View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19857_low_35 (Length: 301)
Name: NF19857_low_35
Description: NF19857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19857_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 14 - 285
Target Start/End: Original strand, 47124996 - 47125260
Alignment:
| Q |
14 |
caaaggtgtgagcctaaaaaagtgaactcttgttcaatgtggtcttccttaatgannnnnnnnnnnnnnnnnnnnnnnagcacatttgctttaaagatct |
113 |
Q |
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| T |
47124996 |
caaaggtgtgagcctaaaaaagtgaactcttgttcaatgtggtcttccttaatgatttattttttctttacttcttttagcacatttgctttaaagatct |
47125095 |
T |
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| Q |
114 |
ttaaagatcaatgccataatttttacctatattcattgtcatgggattttcttgtttctcaacccctcgtagggaaagttttcaagtgtaatatattcct |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47125096 |
ttaaagatcaatgccataatttttacctatattcattgtcatgggattttctcgtttctcaacccctcgtagggaaagttttcaagtgtaatatattcct |
47125195 |
T |
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| Q |
214 |
tagctaccgctaaaatatgtaagacatgcatgagaggttcaaacaacacagtgatcttcaattgaaaatgaa |
285 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
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| T |
47125196 |
tagctaccgctaaaatatgtaagacatgtatgagaggttcaa-------agtgatcttcaattgaaaatgaa |
47125260 |
T |
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