View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19856_low_14 (Length: 360)
Name: NF19856_low_14
Description: NF19856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19856_low_14 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 20592188 - 20592535
Alignment:
| Q |
1 |
tgatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgc |
99 |
Q |
| |
|
||||||||||||||||| |||||||||| |||| |||| |||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
20592188 |
tgatttctcctgaaagaaccttatctctcacaaagtgatagtcgatctctatgtgcttggttctttcatggaaaactggattggaagctatatgtagtgc |
20592287 |
T |
 |
| Q |
100 |
atcttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttgctgctgcc |
199 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| ||||||||||| ||||||| |
|
|
| T |
20592288 |
tgcttgattgtcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgccttagccacgtgaattcacaagttgatgctgcc |
20592387 |
T |
 |
| Q |
200 |
ataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctg |
299 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| ||||| |||||||| || | ||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
20592388 |
atagcacgatattcggcttctgcactagaccttgcaactatgttctgtttcttgctcctccatgagatcaaattccatccaatgaggacacaataccctg |
20592487 |
T |
 |
| Q |
300 |
aggtggaccttctatctgttggtgaacctgcccaatcaacatcagaat |
347 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
20592488 |
aggtggaccttctatctgctggtgaacctgcccaatcagtatcagaat |
20592535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 19314427 - 19314340
Alignment:
| Q |
2 |
gatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagca |
89 |
Q |
| |
|
||||||| |||||||| || ||||||| ||| ||||||||| |||||||||||||||||||||||| | |||| ||||||||||||| |
|
|
| T |
19314427 |
gatttcttctgaaagaatctaatctcttgcaaagtgacagtcgatctctatgtgcttagttctttcaagaaaaaatgggttggaagca |
19314340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 22160603 - 22160950
Alignment:
| Q |
1 |
tgatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgc |
99 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
22160603 |
tgatttctcttgaaagaaccttatctcttacaaagtgacagtcgatctctatgtgcttggttctttcatggaaaactggattggaagctatatgtagtgc |
22160702 |
T |
 |
| Q |
100 |
atcttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttgctgctgcc |
199 |
Q |
| |
|
|| | || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||||||| | ||||| |
|
|
| T |
22160703 |
tgctcgattgtcacatattagcttcattgccttgacatctccaaatttgagttgttggagtaattgccttagccacgtgagttcacaagttgttactgcc |
22160802 |
T |
 |
| Q |
200 |
ataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctg |
299 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||||| || || |||||||| || | ||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
22160803 |
atagcacgatattcggcttctacactagaccttgcaactatattctgtttcttgctcctccatgagatcaaattccctccaatgaggacacaataccctg |
22160902 |
T |
 |
| Q |
300 |
aggtggaccttctatctgttggtgaacctgcccaatcaacatcagaat |
347 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||| ||||||||| |
|
|
| T |
22160903 |
aggtggaccttctatctgctggtgaacctgcctaatcagcatcagaat |
22160950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 34611736 - 34611392
Alignment:
| Q |
4 |
tttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagca-tatgtagtgcatc |
102 |
Q |
| |
|
|||||||||||||| | ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||| |||| |||||| | |
|
|
| T |
34611736 |
tttctcctgaaagaactttatctcttacaaagtgacagtcgatctctatgtgcttagttctttcatgaaaaaccgggttggaggcaatatgcagtgcagc |
34611637 |
T |
 |
| Q |
103 |
ttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttgctgctgccata |
202 |
Q |
| |
|
|||||| ||| | ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | |
|
|
| T |
34611636 |
ttggttgtcagagattagtttcattaccttgacgtctcctaatttgagttgttggagtaattgtcttagccatgtgagttcacaagttgttgctgccaca |
34611537 |
T |
 |
| Q |
203 |
acacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctgagg |
302 |
Q |
| |
|
||| | ||| ||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||| ||||||||||||||| ||||| | | |
|
|
| T |
34611536 |
tcacaactttctgcttctgcactagaccttgcaactatgttctgtttcttgctctgccatgagatcaaattttttccaatgaggacacaacacccttaag |
34611437 |
T |
 |
| Q |
303 |
tggaccttctatctgttggtgaacctgcccaatcaacatcagaat |
347 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
34611436 |
tggaccttctatctgctggtgaacctgcccaatcagcatcagaat |
34611392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 30666478 - 30666303
Alignment:
| Q |
1 |
tgatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgc |
99 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30666478 |
tgatttcttctgaaagtaccttatctcttacaaagtgacagtcgatctctatgtgcttagttctttcatggaaaactgggttggaagcgatatgtagtgt |
30666379 |
T |
 |
| Q |
100 |
atcttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccat |
175 |
Q |
| |
|
| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
30666378 |
agcttggttgtcacatattagattcattgccttgacatctcctaatttgagatgttggagtaattgtcttagccat |
30666303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 197 - 347
Target Start/End: Complemental strand, 30666307 - 30666157
Alignment:
| Q |
197 |
gccataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtacc |
296 |
Q |
| |
|
|||||| |||||||||| ||||| ||||||||||||||||| ||||||||||||| || ||||||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
30666307 |
gccatagcacgatattcagcttcagcactagaccttgcaactttgttttgtttcttgctccgccatgagatcaaattacctccaatgaggacacaatacc |
30666208 |
T |
 |
| Q |
297 |
ctgaggtggaccttctatctgttggtgaacctgcccaatcaacatcagaat |
347 |
Q |
| |
|
||||| |||| | ||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
30666207 |
ttgaggcggacttactatctgctggtgaacctgcccaatcagcatcagaat |
30666157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 35268371 - 35268418
Alignment:
| Q |
35 |
gtgacagtcaatctctatgtgcttagttctttcatggaaaactgggtt |
82 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| ||||||||||| |
|
|
| T |
35268371 |
gtgacagtcaatctctaagtgctttgttctttcatgaaaaactgggtt |
35268418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 178; Significance: 6e-96; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 817207 - 817535
Alignment:
| Q |
1 |
tgatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgc |
99 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||| | ||| |||| ||||||||||| |
|
|
| T |
817207 |
tgatttctcctgaaagaaccttatctcttacaaagtggcagtcgatctctatgtgcttggttctttcatggaaaactagattgaaagctatatgtagtgc |
817306 |
T |
 |
| Q |
100 |
atcttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttgctgctgcc |
199 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| ||||||||||||||||||| |
|
|
| T |
817307 |
tgcttgattgtcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgccttagccacgtgaattcacaagttgctgctgcc |
817406 |
T |
 |
| Q |
200 |
ataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctg |
299 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| ||||| |||||||| || | ||||||||||||||| |||| || |
|
|
| T |
817407 |
atagcacgatattcggcttctgcactagaccttgcaactatgttctgtttcttgct-------------------cctccaatgaggacacaataccatg |
817487 |
T |
 |
| Q |
300 |
aggtggaccttctatctgttggtgaacctgcccaatcaacatcagaat |
347 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
817488 |
aggtggaccttctatctgctggtgaacctgcccaatcagcatcagaat |
817535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 31323987 - 31323728
Alignment:
| Q |
19 |
ccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagca-tatgtagtgcatcttggttatcacatat |
117 |
Q |
| |
|
|||| ||||||| || ||| |||||||| |||| || ||| |||| ||||||| ||||| ||||||||| |||| |||||| | |||||||| | || |
|
|
| T |
31323987 |
ccttgtctcttaaaaagtggcagtcaatgtctacgttcttccttctctcatggagtactggattggaagcaatatgaagtgcagccaggttatcagaaat |
31323888 |
T |
 |
| Q |
118 |
tagcttcattgccttgacatctcctaatttgagttg-------ttggagtaattgtcttatccatgtgagttcacaagttgctgctgccataacacgata |
210 |
Q |
| |
|
||| ||||||||||||| ||||| ||| || ||||| | |||||||||||||| |||||| |||||||||| || |||| ||||| || |||| |
|
|
| T |
31323887 |
tagtttcattgccttgatatctcttaactttagttgcaagagcctagagtaattgtcttagccatgtaagttcacaagatgttgctaccatagcaagata |
31323788 |
T |
 |
| Q |
211 |
ttcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaa |
270 |
Q |
| |
|
|| | ||||||||| || ||| ||| |||| ||| ||||| || ||| |||| ||||| |
|
|
| T |
31323787 |
ctctgattctgcactcgaagttgaaactatgtattgcttcttgctccgcgatgatatcaa |
31323728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 312
Target Start/End: Complemental strand, 17726759 - 17726655
Alignment:
| Q |
208 |
atattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctgaggtggac |
307 |
Q |
| |
|
|||||| || |||||||| || || ||||| | ||||| ||||||||| |||||| |||||||| | ||||||||| ||||| || || || |||||| |
|
|
| T |
17726759 |
atattctgcctctgcacttgatctagcaacgacattttgcttcttacttttccatgaaatcaaattgcctccaatgagaacacaatatccagatgtggac |
17726660 |
T |
 |
| Q |
308 |
cttct |
312 |
Q |
| |
|
||||| |
|
|
| T |
17726659 |
cttct |
17726655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 148; Significance: 5e-78; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 53 - 347
Target Start/End: Original strand, 24181385 - 24181678
Alignment:
| Q |
53 |
gtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgcatcttggttatcacatattagcttcattgccttgacatctcctaatttgagt |
151 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
24181385 |
gtgcttagttctttcatggaaaattgggttggaagcgatatgtagtgctatttggttgtcacatattagtttcattgccttgacatctcctaatttgagt |
24181484 |
T |
 |
| Q |
152 |
tgttggagtaattgtcttatccatgtgagttcacaagttgctgctgccataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttct |
251 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||| ||||| ||||||| ||| ||||| | |||||||| ||| ||||||||| ||||| ||||||| |
|
|
| T |
24181485 |
tgttggagtaa-tgtcttagccatgtgagttcacaatttgctattgccatagcacaatatttgacttctgca-taggccttgcaactatgttctgtttct |
24181582 |
T |
 |
| Q |
252 |
tacttcgccatgagatcaaattccgtccaatgaggacacagtaccctgaggtggaccttctatctgttggtgaacctgcccaatcaacatcagaat |
347 |
Q |
| |
|
| || ||||||||||||||||| | |||||||||||||| |||||||||||| ||||||| || ||||||||||||||||| ||||||||| |
|
|
| T |
24181583 |
tgctccgccatgagatcaaatttcccccaatgaggacacaacgccctgaggtggatcttctatttgcaagtgaacctgcccaatcagcatcagaat |
24181678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 47056685 - 47056413
Alignment:
| Q |
1 |
tgatttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagcata-tgtagtgc |
99 |
Q |
| |
|
||||||||||||||| | | ||||| ||||||| || ||||| |||||||| ||||||||| |||| || ||| ||||||| ||| | ||||||| |
|
|
| T |
47056685 |
tgatttctcctgaaaaaacattatcccttacaaagtctcagtccatctctatccatttagttcttgcatgaaagactaggttggatgcaaaatgtagtgt |
47056586 |
T |
 |
| Q |
100 |
atcttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttgctgctgcc |
199 |
Q |
| |
|
| ||| ||| ||||||||||| |||| | ||||||| ||||||||||| || ||| |||||| |||||||| || |||||||||||||||| ||||||| |
|
|
| T |
47056585 |
agcttcgttgtcacatattagtttcaataccttgacgtctcctaattttagctgtaggagtatttgtcttaatcacgtgagttcacaagttgatgctgcc |
47056486 |
T |
 |
| Q |
200 |
ataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaat |
272 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||| |||| ||||| | ||||||||| || | |||||||||| |
|
|
| T |
47056485 |
ataatacgatattctgcttctgcactagacctttcaactatgttctatttcttactccgtaacgagatcaaat |
47056413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 47065760 - 47065571
Alignment:
| Q |
3 |
atttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagcatatgtagtgcat- |
101 |
Q |
| |
|
||||||| |||||||||| |||||| ||||| |||||| |||| |||||||||||||| ||||||||| || ||| ||||||| || ||||| |||| |
|
|
| T |
47065760 |
atttctcttgaaagagccatatctcgtacaaagtgacattcaagctctatgtgcttagctctttcatgaaagactaggttggataca-atgtatagcata |
47065662 |
T |
 |
| Q |
102 |
-cttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttggagtaattgtcttatccatgtgagttcacaagttg |
191 |
Q |
| |
|
||| || |||||||| || |||||||||| || |||||||||| ||| ||||||||||||||||||| | | ||||||||||||||| |
|
|
| T |
47065661 |
gtttgattgtcacatataagtttcattgcctaaacgtctcctaattcgagctgttggagtaattgtcttaactacatgagttcacaagttg |
47065571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 47065569 - 47065477
Alignment:
| Q |
208 |
atattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacacagtaccctga |
300 |
Q |
| |
|
|||||| ||||||||||||||||||| ||| | || | ||||||||| ||| |||||||| |||| | |||||| | |||||| |||||||| |
|
|
| T |
47065569 |
atattctgcttctgcactagaccttgtaactacattctatttcttactccgcaatgagatctaatttcctccaataacgacacaataccctga |
47065477 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 9187981 - 9187883
Alignment:
| Q |
193 |
tgctgccataacacgatattcggcttctgcactagaccttgcaacaatgttttgtttcttacttcgccatgagatcaaattccgtccaatgaggacaca |
291 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||| |||||| ||||||||||||| |||| ||||||||||| ||| | |||||| || ||||| |
|
|
| T |
9187981 |
tgctgccatagcacgatattcagcttctgcactagatagtgcaaccctgttttgtttcttgcttctccatgagatcatatttcctccaataagaacaca |
9187883 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 9188149 - 9188090
Alignment:
| Q |
26 |
tcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttgga |
85 |
Q |
| |
|
||||||| |||||| || |||||||||||||| |||| ||||||||||||||| ||||| |
|
|
| T |
9188149 |
tcttacatagtgacaatctatctctatgtgcttggttcgttcatggaaaactggattgga |
9188090 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 16064 - 16209
Alignment:
| Q |
4 |
tttctcctgaaagagccttatctcttacaatgtgacagtcaatctctatgtgcttagttctttcatggaaaactgggttggaagc-atatgtagtgcatc |
102 |
Q |
| |
|
|||||||||||||| | |||||||| |||| || ||| |||| |||| || ||||||||||||| ||||||||||| |||| |||||||| | |
|
|
| T |
16064 |
tttctcctgaaagaactttatctctcacaaagtagcagatgatctatatgagc-tagttctttcatgagaaactgggttgaaagcaatatgtag-----c |
16157 |
T |
 |
| Q |
103 |
ttggttatcacatattagcttcattgccttgacatctcctaatttgagttgt |
154 |
Q |
| |
|
|||||||| | | |||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
16158 |
ttggttataaaaaattagcttaattgccttgagatctcctaatttgagttgt |
16209 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 16384 - 16330
Alignment:
| Q |
103 |
ttggttatcacatattagcttcattgccttgacatctcctaatttgagttgttgg |
157 |
Q |
| |
|
|||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
16384 |
ttggttgtcacaaattagtttcatcaccttggcatctcctaatttgagttgttgg |
16330 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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