View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19857_low_4 (Length: 814)

Name: NF19857_low_4
Description: NF19857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19857_low_4
NF19857_low_4
[»] chr3 (36 HSPs)
chr3 (13-799)||(42880997-42881804)
chr3 (320-469)||(2150628-2150777)
chr3 (375-499)||(19873073-19873196)
chr3 (375-531)||(48080010-48080165)
chr3 (367-482)||(50508868-50508983)
chr3 (225-316)||(30762032-30762123)
chr3 (389-460)||(51055477-51055548)
chr3 (375-431)||(11671784-11671840)
chr3 (317-482)||(35688298-35688465)
chr3 (373-499)||(25467466-25467595)
chr3 (335-460)||(48583747-48583873)
chr3 (375-451)||(5041058-5041134)
chr3 (375-427)||(33558794-33558846)
chr3 (415-503)||(49374769-49374856)
chr3 (669-742)||(42880743-42880815)
chr3 (335-476)||(54444359-54444501)
chr3 (375-427)||(35203302-35203354)
chr3 (375-482)||(42096746-42096854)
chr3 (378-453)||(7940356-7940431)
chr3 (375-482)||(12905611-12905718)
chr3 (335-459)||(8340160-8340286)
chr3 (375-429)||(40563992-40564046)
chr3 (317-499)||(19454765-19454949)
chr3 (375-499)||(45079209-45079333)
chr3 (375-431)||(26787602-26787657)
chr3 (335-427)||(14418284-14418376)
chr3 (366-433)||(22845125-22845191)
chr3 (375-442)||(24987411-24987478)
chr3 (415-482)||(30964594-30964661)
chr3 (415-482)||(30980406-30980473)
chr3 (375-426)||(33099698-33099749)
chr3 (375-460)||(6408592-6408678)
chr3 (375-453)||(19618710-19618788)
chr3 (375-409)||(23298332-23298366)
chr3 (375-460)||(27064210-27064296)
chr3 (376-421)||(25630323-25630368)
[»] chr5 (24 HSPs)
chr5 (375-499)||(41983233-41983356)
chr5 (373-482)||(22632242-22632351)
chr5 (373-499)||(7978016-7978141)
chr5 (375-504)||(16620312-16620441)
chr5 (375-499)||(29455776-29455899)
chr5 (335-431)||(24489032-24489128)
chr5 (319-504)||(16186748-16186933)
chr5 (375-427)||(6224845-6224897)
chr5 (367-431)||(18595413-18595477)
chr5 (313-429)||(23141560-23141677)
chr5 (375-431)||(31149694-31149750)
chr5 (335-482)||(4901901-4902047)
chr5 (317-499)||(639302-639484)
chr5 (373-431)||(14087715-14087773)
chr5 (375-460)||(4572291-4572376)
chr5 (366-482)||(36470441-36470557)
chr5 (375-453)||(14088298-14088376)
chr5 (375-460)||(34718782-34718868)
chr5 (375-460)||(41692466-41692552)
chr5 (317-482)||(19254428-19254594)
chr5 (317-485)||(38309774-38309943)
chr5 (339-460)||(15673941-15674064)
chr5 (415-482)||(32302390-32302457)
chr5 (317-429)||(36323077-36323188)
[»] chr7 (28 HSPs)
chr7 (317-526)||(2959899-2960108)
chr7 (375-531)||(43702414-43702569)
chr7 (317-499)||(44300704-44300886)
chr7 (373-482)||(43224325-43224434)
chr7 (375-524)||(5924068-5924218)
chr7 (373-482)||(36074121-36074231)
chr7 (333-503)||(38469876-38470046)
chr7 (375-427)||(9477708-9477760)
chr7 (376-460)||(30738635-30738719)
chr7 (378-453)||(3551536-3551611)
chr7 (317-460)||(28067212-28067356)
chr7 (318-460)||(30391577-30391720)
chr7 (317-482)||(1875982-1876150)
chr7 (375-460)||(19805067-19805152)
chr7 (375-468)||(38398432-38398525)
chr7 (375-431)||(16278487-16278543)
chr7 (318-482)||(40789473-40789638)
chr7 (375-431)||(42284563-42284619)
chr7 (375-442)||(38400974-38401041)
chr7 (335-460)||(45112223-45112350)
chr7 (375-460)||(17172218-17172304)
chr7 (317-499)||(40342257-40342439)
chr7 (335-499)||(48558643-48558807)
chr7 (339-499)||(36072596-36072757)
chr7 (375-421)||(43218675-43218721)
chr7 (222-311)||(18319880-18319969)
chr7 (375-427)||(21153261-21153314)
chr7 (375-448)||(25309513-25309586)
[»] chr1 (36 HSPs)
chr1 (318-460)||(610732-610874)
chr1 (375-503)||(945460-945587)
chr1 (335-460)||(29512173-29512298)
chr1 (375-485)||(32835511-32835621)
chr1 (375-499)||(19996676-19996799)
chr1 (375-485)||(31873302-31873412)
chr1 (318-499)||(7842550-7842730)
chr1 (375-503)||(25059081-25059208)
chr1 (375-482)||(973509-973616)
chr1 (375-482)||(10786217-10786324)
chr1 (317-460)||(20414990-20415134)
chr1 (376-499)||(28220952-28221074)
chr1 (336-485)||(48985127-48985278)
chr1 (334-503)||(9472928-9473098)
chr1 (333-460)||(31107606-31107734)
chr1 (375-499)||(19506367-19506490)
chr1 (375-427)||(38491461-38491513)
chr1 (375-442)||(424611-424678)
chr1 (375-430)||(2975245-2975300)
chr1 (375-430)||(2978471-2978526)
chr1 (335-482)||(2465514-2465661)
chr1 (375-430)||(34321000-34321057)
chr1 (335-519)||(35949559-35949744)
chr1 (375-460)||(44327930-44328015)
chr1 (313-460)||(48662679-48662828)
chr1 (375-482)||(30489666-30489774)
chr1 (338-499)||(31646262-31646422)
chr1 (375-460)||(4893292-4893378)
chr1 (375-460)||(29185109-29185195)
chr1 (335-401)||(13797032-13797098)
chr1 (375-482)||(35659548-35659656)
chr1 (375-433)||(3821275-3821334)
chr1 (394-533)||(29426333-29426471)
chr1 (375-461)||(50099834-50099921)
chr1 (373-427)||(21260746-21260800)
chr1 (375-460)||(29054605-29054691)
[»] chr4 (31 HSPs)
chr4 (334-504)||(8614535-8614704)
chr4 (375-503)||(1731044-1731171)
chr4 (375-504)||(14595289-14595418)
chr4 (317-531)||(22829700-22829914)
chr4 (373-482)||(22313346-22313455)
chr4 (375-499)||(34459624-34459747)
chr4 (317-453)||(51806865-51807002)
chr4 (373-482)||(33983147-33983256)
chr4 (333-422)||(7117885-7117973)
chr4 (319-499)||(29405809-29405989)
chr4 (381-482)||(33733387-33733489)
chr4 (375-460)||(3387209-3387294)
chr4 (375-459)||(2224950-2225034)
chr4 (373-431)||(25938426-25938484)
chr4 (375-429)||(28928616-28928670)
chr4 (412-482)||(29994330-29994400)
chr4 (338-482)||(31713589-31713735)
chr4 (375-460)||(52802257-52802343)
chr4 (375-460)||(53140643-53140729)
chr4 (375-485)||(39485126-39485238)
chr4 (375-501)||(56445154-56445281)
chr4 (317-531)||(22247822-22248037)
chr4 (375-474)||(41003338-41003440)
chr4 (336-431)||(50981907-50982004)
chr4 (380-427)||(7250519-7250566)
chr4 (373-427)||(21297276-21297331)
chr4 (375-433)||(21245899-21245956)
chr4 (412-482)||(31786424-31786494)
chr4 (375-453)||(42755380-42755458)
chr4 (394-499)||(11034690-11034794)
chr4 (375-460)||(52595577-52595662)
[»] chr2 (17 HSPs)
chr2 (375-503)||(667971-668098)
chr2 (335-431)||(29155364-29155460)
chr2 (375-431)||(4592194-4592250)
chr2 (337-485)||(16711305-16711453)
chr2 (375-482)||(20937043-20937149)
chr2 (317-456)||(39767073-39767212)
chr2 (375-453)||(31440636-31440714)
chr2 (313-430)||(12757815-12757932)
chr2 (375-442)||(13142572-13142639)
chr2 (373-532)||(30241377-30241535)
chr2 (317-499)||(2656779-2656961)
chr2 (375-460)||(4289659-4289745)
chr2 (335-481)||(8753843-8753989)
chr2 (394-460)||(29546115-29546181)
chr2 (374-443)||(40507630-40507700)
chr2 (367-400)||(15150219-15150252)
chr2 (394-499)||(41935544-41935648)
[»] chr8 (23 HSPs)
chr8 (317-499)||(20216192-20216374)
chr8 (317-499)||(20235790-20235972)
chr8 (375-460)||(6109645-6109730)
chr8 (375-460)||(2620961-2621046)
chr8 (375-474)||(25500155-25500254)
chr8 (317-499)||(859487-859669)
chr8 (317-499)||(221968-222151)
chr8 (317-499)||(691123-691306)
chr8 (317-499)||(735591-735774)
chr8 (375-431)||(19643514-19643570)
chr8 (375-431)||(24891418-24891474)
chr8 (313-430)||(43239235-43239352)
chr8 (318-431)||(26561173-26561284)
chr8 (335-431)||(43511244-43511340)
chr8 (336-482)||(7580058-7580203)
chr8 (375-460)||(2472281-2472366)
chr8 (375-467)||(15961671-15961764)
chr8 (375-519)||(15542100-15542244)
chr8 (335-482)||(38020049-38020198)
chr8 (375-431)||(25419319-25419375)
chr8 (375-482)||(37226772-37226880)
chr8 (375-450)||(45553100-45553175)
chr8 (378-460)||(30801271-30801352)
[»] scaffold0011 (1 HSPs)
scaffold0011 (334-485)||(250156-250309)
[»] scaffold0323 (1 HSPs)
scaffold0323 (225-316)||(10987-11078)
[»] chr6 (8 HSPs)
chr6 (367-430)||(12429483-12429546)
chr6 (375-576)||(6937958-6938156)
chr6 (375-460)||(24447119-24447205)
chr6 (366-482)||(28769886-28770002)
chr6 (375-460)||(1221708-1221794)
chr6 (335-499)||(6337889-6338054)
chr6 (375-460)||(20691583-20691669)
chr6 (375-460)||(31070826-31070910)
[»] scaffold0005 (1 HSPs)
scaffold0005 (375-504)||(221960-222089)
[»] scaffold0312 (1 HSPs)
scaffold0312 (375-442)||(5871-5938)
[»] scaffold0249 (1 HSPs)
scaffold0249 (335-482)||(20034-20182)
[»] scaffold0056 (1 HSPs)
scaffold0056 (373-428)||(72592-72646)
[»] scaffold0242 (2 HSPs)
scaffold0242 (317-427)||(13026-13137)
scaffold0242 (317-427)||(21861-21972)


Alignment Details
Target: chr3 (Bit Score: 547; Significance: 0; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 547; E-Value: 0
Query Start/End: Original strand, 13 - 799
Target Start/End: Complemental strand, 42881804 - 42880997
Alignment:
Q  13 aaaatccccaccagtagcagctgaacagaacagcaactctgctatcatgacagcagccactacccaaagcgcctagcagcaaacagacctgcaagacaca 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42881804 aaaatccccaccagtagcagctgaacagaacagcaactctgctatcatgacagcagccactacccaaagcgcctagcagcaaacagacctgcaagacaca 42881705  T
Q  113 acagcagcaacagcaagaacccaggaaaggctcatacgctgacaaaacaccacagcaccactgca-cagctgcaaaaacacccctaaagcacactgttca 211  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  42881704 acagcagcaacagcaaaaacccagaaaaggctcacacgctgacaaaacaccacagcaccaatgcagcagctgcaaaaacacccctaaagcacactgttca 42881605  T
Q  212 gccgcaaatcacaccaaggcaccactttggattccacctccactcgtagaacaaacaaggttgaattttcagcctagctaaactccaactccacgacaac 311  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42881604 gccgcaaatcacaccaaggcaccacttcggattccacctccactcgtagaacaaacaaggtagaattttcagcctagctaaactccaactccacgacaac 42881505  T
Q  312 cttttgctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttac 411  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||        ||||| | |||||||||||||||||||||||||||||||||||||    
T  42881504 cttttgctaaatactacgatgtgtactattttatgagttgatttgaattttttt-gaccatagttttatttcaattgtgatgtttttattgtccttttac 42881406  T
Q  412 agttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgaggatacaattattt 511  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  42881405 agttaaagtacgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaagtttgttgcccacgaggatacaattattt 42881306  T
Q  512 tttacaaatgcgggtgtgggatagggcggtgtataccctgcccatagagttaccattgccatccccatcgatcacatttccnnnnnnnnnnnnnnnnnga 611  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||    
T  42881305 tttacaaatacgggtgtgggatagggcggtgtataccctgcccatagagttaccattgccatccccatcgatcacatttccttttattttatttttttga 42881206  T
Q  612 caaggg-nnnnnnnttccattttaaggnnnnnnnntcccatcgatcacatttcttgattctgaaaaccagacatgaaatttccttgcatttgcctaagtt 710  Q
    ||||||        |||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42881205 caagggaaaaaaaattccattttaaggaaaaaaaatcccatcgatcacatttcttgattctgaaaaccagacatgaaatttccttgcatttgcctaagtt 42881106  T
Q  711 gtccatggatagaagaaaagttccaataccaa--------------------tagccatgcttttgcataatacaacactatcttgtttgtgcatcatag 790  Q
    ||||||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42881105 gtccatggatagaagaaaagttccaataccaaaagatctacattaacaaatgtagccatgcttttgcataatacaacactatcttgtttgtgcatcatag 42881006  T
Q  791 actaataaa 799  Q
    ||| |||||    
T  42881005 actgataaa 42880997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 320 - 469
Target Start/End: Original strand, 2150628 - 2150777
Alignment:
Q  320 aaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaag 419  Q
    |||||| |||||  |||||||||||||||||||||||||        ||||| | |||||||||||||||||||||||||||||| ||| | | ||||||    
T  2150628 aaatactacgattcgtactattttatgagttgatttgaaaatatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaag 2150727  T
Q  420 tgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatggg 469  Q
    |||| ||||||| | | | ||||  | |||||||||||||||| ||||||    
T  2150728 tgcgagtaatgggtacggctatgggcccttaggtgcccataaagtatggg 2150777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 19873196 - 19873073
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||| | | ||||||  ||||||||| |||||||| |||||| | ||    
T  19873196 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcaggtaatgggtgcgggtatgggcacttaggtacccataaagtatggggaggg 19873097  T
Q  475 acactaaaatttgttgcacacgagg 499  Q
     |||| ||| ||||||| |||||||    
T  19873096 gcact-aaagttgttgcccacgagg 19873073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 375 - 531
Target Start/End: Complemental strand, 48080165 - 48080010
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||  | | ||||||  ||||||||| ||||||  ||||||| ||||    
T  48080165 ttttatttcaattgtgatatttttattgtcttttcatagttaaagtgcgggtaatgagtgcgggtatggacacttaggtacccataggatatggggaagg 48080066  T
Q  475 acactaaaatttgttgcacacgaggatacaattattttttacaaatgcgggtgtggg 531  Q
     |||| ||| ||||||| ||||||| |||   || |||||||||||| |||| ||||    
T  48080065 gcact-aaagttgttgcccacgagggtacggataatttttacaaatgtgggtatggg 48080010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 367 - 482
Target Start/End: Original strand, 50508868 - 50508983
Alignment:
Q  367 gaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatat 466  Q
    ||||| |||||||||||||||||||||||||||||||| ||| | |||||||||||||||| ||| | ||||||||  |||||| || ||||||   |||    
T  50508868 gaccataattttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtagtgggtgcaggtatgggcacttaagttcccatagggtat 50508967  T
Q  467 gggaaaggacactaaa 482  Q
    | |||||| |||||||    
T  50508968 gagaaagggcactaaa 50508983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 225 - 316
Target Start/End: Original strand, 30762032 - 30762123
Alignment:
Q  225 ccaaggcaccactttggattccacctccactcgtagaacaaacaaggttgaattttcagcctagctaaactccaactccacgacaacctttt 316  Q
    ||||||||||||||  |||||||||  || || ||||||||||| ||||||||||||||||| | |||||||||| ||||||| ||||||||    
T  30762032 ccaaggcaccacttcagattccaccgtcattcatagaacaaacacggttgaattttcagcctcgataaactccaaatccacgataacctttt 30762123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 389 - 460
Target Start/End: Complemental strand, 51055548 - 51055477
Alignment:
Q  389 tgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||  ||||||||||| ||||    
T  51055548 tgatgtttttattgtccttttatagttaaagtgcggataatggatgcaggtatgtgcacttaggtgctcata 51055477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 375 - 431
Target Start/End: Complemental strand, 11671840 - 11671784
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  11671840 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtaatgg 11671784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 482
Target Start/End: Complemental strand, 35688465 - 35688298
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtga--tgtttttattgtccttttacagt 414  Q
    ||||||||| |||||   || |||||||||||||||||||||       ||| || | ||||||||||||||||   | ||||||||||| ||| | |||    
T  35688465 gctaaatactacgattcatattattttatgagttgatttgaaattttttggatcatagttttatttcaattgtgggttttttttattgtcttttcatagt 35688366  T
Q  415 taaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    |||| |||||||||||| | | ||||||  ||||||||||||||||  ||||||| |||| |||||||    
T  35688365 taaaatgcgggtaatgggtgcgggtatgggcacttaggtgcccataggatatggggaagggcactaaa 35688298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 499
Target Start/End: Complemental strand, 25467595 - 25467466
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagtta----aagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgg 468  Q
    |||||||||||||||||||||||||||||||  ||| | |||||    || |||||||||||| | | ||||||| ||||||| | ||||||| ||||||    
T  25467595 aattttatttcaattgtgatgtttttattgttttttcatagttagttaaattgcgggtaatgggtgcgggtatgagcacttagatacccataagatatgg 25467496  T
Q  469 gaaaggacactaaaatttgttgcacacgagg 499  Q
    | |||| |||| ||| ||||||| |||||||    
T  25467495 ggaagggcact-aaagttgttgcccacgagg 25467466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 460
Target Start/End: Complemental strand, 48583873 - 48583747
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagttaaagtgcgggtaatggat 433  Q
    ||||||||||| ||||||||||||       ||| || |||||||||||||||||| ||||||| |||||| ||| |  ||||||||||||||||||  |    
T  48583873 tactattttattagttgatttgaaattttgaggatcataattttatttcaattgtggtgttttttattgtcttttcatggttaaagtgcgggtaatgact 48583774  T
Q  434 tcaggtatgaccacttaggtgcccata 460  Q
     ||||||||  |||||| |||||||||    
T  48583773 gcaggtatgtgcacttaagtgcccata 48583747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 451
Target Start/End: Original strand, 5041058 - 5041134
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttag 451  Q
    ||||||||||||||||||||||||||| || ||| | ||||||||||||| |||||| | ||||||||  |||||||    
T  5041058 ttttatttcaattgtgatgtttttattatcttttcatagttaaagtgcggataatgggtgcaggtatgggcacttag 5041134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 427
Target Start/End: Original strand, 33558794 - 33558846
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggta 427  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  33558794 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggta 33558846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 415 - 503
Target Start/End: Complemental strand, 49374856 - 49374769
Alignment:
Q  415 taaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgaggatac 503  Q
    ||||||||||||||||| | | ||||||| |||||| |||||||||   |||||||||||||||||||| ||||||  |||||||||||    
T  49374856 taaagtgcgggtaatgggtgcgggtatgagcacttaagtgcccatagggtatgggaaaggacactaaaa-ttgttgtccacgaggatac 49374769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 669 - 742
Target Start/End: Complemental strand, 42880815 - 42880743
Alignment:
Q  669 tctgaaaaccagacatgaaatttccttgcatttgcctaagttgtccatggatagaagaaaagttccaataccaa 742  Q
    ||||||||| || ||||||| |||||||| |||||||  ||||||||||||||||| |||| ||||||||||||    
T  42880815 tctgaaaactaggcatgaaacttccttgcctttgcctccgttgtccatggatagaa-aaaaattccaataccaa 42880743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 335 - 476
Target Start/End: Original strand, 54444359 - 54444501
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgat-gtttttattgtccttttacagttaaagtgcgggtaatggat 433  Q
    ||||||||||||||||||||||||       |||||| | |||||||||||| || ||  ||||||||||| ||| | ||||||||||| |||||||| |    
T  54444359 tactattttatgagttgatttgaaaattcttggaccatagttttatttcaatcgtaatattttttattgtcttttcatagttaaagtgctggtaatgggt 54444458  T
Q  434 tcaggtatgaccacttaggtgcccataaaatatgggaaaggac 476  Q
       | ||||| ||||||| ||| |||| ||||||| |||||||    
T  54444459 gtggatatgaacacttagatgctcatagaatatggaaaaggac 54444501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 35203354 - 35203302
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggta 427  Q
    |||||||||||||||||| ||||||||||| ||| | ||||||||||||||||    
T  35203354 ttttatttcaattgtgatatttttattgtcttttcatagttaaagtgcgggta 35203302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 482
Target Start/End: Original strand, 42096746 - 42096854
Alignment:
Q  375 ttttatttcaattgtgatgtttt-tattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaag 473  Q
    ||||||||||||||||||||||| ||||||| ||| | ||  |||||||||||||||| | | ||||||  |||||| |||||||||   |||||| |||    
T  42096746 ttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccatagggtatggggaag 42096845  T
Q  474 gacactaaa 482  Q
    | |||||||    
T  42096846 ggcactaaa 42096854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 378 - 453
Target Start/End: Complemental strand, 7940431 - 7940356
Alignment:
Q  378 tatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggt 453  Q
    |||||||||||||||||||||| | || ||| | || ||||||||||||||||||| | ||||||  |||||||||    
T  7940431 tatttcaattgtgatgtttttactatcttttcatagctaaagtgcgggtaatggatgcgggtatgggcacttaggt 7940356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 375 - 482
Target Start/End: Complemental strand, 12905718 - 12905611
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||| ||||| ||||| ||| | |||||||||||| ||||||| | |  ||||   ||||||||| |||||| | | |||| ||||    
T  12905718 ttttatttcaattgtgatatttttgttgtcatttcatagttaaagtgcgagtaatgggtgcgagtatagacacttaggtacccatagagtttggggaagg 12905619  T
Q  475 acactaaa 482  Q
    ||||||||    
T  12905618 acactaaa 12905611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 335 - 459
Target Start/End: Complemental strand, 8340286 - 8340160
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg--tttttattgtccttttacagttaaagtgcgggtaatgga 432  Q
    |||||||||||||||||||| |||       ||| || | |||||||||||||||| ||  ||||||||||| ||| | ||||||| |||||||||| |     
T  8340286 tactattttatgagttgattcgaaattttttggatcatagttttatttcaattgtggtggttttttattgtcttttcatagttaaaatgcgggtaatagg 8340187  T
Q  433 ttcaggtatgaccacttaggtgcccat 459  Q
    | | ||||||  |||||||||||||||    
T  8340186 tgcgggtatgggcacttaggtgcccat 8340160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 429
Target Start/End: Complemental strand, 40564046 - 40563992
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaat 429  Q
    ||||||||||||||||||||||||||| || ||| |  |||||||||||||||||    
T  40564046 ttttatttcaattgtgatgtttttattttcttttcattgttaaagtgcgggtaat 40563992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 499
Target Start/End: Complemental strand, 19454949 - 19454765
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgt--gatgtttttattgtcctttt-acag 413  Q
    ||||||||| |||||   || |||||||||||||||||||||       ||| || |||||||||||||||||  | | ||||||||||| |||| | ||    
T  19454949 gctaaatactacgattcatattattttatgagttgatttgaaattttttggatcataattttatttcaattgtgggttttttttattgtctttttcatag 19454850  T
Q  414 ttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    ||||| || ||||||||| | ||| ||||  |||||| ||||||||| | |||||| ||||  ||| ||| ||||||| |||||||    
T  19454849 ttaaaatgtgggtaatgggtgcagatatggacacttaagtgcccatagagtatggggaagggtact-aaagttgttgcccacgagg 19454765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 45079209 - 45079333
Alignment:
Q  375 ttttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaag 473  Q
    ||||||||||||||||||| ||||||||||| ||| |  |  |||||||||||||||| | | ||||||  |||||| |||||||||   |||||| |||    
T  45079209 ttttatttcaattgtgatgttttttattgtcttttcatcgagaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccatagggtatggggaag 45079308  T
Q  474 gacactaaaatttgttgcacacgagg 499  Q
    | |||| ||| ||||||| |||||||    
T  45079309 ggcact-aaagttgttgcccacgagg 45079333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 431
Target Start/End: Original strand, 26787602 - 26787657
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||| |||||||||||||||| |||||| | |||||||| |||||||||    
T  26787602 ttttatttcaatggtgatgtttttattgt-cttttataattaaagtgtgggtaatgg 26787657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 14418376 - 14418284
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggta 427  Q
    |||||||||||||| |||||||||       | || | ||||||| |||||||||||| |||||||| || ||| | ||||||||||||||||    
T  14418376 tactattttatgaggtgatttgaaattttttgaactataattttaattcaattgtgatatttttattatcttttcatagttaaagtgcgggta 14418284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 433
Target Start/End: Original strand, 22845125 - 22845191
Alignment:
Q  366 ggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggat 433  Q
    |||||| | ||||||||||| |||||||||||||||||| ||| | ||||||| ||| ||||||||||    
T  22845125 ggaccatagttttatttcaaatgtgatgtttttattgtcttttcatagttaaaatgc-ggtaatggat 22845191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 442
Target Start/End: Original strand, 24987411 - 24987478
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatg 442  Q
    |||||||||| ||||||||||||| ||||  ||  | |||||||||||||||||||||| | ||||||    
T  24987411 ttttatttcatttgtgatgttttttttgtttttccatagttaaagtgcgggtaatggatgcgggtatg 24987478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 415 - 482
Target Start/End: Original strand, 30964594 - 30964661
Alignment:
Q  415 taaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    |||| ||||| |||||| | ||||||||| |||||| ||| ||||| |||||||||||||||| ||||    
T  30964594 taaattgcggataatgggtgcaggtatgaacacttaagtgtccatagaatatgggaaaggacattaaa 30964661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 415 - 482
Target Start/End: Original strand, 30980406 - 30980473
Alignment:
Q  415 taaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    |||| ||||| |||||| | ||||||||| |||||| ||| ||||| |||||||||||||||| ||||    
T  30980406 taaattgcggataatgggtgcaggtatgaacacttaagtgtccatagaatatgggaaaggacattaaa 30980473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 426
Target Start/End: Complemental strand, 33099749 - 33099698
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggt 426  Q
    |||||||||||||||||| ||||||||||| ||| | |||||||||| ||||    
T  33099749 ttttatttcaattgtgatatttttattgtcttttcatagttaaagtgagggt 33099698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 6408678 - 6408592
Alignment:
Q  375 ttttatttcaattgtgatgtttttatt-gtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||| ||||||||||||| || ||  ||| | |||||||||||||||||||| | | ||||||  ||||||||| ||||||    
T  6408678 ttttatttcatttgtgatgtttttttttgttttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggtacccata 6408592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 453
Target Start/End: Complemental strand, 19618788 - 19618710
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggt 453  Q
    |||||||||| ||||||||||||| ||||  | | | |||||||||||||||||||| | | ||||||  |||||||||    
T  19618788 ttttatttcatttgtgatgttttttttgttttatcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggt 19618710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 409
Target Start/End: Original strand, 23298332 - 23298366
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtcctttt 409  Q
    |||||||||||||||||||||||||||||| ||||    
T  23298332 ttttatttcaattgtgatgtttttattgtcttttt 23298366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 27064296 - 27064210
Alignment:
Q  375 ttttatttcaattgtgatgttttt-attgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||||| ||||||||||| |||| | ||||| | |||||||| ||||||||| | | ||| ||  ||||||||||||||||    
T  27064296 ttttatttcaatggtgatgttttttattgcctttttataattaaagtgtgggtaatgggtacgggtgtgggcacttaggtgcccata 27064210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 25630323 - 25630368
Alignment:
Q  376 tttatttcaattgtgatgtttttattgtccttttacagttaaagtg 421  Q
    ||||||||||||||||||||||||||||  ||| | ||||||||||    
T  25630323 tttatttcaattgtgatgtttttattgttttttcatagttaaagtg 25630368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 9e-26; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 41983356 - 41983233
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| | ||||||||| ||||||||| |||||| |  || ||||| |    
T  41983356 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtaatgggtgcaggtatgagcacttaggtacccatagagcataggaaatg 41983257  T
Q  475 acactaaaatttgttgcacacgagg 499  Q
    ||||| ||| ||||||| |||||||    
T  41983256 acact-aaagttgttgcccacgagg 41983233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 373 - 482
Target Start/End: Original strand, 22632242 - 22632351
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaa 472  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||  | ||||||||| ||||||||| |||||||  |||||| ||    
T  22632242 aattttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtaatgagtgcaggtatgatcacttaggtacccataaggtatggggaa 22632341  T
Q  473 ggacactaaa 482  Q
     | |||||||    
T  22632342 tggcactaaa 22632351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 373 - 499
Target Start/End: Complemental strand, 7978141 - 7978016
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaa 472  Q
    |||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||| | | ||||||| ||||||| | ||||||   |||||| ||    
T  7978141 aattttatttcaattgtgatgtttttattgttttttcatagttaaagtgcgggtaatgggtgcgggtatgagcacttagatacccatagggtatggggaa 7978042  T
Q  473 ggacactaaaatttgttgcacacgagg 499  Q
    || |||| ||| ||||||| |||||||    
T  7978041 gggcact-aaagttgttgcccacgagg 7978016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 504
Target Start/End: Original strand, 16620312 - 16620441
Alignment:
Q  375 ttttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaag 473  Q
    ||||||||||||||||||| ||||||||||| ||| |  | ||||||| || |||||| | || |||||| |||||||||| |||||||||||||  |||    
T  16620312 ttttatttcaattgtgatgctttttattgtcttttcattgctaaagtgtggataatgggtacaagtatgagcacttaggtgtccataaaatatggagaag 16620411  T
Q  474 gacactaaaatttgttgcacacgaggataca 504  Q
    |||||| ||| ||||||| |||||| |||||    
T  16620412 gacact-aaagttgttgcccacgagaataca 16620441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 29455899 - 29455776
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    ||||||||||||||||||||||||||| || ||| | |||||||||| ||||||||| | | ||||||  ||||||| | |||||||  |||||| ||||    
T  29455899 ttttatttcaattgtgatgtttttattatcttttcatagttaaagtgtgggtaatgggtgcgggtatgggcacttagatacccataaggtatggggaagg 29455800  T
Q  475 acactaaaatttgttgcacacgagg 499  Q
     |||| ||| ||||||| |||||||    
T  29455799 gcact-aaagttgttgcccacgagg 29455776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 24489032 - 24489128
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    ||||||||||||||||||||||||       | |||| | |||||||||||||||||| ||||||||||| ||| | |||||||||| |||||||||    
T  24489032 tactattttatgagttgatttgaaaatttttgaaccatagttttatttcaattgtgatatttttattgtcttttcatagttaaagtgtgggtaatgg 24489128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 319 - 504
Target Start/End: Complemental strand, 16186933 - 16186748
Alignment:
Q  319 taaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagttaa 417  Q
    ||||||| ||||| | ||||||||||| ||||||||||||       ||| || ||||||||||||||| || ||||||| |||||| ||| || |||||    
T  16186933 taaatactacgatttatactattttattagttgatttgaaattttttggatcataattttatttcaattatggtgttttttattgtcttttcacggttaa 16186834  T
Q  418 agtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatg-ggaaaggacactaaaatttgttgcacacgaggataca 504  Q
    |||||||||||||| | |  |||||  |||||| || |||||||| |||| |||||||| ||| ||| ||||||| ||||||| ||||    
T  16186833 agtgcgggtaatgggtgcgtgtatgggcacttaagtacccataaagtatgtggaaagga-act-aaagttgttgctcacgagggtaca 16186748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 427
Target Start/End: Original strand, 6224845 - 6224897
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggta 427  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  6224845 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggta 6224897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 18595477 - 18595413
Alignment:
Q  367 gaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    ||||| |||||||||||||||||||| ||||||||||  ||||| ||||||||||||| ||||||    
T  18595477 gaccataattttatttcaattgtgatatttttattgtttttttatagttaaagtgcggataatgg 18595413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 313 - 429
Target Start/End: Original strand, 23141560 - 23141677
Alignment:
Q  313 ttttgctaaataccacgatgt-gtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttac 411  Q
    ||||| ||||||| ||||| | ||||| |||||||||| ||||||||       | |||| |||||||||||||||||||| ||||||||||| ||| |     
T  23141560 ttttgttaaatactacgattttgtacttttttatgagtcgatttgaaaaattgtgaaccacaattttatttcaattgtgatatttttattgtcttttcat 23141659  T
Q  412 agttaaagtgcgggtaat 429  Q
    ||||||| ||||||||||    
T  23141660 agttaaaatgcgggtaat 23141677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 431
Target Start/End: Original strand, 31149694 - 31149750
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||| ||||||    
T  31149694 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcggataatgg 31149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 335 - 482
Target Start/End: Original strand, 4901901 - 4902047
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg--tttttattgtccttttacagttaaagtgcgggtaatgga 432  Q
    ||||||||||||||||||||||||       ||| || | |||||||||||||||||||  ||||||||||| ||| | |||||   ||||||||||||     
T  4901901 tactattttatgagttgatttgaaattttttggatcatatttttatttcaattgtgatgcttttttattgtcttttcatagtta---tgcgggtaatggg 4901997  T
Q  433 ttcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    | | ||||||  ||||||||||||||||   |||||| |||| |||||||    
T  4901998 tgcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaa 4902047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 317 - 499
Target Start/End: Original strand, 639302 - 639484
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg-tttttattgtccttttacagtt 415  Q
    ||||||||| ||||| | ||||||||||| ||||||||||||       ||| || |||||||||||||||||| || |||||||| || ||| |  |||    
T  639302 gctaaatactacgatttatactattttattagttgatttgaaattttttggatcataattttatttcaattgtggtgttttttattttcttttcatggtt 639401  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    || ||||||||||| ||| | ||||||  |||||| || ||||||   |||||| || |||||| ||| ||||||| |||||||    
T  639402 aatgtgcgggtaattgatgcgggtatgggcacttaagtacccatagggtatggggaaagacact-aaagttgttgcccacgagg 639484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 431
Target Start/End: Complemental strand, 14087773 - 14087715
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||||||||||||||||||||||  ||| | ||||||||||||| ||||||    
T  14087773 aattttatttcaattgtgatgtttttattgttttttcatagttaaagtgcggataatgg 14087715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 4572376 - 4572291
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||| ||||||||||||| ||||| ||| | ||||||||||||| |||||||| |  |||||| ||||||| | ||||||    
T  4572376 ttttatttcatttgtgatgttttttttgtcttttcatagttaaagtgcggataatggatgcgagtatgagcacttagatacccata 4572291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 36470441 - 36470557
Alignment:
Q  366 ggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaata 465  Q
    |||||| | |||||||||||||||||||||||||||    ||| | || |||||||| |||||||| | | ||||||  ||||||||| |||||| | ||    
T  36470441 ggaccatagttttatttcaattgtgatgtttttattcctttttcatagctaaagtgctggtaatgggtgcgggtatggacacttaggtacccatagagta 36470540  T
Q  466 tgggaaaggacactaaa 482  Q
    |||| |||| |||||||    
T  36470541 tggggaagggcactaaa 36470557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 453
Target Start/End: Complemental strand, 14088376 - 14088298
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggt 453  Q
    |||||||||| ||||||||||||| ||||  ||| | |||||||||||||||||||| | | ||||||  |||||||||    
T  14088376 ttttatttcatttgtgatgttttttttgttttttcatagttaaagtgcgggtaatgggtacgggtatgggcacttaggt 14088298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 34718782 - 34718868
Alignment:
Q  375 ttttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    ||||||||||||||||||| ||||||||||| ||| | ||  |||||||||||||||| |   ||||||| |||||| |||||||||    
T  34718782 ttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccata 34718868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 41692466 - 41692552
Alignment:
Q  375 ttttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    ||||||||||||||||||| ||||||||||| ||| | ||  |||||||||||||||| |   ||||||| |||||| |||||||||    
T  41692466 ttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccata 41692552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 482
Target Start/End: Original strand, 19254428 - 19254594
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg-tttttattgtccttttacagtt 415  Q
    ||||||||| |||||   ||||||||||| ||||||||| ||       ||| || | ||||||||||||||||||| ||||||||||| ||| | ||      
T  19254428 gctaaatactacgattcatactattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagag 19254527  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    |||||||||||||||| | | ||||||  |||||| |||| ||||   |||||| |||| |||||||    
T  19254528 aaagtgcgggtaatgggtgcgggtatgggcacttaagtgctcatagggtatggggaagggcactaaa 19254594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 317 - 485
Target Start/End: Complemental strand, 38309943 - 38309774
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgt-ttttattgtccttttacagtt 415  Q
    ||||||||  |||||  |||||||||||| ||||||||| ||       ||| || | |||||||||||||||||||| |||| ||||| ||| | ||      
T  38309943 gctaaatattacgattcgtactattttattagttgatttaaataatttcggatcatagttttatttcaattgtgatgttttttgttgtcttttcatagag 38309844  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatt 485  Q
    ||||||||| |||||  | | ||||||| |||||| |||||||||   |||||||||||  |||||||||    
T  38309843 aaagtgcggataatgtgtgcgggtatgagcacttaagtgcccatagggtatgggaaagggtactaaaatt 38309774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 339 - 460
Target Start/End: Original strand, 15673941 - 15674064
Alignment:
Q  339 attttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg--tttttattgtccttttacagttaaagtgcgggtaatggattca 436  Q
    ||||||||||||||||||||       ||| || |||| ||||||| ||||| ||  ||||||||||| ||| | ||||||| ||||| |||||| | |     
T  15673941 attttatgagttgatttgaaattttctggatcataattgtatttcagttgtggtgcttttttattgtcttttcagagttaaattgcggataatgggtgcg 15674040  T
Q  437 ggtatgaccacttaggtgcccata 460  Q
    ||||||  ||||||||||||||||    
T  15674041 ggtatggacacttaggtgcccata 15674064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 415 - 482
Target Start/End: Complemental strand, 32302457 - 32302390
Alignment:
Q  415 taaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    ||||||||||||||||| | | ||||||  |||||| ||||||||||  |||||| ||||||||||||    
T  32302457 taaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccataaggtatggggaaggacactaaa 32302390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 429
Target Start/End: Complemental strand, 36323188 - 36323077
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagtta 416  Q
    ||||||||| |||||   || ||||| |||||||||||||||       |||||| | ||||||| |||| |||||||||||||||||| || | |||||    
T  36323188 gctaaatactacgattcatattatttgatgagttgatttgaaaaattttggaccatagttttattccaatcgtgatgtttttattgtcc-ttcatagtta 36323090  T
Q  417 aagtgcgggtaat 429  Q
    ||||||| |||||    
T  36323089 aagtgcgagtaat 36323077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 6e-24; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 317 - 526
Target Start/End: Complemental strand, 2960108 - 2959899
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagtt 415  Q
    ||||||||| || ||  |||||||||||||||||||||||||       ||| || |||||||||||||||||||||||||| |||||| ||| | ||||    
T  2960108 gctaaatactacaattcgtactattttatgagttgatttgaaattttttggatcataattttatttcaattgtgatgttttttattgtcatttcatagtt 2960009  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgaggatacaattatttttta 515  Q
    |||||||||||||| |||   ||||||  ||||||||||||||||    ||||| |||| |||| ||| || |||| |||||||||||    ||||||||    
T  2960008 aaagtgcgggtaatagatgtgggtatggacacttaggtgcccatacggaatggggaagggcact-aaagttattgcccacgaggatacggacatttttta 2959910  T
Q  516 caaatgcgggt 526  Q
    ||||| |||||    
T  2959909 caaatacgggt 2959899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 375 - 531
Target Start/End: Original strand, 43702414 - 43702569
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| | ||||||  ||||||||| ||||||   |||||| |||     
T  43702414 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtaatggatgcgggtatgggcacttaggtacccatagggtatggggaaga 43702513  T
Q  475 acactaaaatttgttgcacacgaggatacaattattttttacaaatgcgggtgtggg 531  Q
     |||| ||| ||||| | ||||||| ||| | || |||||||||||| |||| ||||    
T  43702514 gcact-aaagttgttacccacgagggtacgaataatttttacaaatgtgggtatggg 43702569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 317 - 499
Target Start/End: Complemental strand, 44300886 - 44300704
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagtt 415  Q
    ||||||||| |||||  |||||||||||| ||||||||| ||       ||| || | |||||||||||||||||||||||| |||||| ||| | ||      
T  44300886 gctaaatactacgattcgtactattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagag 44300787  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    ||||||||||||| || | ||||||||  |||||| |||||||||| ||||||| |||| |||| ||| ||||||| |||||||    
T  44300786 aaagtgcgggtaacgggtgcaggtatgggcacttaagtgcccataagatatggggaagggcact-aaagttgttgcccacgagg 44300704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 482
Target Start/End: Complemental strand, 43224434 - 43224325
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaa 472  Q
    |||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||| | ||||||||  ||||||| | ||||||   |||||| ||    
T  43224434 aattttatttcaattgtgatgtttttattgttttttcatagttaaagtgcgggtaatgggtgcaggtatgggcacttagatacccatagggtatggggaa 43224335  T
Q  473 ggacactaaa 482  Q
    || |||||||    
T  43224334 gggcactaaa 43224325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 524
Target Start/End: Original strand, 5924068 - 5924218
Alignment:
Q  375 ttttatttcaattgtgatg--tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaa 472  Q
    |||||||||||||||||||  ||||||||||| ||| | |||||||||||||||||||| | ||||||||  |||||||||||||| |   |||||| ||    
T  5924068 ttttatttcaattgtgatgcttttttattgtcttttcatagttaaagtgcgggtaatgggtgcaggtatggacacttaggtgcccacagggtatggggaa 5924167  T
Q  473 ggacactaaaatttgttgcacacgaggatacaattattttttacaaatgcgg 524  Q
    || |||| ||| ||||| | ||||||| |||   ||||||||||||| ||||    
T  5924168 gggcact-aaagttgttacccacgagggtacgggtattttttacaaacgcgg 5924218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 482
Target Start/End: Original strand, 36074121 - 36074231
Alignment:
Q  373 aattttatttcaattgtgatgttttta-ttgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaa 471  Q
    ||||||||||||||||||||||||||| |||||  |||| | |||||||||||||||||| | | ||||||  ||||||||||||||||   |||||| |    
T  36074121 aattttatttcaattgtgatgtttttaattgtctatttataattaaagtgcgggtaatgggtacgggtatgggcacttaggtgcccatagggtatgggga 36074220  T
Q  472 aggacactaaa 482  Q
    ||| |||||||    
T  36074221 agggcactaaa 36074231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 333 - 503
Target Start/End: Original strand, 38469876 - 38470046
Alignment:
Q  333 tgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagttaaagtgcgggtaatgg 431  Q
    ||||||||||||| ||||||||||||       |||  | | |||||||| ||||||| ||||||| |||||  ||||||||||||||||||||||||||    
T  38469876 tgtactattttataagttgatttgaaattttatggattatagttttattttaattgtggtgttttttattgtatttttacagttaaagtgcgggtaatgg 38469975  T
Q  432 attcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgaggatac 503  Q
     | | ||||||  |||||| ||||||||    |||||| ||||  ||||||| ||||||| |||||||||||    
T  38469976 gtgcgggtatgggcacttaagtgcccattgggtatggggaagggtactaaaa-ttgttgcccacgaggatac 38470046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 9477760 - 9477708
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggta 427  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  9477760 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggta 9477708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 376 - 460
Target Start/End: Original strand, 30738635 - 30738719
Alignment:
Q  376 tttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||| |   ||||||  ||||||||| ||||||    
T  30738635 tttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcaggtaatgggtgtgggtatgggcacttaggtacccata 30738719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 453
Target Start/End: Original strand, 3551536 - 3551611
Alignment:
Q  378 tatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggt 453  Q
    |||||||||||||||||||| |||||| ||| | |||||||||| ||||||||||| | ||||||  |||||||||    
T  3551536 tatttcaattgtgatgttttcattgtcttttcatagttaaagtgtgggtaatggatacgggtatggacacttaggt 3551611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 317 - 460
Target Start/End: Original strand, 28067212 - 28067356
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttt-tattgtccttttacagtt 415  Q
    ||||||||| || || | ||||||||||| ||||||||||||       ||| || |||||||||||||||||| |||||| ||||||| ||| |  |||    
T  28067212 gctaaatactacaatttatactattttattagttgatttgaaattttttggatcataattttatttcaattgtggtgttttttattgtcttttcatggtt 28067311  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    ||||||| |||||||| | ||||||||  |||||| || ||||||    
T  28067312 aaagtgcaggtaatgggtgcaggtatgggcacttaagtacccata 28067356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 318 - 460
Target Start/End: Complemental strand, 30391720 - 30391577
Alignment:
Q  318 ctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagtta 416  Q
    |||||||| |||||   ||||||||||||||||||||||||       ||| ||   |||||||||||||||| ||||||| |||||| ||| |  ||||    
T  30391720 ctaaatactacgattcatactattttatgagttgatttgaaattttttggatcatggttttatttcaattgtgctgttttttattgtcttttcatggtta 30391621  T
Q  417 aagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||| |||||||| | ||||||  |||||| |||||||||    
T  30391620 aagtgcggataatggatgcgggtatgggcacttaagtgcccata 30391577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 317 - 482
Target Start/End: Original strand, 1875982 - 1876150
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtga---tgtttttattgtccttttacag 413  Q
    ||||||||| |||||   || |||||||||||||||||||||       ||| || |||||||||||||||| |    | ||||||||||| ||| | ||    
T  1875982 gctaaatactacgattgatattattttatgagttgatttgaaattttttggatcataattttatttcaattgcgggtttttttttattgtcttttcatag 1876081  T
Q  414 ttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    ||||| |||||||||||| | | ||||||  ||||||||||||||||   |||||| |||| |||||||    
T  1876082 ttaaaatgcgggtaatgggtgcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaa 1876150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 19805152 - 19805067
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||| ||||||| ||||| ||||  ||| | |||||||||||||||||||| | | ||||||| ||||||||| ||||||    
T  19805152 ttttatttcatttgtgatattttttttgttttttcatagttaaagtgcgggtaatgggtgcgggtatgagcacttaggtacccata 19805067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 375 - 468
Target Start/End: Original strand, 38398432 - 38398525
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgg 468  Q
    ||||||||||||||| |||||||||||||| ||| | ||||||||||  ||||| |||| ||||||||  || ||||||| | ||||| |||||    
T  38398432 ttttatttcaattgtaatgtttttattgtcttttcatagttaaagtgtaggtaacggatgcaggtatggacagttaggtgtcaataaagtatgg 38398525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 431
Target Start/End: Complemental strand, 16278543 - 16278487
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||| ||||||||||||||||||||||| ||||| | |||||||| |||||||||    
T  16278543 ttttatatcaattgtgatgtttttattgtctttttataattaaagtgtgggtaatgg 16278487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 40789473 - 40789638
Alignment:
Q  318 ctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg-tttttattgtccttttacagtta 416  Q
    |||||||  ||||| ||||||||||||| ||||||||| ||       ||| || | ||||||||||||||||||| ||||||||||  ||| | ||  |    
T  40789473 ctaaatattacgatttgtactattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgttttttcatagaga 40789572  T
Q  417 aagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    ||||||||||||||  | | ||||||  |||||| |||||||||   ||||||||||| |||||||    
T  40789573 aagtgcgggtaatgagtgcgggtatgggcacttaagtgcccatagggtatgggaaagggcactaaa 40789638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 431
Target Start/End: Complemental strand, 42284619 - 42284563
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||| || ||||||    
T  42284619 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgtggataatgg 42284563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 375 - 442
Target Start/End: Original strand, 38400974 - 38401041
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatg 442  Q
    ||||||||||||||| |||||||||||||| ||| | ||||||||||  ||||| |||| ||||||||    
T  38400974 ttttatttcaattgtaatgtttttattgtcttttcatagttaaagtgtaggtaacggatgcaggtatg 38401041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 335 - 460
Target Start/End: Complemental strand, 45112350 - 45112223
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt--attgtccttttacagttaaagtgcgggtaatgga 432  Q
    ||||||||||||||||||||||||       ||| || |||| ||||||| ||||| || ||||  |||||| ||| | ||||||| | ||||||||||     
T  45112350 tactattttatgagttgatttgaaattttatggatcataattgtatttcagttgtggtgctttttcattgtcttttcagagttaaactacgggtaatggg 45112251  T
Q  433 ttcaggtatgaccacttaggtgcccata 460  Q
    | | ||||||| ||||||||||||||||    
T  45112250 tgcgggtatgagcacttaggtgcccata 45112223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 17172218 - 17172304
Alignment:
Q  375 ttttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    ||||||||||||||||||| ||||||||||| ||| | ||  |||||||||||||||| |   ||||||| |||||| |||||||||    
T  17172218 ttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccata 17172304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 317 - 499
Target Start/End: Original strand, 40342257 - 40342439
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtga-tgtttttattgtccttttacagtt 415  Q
    ||||||||| |||||   || |||||||| ||||||||||||       ||| || | ||||||||||||||||  | ||||||||||| ||| | ||||    
T  40342257 gctaaatactacgattcatattattttattagttgatttgaaattttttggatcatagttttatttcaattgtgggtttttttattgtcttttcatagtt 40342356  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    ||| ||||||||||||||   ||||||  |||||||||||| |||   |||||| |||| |||| ||| ||||||| |||||||    
T  40342357 aaaatgcgggtaatggatgggggtatgggcacttaggtgcctatagggtatggggaagggcact-aaagttgttgcccacgagg 40342439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 499
Target Start/End: Original strand, 48558643 - 48558807
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttt-tattgtccttttacagttaaagtgcgggtaatggat 433  Q
    ||||||||||||||||||||||||       ||| ||   ||||||||||| |||| |||||| ||||||| ||| |  |||||||||||||||||||||    
T  48558643 tactattttatgagttgatttgaaattttttggatcatggttttatttcaactgtgctgttttttattgtcttttcatggttaaagtgcgggtaatggat 48558742  T
Q  434 tcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
     | | ||||  |||||| ||| |||||   |||||| |||| |||| ||| ||||||| |||||||    
T  48558743 gcggatatggacacttaagtggccatagggtatggggaagggcact-aaagttgttgcccacgagg 48558807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 339 - 499
Target Start/End: Complemental strand, 36072757 - 36072596
Alignment:
Q  339 attttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg--tttttattgtccttttacagttaaagtgcgggtaatggattca 436  Q
    ||||||||||||||| ||||       ||| || |||| ||||| | ||||||||  ||||||||||| ||| | ||||||| |||||||||| | | |     
T  36072757 attttatgagttgatgtgaaattttcaggatcataattgtattttagttgtgatgcttttttattgtcttttcagagttaaattgcgggtaattggtgcg 36072658  T
Q  437 ggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    ||||||  ||||||||||||||||   |||||| |||| |||| ||| ||||||| |||||||    
T  36072657 ggtatgggcacttaggtgcccatagggtatggggaagggcact-aaagttgttgcccacgagg 36072596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 43218721 - 43218675
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtg 421  Q
    |||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  43218721 ttttatttcaattgtgatatttttattgtcttttcatagttaaagtg 43218675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 311
Target Start/End: Original strand, 18319880 - 18319969
Alignment:
Q  222 acaccaaggcaccactttggattccacctccactcgtagaacaaacaaggttgaattttcagcctagctaaactccaactccacgacaac 311  Q
    |||||||| |||||| | |||||||| ||||| ||  |||||||||| || ||||| |||| ||| ||||| |||||  |||||||||||    
T  18319880 acaccaagacaccacctcggattccatctccattcaaagaacaaacatggctgaatcttcaacctcgctaagctccacttccacgacaac 18319969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 21153314 - 21153261
Alignment:
Q  375 ttttatttcaattgtgatgttttt-attgtccttttacagttaaagtgcgggta 427  Q
    |||||||||||||||| ||||||| |||||| |||||  |||||||||||||||    
T  21153314 ttttatttcaattgtggtgttttttattgtctttttatggttaaagtgcgggta 21153261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 448
Target Start/End: Original strand, 25309513 - 25309586
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccact 448  Q
    ||||||||| |||||||| ||||||||||| | |   |||||||||||||||| ||| | ||||||||| ||||    
T  25309513 ttttatttccattgtgatatttttattgtcttctcgtagttaaagtgcgggtagtgggtgcaggtatgaacact 25309586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 6e-24; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 318 - 460
Target Start/End: Complemental strand, 610874 - 610732
Alignment:
Q  318 ctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaa 417  Q
    |||||||| ||||| |||||| ||||||||||| |||| ||       |||||| |||||||||||||||||||||||||||||||| ||| | ||||||    
T  610874 ctaaatactacgatttgtactcttttatgagttaattttaaaaaatttggaccataattttatttcaattgtgatgtttttattgtcttttcatagttaa 610775  T
Q  418 agtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||||||| | | ||||||  |||||| || ||||||    
T  610774 agtgcgggtaatgggtgcgggtatgtgcacttaagtacccata 610732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 375 - 503
Target Start/End: Complemental strand, 945587 - 945460
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| | | ||||||  ||||||| | ||||||  ||||||| ||||    
T  945587 ttttatttcaattgtgatgtttttattgtctttttataattaaagtgcgggtaatgggtgcgggtatgggcacttagatacccataggatatggggaagg 945488  T
Q  475 acactaaaatttgttgcacacgaggatac 503  Q
     |||| ||| ||||||| |||||||||||    
T  945487 gcact-aaagttgttgcccacgaggatac 945460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 335 - 460
Target Start/End: Original strand, 29512173 - 29512298
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggatt 434  Q
    |||||||||||||||| |||| ||       |||||| | |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||     
T  29512173 tactattttatgagttaattttaaaaaaattggaccatagttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtaatggatg 29512272  T
Q  435 caggtatgaccacttaggtgcccata 460  Q
    ||| ||||  ||||||||| ||||||    
T  29512273 cagatatgtgcacttaggtacccata 29512298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 375 - 485
Target Start/End: Original strand, 32835511 - 32835621
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||  | | ||||||| ||||||||| |||||||| |||| | ||||    
T  32835511 ttttatttcaattgtgatatttttattgtcttttcatagttaaagtgcgggtaatgagtgcgggtatgagcacttaggtacccataaagtatgaggaagg 32835610  T
Q  475 acactaaaatt 485  Q
     ||||||||||    
T  32835611 gcactaaaatt 32835621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 19996676 - 19996799
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||||||||||||||| ||| | ||| |||||||||||||||| | | ||||||| ||||||| | ||||||   |||||| ||||    
T  19996676 ttttatttcaattgtgatgtttttattgtcttttcatagtcaaagtgcgggtaatgggtgcgggtatgaacacttagatacccatagggtatggggaagg 19996775  T
Q  475 acactaaaatttgttgcacacgagg 499  Q
     |||| ||| ||||||| |||||||    
T  19996776 gcact-aaagttgttgcccacgagg 19996799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 375 - 485
Target Start/End: Original strand, 31873302 - 31873412
Alignment:
Q  375 ttttatttcaattgtgatgttttt-attgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaag 473  Q
    |||||||||||||||||||||||| |||||| ||||| | |||||||| ||||| ||| | ||||||||| |||||||||||||| ||  |||||| ||     
T  31873302 ttttatttcaattgtgatgttttttattgtctttttataattaaagtgtgggta-tgggtacaggtatgaacacttaggtgcccacaaggtatggggaat 31873400  T
Q  474 gacactaaaatt 485  Q
    ||||||||||||    
T  31873401 gacactaaaatt 31873412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 318 - 499
Target Start/End: Complemental strand, 7842730 - 7842550
Alignment:
Q  318 ctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaa 417  Q
    |||||||| ||||| |||| ||||||||||||| |||| ||        ||||| | ||||||||||| |||||||||||||||||| ||| | ||||||    
T  7842730 ctaaatactacgatttgtattattttatgagttaattttaagagatttagaccatagttttatttcaagtgtgatgtttttattgtcttttcatagttaa 7842631  T
Q  418 agtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    |||||||||||||  | | ||||||  ||||||| | |||||| | |||||  |||| |||| ||| | |||||||||||||    
T  7842630 agtgcgggtaatgagtgcgggtatgggcacttagatacccatagagtatggagaagggcact-aaagtagttgcacacgagg 7842550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 375 - 503
Target Start/End: Complemental strand, 25059208 - 25059081
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    ||||||||||||||| ||||||||| |||| ||| | |||||||||||||||||||| | | ||||||  ||||||| | ||||||   |||||| ||||    
T  25059208 ttttatttcaattgtaatgtttttaatgtcttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttagatacccatagggtatggggaagg 25059109  T
Q  475 acactaaaatttgttgcacacgaggatac 503  Q
     |||| ||| ||||||| |||||||||||    
T  25059108 gcact-aaagttgttgcccacgaggatac 25059081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 375 - 482
Target Start/End: Complemental strand, 973616 - 973509
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||||||||||||||| ||| | | ||||||||||| |||||| | | | ||||  ||||||||| ||||||   ||||||||| |    
T  973616 ttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcggataatgggtgcggatatgtgcacttaggtacccatagggtatgggaaatg 973517  T
Q  475 acactaaa 482  Q
    ||||||||    
T  973516 acactaaa 973509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 375 - 482
Target Start/End: Complemental strand, 10786324 - 10786217
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||| ||||||||||| ||| | | ||||||| |||||||||  | ||||||||| |||| |||||| |||||| |||||  || |    
T  10786324 ttttatttcaattgtgatatttttattgtcttttcataattaaagtacgggtaatgagtgcaggtatgagcactaaggtgctcataaagtatggagaatg 10786225  T
Q  475 acactaaa 482  Q
    ||||||||    
T  10786224 acactaaa 10786217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 460
Target Start/End: Complemental strand, 20415134 - 20414990
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagtt 415  Q
    ||||||||| |||||  |||||||||||| ||||||||| ||       ||| || | |||||||||||||||||||||||| |||||| ||| | ||      
T  20415134 gctaaatactacgattcgtactattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagag 20415035  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||||||||| | | |||||| ||||||| |||||||||    
T  20415034 aaagtgcgggtaatgggtgcgggtatggccacttaagtgcccata 20414990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 376 - 499
Target Start/End: Complemental strand, 28221074 - 28220952
Alignment:
Q  376 tttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagga 475  Q
    |||||||||||||||||||||| |||||  ||| | |||||||||||||||||||| | | ||||||  ||||||| | ||||||   |||||||||||     
T  28221074 tttatttcaattgtgatgttttcattgttttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttagatacccatagggtatgggaaaggg 28220975  T
Q  476 cactaaaatttgttgcacacgagg 499  Q
    |||| ||| ||||||| |||||||    
T  28220974 cact-aaagttgttgcccacgagg 28220952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 336 - 485
Target Start/End: Complemental strand, 48985278 - 48985127
Alignment:
Q  336 actattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt--attgtccttttacagttaaagtgcgggtaatggat 433  Q
    |||||||||||||||||||||||       |||  | | |||||||||||||||||| |||||  |||||| ||| ||||||||| |||||||||||| |    
T  48985278 actattttatgagttgatttgaaattttatggattatagttttatttcaattgtgatatttttttattgtcttttcacagttaaaatgcgggtaatgggt 48985179  T
Q  434 tcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatt 485  Q
     ||||||||  |||||| |||||||||   |||| | |||||||| ||||||    
T  48985178 gcaggtatggacacttaagtgcccatagggtatgaggaaggacacaaaaatt 48985127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 334 - 503
Target Start/End: Complemental strand, 9473098 - 9472928
Alignment:
Q  334 gtactattttatgagttgatttgaannnnnnnggaccaaaattttattt-caattgtgatgt-ttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||| ||| ||||||||||||||       |||||| |||||||||| |||||||||| | |||||||||| ||| | |||||||||||| |||||||    
T  9473098 gtactagtttctgagttgatttgaaaattctgggaccataattttattttcaattgtgatatattttattgtcttttcatagttaaagtgcgagtaatgg 9472999  T
Q  432 attcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgaggatac 503  Q
     | | |||||||  |||||| | |||||||  |||||||||  ||||| ||| ||||||| |||||||||||    
T  9472998 gtgcgggtatgagtacttagatacccataaggtatgggaaaatacact-aaagttgttgcccacgaggatac 9472928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 460
Target Start/End: Original strand, 31107606 - 31107734
Alignment:
Q  333 tgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgga 432  Q
    ||||||||||||||| ||||||||||       |||||| |||||||||| ||||||||| |||||||||| |||| | | |||||||||| ||||||||    
T  31107606 tgtactattttatgacttgatttgaaaaaatttggaccataattttattttaattgtgatatttttattgt-ctttcatatttaaagtgcgagtaatgga 31107704  T
Q  433 ttca--ggtatgaccacttaggtgcccata 460  Q
    | ||  ||||||| |||||| || ||||||    
T  31107705 tacacgggtatgagcacttaagtacccata 31107734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 499
Target Start/End: Complemental strand, 19506490 - 19506367
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    ||||||||||||||||||||||||||| || ||| | |||||||||| ||||||||| | | ||||||  ||||||| | ||||||   |||||| ||||    
T  19506490 ttttatttcaattgtgatgtttttattatcttttcatagttaaagtgtgggtaatgggtgcgggtatgggcacttagatacccatagggtatggggaagg 19506391  T
Q  475 acactaaaatttgttgcacacgagg 499  Q
     |||| ||| ||||||| |||||||    
T  19506390 gcact-aaagttgttgcccacgagg 19506367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 38491513 - 38491461
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggta 427  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  38491513 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggta 38491461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 375 - 442
Target Start/End: Complemental strand, 424678 - 424611
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatg 442  Q
    |||||||||| ||||||||||||||||||| ||| | |||||||||| ||||||||| | ||||||||    
T  424678 ttttatttcatttgtgatgtttttattgtcttttcatagttaaagtgtgggtaatgggtgcaggtatg 424611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 375 - 430
Target Start/End: Original strand, 2975245 - 2975300
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatg 430  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||| ||||||||    
T  2975245 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgggggtaatg 2975300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 375 - 430
Target Start/End: Complemental strand, 2978526 - 2978471
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatg 430  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||| ||||||||    
T  2978526 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgggggtaatg 2978471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 482
Target Start/End: Original strand, 2465514 - 2465661
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggatt 434  Q
    ||||||||||||||||||||||||       | |||| | |||||||| ||||||||| ||||||||||| | | | ||||||||| || | ||||  |     
T  2465514 tactattttatgagttgatttgaaaaaatttgaaccatagttttattttaattgtgatatttttattgtcttctcatagttaaagtacgagcaatgagtg 2465613  T
Q  435 caggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    | ||||||| |||| | ||||||||||  |||||||||| ||||||||    
T  2465614 cgggtatgaacactaatgtgcccataagttatgggaaagaacactaaa 2465661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 375 - 430
Target Start/End: Complemental strand, 34321057 - 34321000
Alignment:
Q  375 ttttatttcaattgtgatgttttt--attgtccttttacagttaaagtgcgggtaatg 430  Q
    |||| |||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  34321057 ttttctttcaattgtgatgtttttttattgtccttttacaattaaagtgcgggtaatg 34321000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 335 - 519
Target Start/End: Original strand, 35949559 - 35949744
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg--tttttattgtccttttacagttaaagtgcgggtaatgga 432  Q
    ||||||||||||||||||||||||       ||| || | || ||||||| ||||| ||  ||||||||||| ||| | ||||||| ||||||||||||     
T  35949559 tactattttatgagttgatttgaaattttctggatcatagttgtatttcagttgtggtgcttttttattgtcttttcagagttaaactgcgggtaatggg 35949658  T
Q  433 ttcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgaggatacaattattttttacaaa 519  Q
    | | ||||||  |||||||||||||| |   |||||| || |||||| ||| ||||||  ||||||| ||| | |||||||||||||    
T  35949659 tgcgggtatgggcacttaggtgcccacagggtatggggaatgacact-aaagttgttgtccacgagggtacgaatattttttacaaa 35949744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 44327930 - 44328015
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||| ||||||||||||| ||||  ||| | |||||||||||||||||||| | | ||||||  ||||||||| ||||||    
T  44327930 ttttatttcatttgtgatgttttttttgttttttcatagttaaagtgcgggtaatgggtgcgggtatggacacttaggtacccata 44328015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 313 - 460
Target Start/End: Complemental strand, 48662828 - 48662679
Alignment:
Q  313 ttttgctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttt--tattgtcctttta 410  Q
    ||||||||||||| |||||   || |||||||||||||||||||||       |||  | ||||||||||||||||||   ||||  ||||||| ||| |    
T  48662828 ttttgctaaatactacgattcatattattttatgagttgatttgaaattttttggataataattttatttcaattgtgggtttttattattgtcttttca 48662729  T
Q  411 cagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
     | ||||| |||||||||||| | | ||||||| ||||||||||||||||    
T  48662728 taattaaaatgcgggtaatgggtgcgggtatgaacacttaggtgcccata 48662679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 482
Target Start/End: Complemental strand, 30489774 - 30489666
Alignment:
Q  375 ttttatttcaattgtgatgttttt-attgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaag 473  Q
    ||||||||||||| |||||||||| |||| | ||||| | |||||||||||||||||| | | |||||   |||||||||| |||||  ||||||| |||    
T  30489774 ttttatttcaattatgatgttttttattgactttttataattaaagtgcgggtaatgggtacgggtataggcacttaggtgtccataggatatggggaag 30489675  T
Q  474 gacactaaa 482  Q
    | |||||||    
T  30489674 ggcactaaa 30489666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 338 - 499
Target Start/End: Original strand, 31646262 - 31646422
Alignment:
Q  338 tattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcag 437  Q
    |||||||||||||||||||||       ||| || | ||||||||||||||||   ||||| ||||| ||| | ||||||| ||||||||| || | | |    
T  31646262 tattttatgagttgatttgaaattttttggatcatagttttatttcaattgtgggttttttgttgtcttttcatagttaaaatgcgggtaacgggtgcgg 31646361  T
Q  438 gtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    |||||  ||||||||||||||||   |||||| |||| |||| ||| ||||||| |||||||    
T  31646362 gtatgggcacttaggtgcccatagggtatggggaagggcact-aaagttgttgcccacgagg 31646422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 4893292 - 4893378
Alignment:
Q  375 ttttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    ||||||||||||||||||| ||||||||||| ||| | ||  |||||||||||||||| |   ||||||| |||||| |||||||||    
T  4893292 ttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccata 4893378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 29185195 - 29185109
Alignment:
Q  375 ttttatttcaattgtgatgt-ttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||||||||||||| |||||||||| ||| | ||  |||||||||||||||| |   ||||||| |||||| |||||||||    
T  29185195 ttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccata 29185109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 401
Target Start/End: Original strand, 13797032 - 13797098
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttatt 401  Q
    |||||||||||||||| |||| ||       |||||| |||||||||||||||||||||||||||||    
T  13797032 tactattttatgagttaattttaaaaaaattggaccataattttatttcaattgtgatgtttttatt 13797098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 375 - 482
Target Start/End: Complemental strand, 35659656 - 35659548
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgc-gggtaatggattcaggtatgaccacttaggtgcccataaaatat-gggaaa 472  Q
    |||||||||||||||||||||||||||||  ||| | |||||| |||| ||||||||| | || |||| | ||||||||| |||||||  ||| ||| ||    
T  35659656 ttttatttcaattgtgatgtttttattgt-atttcatagttaacgtgcggggtaatgggtgcatgtataaacacttaggtacccataaggtatgggggaa 35659558  T
Q  473 ggacactaaa 482  Q
    ||||||||||    
T  35659557 ggacactaaa 35659548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 3821275 - 3821334
Alignment:
Q  375 ttttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggat 433  Q
    ||||||||||||||||||| ||||||||||| ||| | ||||||||||||| ||| ||||    
T  3821275 ttttatttcaattgtgatgttttttattgtcttttcatagttaaagtgcggataagggat 3821334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 533
Target Start/End: Original strand, 29426333 - 29426471
Alignment:
Q  394 tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcac 493  Q
    |||||||| || ||| | ||||||| || ||||||||| | | ||||||  ||||||||||||||||   |||||| |||| |||| ||| ||||||| |    
T  29426333 tttttattatcttttcagagttaaactgtgggtaatgggtgcgggtatgggcacttaggtgcccatatggtatggggaagggcact-aaagttgttgccc 29426431  T
Q  494 acgaggatacaattattttttacaaatgcgggtgtgggat 533  Q
    |||||| |||   ||||||||||||| |||| | ||||||    
T  29426432 acgagggtacgggtattttttacaaacgcggatatgggat 29426471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 461
Target Start/End: Complemental strand, 50099921 - 50099834
Alignment:
Q  375 ttttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataa 461  Q
    |||||||||||||||| || |||||||| || ||| || |||||||||| |||||||| | | ||||||  |||||| ||||||||||    
T  50099921 ttttatttcaattgtggtgttttttattatcttttcacggttaaagtgcaggtaatgggtgcgggtatgggcacttaagtgcccataa 50099834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 21260746 - 21260800
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggta 427  Q
    |||||| ||||||||||||||||||||||||  ||| | |||||||||| |||||    
T  21260746 aattttgtttcaattgtgatgtttttattgttttttcatagttaaagtgtgggta 21260800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 29054605 - 29054691
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtcctttt-acagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||| ||||||||||||||||    |||| | |||||||||||||||||||| | | ||||||  ||||||||| ||||||    
T  29054605 ttttatttcatttgtgatgtttttatttattttttcatagttaaagtgcgggtaatgggtgcgggtatggacacttaggtacccata 29054691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 334 - 504
Target Start/End: Complemental strand, 8614704 - 8614535
Alignment:
Q  334 gtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggat 433  Q
    |||||||||||||||||||||||||       | ||||  |||||| |||||||| ||| ||||||||||| ||| | ||||||||||||| ||||||||    
T  8614704 gtactattttatgagttgatttgaaactttttgaaccatgattttagttcaattgagatatttttattgtcttttcatagttaaagtgcggataatggat 8614605  T
Q  434 tcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgaggataca 504  Q
     || ||| ||  ||| |||  ||||||| |||| ||||| |||||||||| ||||||| ||||||||||||    
T  8614604 gcaagtacgaggactaaggcacccataagatataggaaatgacactaaaa-ttgttgctcacgaggataca 8614535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 503
Target Start/End: Original strand, 1731044 - 1731171
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||||||||||||||| ||| | | |||||||||||  ||||||| ||||||||  ||||||||| |||||| | |||||| ||||    
T  1731044 ttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcggacaatggatgcaggtatgggcacttaggtacccatagagtatggggaagg 1731143  T
Q  475 acactaaaatttgttgcacacgaggatac 503  Q
      ||| ||||||||||  ||||| |||||    
T  1731144 gtact-aaatttgttgttcacgaagatac 1731171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 504
Target Start/End: Complemental strand, 14595418 - 14595289
Alignment:
Q  375 ttttatttcaattgtgatgttttt-attgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaag 473  Q
    |||||||||||| ||||| ||||| |||||| ||||| | |||||||||||||||||||| | ||||||| |||||||||| ||||||  |||||  ||     
T  14595418 ttttatttcaatggtgatattttttattgtcgttttataattaaagtgcgggtaatggatacgggtatgagcacttaggtgtccataaggtatggagaat 14595319  T
Q  474 gacactaaaatttgttgcacacgaggataca 504  Q
    |||||| ||| ||||| | ||||||||||||    
T  14595318 gacact-aaagttgttacccacgaggataca 14595289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 317 - 531
Target Start/End: Complemental strand, 22829914 - 22829700
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtga-tgtttttattgtccttttacagtt 415  Q
    ||||||||| |||||   || |||||||||||||||||||||       ||| || | ||||||||||||||||  | ||||||||||  ||| | ||||    
T  22829914 gctaaatactacgattcatattattttatgagttgatttgaaattttttggatcatagttttatttcaattgtgggtttttttattgttttttcatagtt 22829815  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgaggatacaattatttttta 515  Q
    ||| |||||||||||| | | ||||||  ||||||||||||||||   |||||| |||| |||| ||| ||||||| ||||||| |||   |||||||||    
T  22829814 aaaatgcgggtaatgggtgcgggtatgggcacttaggtgcccatagggtatggggaagggcact-aaagttgttgcccacgagggtacgggtatttttta 22829716  T
Q  516 caaatgcgggtgtggg 531  Q
    |||| |||||| ||||    
T  22829715 caaacgcgggtatggg 22829700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 373 - 482
Target Start/End: Original strand, 22313346 - 22313455
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaa 472  Q
    |||||||||||||||||||||||||||||||  ||| | ||||||||||||| |||||  | | ||||||  ||||||| | ||||||  ||||||| ||    
T  22313346 aattttatttcaattgtgatgtttttattgttttttcatagttaaagtgcggataatgagtgcgggtatggacacttagatacccataggatatggggaa 22313445  T
Q  473 ggacactaaa 482  Q
    ||||||||||    
T  22313446 ggacactaaa 22313455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 375 - 499
Target Start/End: Original strand, 34459624 - 34459747
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||||||||||||  | || |||||  ||||||| | ||||||   |||| | || |    
T  34459624 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtaatgagtgcaagtatgtgcacttagatacccatagggtatgaggaatg 34459723  T
Q  475 acactaaaatttgttgcacacgagg 499  Q
    ||||| ||| |||||||||||||||    
T  34459724 acact-aaagttgttgcacacgagg 34459747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 317 - 453
Target Start/End: Original strand, 51806865 - 51807002
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttt-tattgtccttttacagtt 415  Q
    ||||||||| ||||| | ||||||||||||||||| ||| ||       ||| || | |||||||||||| |||||||||| ||||||| ||||| | ||    
T  51806865 gctaaatactacgatttctactattttatgagttgcttttaaaaaaattggatcatagttttatttcaatggtgatgttttttattgtctttttataatt 51806964  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggt 453  Q
    |||||||||||||||| | ||||||||  |||||||||    
T  51806965 aaagtgcgggtaatgggtacaggtatgggcacttaggt 51807002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 482
Target Start/End: Complemental strand, 33983256 - 33983147
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaa 472  Q
    ||||||||||||||||||||||||| ||| |  ||| | |||||||||||||||||||| | | ||||||  ||||||| | ||||||  |||| |||||    
T  33983256 aattttatttcaattgtgatgttttcattattttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttagatacccataggatataggaaa 33983157  T
Q  473 ggacactaaa 482  Q
    || |||||||    
T  33983156 gggcactaaa 33983147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 333 - 422
Target Start/End: Original strand, 7117885 - 7117973
Alignment:
Q  333 tgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgc 422  Q
    ||||||||||||||||||||||||||       |||||| ||||||| |||||||||| |||||||||||| |||| | |||||||||||    
T  7117885 tgtactattttatgagttgatttgaaaaaatttggaccataattttagttcaattgtgttgtttttattgt-ctttcatagttaaagtgc 7117973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 319 - 499
Target Start/End: Original strand, 29405809 - 29405989
Alignment:
Q  319 taaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttatt-gtccttttacagttaa 417  Q
    ||||||| |||||  |||||||||||| ||||||||| ||       ||| || | |||||||||||||||||| ||||| || ||| ||| | ||  ||    
T  29405809 taaatactacgattcgtactattttattagttgatttaaataattttggatcatagttttatttcaattgtgatatttttttttgtcttttcatagagaa 29405908  T
Q  418 agtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    ||||||| |||||| | ||||||||  |||||||||||||||| | |||||| |||| |||| ||| ||||||| |||||||    
T  29405909 agtgcggataatgggtgcaggtatgggcacttaggtgcccatagagtatggggaagggcact-aaagttgttgcccacgagg 29405989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 482
Target Start/End: Complemental strand, 33733489 - 33733387
Alignment:
Q  381 ttcaattgtgatgttttt-attgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacact 479  Q
    |||||||||||||||||| |||||| ||| | ||  |||||||||||||||| | ||||||||  |||||| |||||||||   |||||| |||||||||    
T  33733489 ttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggtaatgggtgcaggtatgggcacttaagtgcccatagggtatggggaaggacact 33733390  T
Q  480 aaa 482  Q
    |||    
T  33733389 aaa 33733387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 3387209 - 3387294
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||| ||||||||||||| ||||| ||| | |||||||||||||||||||| | | ||||||  |||||| || ||||||    
T  3387209 ttttatttcatttgtgatgttttttttgtcttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaagtacccata 3387294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 2224950 - 2225034
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccat 459  Q
    |||||||||| ||||||| ||||| ||||  ||| | |||||||||||||||||||| | | ||||||| ||||||||| |||||    
T  2224950 ttttatttcatttgtgatattttttttgttttttcatagttaaagtgcgggtaatgggtgcgggtatgagcacttaggtacccat 2225034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 431
Target Start/End: Complemental strand, 25938484 - 25938426
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||| ||||||||||||| ||||  ||||| ||||||||||| ||||||||    
T  25938484 aattttatttcatttgtgatgttttttttgtttttttatagttaaagtgctggtaatgg 25938426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 429
Target Start/End: Original strand, 28928616 - 28928670
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaat 429  Q
    ||||||||||||||| |||||||||||||| ||| | ||||||||||||| ||||    
T  28928616 ttttatttcaattgtaatgtttttattgtcttttcatagttaaagtgcggataat 28928670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 29994400 - 29994330
Alignment:
Q  412 agttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    |||||||||||||||||||||| |||||| |  || |||||| |||||| ||||||| ||||| |||||||    
T  29994400 agttaaagtgcgggtaatggatgcaggtacggacatttaggtacccatagaatatggaaaagggcactaaa 29994330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 338 - 482
Target Start/End: Original strand, 31713589 - 31713735
Alignment:
Q  338 tattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtga--tgtttttattgtccttttacagttaaagtgcgggtaatggattc 435  Q
    |||||||||||||||||||||       ||| || | ||||||||||||||||   | ||||||||||| ||| | | ||||| |||||||||| | | |    
T  31713589 tattttatgagttgatttgaaattttttggatcatagttttatttcaattgtgggttttttttattgtcttttcataattaaaatgcgggtaataggtgc 31713688  T
Q  436 aggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
     ||||||  |||||||||||||||| | |||||  ||||||||||||    
T  31713689 gggtatggacacttaggtgcccatagagtatggagaaggacactaaa 31713735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 52802257 - 52802343
Alignment:
Q  375 ttttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    ||||||||||||||||||| ||||||||||| ||| | ||  |||||||||||||||| |   ||||||| |||||| |||||||||    
T  52802257 ttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccata 52802343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 53140729 - 53140643
Alignment:
Q  375 ttttatttcaattgtgatgt-ttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||||||||||||| |||||||||| ||| | ||  |||||||||||||||| |   ||||||| |||||| |||||||||    
T  53140729 ttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccata 53140643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 375 - 485
Target Start/End: Original strand, 39485126 - 39485238
Alignment:
Q  375 ttttatttcaattgtgatg--tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaa 472  Q
    |||||||||||||||||||  ||||||||||| ||||| | |||||||||||| ||||  | | | ||||  ||||||||||||   | | |||||| ||    
T  39485126 ttttatttcaattgtgatgtttttttattgtctttttataattaaagtgcgggcaatgtttacggatatgggcacttaggtgcctgcagagtatggggaa 39485225  T
Q  473 ggacactaaaatt 485  Q
    |||||||||||||    
T  39485226 ggacactaaaatt 39485238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 375 - 501
Target Start/End: Original strand, 56445154 - 56445281
Alignment:
Q  375 ttttatttcaattgtgatgttttt--attgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaa 472  Q
    |||||||||||||||| |||||||  ||| || ||| |  | ||||||||||||||||| | |  |||||  |||||| ||||||||||  |||||| ||    
T  56445154 ttttatttcaattgtggtgtttttttattatcttttcatggctaaagtgcgggtaatgggtgcgagtatgggcacttaagtgcccataaggtatggggaa 56445253  T
Q  473 ggacactaaaatttgttgcacacgaggat 501  Q
    ||||||| ||| ||||||| |||||||||    
T  56445254 ggacact-aaagttgttgcccacgaggat 56445281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 317 - 531
Target Start/End: Complemental strand, 22248037 - 22247822
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgt--ttttattgtccttttacagt 414  Q
    ||||||||| || || |||| |||||||| ||||||||| ||       ||| || | ||||||||||||||||||||  |||||||||| ||| | ||     
T  22248037 gctaaatactacaatttgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgtttttttattgtcttttcataga 22247938  T
Q  415 taaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgaggatacaattatttttt 514  Q
     ||||||||| |||||| | | ||||||| |||||| ||||| |||   |||||| |||| |||| ||| ||||||| ||| ||| |||    |||||||    
T  22247937 gaaagtgcggataatgggtgcgggtatgagcacttaagtgcctatagggtatggggaagggcact-aaagttgttgcccacaagggtacgtgcatttttt 22247839  T
Q  515 acaaatgcgggtgtggg 531  Q
    ||||||| |||| ||||    
T  22247838 acaaatgagggtatggg 22247822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 474
Target Start/End: Complemental strand, 41003440 - 41003338
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtcctttt---acagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaa 471  Q
    |||||||||| ||||||||||||| || |  ||||   | |||||||||||||||||||| | | ||||||| ||||||||| ||||||  ||||||| |    
T  41003440 ttttatttcatttgtgatgtttttttttttgttttttcatagttaaagtgcgggtaatgggtgcgggtatgagcacttaggtacccataggatatgggga 41003341  T
Q  472 agg 474  Q
    |||    
T  41003340 agg 41003338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 336 - 431
Target Start/End: Original strand, 50981907 - 50982004
Alignment:
Q  336 actattttatgagttgatttgaannnnnnnggaccaaaatttta-tttcaattgtgatgt-ttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||||||||||||||       |||||| | ||||| ||||||||||||| | ||| |||||| ||||| ||||||||||| ||||||||    
T  50981907 actattttatgagttgatttgaaaaatttgggaccatagttttattttcaattgtgatatatttgattgtctttttatagttaaagtgcaggtaatgg 50982004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 7250519 - 7250566
Alignment:
Q  380 tttcaattgtgatgtttttattgtccttttacagttaaagtgcgggta 427  Q
    ||||||||||||||||||||||||| ||| | ||||||||||| ||||    
T  7250519 tttcaattgtgatgtttttattgtcttttcatagttaaagtgcaggta 7250566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 21297276 - 21297331
Alignment:
Q  373 aattttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggta 427  Q
    ||||||||||||||| ||||| ||||||||||| ||| | ||||||||||||||||    
T  21297276 aattttatttcaattatgatgttttttattgtcttttcatagttaaagtgcgggta 21297331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 21245956 - 21245899
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggat 433  Q
    |||||||||| ||||||||||||| ||||||||| | |||||||||| || ||||||||    
T  21245956 ttttatttcatttgtgatgttttt-ttgtcctttcatagttaaagtgtggataatggat 21245899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 31786494 - 31786424
Alignment:
Q  412 agttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    ||||||| |||||||||||| | | |||||   ||||||||||||||||   |||||||||||||||||||    
T  31786494 agttaaaatgcgggtaatgggtgcgggtatagacacttaggtgcccatagggtatgggaaaggacactaaa 31786424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 453
Target Start/End: Complemental strand, 42755458 - 42755380
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggt 453  Q
    |||||||| | ||||||||||||| ||||  ||| | |||||||||||||||||||| | | ||||||  |||||||||    
T  42755458 ttttatttgatttgtgatgttttttttgttttttcatagttaaagtgcgggtaatgggtgcgggtatgtgcacttaggt 42755380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 11034794 - 11034690
Alignment:
Q  394 tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcac 493  Q
    ||||||||||| ||| | ||||||| ||||| |||||| | | ||||||  ||||||||||||||||   |||||| |||| |||| ||| ||||||| |    
T  11034794 tttttattgtcttttcagagttaaactgcggataatgggtgcgggtatgggcacttaggtgcccatagggtatggggaagggcact-aaagttgttgccc 11034696  T
Q  494 acgagg 499  Q
    ||||||    
T  11034695 acgagg 11034690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 52595662 - 52595577
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||| | ||||||||||||| ||||  ||| | |||||||||||||||||||| | | ||||||  |||||| || ||||||    
T  52595662 ttttattttacttgtgatgttttttttgttttttcatagttaaagtgcgggtaatgggtgcgggtatggacacttaagtacccata 52595577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 5e-21; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 375 - 503
Target Start/End: Original strand, 667971 - 668098
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||| ||||||||||| ||| | ||||||||||||| |||||| | | ||||||  ||||||||| ||||||  ||||||| ||||    
T  667971 ttttatttcaattgtgatatttttattgtcttttcatagttaaagtgcggataatgggtgcgggtatgggcacttaggtacccataggatatggggaagg 668070  T
Q  475 acactaaaatttgttgcacacgaggatac 503  Q
     |||| ||| ||||||| |||||||||||    
T  668071 gcact-aaagttgttgcccacgaggatac 668098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 431
Target Start/End: Complemental strand, 29155460 - 29155364
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||||||| |||| ||       |||||| | ||||||||||||||||||||||||| |||| ||| | ||||||||||||||||||||    
T  29155460 tactattttatgagttaatttaaaaaaaattggaccatagttttatttcaattgtgatgtttttaatgtcttttcatagttaaagtgcgggtaatgg 29155364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 431
Target Start/End: Original strand, 4592194 - 4592250
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||||||||| |||||||| || ||| | ||||||||||||||||||||    
T  4592194 ttttatttcaattgtgatatttttattttcttttcatagttaaagtgcgggtaatgg 4592250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 337 - 485
Target Start/End: Original strand, 16711305 - 16711453
Alignment:
Q  337 ctattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattca 436  Q
    |||||||| |||||||||||||       |||||| | ||||||||||||| |||||||||||||||| ||| | | |||||| |||| |||||| | |     
T  16711305 ctattttacgagttgatttgaaaactttgggaccatagttttatttcaattatgatgtttttattgtcttttcatatttaaagagcggataatgggtacg 16711404  T
Q  437 ggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatt 485  Q
    ||||||  |||||| |||| ||||   |||| | ||||||| |||||||    
T  16711405 ggtatgggcacttaagtgctcatagggtatgaggaaggacattaaaatt 16711453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 375 - 482
Target Start/End: Complemental strand, 20937149 - 20937043
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||||||||||||||| ||| | | |||||||| |||||||   | | ||||||  ||||||||| ||||| |  |||||| ||||    
T  20937149 ttttatttcaattgtgatgtttttattgtcttttcataattaaagtgtgggtaataagtgcgggtatggacacttaggtacccat-aggtatggggaagg 20937051  T
Q  475 acactaaa 482  Q
    ||||||||    
T  20937050 acactaaa 20937043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 317 - 456
Target Start/End: Original strand, 39767073 - 39767212
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagtt 415  Q
    ||||||||| ||||| | ||||||||||||||||| ||| ||       ||| || | |||||||||||||| ||| ||||| |||||  ||||| | ||    
T  39767073 gctaaatactacgatttctactattttatgagttgcttt-aaaaaaattggatcatagttttatttcaattgcgatattttttattgtatttttataatt 39767171  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcc 456  Q
    |||||| ||||||||| | ||||||||| ||||||||||||    
T  39767172 aaagtgtgggtaatgggtacaggtatgagcacttaggtgcc 39767212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 453
Target Start/End: Original strand, 31440636 - 31440714
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggt 453  Q
    |||||||||| ||||||||||||| ||||  ||| | |||||||||||||||||||| | | ||||||  |||||||||    
T  31440636 ttttatttcatttgtgatgttttttttgttttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggt 31440714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 313 - 430
Target Start/End: Complemental strand, 12757932 - 12757815
Alignment:
Q  313 ttttgctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttaca 412  Q
    ||||| ||||||| |||||   |||||||||||||| |||||||||         |||| | |||||||||| ||||||| ||||||||||| ||| | |    
T  12757932 ttttgttaaatactacgattcttactattttatgagctgatttgaaaaaaatttaaccatagttttatttcatttgtgatatttttattgtcttttcata 12757833  T
Q  413 gttaaagtgcgggtaatg 430  Q
     |||||||||||||||||    
T  12757832 attaaagtgcgggtaatg 12757815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 442
Target Start/End: Original strand, 13142572 - 13142639
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatg 442  Q
    |||||||||| ||||||||||||| ||||  ||  | |||||||||||||||||||||| | ||||||    
T  13142572 ttttatttcatttgtgatgttttttttgtttttccatagttaaagtgcgggtaatggatgcgggtatg 13142639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 532
Target Start/End: Complemental strand, 30241535 - 30241377
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaa 472  Q
    |||||||||| | |||||||||| || ||||  ||| | |||||||||||||||||||| | |  |||||  ||||||||| ||||||   |||||  ||    
T  30241535 aattttattttatttgtgatgttctttttgttttttcatagttaaagtgcgggtaatgggtgcgagtatgggcacttaggtacccatagggtatggagaa 30241436  T
Q  473 ggacactaaaatttgttgcacacgaggatacaattattttttacaaatgcgggtgtggga 532  Q
    ||| ||| ||| |||||||  |||||||| |   ||||||||| |||||||||| |||||    
T  30241435 ggagact-aaagttgttgccgacgaggatccgggtattttttataaatgcgggtatggga 30241377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 317 - 499
Target Start/End: Complemental strand, 2656961 - 2656779
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg-tttttattgtccttttacagtt 415  Q
    ||||||||| |||||   ||||||||||| ||||||||||||       ||| || ||||||||||||||| || || ||||||||||| ||| |  |||    
T  2656961 gctaaatactacgattcatactattttattagttgatttgaaattttttggatcataattttatttcaattatggtgttttttattgtcttttgatggtt 2656862  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    ||||||| |||||||  |   ||||||  |||||| || ||||||   |||||| ||||||||| ||| ||||||| |||||||    
T  2656861 aaagtgcaggtaatgtgtgtgggtatggacacttaagtacccatagggtatggggaaggacact-aaagttgttgcccacgagg 2656779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 4289745 - 4289659
Alignment:
Q  375 ttttatttcaattgtgatgttttt-attgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||||||||||| ||||| |||||| ||| | ||  |||||||||||||||| |   ||||||| |||||| |||||||||    
T  4289745 ttttatttcaattgtgatattttttattgtcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccata 4289659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 8753989 - 8753843
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggat 433  Q
    ||||||||||| ||||||||||||       ||| || |||||||||||||||||| || ||||||||||| ||| |  |||| ||||||| |||||  |    
T  8753989 tactattttattagttgatttgaaattttgcggatcataattttatttcaattgtggtgttttttattgtcttttcatggttatagtgcggataatgact 8753890  T
Q  434 tcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaa 481  Q
     |||||||   |||||| || ||||||  ||||||| |||||||||||    
T  8753889 gcaggtatagacacttaagtacccatatgatatggg-aaggacactaa 8753843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 29546115 - 29546181
Alignment:
Q  394 tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    ||||||||||| ||| | ||||||| |||||||||||| | | ||||||  ||||||||||||||||    
T  29546115 tttttattgtcttttcatagttaaaatgcgggtaatgggtgcgggtatggacacttaggtgcccata 29546181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 40507630 - 40507700
Alignment:
Q  374 attttatttcaattgtgatgtttt-tattgtccttttacagttaaagtgcgggtaatggattcaggtatga 443  Q
    ||||||||||||||||||| |||| ||||||| ||||| | ||||||||| | |||||||| | |||||||    
T  40507630 attttatttcaattgtgatattttttattgtctttttataattaaagtgcagataatggatacgggtatga 40507700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 400
Target Start/End: Original strand, 15150219 - 15150252
Alignment:
Q  367 gaccaaaattttatttcaattgtgatgtttttat 400  Q
    ||||| ||||||||||||||||||||||||||||    
T  15150219 gaccataattttatttcaattgtgatgtttttat 15150252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 41935544 - 41935648
Alignment:
Q  394 tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcac 493  Q
    ||||||||||| ||| | | ||||| || ||||||||| | | ||||||| ||||||||||||||||   |||| | ||||||||| ||| ||||||| |    
T  41935544 tttttattgtcttttcagaattaaactgtgggtaatgggtgcgggtatgagcacttaggtgcccatagggtatgaggaaggacact-aaagttgttgccc 41935642  T
Q  494 acgagg 499  Q
    ||||||    
T  41935643 acgagg 41935648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 9e-20; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 317 - 499
Target Start/End: Complemental strand, 20216374 - 20216192
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagtt 415  Q
    ||||||||| |||||  |||||||||||| ||||||||| ||       ||| || | |||||||||||||||||||||||| |||||| ||| | ||      
T  20216374 gctaaatactacgattcgtactattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagag 20216275  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    ||||||||||||| || | ||||||||  |||||| |||||||||| ||||||| |||| |||| ||| ||||||| |||||||    
T  20216274 aaagtgcgggtaacgggtgcaggtatgggcacttaagtgcccataagatatggggaagggcact-aaagttgttgcccacgagg 20216192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 317 - 499
Target Start/End: Complemental strand, 20235972 - 20235790
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagtt 415  Q
    ||||||||| |||||  |||||||||||| ||||||||| ||       ||| || | |||||||||||||||||||||||| |||||| ||| | ||      
T  20235972 gctaaatactacgattcgtactattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagag 20235873  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    ||||||||||||| || | ||||||||  |||||| |||||||||| ||||||| |||| |||| ||| ||||||| |||||||    
T  20235872 aaagtgcgggtaacgggtgcaggtatgggcacttaagtgcccataagatatggggaagggcact-aaagttgttgcccacgagg 20235790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 6109730 - 6109645
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||| | | ||||||| ||||||||| ||||||    
T  6109730 ttttatttcaattgtgatatttttattgtcttttcatagttaaagtgcgggtaatgggtgcgggtatgagcacttaggtacccata 6109645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 2620961 - 2621046
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    ||||||||||||||||||||||||||| || ||| | |||||||||||||||||||| | ||||||||  ||||||| | ||||||    
T  2620961 ttttatttcaattgtgatgtttttattatcttttcatagttaaagtgcgggtaatgggtgcaggtatgggcacttagatacccata 2621046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 375 - 474
Target Start/End: Complemental strand, 25500254 - 25500155
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||||||||||||||||||||||||||||| ||| | | ||||||||| |||||||| | | ||||||  ||||||||| |||||||  |||||| ||||    
T  25500254 ttttatttcaattgtgatgtttttattgtcttttcatatttaaagtgcaggtaatgggtgcgggtatgggcacttaggtacccataaggtatggggaagg 25500155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 317 - 499
Target Start/End: Complemental strand, 859669 - 859487
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttatt-gtccttttacagtt 415  Q
    ||||||||| |||||   || |||||||| ||||||||||||       ||| || | |||||||||||||||| | ||||| || ||| ||| | ||||    
T  859669 gctaaatactacgattcatattattttataagttgatttgaaattttttggatcatagttttatttcaattgtggtttttttttttgtcttttcatagtt 859570  T
Q  416 aaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    ||| |||||||||||| | | ||||||| ||||||||||||||||   |||||| ||||||||| ||| ||||||| |||||||    
T  859569 aaaatgcgggtaatgggtgcgggtatgagcacttaggtgcccatagggtatggggaaggacact-aaagttgttgcccacgagg 859487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 317 - 499
Target Start/End: Complemental strand, 222151 - 221968
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttatt--gtccttttacagt 414  Q
    ||||||||| |||||   || |||||||| ||||||||||||       ||| || | |||||||||||||||| | ||||| ||  ||| ||| | |||    
T  222151 gctaaatactacgattcatattattttataagttgatttgaaattttttggatcatagttttatttcaattgtggttttttttttttgtcttttcatagt 222052  T
Q  415 taaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    |||| |||||||||||| | | ||||||| ||||||||||||||||   |||||| ||||||||| ||| ||||||| |||||||    
T  222051 taaaatgcgggtaatgggtgcgggtatgagcacttaggtgcccatagggtatggggaaggacact-aaagttgttgcccacgagg 221968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 317 - 499
Target Start/End: Complemental strand, 691306 - 691123
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttatt--gtccttttacagt 414  Q
    ||||||||| |||||   || |||||||| ||||||||||||       ||| || | |||||||||||||||| | ||||| ||  ||| ||| | |||    
T  691306 gctaaatactacgattcatattattttataagttgatttgaaattttttggatcatagttttatttcaattgtggttttttttttttgtcttttcatagt 691207  T
Q  415 taaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    |||| |||||||||||| | | ||||||| ||||||||||||||||   |||||| ||||||||| ||| ||||||| |||||||    
T  691206 taaaatgcgggtaatgggtgcgggtatgagcacttaggtgcccatagggtatggggaaggacact-aaagttgttgcccacgagg 691123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 317 - 499
Target Start/End: Complemental strand, 735774 - 735591
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttatt--gtccttttacagt 414  Q
    ||||||||| |||||   || |||||||| ||||||||||||       ||| || | |||||||||||||||| | ||||| ||  ||| ||| | |||    
T  735774 gctaaatactacgattcatattattttataagttgatttgaaattttttggatcatagttttatttcaattgtggttttttttttttgtcttttcatagt 735675  T
Q  415 taaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    |||| |||||||||||| | | ||||||| ||||||||||||||||   |||||| ||||||||| ||| ||||||| |||||||    
T  735674 taaaatgcgggtaatgggtgcgggtatgagcacttaggtgcccatagggtatggggaaggacact-aaagttgttgcccacgagg 735591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 431
Target Start/End: Original strand, 19643514 - 19643570
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||| ||||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  19643514 ttttttttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtaatgg 19643570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 431
Target Start/End: Original strand, 24891418 - 24891474
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||||||||| ||||||||||| ||| | ||||||||||||||||||||    
T  24891418 ttttatttcaattgtgatatttttattgtcttttcatagttaaagtgcgggtaatgg 24891474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 313 - 430
Target Start/End: Complemental strand, 43239352 - 43239235
Alignment:
Q  313 ttttgctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttaca 412  Q
    ||||| |||||||||| ||  |||||||||||||||||| ||||||       | |||| ||||||| |||||||||||| |||||||| || ||| | |    
T  43239352 ttttgttaaataccacaattcgtactattttatgagttggtttgaaattttctgaaccataattttagttcaattgtgatatttttattatcttttcata 43239253  T
Q  413 gttaaagtgcgggtaatg 430  Q
    |||||||||| |||||||    
T  43239252 gttaaagtgcaggtaatg 43239235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 318 - 431
Target Start/End: Original strand, 26561173 - 26561284
Alignment:
Q  318 ctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaa 417  Q
    |||||||  ||||| |||||||||||||||||| |||| ||       |||||| | |||||| ||||||||||||||||||||||| ||| | ||||||    
T  26561173 ctaaatattacgatttgtactattttatgagttaatttaaaaaatt--ggaccatagttttatatcaattgtgatgtttttattgtcttttcatagttaa 26561270  T
Q  418 agtgcgggtaatgg 431  Q
    |||||| |||||||    
T  26561271 agtgcgtgtaatgg 26561284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 335 - 431
Target Start/End: Complemental strand, 43511340 - 43511244
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    ||||||||||||||||||||||||       | |||| ||||||||||||||||| || ||||||||||| ||| | ||||||||||| | ||||||    
T  43511340 tactattttatgagttgatttgaaaaaatttgaaccataattttatttcaattgttatatttttattgtcttttcatagttaaagtgcagataatgg 43511244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 482
Target Start/End: Complemental strand, 7580203 - 7580058
Alignment:
Q  336 actattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg--tttttattgtccttttacagttaaagtgcgggtaatggat 433  Q
    |||||||||||||||||||||||       ||| || | |||||||||||||||||||  ||||||||||| ||| | |||||   |||||||||||| |    
T  7580203 actattttatgagttgatttgaaattttttggatcatatttttatttcaattgtgatgcttttttattgtcttttcatagtta---tgcgggtaatgggt 7580107  T
Q  434 tcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
     | ||||||  ||||||||||||||||   |||||| |||| |||||||    
T  7580106 gcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaa 7580058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 2472281 - 2472366
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||| ||||||||||||||||||||| ||| | ||||||||| ||||| |||||| | ||||||  |||||| || ||||||    
T  2472281 ttttattttaattgtgatgtttttattgtcttttaatagttaaagtacgggttatggatgcgggtatgggcacttatgtacccata 2472366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 375 - 467
Target Start/End: Original strand, 15961671 - 15961764
Alignment:
Q  375 ttttatttcaattgtgatgtttt-tattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatg 467  Q
    |||||||| |||||||||||||| ||||||| ||||| | ||||| |||||||||||| | || |||||  ||| |||||||||||| ||||||    
T  15961671 ttttattttaattgtgatgttttttattgtctttttataattaaaatgcgggtaatgggtacatgtatgggcacgtaggtgcccatagaatatg 15961764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 375 - 519
Target Start/End: Complemental strand, 15542244 - 15542100
Alignment:
Q  375 ttttatttcaattgtgatgttttt--attgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaa 472  Q
    |||||||| |||||||||||||||  |||| | ||||| | ||||||||| |||||||| |   ||||||  ||||||||||||||||| ||||| | ||    
T  15542244 ttttattttaattgtgatgtttttttattgcctttttataattaaagtgcaggtaatgggtatgggtatgggcacttaggtgcccataagatatgag-aa 15542146  T
Q  473 ggacactaaaatttgttgcacacgaggatacaattattttttacaaa 519  Q
    ||||||| ||| ||||| | || |||| |||||  ||||||||||||    
T  15542145 ggacact-aaagttgttacccatgagggtacaaacattttttacaaa 15542100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 482
Target Start/End: Complemental strand, 38020198 - 38020049
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg--tttttattgtccttttacagttaaagtgcgggtaatgga 432  Q
    ||||||||||||||||||||||||       |||  | | || ||||||| ||||| ||  ||||||||||| ||| | ||||||| ||||||||||||     
T  38020198 tactattttatgagttgatttgaaattttctggataatagttgtatttcagttgtggtgcttttttattgtcttttcagagttaaactgcgggtaatggg 38020099  T
Q  433 ttcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
    | | ||||||  ||||||||||||||||   |||||| |||| |||||||    
T  38020098 tgcgggtatggacacttaggtgcccatagggtatggggaagggcactaaa 38020049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 431
Target Start/End: Complemental strand, 25419375 - 25419319
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    ||||||||||| ||||||||||||||| || ||| | ||||||||||| ||||||||    
T  25419375 ttttatttcaactgtgatgtttttattttcttttcatagttaaagtgcaggtaatgg 25419319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 482
Target Start/End: Original strand, 37226772 - 37226880
Alignment:
Q  375 ttttatttcaattgtgatgtttt-tattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaag 473  Q
    |||||||||||| |||||||||| ||||||| ||||  | ||||||||||| |||| ||| |  |||||  ||||||||||||||||   |||||| ||     
T  37226772 ttttatttcaatcgtgatgttttttattgtctttttgtaattaaagtgcggataatagatacgagtatgggcacttaggtgcccatagggtatggggaat 37226871  T
Q  474 gacactaaa 482  Q
    |||||||||    
T  37226872 gacactaaa 37226880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 450
Target Start/End: Complemental strand, 45553175 - 45553100
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccactta 450  Q
    ||||||||||||||||||||| || ||||| ||| | ||||||| ||| |||||||||| | ||||| | ||||||    
T  45553175 ttttatttcaattgtgatgttctttttgtcttttcatagttaaaatgcaggtaatggatgcgggtataagcactta 45553100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 378 - 460
Target Start/End: Complemental strand, 30801352 - 30801271
Alignment:
Q  378 tatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||||||||||||| |||||| ||| | ||||||||||  |||||||| | | ||||||  ||||||||| ||||||    
T  30801352 tatttcaattgtgatgttttcattgtcttttcatagttaaagtg-tggtaatgggtacgggtatggacacttaggtacccata 30801271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 334 - 485
Target Start/End: Complemental strand, 250309 - 250156
Alignment:
Q  334 gtactattttatgagttgatttgaannnnnnnggaccaaaattttattt-caattgtgatgt-ttttattgtccttttacagttaaagtgcgggtaatgg 431  Q
    |||||||||||||||||||||| ||       |||||| |||||||||| |||||||||| | |||||||||| ||| | ||||||||||||| ||||||    
T  250309 gtactattttatgagttgatttaaaaattttgggaccataattttattttcaattgtgatatattttattgtcttttgatagttaaagtgcggataatgg 250210  T
Q  432 attcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatt 485  Q
     | || ||||||  ||||||  ||||||||  |||||| |||||||||||||||    
T  250209 gtacatgtatgagtacttagacgcccataaggtatggggaaggacactaaaatt 250156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 225 - 316
Target Start/End: Complemental strand, 11078 - 10987
Alignment:
Q  225 ccaaggcaccactttggattccacctccactcgtagaacaaacaaggttgaattttcagcctagctaaactccaactccacgacaacctttt 316  Q
    |||||| |||||||  ||||||||| ||| || ||||||||||| ||||||||||||||||| | |||||||||| ||||||| ||||||||    
T  11078 ccaagggaccacttcagattccaccgccattcatagaacaaacacggttgaattttcagcctcgataaactccaaatccacgataacctttt 10987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 5e-18; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 367 - 430
Target Start/End: Complemental strand, 12429546 - 12429483
Alignment:
Q  367 gaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatg 430  Q
    ||||| |||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  12429546 gaccataattttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtaatg 12429483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 576
Target Start/End: Complemental strand, 6938156 - 6937958
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaagg 474  Q
    |||| ||||||||||||||||||||||||| ||| | |||||||||||||||   || | | ||||||  ||||||||| ||||||   |||||| ||||    
T  6938156 ttttgtttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggt---gggtgcgggtatgggcacttaggtacccatagggtatggggaagg 6938060  T
Q  475 acactaaaatttgttgcacacgaggatacaattattttttacaaatgcgggtgtgggatagggcggtgta-taccctgcccatagagttaccattgccat 573  Q
     ||||||| || ||||| |||| || |||   || ||||||||||||||||| ||||   ||||  |||| |||||| ||||||| ||  ||||||||||    
T  6938059 gcactaaagtt-gttgcccacgggggtacgggtaatttttacaaatgcgggtatggggatgggcattgtagtaccctacccatagggtacccattgccat 6937961  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 24447119 - 24447205
Alignment:
Q  375 ttttatttcaattgtgatg-tttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    ||||||||||||||||||| ||||||||||| ||| | ||  |||||||||||||||| |   ||||||| |||||| |||||||||    
T  24447119 ttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccata 24447205  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 28770002 - 28769886
Alignment:
Q  366 ggaccaaaattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaata 465  Q
    |||||| | ||||||||||||||| || ||||||||    ||| | || ||||||||||||||||| | | ||||||  ||||||||| ||||||  |||    
T  28770002 ggaccatagttttatttcaattgtaatttttttattcctttttcatagctaaagtgcgggtaatgggtgcgggtatggacacttaggtacccataggata 28769903  T
Q  466 tgggaaaggacactaaa 482  Q
    |||| || |||||||||    
T  28769902 tggggaatgacactaaa 28769886  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 1221708 - 1221794
Alignment:
Q  375 ttttatttcaattgtgatgtttt-tattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||||||||||| |||| ||||||| ||| | ||  |||||||||||||||| |   ||||||| |||||| |||||||||    
T  1221708 ttttatttcaattgtgatattttttattgtcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccata 1221794  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 335 - 499
Target Start/End: Original strand, 6337889 - 6338054
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg--tttttattgtccttttacagttaaagtgcgggtaatgga 432  Q
    ||||||||||||||||||||||||       ||| || |||| ||||||| ||||| ||  ||||||||||| ||| |   ||||| |||||||||| |     
T  6337889 tactattttatgagttgatttgaaattttctggatcataattgtatttcagttgtggtgcttttttattgtcttttcagtattaaactgcgggtaattgg 6337988  T
Q  433 ttcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaaatttgttgcacacgagg 499  Q
    | | ||||||| | ||||||||||||||   |||||| |||| |||| ||| ||||||| |||||||    
T  6337989 tgcgggtatgagctcttaggtgcccatagggtatggggaagggcact-aaagttgttgcccacgagg 6338054  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 375 - 460
Target Start/End: Original strand, 20691583 - 20691669
Alignment:
Q  375 ttttatttcaattgtgatgtttttatt-gtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||| ||||||||||||| || ||  ||| | |||||||||||||||||||| | | ||||||  ||||||||| ||||||    
T  20691583 ttttatttcatttgtgatgtttttttttgttttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggtacccata 20691669  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 31070910 - 31070826
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccata 460  Q
    |||||||||| || |||||||||| ||||  ||| | |||||||||||||||||||| | | ||||||  ||||||||| ||||||    
T  31070910 ttttatttcatttatgatgttttt-ttgttttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggtacccata 31070826  T

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Target: scaffold0005 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 504
Target Start/End: Original strand, 221960 - 222089
Alignment:
Q  375 ttttatttcaattgtgatgtttt-tattgtccttttacagttaaagtgcgggtaatggattcaggtatgaccacttaggtgcccataaaatatgggaaag 473  Q
    |||||||||||| ||||| |||| ||||||| ||||| | |||||||||||||||||||| | ||||||| |||||||||| ||||||  |||||  ||     
T  221960 ttttatttcaatggtgatattttttattgtcgttttataattaaagtgcgggtaatggatacgggtatgagcacttaggtgtccataaggtatggagaat 222059  T
Q  474 gacactaaaatttgttgcacacgaggataca 504  Q
    |||||| ||| ||||| | ||||||||||||    
T  222060 gacact-aaagttgttacccacgaggataca 222089  T

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Target: scaffold0312 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 375 - 442
Target Start/End: Original strand, 5871 - 5938
Alignment:
Q  375 ttttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaatggattcaggtatg 442  Q
    |||||||||| ||||||||||||||||||| ||| | |||||||||| ||||||||| | ||||||||    
T  5871 ttttatttcatttgtgatgtttttattgtcttttcatagttaaagtgtgggtaatgggtgcaggtatg 5938  T

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Target: scaffold0249 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 335 - 482
Target Start/End: Complemental strand, 20182 - 20034
Alignment:
Q  335 tactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatgttttt-attgtccttttacagttaaagtgcgggtaatggat 433  Q
    ||||||||||| ||||||||| ||       ||| || ||||||||||||||||||| |||||| |||||| ||| |  |||||| |||||||||||| |    
T  20182 tactattttattagttgatttaaaattttttggatcataattttatttcaattgtgacgtttttaattgtcttttcatggttaaaatgcgggtaatgggt 20083  T
Q  434 tcaggtatgaccacttaggtgcccataaaatatgggaaaggacactaaa 482  Q
     | ||||||  |||||| ||  |||||| ||||||| |||| |||||||    
T  20082 gcgggtatggacacttaagtatccataagatatggggaagggcactaaa 20034  T

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Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 373 - 428
Target Start/End: Original strand, 72592 - 72646
Alignment:
Q  373 aattttatttcaattgtgatgtttttattgtccttttacagttaaagtgcgggtaa 428  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||| ||||||||    
T  72592 aattttatttcaattgtgatgtttttattgt-ctttcatagttaaagcgcgggtaa 72646  T

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Target: scaffold0242 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 317 - 427
Target Start/End: Original strand, 13026 - 13137
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg-tttttattgtccttttacagtt 415  Q
    ||||||||| ||||  | ||||||||||| ||||||||||||       ||| || |||||||||||||||||  || ||||||||||| ||| |  |||    
T  13026 gctaaatactacgacttatactattttattagttgatttgaaattttttggatcataattttatttcaattgtagtgttttttattgtcttttcatggtt 13125  T
Q  416 aaagtgcgggta 427  Q
    ||||||||||||    
T  13126 aaagtgcgggta 13137  T

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Target: scaffold0242; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 317 - 427
Target Start/End: Original strand, 21861 - 21972
Alignment:
Q  317 gctaaataccacgatgtgtactattttatgagttgatttgaannnnnnnggaccaaaattttatttcaattgtgatg-tttttattgtccttttacagtt 415  Q
    ||||||||| ||||  | ||||||||||| ||||||||||||       ||| || |||||||||||||||||  || ||||||||||| ||| |  |||    
T  21861 gctaaatactacgacttatactattttattagttgatttgaaattttttggatcataattttatttcaattgtagtgttttttattgtcttttcatggtt 21960  T
Q  416 aaagtgcgggta 427  Q
    ||||||||||||    
T  21961 aaagtgcgggta 21972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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