View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19856_low_11 (Length: 390)
Name: NF19856_low_11
Description: NF19856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19856_low_11 |
 |  |
|
| [»] scaffold0438 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 325; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 43874885 - 43875266
Alignment:
| Q |
1 |
gttaatgttggcaaattcaannnnnnnggaaatatttgtatccgaccaaacaatatatcgtaaccagaaagattaagagaagttaatgtgtgacatgaaa |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43874885 |
gttaatgttggcaaattcaatttttttggaaatatttgtatccgaccaaacaatatatcgtaaccagaaagattaagagaagttaatgtgtgacatgaaa |
43874984 |
T |
 |
| Q |
101 |
agaagcaagagggaaagaggtcaatacaacaagggatatccattagtaagtgttggatgttgtgtgtgatagcatattttataataatttggaatatact |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43874985 |
agaagcaagagggaaagaggtcaatacaacaagggatatccattagtaagtgttggatattgtgtgtgatagcatattttataataatttggaatatact |
43875084 |
T |
 |
| Q |
201 |
tggctccatgtaatatgggcagtcaacatcgagagtgtgtatagtggttgagccatcgcaaagagataaaaattgagacaggaatacgctgaaagtttcc |
300 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
43875085 |
tggctcaatgtaatatcggcagtcaacatc--gagtgtgtatagtggttgagccatcgcaaagagataaaaattgagacaggaatacactgaaagtttcc |
43875182 |
T |
 |
| Q |
301 |
ttggtcctaaagtatgaagaacataatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43875183 |
ttggtcctaaagtat---gaacataatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
43875266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 28 - 390
Target Start/End: Original strand, 43867231 - 43867593
Alignment:
| Q |
28 |
ggaaatatttgtatccgaccaaacaatatatcgtaaccagaaagattaagagaagttaatgtgtgacatgaaaagaagcaagagggaaagaggtcaatac |
127 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
43867231 |
ggaaatattggtatctgaccaaacaatatatcgtaaccagaaagattaagagacgttaatgtgtgacacgaaaagaagcaagagggaaagaggtcaatac |
43867330 |
T |
 |
| Q |
128 |
aacaagggatatccattagtaagtgttggatgttgtgtgtgatagcatattttataataatttggaatatacttggctccatgtaatatgggcagtcaac |
227 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||| | ||||| ||||||||||| |||||||| | || ||||||| ||||||| |||||| ||| |
|
|
| T |
43867331 |
gacaagggaaattcattagtaagtgttggacattgtgggaaatagcgtattttataatcatttggaacaggctaggctccaagtaatataggcagtgaac |
43867430 |
T |
 |
| Q |
228 |
atcgagagtgtgtatagtggttgagccatcgcaaagagataaaaattgagacaggaatacgctgaaagtttccttggtcctaaagtatgaagaacataat |
327 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||| ||| || ||||||||||| ||||||| |||| |
|
|
| T |
43867431 |
atcgagagtgtgtatagtggttgagccatcgcgaagagataaaaagtgagacaggaattcggctaaacttttctcggtcctaaagttcgaagaacttaat |
43867530 |
T |
 |
| Q |
328 |
gtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttgagcg |
390 |
Q |
| |
|
|||| ||| ||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
43867531 |
gtaatagtaggaagacccttccagagagtgatccatcttttggacaaaatgcaagtttgagcg |
43867593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 43863729 - 43864099
Alignment:
| Q |
1 |
gttaatgttggcaaattcaannnnnnnggaaatatttgtatccgaccaaacaatatatcgtaaccagaaagattaagagaa-gttaatgtgtgacatgaa |
99 |
Q |
| |
|
||||||| |||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
43863729 |
gttaatgctggcaaattcaaatgttttggaaatattggtatctgaccaaacaatatatcgtaaccagaaagataaagagaccgttaatgtgtgacatgaa |
43863828 |
T |
 |
| Q |
100 |
aagaagcaagagggaaagaggtcaatacaacaagggatatccattagtaagtgttggatgttgtgtgtgatagcatattttataataatttggaatatac |
199 |
Q |
| |
|
|||||| ||||||||||||| | ||||||||| || ||||||||||||| | ||| | ||||||||||| |||| ||||| | |
|
|
| T |
43863829 |
aagaaggaagagggaaagag------aaaacaagggaaattcattagtaagtgt------------gaaataacgtattttataatcattttgaataggc |
43863910 |
T |
 |
| Q |
200 |
ttggctccatgtaatatgggcagtcaacatcgagagtgtgtatagtggttgagccatcgcaaagagataaaaattgagacaggaatacgctgaaagtttc |
299 |
Q |
| |
|
||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||| |||| |
|
|
| T |
43863911 |
ttggctccaaggaatatgggcagtaaacatcgagagtgtgtatagtggttgagccatcgcgaagagataaaaattgagacagaaattcgcttaaactttc |
43864010 |
T |
 |
| Q |
300 |
cttggtcctaaagtatgaagaacataatgtaa-gagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43864011 |
cttggtcctaaagtttgaagaacttaatgtaattagtaggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
43864099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 38989233 - 38989152
Alignment:
| Q |
306 |
cctaaagtatgaagaacataatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
|||| |||||||||| | | ||||| ||||| |||||||||||| ||| ||||||||||||||||||||| ||| |||||| |
|
|
| T |
38989233 |
cctagagtatgaagatctaagtgtaatagtggaaagactcttccagagaatgatccatcttttggacaaaacgcatgtttga |
38989152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 38989477 - 38989423
Alignment:
| Q |
62 |
aaccagaaagattaagagaagttaatgtgtgacatgaaaagaagcaagagggaaa |
116 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||||| |||||| ||||| |
|
|
| T |
38989477 |
aaccagaaagattaagagactttaaagtgtgacatgaaaagaggcaagacggaaa |
38989423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 52186946 - 52186865
Alignment:
| Q |
306 |
cctaaagtatgaagaacataatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
52186946 |
cctaaagtatgaagaacttagtgtaagagtgggaagactcctccagagaatgatccatcttttggacaaaatgcaggtttga |
52186865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 52187191 - 52187136
Alignment:
| Q |
62 |
aaccagaaagattaagagaagttaatgtgtgacatgaaaagaagcaagagggaaag |
117 |
Q |
| |
|
||||||||||||||||||| ||||| ||| |||||||||||| |||||| |||||| |
|
|
| T |
52187191 |
aaccagaaagattaagagacgttaaagtgcgacatgaaaagatgcaagaaggaaag |
52187136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 307 - 386
Target Start/End: Original strand, 778167 - 778246
Alignment:
| Q |
307 |
ctaaagtatgaagaacataatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttg |
386 |
Q |
| |
|
||||||| |||||||| ||||||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
778167 |
ctaaagtgtgaagaacttaatgtaagagtgggtagaattttccagagattgatccatcttttggacaaaatgcaagtttg |
778246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 303 - 387
Target Start/End: Complemental strand, 481073 - 480989
Alignment:
| Q |
303 |
ggtcctaaagtatgaagaacataatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
||||||||||| |||||||| ||| ||||| ||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
481073 |
ggtcctaaagtttgaagaacttaaggtaagcgtgggaagagtcttccagagattgatccatcttttggataaaatacaagtttga |
480989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 387
Target Start/End: Complemental strand, 476161 - 476077
Alignment:
| Q |
303 |
ggtcctaaagtatgaagaacataatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
||||||||||| |||||||| || |||||| ||||||||| | ||||| |||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
476161 |
ggtcctaaagtttgaagaacttagtgtaagggtgggaagagtattccagagattgatccatcttttggataaaatacaagtttga |
476077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 777904 - 777976
Alignment:
| Q |
44 |
gaccaaacaatatatcgtaaccagaaagattaagagaagttaatgtgtgacatgaaaagaagcaagagggaaa |
116 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||| ||||| || ||||||||||||||||| || ||||| |
|
|
| T |
777904 |
gaccaaacaatatatggaaaccagaaagattaagagacgttaaagtttgacatgaaaagaagcatgatggaaa |
777976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 387
Target Start/End: Complemental strand, 1186332 - 1186269
Alignment:
| Q |
324 |
taatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
|||||||||||||| |||| ||||||| ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
1186332 |
taatgtaagagtggaaagagtcttccagagattgatccatcttttcgataaaatgcaagtttga |
1186269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 387
Target Start/End: Complemental strand, 1204396 - 1204333
Alignment:
| Q |
324 |
taatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
|||||||||||||| |||| ||||||| ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
1204396 |
taatgtaagagtggaaagagtcttccagagattgatccatcttttcgataaaatgcaagtttga |
1204333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 387
Target Start/End: Original strand, 1304694 - 1304757
Alignment:
| Q |
324 |
taatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
|||||||||||||| |||| ||||||| ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
1304694 |
taatgtaagagtggaaagagtcttccagagattgatccatcttttcgataaaatgcaagtttga |
1304757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 5361015 - 5361077
Alignment:
| Q |
324 |
taatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttg |
386 |
Q |
| |
|
||||| |||||| |||||| ||||||| |||||| ||||||||||||| |||||||||||||| |
|
|
| T |
5361015 |
taatgcaagagttggaagagtcttccagagattggtccatcttttggataaaatgcaagtttg |
5361077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 387
Target Start/End: Original strand, 13490896 - 13490975
Alignment:
| Q |
308 |
taaagtatgaagaacataatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
|||||||||||| | ||||||||| ||||||||| ||||||| | ||| ||||||||||||| ||||| |||||||| |
|
|
| T |
13490896 |
taaagtatgaagcaattaatgtaagggtgggaagattcttccatacattcttccatcttttggataaaattaaagtttga |
13490975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 1186596 - 1186544
Alignment:
| Q |
63 |
accagaaagattaagagaagttaatgtgtgacatgaaaagaagcaagagggaa |
115 |
Q |
| |
|
||||| |||||||||||| ||||| |||||| |||||||||| || ||||||| |
|
|
| T |
1186596 |
accagtaagattaagagacgttaaagtgtgagatgaaaagaaacaggagggaa |
1186544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 1204660 - 1204608
Alignment:
| Q |
63 |
accagaaagattaagagaagttaatgtgtgacatgaaaagaagcaagagggaa |
115 |
Q |
| |
|
||||| |||||||||||| ||||| |||||| |||||||||| || ||||||| |
|
|
| T |
1204660 |
accagtaagattaagagacgttaaagtgtgagatgaaaagaaacaggagggaa |
1204608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 1304430 - 1304482
Alignment:
| Q |
63 |
accagaaagattaagagaagttaatgtgtgacatgaaaagaagcaagagggaa |
115 |
Q |
| |
|
||||| |||||||||||| ||||| |||||| |||||||||| || ||||||| |
|
|
| T |
1304430 |
accagtaagattaagagacgttaaagtgtgagatgaaaagaaacaggagggaa |
1304482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 7033557 - 7033517
Alignment:
| Q |
67 |
gaaagattaagagaagttaatgtgtgacatgaaaagaagca |
107 |
Q |
| |
|
||||| |||||||||||||| |||| ||||||||||||||| |
|
|
| T |
7033557 |
gaaagtttaagagaagttaaagtgttacatgaaaagaagca |
7033517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 387
Target Start/End: Complemental strand, 7126036 - 7125964
Alignment:
| Q |
315 |
tgaagaacataatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
||||||| ||||||||| || ||||||| ||||| ||||| |||||||||||||||| || ||||||||| |
|
|
| T |
7126036 |
tgaagaaattaatgtaagggttggaagacgtttccagagattcttccatcttttggacaagatacaagtttga |
7125964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0438 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0438
Description:
Target: scaffold0438; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 324 - 387
Target Start/End: Complemental strand, 5418 - 5355
Alignment:
| Q |
324 |
taatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||| |
|
|
| T |
5418 |
taatgtaagagtgggaagagtcttccagagattgatccatcttttggataaaatgcatgtttga |
5355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 324 - 387
Target Start/End: Original strand, 33958061 - 33958124
Alignment:
| Q |
324 |
taatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
33958061 |
taatgtaagagtgtgaagagtcttccagagattgatccatcttttggataaaatgcaagtttga |
33958124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 329 - 387
Target Start/End: Complemental strand, 6844223 - 6844165
Alignment:
| Q |
329 |
taagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||||| | ||||||||||||| |
|
|
| T |
6844223 |
taagagtgggaagatgtttccaaagattgttccatcttttggatagaatgcaagtttga |
6844165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 387
Target Start/End: Complemental strand, 32413712 - 32413662
Alignment:
| Q |
337 |
ggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
||||||| |||||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
32413712 |
ggaagacgcttccagagattcttccatcttgtggacaaaatgcaagtttga |
32413662 |
T |
 |
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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 387
Target Start/End: Original strand, 9235846 - 9235887
Alignment:
| Q |
346 |
ttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
|||||||||||| ||||||||||||| | ||||||||||||| |
|
|
| T |
9235846 |
ttccaaagattgttccatcttttggagagaatgcaagtttga |
9235887 |
T |
 |
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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 387
Target Start/End: Complemental strand, 6889256 - 6889184
Alignment:
| Q |
315 |
tgaagaacataatgtaagagtgggaagactcttccaaagattgatccatcttttggacaaaatgcaagtttga |
387 |
Q |
| |
|
|||||||| |||| |||| || |||||| ||||| |||||| ||||||||||||| | ||||||||||||| |
|
|
| T |
6889256 |
tgaagaacttaatataagggtaggaagatatttccagagattgttccatcttttggatagaatgcaagtttga |
6889184 |
T |
 |
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Target: chr6 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 7175105 - 7175145
Alignment:
| Q |
66 |
agaaagattaagagaagttaatgtgtgacatgaaaagaagc |
106 |
Q |
| |
|
|||||| |||||||| ||||| ||||||||||||||||||| |
|
|
| T |
7175105 |
agaaaggttaagagatgttaaagtgtgacatgaaaagaagc |
7175145 |
T |
 |
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