View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19856_low_51 (Length: 209)
Name: NF19856_low_51
Description: NF19856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19856_low_51 |
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Alignment Details
Target: chr4 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 10399739 - 10399620
Alignment:
| Q |
16 |
aatataagatcaagataacatacatcatcattagctttgttatcatccatagatctgcatgttgaatcagaaagcacctcaatagaagccatagaaattg |
115 |
Q |
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| T |
10399739 |
aatataagatcaagataacatacatcatcattagctttgttatcatccatagatctgcatgttgaatcagaaagcacctcaatagaagccatagaaattg |
10399640 |
T |
|
| Q |
116 |
gtctcctcttctaaatggaa |
135 |
Q |
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||||| |||||||||||||| |
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| T |
10399639 |
gtctcttcttctaaatggaa |
10399620 |
T |
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