856_high_6 (Length: 510)
Name: NF19856_high_6
Description: NF19856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19856_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 401; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 15 - 500
Target Start/End: Complemental strand, 25399826 - 25399349
Alignment:
| Q |
15 |
aaaaaattgtactagtttacctagaatgttggaaagaaataacgttactaacttacttgtggcttcttagtcacaaccaacattctgttnnnnnnnnngt |
114 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
25399826 |
aaaaaattgtactagtttacctagaatgttggaaagaaataacgttactaacttacttgtggcttcttagtcacaaccaacattctgttaaaaaaaaagt |
25399727 |
T |
|
| Q |
115 |
cacaaccaacatttgtttttggagaagtacttcatctttagatgggaaataattaatctatttgagaggatttataaattatgatatatatttgtgannn |
214 |
Q |
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|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25399726 |
cacaaccaacatctgtttttggagaagtatttcatctttagatgggaaataattaatctatttgagaggatttataaattatgatatatatttgtgattt |
25399627 |
T |
|
| Q |
215 |
nnnnattaaacacctaaacatgatatgtattttttgagggaaaacatgataactatttttaatattttctttggagaactagagtgaaccgacaagtttg |
314 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25399626 |
ttttattaaaca--------tgatatgtattttttgagggaaaacatgataactatttttaatattttctttggagaactagagtgaaccgacaagtttg |
25399535 |
T |
|
| Q |
315 |
cactaagtaaatacaactcaaatgatatacattaatatttgaaatgcaagagtgtaggtttgaaaacattattccacgtttggtgtgtatgagtttcgtt |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25399534 |
cactaagtaaatacaactcaaatgatatacattaatatttgaaatgcaagagtgtaggtttgaaaacattattccacgtttggtgtgtatgagtttcgtt |
25399435 |
T |
|
| Q |
415 |
attacattatttaaaaagaaagaaatagtagtcattatgataacctttgtcactagagactattgtagtcattatgataacctttg |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25399434 |
attacattatttaaaaagaaagaaatagtagtcattatgataacctttgtcactagagactattgtagtcattatgataacctttg |
25399349 |
T |
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