View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19857_high_29 (Length: 343)

Name: NF19857_high_29
Description: NF19857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19857_high_29
NF19857_high_29
[»] chr1 (23 HSPs)
chr1 (1-257)||(4640528-4640774)
chr1 (183-257)||(4641736-4641810)
chr1 (190-250)||(38931321-38931381)
chr1 (185-263)||(43316351-43316429)
chr1 (209-258)||(11032219-11032268)
chr1 (185-258)||(29334213-29334286)
chr1 (209-250)||(48835097-48835138)
chr1 (209-257)||(11031431-11031479)
chr1 (186-250)||(27418171-27418234)
chr1 (208-250)||(30466189-30466231)
chr1 (203-257)||(36272541-36272595)
chr1 (185-257)||(6766974-6767046)
chr1 (190-270)||(38932109-38932189)
chr1 (211-250)||(2687729-2687768)
chr1 (203-257)||(6768112-6768166)
chr1 (210-259)||(11426851-11426900)
chr1 (186-250)||(32537652-32537716)
chr1 (209-250)||(41884229-41884270)
chr1 (209-258)||(45922231-45922280)
chr1 (218-258)||(1184977-1185017)
chr1 (109-148)||(1623946-1623986)
chr1 (187-250)||(43755856-43755919)
chr1 (209-257)||(47334900-47334948)
[»] chr6 (9 HSPs)
chr6 (183-258)||(34035018-34035093)
chr6 (183-250)||(34034175-34034242)
chr6 (195-243)||(24125986-24126034)
chr6 (188-250)||(25371176-25371238)
chr6 (187-259)||(7635122-7635194)
chr6 (185-250)||(25067826-25067891)
chr6 (209-257)||(16764925-16764973)
chr6 (187-250)||(18290222-18290285)
chr6 (187-250)||(18290473-18290536)
[»] chr4 (27 HSPs)
chr4 (182-260)||(22499095-22499173)
chr4 (183-250)||(22499948-22500015)
chr4 (209-250)||(25970113-25970154)
chr4 (195-263)||(34154788-34154856)
chr4 (209-257)||(36450728-36450776)
chr4 (195-243)||(47377584-47377632)
chr4 (195-250)||(232035-232090)
chr4 (195-258)||(23425193-23425256)
chr4 (209-244)||(34371475-34371510)
chr4 (195-250)||(39429923-39429978)
chr4 (195-258)||(39652045-39652108)
chr4 (195-257)||(39429225-39429287)
chr4 (209-258)||(38009283-38009332)
chr4 (209-257)||(45330565-45330613)
chr4 (186-261)||(23383306-23383381)
chr4 (209-243)||(6246798-6246832)
chr4 (188-250)||(34155605-34155667)
chr4 (209-258)||(25970803-25970852)
chr4 (209-258)||(33369908-33369957)
chr4 (209-250)||(33370875-33370916)
chr4 (186-250)||(39412772-39412836)
chr4 (210-251)||(55514355-55514396)
chr4 (187-250)||(5235381-5235444)
chr4 (187-250)||(20174977-20175040)
chr4 (209-257)||(30808621-30808669)
chr4 (209-257)||(47326789-47326837)
chr4 (209-257)||(47341585-47341633)
[»] chr2 (16 HSPs)
chr2 (185-258)||(7868117-7868190)
chr2 (186-250)||(36390964-36391028)
chr2 (187-258)||(5005461-5005532)
chr2 (203-260)||(34617650-34617707)
chr2 (195-258)||(20991286-20991349)
chr2 (195-250)||(36391658-36391713)
chr2 (183-258)||(38780038-38780113)
chr2 (209-250)||(6084878-6084919)
chr2 (209-250)||(23875247-23875288)
chr2 (210-250)||(23876064-23876104)
chr2 (195-250)||(20992005-20992060)
chr2 (189-250)||(15602800-15602861)
chr2 (210-250)||(6085702-6085742)
chr2 (187-250)||(16903875-16903938)
chr2 (187-250)||(30899397-30899460)
chr2 (209-257)||(37546564-37546612)
[»] chr3 (23 HSPs)
chr3 (186-250)||(45501271-45501335)
chr3 (209-250)||(49161808-49161849)
chr3 (186-250)||(8653697-8653761)
chr3 (195-250)||(51421661-51421716)
chr3 (209-250)||(33455781-33455822)
chr3 (209-266)||(53714416-53714473)
chr3 (186-250)||(8652817-8652881)
chr3 (188-250)||(33968188-33968250)
chr3 (215-251)||(26836352-26836388)
chr3 (209-257)||(43768026-43768074)
chr3 (195-250)||(43768745-43768800)
chr3 (186-257)||(44406936-44407007)
chr3 (190-257)||(51420861-51420928)
chr3 (188-250)||(45297556-45297618)
chr3 (183-257)||(52399002-52399076)
chr3 (187-259)||(5113196-5113268)
chr3 (186-250)||(20586079-20586143)
chr3 (209-250)||(33454873-33454914)
chr3 (187-250)||(20586562-20586625)
chr3 (187-250)||(26006153-26006216)
chr3 (187-258)||(45000805-45000876)
chr3 (210-250)||(49160994-49161034)
chr3 (183-251)||(52398329-52398397)
[»] scaffold2003 (1 HSPs)
scaffold2003 (185-258)||(507-580)
[»] chr7 (21 HSPs)
chr7 (209-250)||(29060739-29060780)
chr7 (209-250)||(42607088-42607129)
chr7 (203-255)||(24996677-24996729)
chr7 (188-250)||(40320389-40320451)
chr7 (203-251)||(44541702-44541750)
chr7 (203-250)||(24995859-24995906)
chr7 (209-257)||(6729398-6729446)
chr7 (209-257)||(27599211-27599259)
chr7 (209-257)||(27600095-27600143)
chr7 (215-258)||(9122649-9122692)
chr7 (207-250)||(12732254-12732297)
chr7 (203-250)||(42607806-42607853)
chr7 (209-255)||(40257802-40257848)
chr7 (208-258)||(40258733-40258783)
chr7 (186-250)||(25137419-25137483)
chr7 (209-250)||(32871140-32871181)
chr7 (186-250)||(33686933-33686997)
chr7 (209-250)||(36845202-36845243)
chr7 (214-250)||(6730162-6730198)
chr7 (186-230)||(30915761-30915805)
chr7 (210-250)||(36844619-36844659)
[»] chr5 (18 HSPs)
chr5 (186-250)||(4789527-4789591)
chr5 (209-260)||(32943514-32943565)
chr5 (195-257)||(1970501-1970562)
chr5 (210-256)||(26712389-26712435)
chr5 (210-256)||(26982127-26982173)
chr5 (203-257)||(35262452-35262506)
chr5 (195-260)||(9923385-9923450)
chr5 (209-250)||(42650764-42650805)
chr5 (186-250)||(6804898-6804962)
chr5 (210-258)||(9142046-9142094)
chr5 (187-250)||(12330155-12330218)
chr5 (195-257)||(9924110-9924171)
chr5 (209-258)||(4607136-4607185)
chr5 (187-250)||(3595784-3595847)
chr5 (211-251)||(6805959-6805999)
chr5 (187-250)||(7858334-7858397)
chr5 (187-250)||(8321365-8321428)
chr5 (187-250)||(12330640-12330703)
[»] chr8 (12 HSPs)
chr8 (195-257)||(42345394-42345456)
chr8 (190-250)||(37562302-37562362)
chr8 (195-257)||(7054090-7054152)
chr8 (186-259)||(40450963-40451036)
chr8 (209-258)||(43433810-43433859)
chr8 (195-250)||(42346091-42346146)
chr8 (209-250)||(35840530-35840571)
chr8 (209-250)||(35943083-35943124)
chr8 (209-250)||(35943839-35943880)
chr8 (211-243)||(12350656-12350688)
chr8 (190-258)||(13935034-13935102)
chr8 (209-257)||(44020043-44020091)
[»] scaffold0150 (1 HSPs)
scaffold0150 (215-257)||(14012-14054)
[»] scaffold0508 (1 HSPs)
scaffold0508 (187-250)||(4140-4203)


Alignment Details
Target: chr1 (Bit Score: 157; Significance: 2e-83; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 4640774 - 4640528
Alignment:
Q  1 ctttgttttaattgtgaaattttgtcattgaaatttcaatgacagtgataaggcaatgaattttggaaaatcaannnnnnnnaggtttgaaggagatgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        ||||||||||||||||||    
T  4640774 ctttgttttaattgtgaaattttgtcattgaaatttcaatgacagtgataaggcaatggattttggaaaatcaattttttttaggtttgaaggagatgaa 4640675  T
Q  101 gaaaaagagttggagcagcagcgtttgtgggtgagtggtggtgagtgtgagaaannnnnnnggtgttgaatgtctatgataatctatttgatccaatggt 200  Q
    ||||||||||||||||| |||||||||||||||||||          |||||||       |||||||||||||||||||||||||||||||| ||||||    
T  4640674 gaaaaagagttggagcaacagcgtttgtgggtgagtg----------tgagaaaattttttggtgttgaatgtctatgataatctatttgatctaatggt 4640585  T
Q  201 tgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  4640584 tgaaaattactttcccatggtgggaaacaattcccctttaccatgctaaactccacc 4640528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 4641736 - 4641810
Alignment:
Q  183 tctatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  4641736 tctatttgatccaatggttgaaaattactttcccttggtgggaaacaattcccctttcccatgctaaactccacc 4641810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 38931381 - 38931321
Alignment:
Q  190 gatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||| ||||||| ||| | |||||||||||||||||||||||||||||||| |||||||||    
T  38931381 gatctaatggttcaaattgactttcccatggtgggaaacaattcccctttctcatgctaaa 38931321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 43316429 - 43316351
Alignment:
Q  185 tatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacctcattt 263  Q
    ||||||||| ||||| | ||| |||||||||||||||||||||||| |  || |||||||||||||| |||||| ||||    
T  43316429 tatttgatcaaatggataaaatttactttcccatggtgggaaacaactatccattcccatgctaaatgccacctgattt 43316351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 11032219 - 11032268
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    |||||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  11032219 actttcccatggtgggaaactattcccctttcccatgttaaatgccacct 11032268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 29334286 - 29334213
Alignment:
Q  185 tatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||| ||||| | ||| |||||||||||||||||||||||| |  || |||||||||||||| ||||||    
T  29334286 tatttgatctaatgggtaaaatttactttcccatggtgggaaacaactatccattcccatgctaaatgccacct 29334213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 48835097 - 48835138
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  48835097 actttcccatggtggaaaacaattcccctttcccatgctaaa 48835138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 11031479 - 11031431
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  11031479 actttcccatggtgggaaactattcccctttcccatgttaaatgccacc 11031431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 27418234 - 27418171
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||| ||||||| |||||||||||  ||||||||||||||||| ||||||||||| |||||    
T  27418234 atttgatctaatggttaaaaattactttttcatggtgggaaacaatt-ccctttcccatactaaa 27418171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 30466231 - 30466189
Alignment:
Q  208 tactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  30466231 tactttcccatggtgggaaacaactccccattcccatgctaaa 30466189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 36272541 - 36272595
Alignment:
Q  203 aaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||| ||||||||||||||||||||||| | ||| |||||||||||||| |||||    
T  36272541 aaaaatactttcccatggtgggaaacaagttcccattcccatgctaaatgccacc 36272595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 6767046 - 6766974
Alignment:
Q  185 tatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||||| ||||||| ||||  ||||| ||||| ||| ||||||||||||||| |||| ||||| ||||||    
T  6767046 tatttgatctaatggttaaaaaaaacttttccatgatggaaaacaattccccttttccatactaaactccacc 6766974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 38932109 - 38932189
Alignment:
Q  190 gatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacctcatttttaacat 270  Q
    |||| ||||||| ||||| ||||||| ||||||| |||||| | || ||||||||||||||| ||||| | | ||||||||    
T  38932109 gatctaatggttaaaaatgactttcctatggtggaaaacaacttccttttcccatgctaaatgccaccacttctttaacat 38932189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 250
Target Start/End: Original strand, 2687729 - 2687768
Alignment:
Q  211 tttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  2687729 tttcccatggtgggaaacaattatcctttcccatgctaaa 2687768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 6768112 - 6768166
Alignment:
Q  203 aaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||| |||||||||||||||||||| || | ||| |||||||||||||| |||||    
T  6768112 aaaaatactttcccatggtgggaaataagttcccattcccatgctaaatgccacc 6768166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 11426900 - 11426851
Alignment:
Q  210 ctttcccatggtgggaaacaattcccctttcccatgctaaattccacctc 259  Q
    |||||||||||||||||||  || |||||| ||||||||||| |||||||    
T  11426900 ctttcccatggtgggaaactctttcccttttccatgctaaatgccacctc 11426851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 32537716 - 32537652
Alignment:
Q  186 atttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||||||||||| |||| || |||||||||||||||||| ||||  ||||||||||| ||||    
T  32537716 atttgatccaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgttaaa 32537652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 41884229 - 41884270
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| |||||||||||||||| |||||| ||||||||||    
T  41884229 actttcctatggtgggaaacaatttcccttttccatgctaaa 41884270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 45922280 - 45922231
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||||||||||||||||   |||||||||||| |||| |||||||    
T  45922280 actttcccatggtgggaaacaacctccctttcccatgttaaactccacct 45922231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 1184977 - 1185017
Alignment:
Q  218 tggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||||  ||||||||||||||||||||| |||||||    
T  1184977 tggtgggaaaggattcccctttcccatgctaaactccacct 1185017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 148
Target Start/End: Original strand, 1623946 - 1623986
Alignment:
Q  109 gttggagcagcagc-gtttgtgggtgagtggtggtgagtgt 148  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  1623946 gttggatcagcagccgtttgtgggtgagtggtggtgagtgt 1623986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 43755919 - 43755856
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  43755919 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 43755856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 47334900 - 47334948
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||| |||||||||||||| |||| |||||||| |||||| |||||    
T  47334900 actttcctatggtgggaaacaactcccttttcccatactaaatgccacc 47334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 34035018 - 34035093
Alignment:
Q  183 tctatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||||| |||| |||||||    
T  34035018 tctatttgatccaatggtttaaaataactttcccatgatgggaaacaattctcctttcccatgttaaactccacct 34035093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 34034242 - 34034175
Alignment:
Q  183 tctatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||| ||||    
T  34034242 tctatttgatccaatggtttaaaataactttcccatggtgggaagcaattctcctttcccatgttaaa 34034175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 24126034 - 24125986
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttccca 243  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  24126034 aatggctgaaaataactttcccatggtgggaaacaactcccctttccca 24125986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 25371238 - 25371176
Alignment:
Q  188 ttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||| ||||||  |||| || |||||||||||||||||||| | | |||||||||||||||    
T  25371238 ttgatctaatggtcaaaaaatattttcccatggtgggaaacaagttcactttcccatgctaaa 25371176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 7635194 - 7635122
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaattccacctc 259  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  |||||||||||||||| | ||||||    
T  7635194 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaacttcacctc 7635122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 25067826 - 25067891
Alignment:
Q  185 tatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||||||||||   ||||  ||||||| |||||||||||||| |  ||||||||||||||||    
T  25067826 tatttgatccaatggacaaaaacaactttcctatggtgggaaacaaatatcctttcccatgctaaa 25067891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 16764973 - 16764925
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||| ||||||||||||||||| |  |||||||||||||||| ||||||    
T  16764973 acttccccatggtgggaaacaactttcctttcccatgctaaactccacc 16764925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 18290285 - 18290222
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| ||||  | ||||||||||||||    
T  18290285 tttgatctaatggttaaaaattaactttcccatggtgggaaa-aattagcttttcccatgctaaa 18290222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 18290473 - 18290536
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  18290473 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 18290536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 22499173 - 22499095
Alignment:
Q  182 atctatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacctca 260  Q
    |||||||||||||||||||| ||||| ||||||||||| ||| ||||||||| ||||||||||| |||| |||||||||    
T  22499173 atctatttgatccaatggtttaaaataactttcccatgatggaaaacaattctcctttcccatgttaaactccacctca 22499095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 22499948 - 22500015
Alignment:
Q  183 tctatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||||||| ||||| ||||||| ||||||| ||||||||| ||||||||||| ||||    
T  22499948 tctatttgatccaatggtttaaaataactttcctatggtggaaaacaattctcctttcccatgttaaa 22500015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 25970154 - 25970113
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  25970154 actttcccatggtgggaaacaactcccctttcccatgctaaa 25970113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 34154856 - 34154788
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacctcattt 263  Q
    |||||||||||| ||||||||||||||||||||||| |  | ||||||||||||||  |||||| ||||    
T  34154856 aatggttgaaaaatactttcccatggtgggaaacaagtttcttttcccatgctaaaccccacctaattt 34154788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 36450776 - 36450728
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  36450776 actttcccatggtggaaaacaactcccctttcccatgctaaataccacc 36450728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 47377584 - 47377632
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttccca 243  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  47377584 aatggctgaaaataactttcccatggtgggaaacaactcccctttccca 47377632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 232035 - 232090
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||| |||||||||||||||||||||||| | ||||||||||| |||||    
T  232035 aatggttaaaatttactttcccatggtgggaaacaacttccctttcccatactaaa 232090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 23425193 - 23425256
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||||||  |||||||||||||||||||||| || || ||||||| |||||| ||||||    
T  23425193 aatggttgaaaaaaactttcccatggtgggaaacaactctccattcccatactaaatgccacct 23425256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 244
Target Start/End: Complemental strand, 34371510 - 34371475
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccat 244  Q
    ||||||||||||||||||||||||||||||||||||    
T  34371510 actttcccatggtgggaaacaattcccctttcccat 34371475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 39429923 - 39429978
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||  |||||||||||||||||||||| || || |||||||||||||    
T  39429923 aatggttgaaaaaaactttcccatggtgggaaacaactctccattcccatgctaaa 39429978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 39652045 - 39652108
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||||||  |||||||||||||| ||||||| || || |||||||||||||| ||||||    
T  39652045 aatggttgaaaaaaactttcccatggtgagaaacaactctccattcccatgctaaatgccacct 39652108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 39429287 - 39429225
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||||||||  ||||||||||||| |||||||| || || |||||||||||||| |||||    
T  39429287 aatggttgaaaaaaactttcccatggtaggaaacaactctccattcccatgctaaatgccacc 39429225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 38009332 - 38009283
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||| ||||||||||||||||||  ||||||||||||||||| ||||||    
T  38009332 acttttccatggtgggaaacaattatcctttcccatgctaaatcccacct 38009283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 45330613 - 45330565
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||| |||||||||||||||| |||||||||||||  |||||||||||    
T  45330613 acttttccatggtgggaaacaactcccctttcccattttaaattccacc 45330565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 23383381 - 23383306
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacctcat 261  Q
    |||||||| ||||| | ||| | |||||||||||||||||||||| || |||||| ||| |||||  |||||||||    
T  23383381 atttgatcgaatggataaaattaactttcccatggtgggaaacaactctcctttctcattctaaaccccacctcat 23383306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 6246832 - 6246798
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttccca 243  Q
    |||||||||||||||||||||||| ||||||||||    
T  6246832 actttcccatggtgggaaacaatttccctttccca 6246798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 34155605 - 34155667
Alignment:
Q  188 ttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||| ||||||  |||| |||||| ||||||||| |||||| | |||||||||||||||||    
T  34155605 ttgatctaatggtcaaaaaatacttttccatggtggaaaacaagttccctttcccatgctaaa 34155667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 25970803 - 25970852
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    |||||| ||||||||||||||| |||| |||||||| |||||| ||||||    
T  25970803 actttctcatggtgggaaacaactcccttttcccatactaaatgccacct 25970852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 33369957 - 33369908
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    |||||||||||||||||||||| |  | ||||||||||||||| ||||||    
T  33369957 actttcccatggtgggaaacaaatatcatttcccatgctaaatcccacct 33369908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 33370875 - 33370916
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||||||||||||||||| |  ||||||||||||||||    
T  33370875 actttcccatggtgggaaacaagtatcctttcccatgctaaa 33370916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 39412836 - 39412772
Alignment:
Q  186 atttgatccaatggttgaaaa-ttactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||||||||||| |||| | ||||||||||| ||||||| ||||  ||||||||||||||||    
T  39412836 atttgatccaatggttaaaaactaactttcccatgatgggaaa-aattagcctttcccatgctaaa 39412772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 55514355 - 55514396
Alignment:
Q  210 ctttcccatggtgggaaacaattcccctttcccatgctaaat 251  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  55514355 ctttcccatggtgggaaacaactttcctttcccatgctaaat 55514396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 5235444 - 5235381
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  5235444 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 5235381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 20175040 - 20174977
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  20175040 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 20174977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 30808669 - 30808621
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||||||||||||||||| || ||||||||||  ||||| |||||    
T  30808669 actttcccatggtgggaaacaactctcctttcccattttaaatgccacc 30808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 47326789 - 47326837
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||||||||||||||||| |  |||||||||||||| | ||||||    
T  47326789 actttcccatggtgggaaacaactttcctttcccatgctatactccacc 47326837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 47341585 - 47341633
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||||||||||||||||| |  |||||||||||||| | ||||||    
T  47341585 actttcccatggtgggaaacaactttcctttcccatgctatactccacc 47341633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 7868117 - 7868190
Alignment:
Q  185 tatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||| | ||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  7868117 tatttgatctagtggttaaaatttactttcccatggtgggaaacaactcccctttctcatgctaaatcccacct 7868190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 36391028 - 36390964
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||    
T  36391028 atttgatctaatggttaaaatttactttcccatggtgggaaacaacttccctttcccatgctaaa 36390964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 5005532 - 5005461
Alignment:
Q  187 tttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    |||||||||||||||   | || |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  5005532 tttgatccaatggttatgatttgctttcccatgatgggaaacaattcccctttcccatgctaaatgccacct 5005461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 34617707 - 34617650
Alignment:
Q  203 aaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacctca 260  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||||||  ||||||||    
T  34617707 aaaataactttcccatggtgggaaacaattatcctttcccatgctaaaccccacctca 34617650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 20991349 - 20991286
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||||||  ||||||||||||||| |||||| || || |||||||||||||| ||||||    
T  20991349 aatggttgaaaaaaactttcccatggtggaaaacaactctccattcccatgctaaatgccacct 20991286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 36391658 - 36391713
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||| ||||||||||||||||| |||||| ||||||||||||| |||||    
T  36391658 aatggttaaaatttactttcccatggtggaaaacaactcccctttcccatactaaa 36391713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 38780038 - 38780113
Alignment:
Q  183 tctatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    |||||||||||||||  || ||||| ||||||||||| ||| || |||||| ||||||||||| |||| |||||||    
T  38780038 tctatttgatccaataatttaaaataactttcccatgatggaaagcaattctcctttcccatgttaaactccacct 38780113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 6084919 - 6084878
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  6084919 actttcccatgatgggaaacaattcccctttcccatgttaaa 6084878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 23875288 - 23875247
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  23875288 actttcccatgatgcgaaacaattcccctttcccatgctaaa 23875247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 23876064 - 23876104
Alignment:
Q  210 ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  23876064 ctttcccatggtgggaaacaactcccatttcccatgctaaa 23876104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 20992005 - 20992060
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||  ||||||||||||||| |||||| || || |||||||||||||    
T  20992005 aatggttgaaaaaaactttcccatggtggaaaacaactctccattcccatgctaaa 20992060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 15602800 - 15602861
Alignment:
Q  189 tgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||| ||||||  |||| || |||||||||||||||||||| | |||||||| ||||||||    
T  15602800 tgatctaatggtcaaaaaatattttcccatggtgggaaacaacttccctttcctatgctaaa 15602861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 6085702 - 6085742
Alignment:
Q  210 ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||||||| |||||||| || ||||||||||||||||    
T  6085702 ctttcccatggtaggaaacaactcacctttcccatgctaaa 6085742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 16903875 - 16903938
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  16903875 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 16903938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 30899460 - 30899397
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  30899460 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 30899397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 37546564 - 37546612
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||||||| |||||||||| |||||||||||||  ||||| |||||    
T  37546564 actttcccatgatgggaaacaactcccctttcccattttaaatgccacc 37546612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 45501271 - 45501335
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||||| |||||    
T  45501271 atttgatccaatggtttaaatttactttcccatggtggaaaacaactcccctttcccatactaaa 45501335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 49161808 - 49161849
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  49161808 actttcccatggtgggaaacaattcccctttcccatgctaaa 49161849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 8653697 - 8653761
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||| ||||||| ||| |||||||| |||||||||||||||| ||||||| ||||||||||    
T  8653697 atttgatcaaatggttaaaatttactttctcatggtgggaaacaatcccccttttccatgctaaa 8653761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 51421661 - 51421716
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||| |||||||||    
T  51421661 aatggttcaaattgactttcccatggtgggaaacaattcccctttctcatgctaaa 51421716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 33455781 - 33455822
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  33455781 actttcctatggtgggaaacaattcccctttcccatgctaaa 33455822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 53714416 - 53714473
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacctcattttta 266  Q
    |||||||||| |||||||| |||| ||||||||||||||||| |||||||| ||||||    
T  53714416 actttcccatagtgggaaagaatttccctttcccatgctaaactccacctccttttta 53714473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 8652881 - 8652817
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||| ||| ||||||  ||| |||||||||||||||||||| | |||||||||||||||||||||    
T  8652881 atttaatcaaatggtgaaaatttactttcccatggtgggaaccgattcccctttcccatgctaaa 8652817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 33968250 - 33968188
Alignment:
Q  188 ttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||| ||||||  |||| || |||||||||||||||||||| | |||||||||||||||||    
T  33968250 ttgatctaatggtcaaaaaatattttcccatggtgggaaacaagttccctttcccatgctaaa 33968188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 26836388 - 26836352
Alignment:
Q  215 ccatggtgggaaacaattcccctttcccatgctaaat 251  Q
    ||||| |||||||||||||||||||||||||||||||    
T  26836388 ccatgatgggaaacaattcccctttcccatgctaaat 26836352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 43768074 - 43768026
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||||||||||||||||| || || |||||||||||||| |||||    
T  43768074 actttcccatggtgggaaacaactctccattcccatgctaaatgccacc 43768026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 43768745 - 43768800
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||  ||||||||||||||| |||||| || || |||||||||||||    
T  43768745 aatggttgaaaaaaactttcccatggtggaaaacaactctccattcccatgctaaa 43768800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 44406936 - 44407007
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||| ||||| | ||| |||||||||||||||||||||||| |  |  |||||||||||||| |||||    
T  44406936 atttgatctaatgggtaaaatttactttcccatggtgggaaacaactatctattcccatgctaaatgccacc 44407007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 51420928 - 51420861
Alignment:
Q  190 gatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||| ||||||| ||||| ||||||| ||||||| |||||| | || ||||||||||||||| |||||    
T  51420928 gatctaatggttaaaaatgactttcctatggtggaaaacaacttccttttcccatgctaaatgccacc 51420861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 45297618 - 45297556
Alignment:
Q  188 ttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||| ||||||| ||||  ||||||||||| |||||||||| || |||||||||| |||||    
T  45297618 ttgatctaatggttaaaaaaaactttcccatgatgggaaacaactctcctttcccatactaaa 45297556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 52399002 - 52399076
Alignment:
Q  183 tctatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||| ||| ||||||  ||| ||||||||||||| ||||||||  || |||||| ||||||||||| |||||    
T  52399002 tctatttaatctaatggtcaaaatttactttcccatgatgggaaactctttcccttttccatgctaaatgccacc 52399076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 5113268 - 5113196
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaattccacctc 259  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  |||||||||||||||| | ||||||    
T  5113268 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaacttcacctc 5113196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 20586143 - 20586079
Alignment:
Q  186 atttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  20586143 atttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 20586079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 33454914 - 33454873
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||| |||||||||||||||||  ||||||||||||||||    
T  33454914 actttctcatggtgggaaacaattttcctttcccatgctaaa 33454873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 20586562 - 20586625
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  20586562 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 20586625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 26006216 - 26006153
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  26006216 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 26006153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 45000805 - 45000876
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  |||||||||| ||||||| |||||    
T  45000805 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccattctaaatttcacct 45000876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 49161034 - 49160994
Alignment:
Q  210 ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||| ||||||| |||||||| |||||||||||||||||||    
T  49161034 cttttccatggtaggaaacaactcccctttcccatgctaaa 49160994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 52398397 - 52398329
Alignment:
Q  183 tctatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaat 251  Q
    ||||||| ||| ||||||| ||| ||||||| ||||||||||||||  || |||||| |||| ||||||    
T  52398397 tctatttaatctaatggttaaaatttacttttccatggtgggaaactctttcccttttccattctaaat 52398329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2003 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 507 - 580
Alignment:
Q  185 tatttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||| | ||||| ||| ||||||| |||||||||||||||| |||||||||||||||| ||| ||||||    
T  507 tatttgatctagtggttaaaatttacttttccatggtgggaaacaactcccctttcccatgcttaatcccacct 580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 29060739 - 29060780
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29060739 actttcccatggtgggaaacaattcccctttcccatgctaaa 29060780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 42607129 - 42607088
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42607129 actttcccatggtgggaaacaattcccctttcccatgctaaa 42607088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 24996677 - 24996729
Alignment:
Q  203 aaaattactttcccatggtgggaaacaattcccctttcccatgctaaattcca 255  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  24996677 aaaaatactttcccatggtgggaaacaactcccctttcccatgctaaactcca 24996729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 40320389 - 40320451
Alignment:
Q  188 ttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||| ||||||||||||  ||||| |||||||||||||||| || ||||||||||||||||    
T  40320389 ttgatctaatggttgaaaaaaacttttccatggtgggaaacaactctcctttcccatgctaaa 40320451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 44541702 - 44541750
Alignment:
Q  203 aaaattactttcccatggtgggaaacaattcccctttcccatgctaaat 251  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  44541702 aaaaatactttcccatggtcggaaacaattccactttcccatgctaaat 44541750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 24995906 - 24995859
Alignment:
Q  203 aaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  24995906 aaaaatactttcccatggtgggaaacaactcccctttcccattctaaa 24995859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 6729446 - 6729398
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||||| |||| ||||||||| ||||||||||||||||| |||||    
T  6729446 actttcccatagtggaaaacaattctcctttcccatgctaaatcccacc 6729398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 27599259 - 27599211
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||||||||||||||||| |||||||||||||  ||||| |||||    
T  27599259 actttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 27600095 - 27600143
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||||||||||||||||| |||||||||||||  ||||| |||||    
T  27600095 actttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 9122692 - 9122649
Alignment:
Q  215 ccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    |||||||||||||||| | |||||||||||||||||| ||||||    
T  9122692 ccatggtgggaaacaacttccctttcccatgctaaatgccacct 9122649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 12732297 - 12732254
Alignment:
Q  207 ttactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||||||||||  || |||||||||||||||||    
T  12732297 ttactttcccatggtgggaaactctttccctttcccatgctaaa 12732254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 42607806 - 42607853
Alignment:
Q  203 aaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||| ||||||| ||| ||||||||||||||||||| ||||||||||    
T  42607806 aaaataactttcctatgatgggaaacaattccccttttccatgctaaa 42607853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 40257802 - 40257848
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattcca 255  Q
    |||||| ||||||||||||||| |||| |||||||||||||| ||||    
T  40257802 actttctcatggtgggaaacaactcccatttcccatgctaaactcca 40257848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 40258733 - 40258783
Alignment:
Q  208 tactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||||||||| |||||||||  | |||||||||||||| |||||||    
T  40258733 tactttcccatggtgagaaacaattatcatttcccatgctaaactccacct 40258783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 25137483 - 25137419
Alignment:
Q  186 atttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  25137483 atttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 25137419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 32871140 - 32871181
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| |||||||||||||| ||||| |||||||||||||    
T  32871140 actttcctatggtgggaaacaactccccattcccatgctaaa 32871181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 33686997 - 33686933
Alignment:
Q  186 atttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||| |||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  33686997 atttgatccgatggttaaaaactaactttcccatggtgggaaa-aattaacctttcccatgctaaa 33686933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 36845202 - 36845243
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||| ||||| || |||||||||||||||||||||||||||    
T  36845202 acttttccatgatgagaaacaattcccctttcccatgctaaa 36845243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 6730162 - 6730198
Alignment:
Q  214 cccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||||| | |||||||||||||||||    
T  6730162 cccatggtgggaaacaacttccctttcccatgctaaa 6730198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 30915805 - 30915761
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaa 230  Q
    |||||||| ||||| | ||| ||||||||||||||||||||||||    
T  30915805 atttgatctaatgggtaaaatttactttcccatggtgggaaacaa 30915761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 36844659 - 36844619
Alignment:
Q  210 ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||| ||||||||||||||| || ||||||||||||||||    
T  36844659 ctttctcatggtgggaaacaactcacctttcccatgctaaa 36844619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 4789591 - 4789527
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||| ||||||  | ||| |||||||||||||||||||||| |||||||||||||||||||    
T  4789591 atttgatctaatggtcaagaataactttcccatggtgggaaacaactcccctttcccatgctaaa 4789527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 32943565 - 32943514
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacctca 260  Q
    |||||||||||||||||||||| |  ||||||||||||||||| ||||||||    
T  32943565 actttcccatggtgggaaacaaatatcctttcccatgctaaatcccacctca 32943514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 1970501 - 1970562
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||||||||  |||||||||||||||||||||| || || |||||||||||||| |||||    
T  1970501 aatggttgaaaaa-actttcccatggtgggaaacaactctccattcccatgctaaatgccacc 1970562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 26712389 - 26712435
Alignment:
Q  210 ctttcccatggtgggaaacaattcccctttcccatgctaaattccac 256  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||    
T  26712389 ctttcccatggtgggaaacaacttccctttcccatgctaaactccac 26712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 26982127 - 26982173
Alignment:
Q  210 ctttcccatggtgggaaacaattcccctttcccatgctaaattccac 256  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||    
T  26982127 ctttcccatggtgggaaacaacttccctttcccatgctaaactccac 26982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 35262506 - 35262452
Alignment:
Q  203 aaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||| ||||||||||||| ||||||||||  |||||||||||||||| ||||||    
T  35262506 aaaataactttcccatggtaggaaacaattatcctttcccatgctaaactccacc 35262452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 9923450 - 9923385
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacctca 260  Q
    ||||||||||||  ||||| |||||||||||||||| || || |||||||||||||  ||||||||    
T  9923450 aatggttgaaaaaaacttttccatggtgggaaacaactctccattcccatgctaaaccccacctca 9923385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 42650805 - 42650764
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  42650805 actttcccatggtgaaaaacaattcccctttcccatgctaaa 42650764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 6804962 - 6804898
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||  |||||  |||| |||||| |||||||||||||||| ||| |||||||||||||||    
T  6804962 atttgatctgatggtcaaaaagtacttttccatggtgggaaacaactcctctttcccatgctaaa 6804898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 9142094 - 9142046
Alignment:
Q  210 ctttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    ||||||||||||||||||||| | ||||||||||| |||||| ||||||    
T  9142094 ctttcccatggtgggaaacaacttccctttcccatactaaatgccacct 9142046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 12330218 - 12330155
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| ||||  ||||||||||||||||    
T  12330218 tttgatctaatggttaaaaattaactttcccatggtgggaaa-aattagcctttcccatgctaaa 12330155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 9924110 - 9924171
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||||||||  |||||||||||||||||||||| || ||  ||||||||||||| |||||    
T  9924110 aatggttgaaaaaaactttcccatggtgggaaacaactctcc-atcccatgctaaatgccacc 9924171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 4607136 - 4607185
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    |||||| ||||||||||||||| || || |||||||||||||| ||||||    
T  4607136 actttctcatggtgggaaacaactctccattcccatgctaaatgccacct 4607185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 3595847 - 3595784
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  3595847 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 3595784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 6805959 - 6805999
Alignment:
Q  211 tttcccatggtgggaaacaattcccctttcccatgctaaat 251  Q
    ||||||||||||||||||  || ||||||||||||||||||    
T  6805959 tttcccatggtgggaaactctttccctttcccatgctaaat 6805999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 7858397 - 7858334
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  7858397 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 7858334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 8321365 - 8321428
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  8321365 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 8321428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 12330640 - 12330703
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  12330640 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 12330703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 42345456 - 42345394
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||||||||  |||||||||||||||||||||| || || |||||||||||||| |||||    
T  42345456 aatggttgaaaaaaactttcccatggtgggaaacaactctccattcccatgctaaatgccacc 42345394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 37562362 - 37562302
Alignment:
Q  190 gatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||| ||||||| ||| | ||||||| ||||||||||||||||| ||||||||||||||||    
T  37562362 gatctaatggttaaaattgactttcctatggtgggaaacaattctcctttcccatgctaaa 37562302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 7054152 - 7054090
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||||||||||  ||||| |||||||||||||||| || || |||||||||||||| |||||    
T  7054152 aatggttgaaaaaaacttttccatggtgggaaacaactctccattcccatgctaaatgccacc 7054090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 40450963 - 40451036
Alignment:
Q  186 atttgatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacctc 259  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||| |  | |||||||| |||||  |||||||    
T  40450963 atttgatctaatggttaaaatttactttcccatggtgggaaacaacttacatttcccatactaaaccccacctc 40451036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 43433859 - 43433810
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    |||||||||||||||||||  |||||||||||||||| ||||| ||||||    
T  43433859 actttcccatggtgggaaatgattcccctttcccatgttaaatgccacct 43433810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 42346091 - 42346146
Alignment:
Q  195 aatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||||||||  ||||||||||| |||||||||| || || |||||||||||||    
T  42346091 aatggttgaaaaaaactttcccatgatgggaaacaactctccattcccatgctaaa 42346146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 35840530 - 35840571
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||||||||| ||||||||||| | |||||||||||||||||    
T  35840530 actttcccatcgtgggaaacaacttccctttcccatgctaaa 35840571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 35943124 - 35943083
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    |||| ||||||||||||||||| | |||||||||||||||||    
T  35943124 acttccccatggtgggaaacaacttccctttcccatgctaaa 35943083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 35943839 - 35943880
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||| |||| |||||||||||||| ||||||||||||||||    
T  35943839 acttttccatagtgggaaacaattctcctttcccatgctaaa 35943880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 12350656 - 12350688
Alignment:
Q  211 tttcccatggtgggaaacaattcccctttccca 243  Q
    |||||||||||||||||||||| ||||||||||    
T  12350656 tttcccatggtgggaaacaatttccctttccca 12350688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 13935034 - 13935102
Alignment:
Q  190 gatccaatggttgaaaattactttcccatggtgggaaacaattcccctttcccatgctaaattccacct 258  Q
    |||| ||||||| ||| | ||||||| ||||||| |||||| |  ||||||||||||||||| ||||||    
T  13935034 gatctaatggttaaaagtgactttcctatggtggaaaacaactttcctttcccatgctaaatgccacct 13935102  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 44020091 - 44020043
Alignment:
Q  209 actttcccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    ||||| ||||| | |||||||||| |||||||||||| |||||||||||    
T  44020091 acttttccatgttaggaaacaatttccctttcccatgttaaattccacc 44020043  T

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Target: scaffold0150 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 14054 - 14012
Alignment:
Q  215 ccatggtgggaaacaattcccctttcccatgctaaattccacc 257  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  14054 ccatggtgggaaacaactcccctttcccatgctaaatcccacc 14012  T

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Target: scaffold0508 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 4203 - 4140
Alignment:
Q  187 tttgatccaatggttgaaaatta-ctttcccatggtgggaaacaattcccctttcccatgctaaa 250  Q
    ||||||| ||||||| |||| || |||||||||||||||||| ||||  ||||||||||||||||    
T  4203 tttgatctaatggttaaaaactaactttcccatggtgggaaa-aattagcctttcccatgctaaa 4140  T

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