View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19857_low_37 (Length: 288)
Name: NF19857_low_37
Description: NF19857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19857_low_37 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 17924654 - 17924382
Alignment:
| Q |
1 |
attacatttggaggaaaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17924654 |
attacatttggaggaaaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaa |
17924555 |
T |
|
| Q |
101 |
ggaattattcctccaagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17924554 |
ggaattattcctccaagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatc |
17924455 |
T |
|
| Q |
201 |
ttttttctttatcaatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
17924454 |
ttttttctttatcaatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgagtat |
17924382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 221; Significance: 1e-121; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 13 - 273
Target Start/End: Original strand, 12931249 - 12931509
Alignment:
| Q |
13 |
ggaaaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcct |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
12931249 |
ggaaaacaagttgtcaggaggtattccacccttcataggcaatctcagtcaattgtattatttagaattaaatcataatatgtttcaaggaagtattcct |
12931348 |
T |
|
| Q |
113 |
ccaagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttat |
212 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12931349 |
ccaagcataggaaactgtcaaaatttacaatctcttgatctttctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttat |
12931448 |
T |
|
| Q |
213 |
caatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
12931449 |
caatcttattgaacttgtcacataactctttaagtggtagcttaccaagagaagtgggtat |
12931509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 12906154 - 12906420
Alignment:
| Q |
7 |
tttggaggaaaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaatt |
106 |
Q |
| |
|
|||||| | |||||| ||||| |||| ||||||||||||||||||||||||||||||||||| | | |||| |||||||||||||||||||||||||||| |
|
|
| T |
12906154 |
tttggatggaaacaaattgtctggaggtattccacccttcataggcaatctcagtcaattgtttaaattagtattagatcataatatgtttcaaggaatt |
12906253 |
T |
|
| Q |
107 |
attcctccaagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatctttttt |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
12906254 |
attcctccaagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatctgtttt |
12906353 |
T |
|
| Q |
207 |
ctttatcaatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
12906354 |
ctttatcaatcttattgaacttgtcacataactctttgagcggtactttaccaagagaagtgggtat |
12906420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 273
Target Start/End: Original strand, 12947614 - 12947874
Alignment:
| Q |
13 |
ggaaaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcct |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
12947614 |
ggaaaacaagttgtcaggaggtattccacccttcataggcaatctcagtcaattgtttgatttagaattaaatcataatatgtttcaaggaagtattcct |
12947713 |
T |
|
| Q |
113 |
ccaagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttat |
212 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| |
|
|
| T |
12947714 |
ccaagcataggaaactgtcaaaatttacaatctctttatctttctcataataagcttagaggaaccatacctgttgaagttttaaatattttttctttat |
12947813 |
T |
|
| Q |
213 |
caatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12947814 |
caaagatattgaacttgtcacataactctttgagtggtagcttaccaagagaagtgggtat |
12947874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 12898542 - 12898800
Alignment:
| Q |
15 |
aaaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcctcc |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | ||| ||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
12898542 |
aaaacaagttgtcaggagatattccacccttcataggcaatctcagtcagttgtttaaattacaattaaatcataatatgtttcaaggaagtattcctcc |
12898641 |
T |
|
| Q |
115 |
aagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttatca |
214 |
Q |
| |
|
|||| | |||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12898642 |
aagcattggaaactgtctacatttacaatatctagatctttctcataataagcttagaggaaccatacctgcagaggttttaaatcttttttctttatca |
12898741 |
T |
|
| Q |
215 |
atcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
12898742 |
atgttattgaacttgtcacataactctttgagcggtactttaccaagagaagtgggtat |
12898800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 12957053 - 12957308
Alignment:
| Q |
15 |
aaaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcctcc |
114 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||||| | | ||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
12957053 |
aaaacaagttgtcaggagatattccaccgttcatagggaatctcagtcaattgtttaaattagaattagatcataacatgtttcaaggaagtattcctcc |
12957152 |
T |
|
| Q |
115 |
aagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttatca |
214 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
12957153 |
aagcataggaaactgtcaaaatttacaatatctaaatctttatcataataagcttagaggaaccatacctgtagaggttttaaatattttttcattat-- |
12957250 |
T |
|
| Q |
215 |
atcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
| |||| || ||||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
12957251 |
-tagtattagacctgtcacataactctttgagcggtaccttaccaacagaagtgggtat |
12957308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 162; Significance: 2e-86; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 10718134 - 10717877
Alignment:
| Q |
16 |
aaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcctcca |
115 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||||||| |||||| | ||||||||||||||| | |||||||||| |
|
|
| T |
10718134 |
aaacaagttgtcaggagatatgccaccctttataggaaatctcagtcaattgtttgatttacgattagaacttaatatgtttcaagggaatattcctcca |
10718035 |
T |
|
| Q |
116 |
agcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttatcaa |
215 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
10718034 |
agtataggaaactgtcaaaatttacaatatctagatctttctcataataggtttagtggaaccatacctgtagaggtttttaatcttttttatttatcaa |
10717935 |
T |
|
| Q |
216 |
tcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
10717934 |
aaatattggacttgtcacataactctttgagtggtagcttaccaagagaagtgagtat |
10717877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 16 - 271
Target Start/End: Complemental strand, 10748251 - 10747996
Alignment:
| Q |
16 |
aaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcctcca |
115 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||||||||||||| | | || || ||| ||| ||||||||| ||||||| |||||||||| |
|
|
| T |
10748251 |
aaacaagttgtcaggatatataccacccttcataggcaatctcagtcaattgtttaaattggatttatatcgtaatatgttccaaggaaatattcctcca |
10748152 |
T |
|
| Q |
116 |
agcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttatcaa |
215 |
Q |
| |
|
||| ||| ||| |||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||| |||| |||| || ||||||||||||||| |
|
|
| T |
10748151 |
agcatagaaaattgtcaaaagttacaatacctagatctttctcataataagcttagtggaaccataccttcagagatttttcatattttttctttatcaa |
10748052 |
T |
|
| Q |
216 |
tcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggt |
271 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
10748051 |
acttattgaacttatcacataactttttgagtggtagcttaccaagagaagtgggt |
10747996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 16 - 271
Target Start/End: Original strand, 10564000 - 10564255
Alignment:
| Q |
16 |
aaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcctcca |
115 |
Q |
| |
|
||||||||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||| |
|
|
| T |
10564000 |
aaacaagttgtcaggtgatatgccaccttttataggtaatctcagtcagttgtatgatttagaattagctcataatatgtttgaaggaaatattcctcct |
10564099 |
T |
|
| Q |
116 |
agcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttatcaa |
215 |
Q |
| |
|
||| ||||||| ||||||||||||||| |||||||| ||| ||||||| ||| ||| |||||||| |||||||||| | ||||| ||||||| ||| |
|
|
| T |
10564100 |
agcataggaaattgtcaaaatttacaagtactagatctttcttataataaatttaatggatccatacctctagaggtttttagtctttcttctttaacaa |
10564199 |
T |
|
| Q |
216 |
tcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggt |
271 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
10564200 |
acttattgaacttgtcacataactctttgagtggtagcttaccaagagaactgggt |
10564255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 273
Target Start/End: Original strand, 10610681 - 10610940
Alignment:
| Q |
14 |
gaaaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcctc |
113 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||| | || | || | ||| ||||||||||||| |||||||| |
|
|
| T |
10610681 |
gaaaacaagttgtcaggatatataccacccttcataggcaatctcagtcaattgtttaggttggctgtacacagtaacatgtttcaaggaaatattcctc |
10610780 |
T |
|
| Q |
114 |
caagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttatc |
213 |
Q |
| |
|
||||| ||||||| |||||||| |||||||| |||||||| ||||||||||| ||||| ||| |||||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
10610781 |
caagcataggaaattgtcaaaagttacaatacctagatctttctcataataaacttagtggatccatacctttagagatttttaatcttttttatttatc |
10610880 |
T |
|
| Q |
214 |
aatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
|| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10610881 |
aaatttattgaacttgtcgcataactctttgagtggtagcttaccaagagaagtgggtat |
10610940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 10741935 - 10741678
Alignment:
| Q |
16 |
aaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcctcca |
115 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| || ||||||||||||||| | ||||||||| |
|
|
| T |
10741935 |
aaacaagttgtcaggagatataccaccctttataggaaatcttagtcaattgtttgatttggaattaaattttaatatgtttcaagggaatattcctcct |
10741836 |
T |
|
| Q |
116 |
agcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttatcaa |
215 |
Q |
| |
|
| | ||||||| ||||||||||||||| |||||||| ||| ||||||| ||| ||| |||||||| |||||||||| | ||||| ||||||||||| |
|
|
| T |
10741835 |
accataggaaattgtcaaaatttacaagtactagatctttcttataataaatttaatggatccatacctctagaggtttttagtctttcttctttatcaa |
10741736 |
T |
|
| Q |
216 |
tcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||| |
|
|
| T |
10741735 |
acttattggacttgtcacataacactttgagtggtagcataccaagagaagtgggtat |
10741678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 273
Target Start/End: Complemental strand, 10764369 - 10764112
Alignment:
| Q |
15 |
aaaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcctcc |
114 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||||||||||||||||| | || | ||| | |||||||||||| |||| ||||||||| |
|
|
| T |
10764369 |
aaaacaagttgtcaggatatataccacccttcataggcaatctcagtcaattgtttacattggctttaactggtaatatgtttcacggaaatattcctcc |
10764270 |
T |
|
| Q |
115 |
aagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaat-cttttttctttatc |
213 |
Q |
| |
|
||| |||||||||||||||| ||||||||||| ||||| ||| |||| |||||||| ||||||||||||||||||||||| || |||||| |||||| |
|
|
| T |
10764269 |
tagcataggaaactgtcaaaagttacaatatctcgatctttctgataacaagcttagcggaaccatacctgtagaggtttttcatatttttttatttatc |
10764170 |
T |
|
| Q |
214 |
aatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
||| ||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |
|
|
| T |
10764169 |
aattgtattgaacttgtcacataaaac--tgagtggtagcttaccaagagaagtgggtat |
10764112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 10217982 - 10217731
Alignment:
| Q |
16 |
aaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcctcca |
115 |
Q |
| |
|
||||||||||| ||||||||| |||| ||| ||||||||| |||| ||||||||| | || ||| |||||||||||||| |||||| |||||||||| |
|
|
| T |
10217982 |
aaacaagttgttaggagatataccacactttataggcaatttcagccaattgtattggctggatttacatcataatatgtttgaaggaagtattcctcca |
10217883 |
T |
|
| Q |
116 |
agcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttatcaa |
215 |
Q |
| |
|
||| |||||||||| ||| || ||||||||||| |||| |||| |||||||||||||||| |||||| ||||| |||| ||||||||||| ||||||| |
|
|
| T |
10217882 |
agcataggaaactgccaacatctacaatatctaaatctagctcaaaataagcttagaggaatcatacccttagagatttttaatcttttttccttatcaa |
10217783 |
T |
|
| Q |
216 |
tcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagt |
267 |
Q |
| |
|
| |||||| | ||||||||||| | |||||| |||| ||| ||||||||||| |
|
|
| T |
10217782 |
ttttattggagttgtcacataattttttgagcggtagcttgccaagagaagt |
10217731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 7191969 - 7192235
Alignment:
| Q |
7 |
tttggaggaaaacaagttgtcaggagatattccacccttcataggcaatctcagtcaattgtatgatttagaat-tagatcataatatgtttcaaggaat |
105 |
Q |
| |
|
|||| ||| ||| ||||| || ||||| || |||||| |||||||||| ||||||||||| ||| |||| || | ||| |||||||||| |||||| |
|
|
| T |
7191969 |
tttgcagggaaataagttttccggagagataccacccatcataggcaacctcagtcaattatatcattt-gagtgtaggagataatatgttagaaggaaa |
7192067 |
T |
|
| Q |
106 |
tattcctccaagcttaggaaactgtcaaaatttacaatatctagatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttt |
205 |
Q |
| |
|
|||||| |||| |||||||||| |||| |||||||| || || || | || || || ||||||||||||||||| |||| ||||| | ||||| | |
|
|
| T |
7192068 |
tattccgtcaagtataggaaactgcaaaaagttacaatacctggaccttgcacaaaacaatcttagaggaaccatacccttagaagttttcagtctttct |
7192167 |
T |
|
| Q |
206 |
tctttatcaatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtgggtat |
273 |
Q |
| |
|
|| ||||||| |||| ||||||||||| ||||| |||||||||| | ||||||||||||||||||| |
|
|
| T |
7192168 |
tcgttatcaaacttactgaacttgtcaagaaactcattgagtggtagcctaccaagagaagtgggtat |
7192235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 267
Target Start/End: Complemental strand, 19607069 - 19606850
Alignment:
| Q |
48 |
taggcaatctcagtcaattgtatgatttagaattagatcataatatgtttcaaggaattattcctccaagcttaggaaactgtcaaaatttacaatatct |
147 |
Q |
| |
|
||||||| ||||||||||||||| | ||| |||| | | |||||| | ||||||| ||||||| ||||| |||||||||||||||| ||||||| | |
|
|
| T |
19607069 |
taggcaacctcagtcaattgtattacctaggtttaggtgaaaatatgctacaaggaaatattccttcaagcataggaaactgtcaaaagttacaatccat |
19606970 |
T |
|
| Q |
148 |
agatctgtctcataataagcttagaggaaccatacctgtagaggttttaaatcttttttctttatcaatcttattgaacttgtcacataactctttgagt |
247 |
Q |
| |
|
|| || | ||| ||||| ||||| ||||||||||| |||||||||| ||||| ||||||||||| ||| || | |||||| | ||||| || ||| |
|
|
| T |
19606969 |
agtcctttttcaaaataatcttagtggaaccatacccttagaggtttttcgtctttcctctttatcaatattactggatttgtcaaaaaactcattcagt |
19606870 |
T |
|
| Q |
248 |
ggtaccttaccaagagaagt |
267 |
Q |
| |
|
|| | |||||| | |||||| |
|
|
| T |
19606869 |
ggcaacttaccgaaagaagt |
19606850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 273
Target Start/End: Complemental strand, 10653280 - 10653178
Alignment:
| Q |
171 |
gaggaaccatacctgtagaggttttaaatcttttttctttatcaatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaagtggg |
270 |
Q |
| |
|
||||||||||||| |||||||||||| ||||| || || ||| | || |||| |||||| ||||| | |||||||||| |||||| ||||||||||| |
|
|
| T |
10653280 |
gaggaaccatacccatagaggttttaagtctttcctccctaacaaacatactgaatttgtcaaataacacattgagtggtagcttaccgagagaagtggg |
10653181 |
T |
|
| Q |
271 |
tat |
273 |
Q |
| |
|
||| |
|
|
| T |
10653180 |
tat |
10653178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 272
Target Start/End: Complemental strand, 10661170 - 10661065
Alignment:
| Q |
167 |
cttagaggaaccatacctgtagaggttttaaatcttttttctttatcaatcttattgaacttgtcacataactctttgagtggtaccttaccaagagaag |
266 |
Q |
| |
|
||||||||||||||||| | |||| || | ||||| |||||| ||| |||| ||||||||||| | ||||| |||||||||| | |||||| ||||| |
|
|
| T |
10661170 |
cttagaggaaccatacccaaaaaggtctttagtctttcctctttaacaaacttactgaacttgtcaaaaaactcattgagtggtagcctaccaatagaag |
10661071 |
T |
|
| Q |
267 |
tgggta |
272 |
Q |
| |
|
|||||| |
|
|
| T |
10661070 |
tgggta |
10661065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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