View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19857_low_9 (Length: 533)

Name: NF19857_low_9
Description: NF19857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19857_low_9
NF19857_low_9
[»] chr3 (51 HSPs)
chr3 (178-518)||(50210546-50210886)
chr3 (11-185)||(50211773-50211947)
chr3 (78-157)||(31403425-31403504)
chr3 (72-146)||(44295604-44295678)
chr3 (72-153)||(44014717-44014798)
chr3 (96-153)||(47132064-47132121)
chr3 (72-165)||(25182909-25182999)
chr3 (72-129)||(21872214-21872271)
chr3 (84-157)||(22667469-22667542)
chr3 (84-157)||(22724108-22724181)
chr3 (71-214)||(36646300-36646444)
chr3 (98-153)||(1810047-1810102)
chr3 (84-214)||(37273142-37273273)
chr3 (72-146)||(2413598-2413672)
chr3 (74-152)||(24158437-24158515)
chr3 (80-142)||(25925810-25925872)
chr3 (77-151)||(41644369-41644443)
chr3 (96-150)||(47584523-47584577)
chr3 (108-153)||(2175804-2175849)
chr3 (84-153)||(2304202-2304271)
chr3 (72-153)||(11253571-11253652)
chr3 (122-155)||(28828910-28828943)
chr3 (72-153)||(30573834-30573914)
chr3 (85-153)||(19679260-19679328)
chr3 (72-152)||(24785332-24785412)
chr3 (70-142)||(45590732-45590804)
chr3 (71-110)||(8007584-8007623)
chr3 (94-153)||(24624280-24624339)
chr3 (78-153)||(24625267-24625342)
chr3 (74-153)||(49465586-49465665)
chr3 (72-158)||(4534294-4534380)
chr3 (87-141)||(11041160-11041214)
chr3 (74-152)||(37795667-37795744)
chr3 (112-197)||(47513678-47513764)
chr3 (72-146)||(50760668-50760742)
chr3 (73-197)||(24281072-24281197)
chr3 (70-103)||(24684739-24684772)
chr3 (72-149)||(32663712-32663789)
chr3 (106-151)||(34707449-34707494)
chr3 (72-153)||(39980800-39980880)
chr3 (72-117)||(40240740-40240785)
chr3 (120-157)||(45535187-45535224)
chr3 (72-153)||(45541641-45541722)
chr3 (72-153)||(49845459-49845540)
chr3 (72-165)||(52323813-52323906)
chr3 (85-153)||(9995935-9996002)
chr3 (85-153)||(10216952-10217019)
chr3 (74-165)||(20173811-20173900)
chr3 (72-144)||(35903086-35903158)
chr3 (85-153)||(41724282-41724350)
chr3 (78-122)||(41848641-41848685)
[»] chr8 (41 HSPs)
chr8 (72-195)||(9700028-9700152)
chr8 (72-157)||(2487927-2488012)
chr8 (79-165)||(7853437-7853523)
chr8 (83-152)||(4511099-4511168)
chr8 (72-153)||(16162830-16162911)
chr8 (72-154)||(6526171-6526253)
chr8 (72-153)||(26479855-26479936)
chr8 (72-153)||(43368619-43368700)
chr8 (73-157)||(4560568-4560652)
chr8 (85-153)||(7918713-7918781)
chr8 (74-157)||(1821895-1821978)
chr8 (74-157)||(1856340-1856423)
chr8 (71-118)||(18331819-18331866)
chr8 (72-150)||(2482936-2483014)
chr8 (83-153)||(35534543-35534612)
chr8 (84-145)||(11376781-11376842)
chr8 (72-153)||(34770938-34771019)
chr8 (72-116)||(35928649-35928693)
chr8 (78-133)||(3634609-3634664)
chr8 (70-153)||(8060739-8060821)
chr8 (71-134)||(14926900-14926963)
chr8 (71-118)||(33553345-33553392)
chr8 (107-154)||(33940087-33940134)
chr8 (72-151)||(34849176-34849255)
chr8 (115-197)||(30918138-30918220)
chr8 (85-147)||(31884872-31884934)
chr8 (72-118)||(32976478-32976524)
chr8 (72-149)||(778463-778540)
chr8 (84-153)||(29417542-29417611)
chr8 (84-153)||(30191072-30191141)
chr8 (92-157)||(39049338-39049403)
chr8 (72-157)||(43045644-43045728)
chr8 (74-147)||(43717855-43717927)
chr8 (72-145)||(44236742-44236815)
chr8 (129-157)||(10114556-10114584)
chr8 (64-124)||(10488562-10488622)
chr8 (87-147)||(24326107-24326167)
chr8 (93-157)||(28763435-28763498)
chr8 (95-147)||(38436040-38436092)
chr8 (85-157)||(41589653-41589724)
chr8 (84-152)||(43504822-43504890)
[»] chr2 (55 HSPs)
chr2 (71-158)||(19978012-19978099)
chr2 (72-161)||(22878160-22878249)
chr2 (72-152)||(31982370-31982450)
chr2 (72-153)||(3973612-3973693)
chr2 (72-153)||(8017504-8017585)
chr2 (72-149)||(13866952-13867029)
chr2 (70-153)||(4350760-4350843)
chr2 (72-214)||(12313092-12313235)
chr2 (74-153)||(28803451-28803530)
chr2 (71-153)||(36677722-36677805)
chr2 (72-153)||(27317450-27317530)
chr2 (76-153)||(39622021-39622098)
chr2 (72-145)||(41170688-41170761)
chr2 (83-214)||(43141879-43142012)
chr2 (73-150)||(43456627-43456704)
chr2 (71-147)||(11513972-11514048)
chr2 (95-142)||(13869050-13869097)
chr2 (76-147)||(17775389-17775460)
chr2 (67-197)||(28677573-28677704)
chr2 (84-185)||(25609833-25609935)
chr2 (71-145)||(30331830-30331903)
chr2 (72-153)||(2964728-2964809)
chr2 (72-153)||(4606996-4607076)
chr2 (72-141)||(6547971-6548040)
chr2 (88-133)||(24098190-24098235)
chr2 (72-153)||(40077430-40077511)
chr2 (74-214)||(40158726-40158867)
chr2 (76-153)||(40776020-40776097)
chr2 (78-197)||(9478324-9478444)
chr2 (74-153)||(24347792-24347872)
chr2 (85-145)||(29430836-29430896)
chr2 (67-194)||(32821837-32821965)
chr2 (76-160)||(33981186-33981270)
chr2 (113-153)||(43808628-43808668)
chr2 (72-111)||(18179061-18179100)
chr2 (72-115)||(30990358-30990401)
chr2 (84-147)||(43530042-43530105)
chr2 (71-153)||(787402-787484)
chr2 (67-153)||(15120253-15120339)
chr2 (107-157)||(32837389-32837439)
chr2 (71-153)||(43811180-43811262)
chr2 (115-144)||(1625980-1626009)
chr2 (72-129)||(3078527-3078584)
chr2 (72-128)||(4326315-4326374)
chr2 (72-165)||(9478015-9478108)
chr2 (72-153)||(9996808-9996889)
chr2 (72-129)||(15370242-15370299)
chr2 (84-165)||(15377824-15377904)
chr2 (120-157)||(19629427-19629464)
chr2 (120-157)||(19826328-19826365)
chr2 (72-129)||(37276838-37276895)
chr2 (72-152)||(38076992-38077072)
chr2 (72-124)||(40759259-40759311)
chr2 (131-214)||(43065428-43065512)
chr2 (105-153)||(44606062-44606110)
[»] chr6 (43 HSPs)
chr6 (72-197)||(2460070-2460196)
chr6 (95-197)||(10031757-10031860)
chr6 (72-145)||(32205932-32206005)
chr6 (71-152)||(35070385-35070466)
chr6 (72-152)||(33089577-33089657)
chr6 (74-153)||(26559160-26559239)
chr6 (72-129)||(4325224-4325281)
chr6 (72-152)||(34538137-34538217)
chr6 (71-134)||(1432228-1432291)
chr6 (72-214)||(32171302-32171445)
chr6 (72-194)||(34403883-34404006)
chr6 (83-153)||(3180999-3181069)
chr6 (115-153)||(20368142-20368180)
chr6 (72-158)||(28005475-28005561)
chr6 (72-149)||(19752725-19752802)
chr6 (72-141)||(30536884-30536953)
chr6 (85-153)||(2455330-2455397)
chr6 (83-194)||(30523965-30524077)
chr6 (95-147)||(34544086-34544138)
chr6 (74-209)||(34939526-34939662)
chr6 (106-153)||(1669751-1669798)
chr6 (78-157)||(8146991-8147070)
chr6 (74-117)||(12111073-12111116)
chr6 (106-153)||(27693392-27693439)
chr6 (83-157)||(8348292-8348366)
chr6 (97-147)||(10353705-10353755)
chr6 (84-153)||(725586-725655)
chr6 (72-129)||(2457035-2457092)
chr6 (84-153)||(4080986-4081055)
chr6 (64-153)||(7945796-7945884)
chr6 (120-153)||(9559505-9559538)
chr6 (72-153)||(22743551-22743631)
chr6 (72-165)||(27924522-27924615)
chr6 (77-153)||(31338046-31338123)
chr6 (72-141)||(33068521-33068590)
chr6 (72-153)||(33737640-33737721)
chr6 (71-147)||(2458880-2458956)
chr6 (72-144)||(7901750-7901822)
chr6 (115-151)||(10645346-10645382)
chr6 (126-158)||(18611139-18611171)
chr6 (74-122)||(24973948-24973996)
chr6 (85-153)||(27857428-27857496)
chr6 (106-150)||(31668430-31668474)
[»] chr4 (51 HSPs)
chr4 (72-197)||(27123271-27123397)
chr4 (71-209)||(56186816-56186958)
chr4 (83-195)||(33534099-33534212)
chr4 (86-214)||(18628486-18628605)
chr4 (70-194)||(6428046-6428171)
chr4 (72-153)||(17822784-17822864)
chr4 (72-149)||(53315400-53315477)
chr4 (85-153)||(4691918-4691986)
chr4 (71-214)||(14011242-14011386)
chr4 (63-147)||(28615411-28615494)
chr4 (71-151)||(32421172-32421252)
chr4 (72-152)||(49940086-49940165)
chr4 (78-153)||(2996643-2996718)
chr4 (67-146)||(9720568-9720647)
chr4 (96-147)||(22471350-22471401)
chr4 (167-242)||(53943586-53943661)
chr4 (72-130)||(18512434-18512492)
chr4 (71-157)||(37575854-37575940)
chr4 (84-145)||(3549486-3549547)
chr4 (79-139)||(21469848-21469909)
chr4 (72-153)||(47399555-47399636)
chr4 (72-145)||(55870261-55870334)
chr4 (85-153)||(4071948-4072016)
chr4 (72-153)||(22662170-22662247)
chr4 (72-153)||(22666649-22666726)
chr4 (74-209)||(29375917-29376052)
chr4 (73-157)||(32831438-32831522)
chr4 (85-129)||(50298609-50298653)
chr4 (107-147)||(50742790-50742830)
chr4 (74-158)||(50746040-50746124)
chr4 (75-197)||(10365796-10365923)
chr4 (78-153)||(24091533-24091608)
chr4 (71-146)||(39178184-39178259)
chr4 (75-142)||(46859999-46860066)
chr4 (83-153)||(27725284-27725354)
chr4 (74-124)||(32420979-32421029)
chr4 (92-158)||(37863893-37863959)
chr4 (84-154)||(49003973-49004042)
chr4 (131-195)||(1137739-1137804)
chr4 (72-153)||(13126495-13126575)
chr4 (72-129)||(17975256-17975313)
chr4 (84-129)||(21157862-21157907)
chr4 (76-153)||(24087406-24087483)
chr4 (74-147)||(24160450-24160523)
chr4 (121-158)||(45214436-45214473)
chr4 (84-145)||(49939882-49939942)
chr4 (92-153)||(51560228-51560289)
chr4 (85-145)||(1554940-1555000)
chr4 (78-122)||(25487482-25487526)
chr4 (71-147)||(27122082-27122158)
chr4 (74-134)||(37636107-37636167)
[»] chr1 (44 HSPs)
chr1 (75-195)||(10199330-10199451)
chr1 (73-149)||(6659754-6659830)
chr1 (71-152)||(50644173-50644253)
chr1 (74-153)||(4757408-4757487)
chr1 (74-153)||(18327067-18327146)
chr1 (72-147)||(32515360-32515435)
chr1 (74-153)||(51929383-51929462)
chr1 (83-152)||(16980874-16980943)
chr1 (74-129)||(9602575-9602630)
chr1 (74-153)||(15581324-15581403)
chr1 (72-214)||(33723301-33723444)
chr1 (70-116)||(6292599-6292645)
chr1 (83-145)||(6557051-6557112)
chr1 (83-153)||(28075774-28075844)
chr1 (84-150)||(31517671-31517737)
chr1 (72-153)||(601110-601191)
chr1 (78-154)||(4200303-4200379)
chr1 (85-157)||(14737658-14737730)
chr1 (73-153)||(24417655-24417735)
chr1 (70-118)||(33975679-33975727)
chr1 (106-154)||(36070250-36070298)
chr1 (75-118)||(2832077-2832120)
chr1 (84-194)||(3110019-3110130)
chr1 (83-154)||(11217944-11218015)
chr1 (106-153)||(43371844-43371891)
chr1 (74-153)||(49282635-49282712)
chr1 (105-147)||(8382417-8382459)
chr1 (70-199)||(10439709-10439839)
chr1 (72-146)||(26866390-26866464)
chr1 (107-153)||(42336685-42336731)
chr1 (106-168)||(49692005-49692067)
chr1 (84-153)||(1662643-1662712)
chr1 (71-140)||(4180651-4180720)
chr1 (84-153)||(28837284-28837352)
chr1 (74-127)||(29793619-29793672)
chr1 (72-153)||(43420328-43420409)
chr1 (83-190)||(5591897-5592004)
chr1 (83-147)||(6279475-6279539)
chr1 (74-142)||(7252541-7252609)
chr1 (78-197)||(27140503-27140623)
chr1 (97-153)||(40485717-40485773)
chr1 (92-140)||(44217454-44217502)
chr1 (109-145)||(49173463-49173499)
chr1 (75-111)||(50725336-50725372)
[»] chr5 (30 HSPs)
chr5 (74-207)||(32849196-32849327)
chr5 (77-153)||(8090006-8090082)
chr5 (72-139)||(10638454-10638521)
chr5 (72-153)||(499650-499731)
chr5 (72-153)||(12459920-12460001)
chr5 (71-147)||(11104981-11105057)
chr5 (71-153)||(5377115-5377197)
chr5 (84-209)||(10125649-10125775)
chr5 (72-118)||(26004916-26004962)
chr5 (72-145)||(42646969-42647041)
chr5 (72-152)||(11297115-11297195)
chr5 (72-156)||(14599291-14599375)
chr5 (72-118)||(25705578-25705624)
chr5 (72-150)||(35135571-35135649)
chr5 (72-145)||(36639600-36639673)
chr5 (72-148)||(25720336-25720412)
chr5 (84-124)||(39257325-39257365)
chr5 (92-151)||(17259289-17259348)
chr5 (83-145)||(37968955-37969017)
chr5 (84-145)||(15015922-15015982)
chr5 (84-145)||(17258814-17258875)
chr5 (72-157)||(35445763-35445847)
chr5 (71-152)||(35960484-35960564)
chr5 (71-124)||(36796625-36796678)
chr5 (85-153)||(11095427-11095495)
chr5 (74-118)||(11615575-11615619)
chr5 (74-197)||(14980535-14980658)
chr5 (85-153)||(26796423-26796490)
chr5 (85-153)||(32172723-32172791)
chr5 (72-116)||(42034167-42034211)
[»] chr7 (38 HSPs)
chr7 (84-153)||(8094376-8094445)
chr7 (72-153)||(23214925-23215006)
chr7 (72-199)||(33894650-33894778)
chr7 (83-153)||(25670516-25670586)
chr7 (72-153)||(4970711-4970791)
chr7 (72-157)||(30748953-30749038)
chr7 (77-157)||(13960648-13960727)
chr7 (72-140)||(30751602-30751670)
chr7 (74-154)||(46091662-46091742)
chr7 (75-142)||(529443-529510)
chr7 (72-214)||(28691755-28691897)
chr7 (74-152)||(8427084-8427162)
chr7 (67-124)||(29363607-29363664)
chr7 (84-149)||(43854972-43855037)
chr7 (83-148)||(44151406-44151471)
chr7 (74-214)||(44615025-44615166)
chr7 (85-153)||(2825168-2825236)
chr7 (84-147)||(753045-753108)
chr7 (74-145)||(3836604-3836675)
chr7 (86-153)||(30496775-30496842)
chr7 (72-150)||(17942144-17942222)
chr7 (71-117)||(17988951-17988997)
chr7 (71-153)||(22387814-22387896)
chr7 (115-157)||(22940017-22940059)
chr7 (73-111)||(25659805-25659843)
chr7 (115-157)||(33678847-33678889)
chr7 (67-141)||(47041953-47042027)
chr7 (71-116)||(1418526-1418571)
chr7 (72-153)||(19302482-19302562)
chr7 (75-128)||(21073232-21073285)
chr7 (85-150)||(24895529-24895594)
chr7 (72-153)||(30535633-30535714)
chr7 (72-153)||(34035988-34036068)
chr7 (84-153)||(46825170-46825239)
chr7 (165-209)||(3968770-3968814)
chr7 (85-153)||(24973980-24974047)
chr7 (115-147)||(27863686-27863718)
chr7 (74-146)||(28727684-28727756)
[»] scaffold0050 (1 HSPs)
scaffold0050 (71-150)||(69742-69821)
[»] scaffold0020 (1 HSPs)
scaffold0020 (72-147)||(159892-159967)


Alignment Details
Target: chr3 (Bit Score: 329; Significance: 0; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 178 - 518
Target Start/End: Complemental strand, 50210886 - 50210546
Alignment:
Q  178 ttatttccataagctctccagggtaacttatgtaaaccacccataggttatttgaaaacagttgaactttatttttgtttatataattagcttgtatata 277  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50210886 ttatttccataagctctccagggtaacttatgaaaaccacccataggttatttgaaaacaattgaactttatttttgtttatataattagcttgtatata 50210787  T
Q  278 agagcttatgctataagcacttagttaagttgtccaccgaaataggaaatggcttttgttgctactcatgctgctactgaatttgcagactgctgaagtg 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  50210786 agagcttatgctataagcacttagttaagttgtccaccgaaataggaaatggcttttgttgctactcatgctgctactgaatttgcagactgctgaagcg 50210687  T
Q  378 aaatgtgtcgtgcgctcatgcatcaaactgccaacatcacttggaccacctcccccaattgaggattggggatgtcttccttcattggagcagctgggac 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50210686 aaatgtgtcgtgcgctcatgcatcaaactgccaacatcacttggaccacctcccccaattgaggattggggatgtcttccttcattggagcagctgggac 50210587  T
Q  478 tttcctcacagaatgtaggttttgccataagtatacctgtg 518  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  50210586 tttcctcacagaatgtaggttttgccataagtatacctgtg 50210546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 50211947 - 50211773
Alignment:
Q  11 ttatactcaatttcgtaaggcatggtatttcaattgacatgtgtatagatttatatggatttgtttggattaacttattttagcttatctactaacataa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50211947 ttatactcaatttcgtaaggcatggtatttcaattgacatgtgtatagatttatatggatttgtttggattaacttattttagcttatctactaacataa 50211848  T
Q  111 gcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccatagttgatttcattttatttcc 185  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50211847 gcacttgtaagactgtttgagagaacttatgaaaacaacttataacacatccatagttgatttcatcttatttcc 50211773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 31403504 - 31403425
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||| ||||| || |||||||||||||||||||| ||||| ||||||||||| |||||||||||| ||||  ||||||||    
T  31403504 gattgacttacttgagcttatctactaacataagtacttgcaagactatttgggagaacttatgagaacagtttataaca 31403425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 44295678 - 44295604
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 146  Q
    ||||| |||| |||| ||| ||||||||||| | ||||||||||||| | |||||||||||||||||||||||||    
T  44295678 tgtttagattgacttgtttgagcttatctacaagcataagcacttgtgatactatttgagagaacttatgaaaac 44295604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 44014717 - 44014798
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||  ||||||| || |||||||||| ||||| ||||||| ||||| ||||||| |||||||||||||| |||||    
T  44014717 tgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttat 44014798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 47132121 - 47132064
Alignment:
Q  96 tatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||  |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  47132121 tatctactagtataaccacatgtaagactatttgagagaacttatgaaaacaacttat 47132064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 25182909 - 25182999
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata 165  Q
    |||||||| | |||||||| |||||| ||||||   |||| |||||| ||||| ||||||||| |||||||||||||||||| ||| |||||||    
T  25182909 tgtttggagtgacttatttgagcttacctacta---taagaacttgtgagactgtttgagagagcttatgaaaacaacttatgacatatccata 25182999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 21872214 - 21872271
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 129  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||| ||||| ||||    
T  21872214 tgtttggattaacttatttgatcttatctactgacataagcacttgtgagactgtttg 21872271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 22667542 - 22667469
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||||| |||||||||||| |||||||||||||| ||||| |||||||||  ||||| ||||| | |||||||    
T  22667542 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagcatataaca 22667469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 22724181 - 22724108
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||||| |||||||||||| |||||||||||||| ||||| |||||||||  ||||| ||||| | |||||||    
T  22724181 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagcatataaca 22724108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 36646300 - 36646444
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttg 169  Q
    ||||||||||  |||||||| ||| |||||| |  |||| ||||||||||||||||||| |||| |||||| |||| ||||||  ||  ||||| || ||    
T  36646300 ttgtttggatcgacttatttaagcatatctattggcataggcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctg 36646399  T
Q  170 atttcattttatttccataagctctccagggtaacttatgtaaac 214  Q
     |||||| ||||||| |||| ||||| ||| || |||||| ||||    
T  36646400 ttttcatcttatttctataaactctctaggatagcttatgaaaac 36646444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 153
Target Start/End: Complemental strand, 1810102 - 1810047
Alignment:
Q  98 tctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||||| ||||||| ||||||||||||||| |||| | |||||||||||    
T  1810102 tctactaacataatcacttgtgagactatttgagagagcttacggaaacaacttat 1810047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 37273273 - 37273142
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatttcattttatt 182  Q
    ||||||| | ||||| || || |||||||||| || ||||| |||| |||| |||||| ||||||||||| |||  ||||| ||||| |||||  |||||    
T  37273273 cttatttgaacttatttattagcataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatt 37273174  T
Q  183 tccataagctctccagggtaacttatgtaaac 214  Q
    |||||||| |||||| | || |||||| ||||    
T  37273173 tccataagttctccaagatagcttatgaaaac 37273142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 2413598 - 2413672
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 146  Q
    |||||||||| |||||||| | || ||||| || ||||| |||||||||| || ||||||||| |||||||||||    
T  2413598 tgtttggatttacttatttgaactcatctattagcataatcacttgtaagtctgtttgagagagcttatgaaaac 2413672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 24158437 - 24158515
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    ||||||||  ||||||| |||||||||||| ||||||| |||||| | ||| |||| |||| |||||| ||||||||||    
T  24158437 tttggattggcttatttaagcttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaacaactta 24158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 25925872 - 25925810
Alignment:
Q  80 ttaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatga 142  Q
    ||||||||||| | ||||||||||  ||||||||||||||| ||| ||| |||||||||||||    
T  25925872 ttaacttatttgaacttatctactggcataagcacttgtaacactgttttagagaacttatga 25925810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 41644369 - 41644443
Alignment:
Q  77 ggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactt 151  Q
    |||||||||| ||| ||||||||||||| ||||||||||||  | ||| |||  |||||||||| ||||||||||    
T  41644369 ggattaacttctttgagcttatctactagcataagcacttgagacactgtttaggagaacttataaaaacaactt 41644443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 47584577 - 47584523
Alignment:
Q  96 tatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 150  Q
    |||||| | |||||||||||||| ||||||||||||||| |||||||||| ||||    
T  47584577 tatctattgacataagcacttgtgagactatttgagagagcttatgaaaagaact 47584523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 2175804 - 2175849
Alignment:
Q  108 taagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||    
T  2175804 taagcacttgtaagactatttgagatagtttatgaaaacaacttat 2175849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 2304202 - 2304271
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| | || |||||||| ||||| ||||||| | |||||||||||||| |||||||| ||||||||    
T  2304202 cttatttgaactgatctactagcataaacacttgtgaaactatttgagagaaattatgaaagcaacttat 2304271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 11253652 - 11253571
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||| |||||||| || |||||||||| ||||||||||||  ||||| ||||  |||| |||| ||||||||||||    
T  11253652 tgtttgaattgacttatttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaacttat 11253571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 28828910 - 28828943
Alignment:
Q  122 actatttgagagaacttatgaaaacaacttataa 155  Q
    ||||||||||||||||||||||||||||||||||    
T  28828910 actatttgagagaacttatgaaaacaacttataa 28828943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 30573834 - 30573914
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||  |||||||| |||| ||||||| |||||||||||||| ||  | |||| |||||||||||||||||| ||||    
T  30573834 tgtttggatggacttatttgagct-atctactgacataagcacttgtgagtttgtttgtgagaacttatgaaaacaaattat 30573914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 19679260 - 19679328
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| || |||||||||| ||||||||||||  | | | |||||||||||||| |||||||||||||    
T  19679260 ttatttgagtttatctactagcataagcacttgcgaaaatctttgagagaacttacgaaaacaacttat 19679328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 24785412 - 24785332
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||| | ||| |||  |||||||||  |||||| ||||    
T  24785412 tgtttggatcaacttattttagcttatctattgccataagcacttgtgacactgtttcggagaacttacaaaaacatctta 24785332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 45590804 - 45590732
Alignment:
Q  70 tttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatga 142  Q
    |||||||| ||| |||| ||| | ||||||||||| ||||||||||||| ||||| |||| |||| |||||||    
T  45590804 tttgtttgaattgacttttttgaacttatctactagcataagcacttgtgagactgtttgggagagcttatga 45590732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 110
Target Start/End: Original strand, 8007584 - 8007623
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataa 110  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  8007584 ttgtttggattgacttattttagcttatctacttacataa 8007623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 24624339 - 24624280
Alignment:
Q  94 cttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||| ||||||||||||||| ||||  ||| |||||||||||| |||||    
T  24624339 cttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttat 24624280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 24625267 - 24625342
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||| ||| ||||||| ||||  |||||||||||||||| ||  |||||||| ||||| ||||||| ||||    
T  24625267 gattaacttgtttgagcttatttactggcataagcacttgtaaggctgattgagagagcttattaaaacaatttat 24625342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 49465586 - 49465665
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||| |||||||| || |||| ||||| ||||||||||||| | | | |||  ||||||||||||||||| |||||    
T  49465586 tttggattgacttatttcagtttatttactaccataagcacttgtgatattgtttcggagaacttatgaaaacagcttat 49465665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 4534294 - 4534380
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacac 158  Q
    ||||| |||| | |||||| |||||||||| | |||||||| ||||||| ||||||||  |||  ||||  ||||||||||||||||    
T  4534294 tgtttcgattgatttatttgagcttatctattcacataagcccttgtaaaactatttggtagaggttatagaaacaacttataacac 4534380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 11041160 - 11041214
Alignment:
Q  87 attttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 141  Q
    |||| |||||||||||||| ||||||||||||  |||| ||||||||| ||||||    
T  11041160 atttgagcttatctactaagataagcacttgtgggactgtttgagagagcttatg 11041214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 37795744 - 37795667
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    |||||||| |||||||| |||||||| ||| |||||||  ||||||||||| ||||  || |||||| |||||||||||    
T  37795744 tttggattgacttatttaagcttatccactgacataagt-cttgtaagactgtttggaaggacttattaaaacaactta 37795667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 47513764 - 47513678
Alignment:
Q  112 cacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata-gttgatttcattttatttccataagctctcca 197  Q
    ||||||| ||||| || | ||| |||||||||||||| |||| |||| | |||| |||| ||||| ||||||| |||||||||||||    
T  47513764 cacttgtgagactgttcgggaggacttatgaaaacaagttatgacacgttcataagttgttttcaatttattttcataagctctcca 47513678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 50760742 - 50760668
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 146  Q
    ||||| |||| |||||||| |||| |||||| | ||||||||||||| | ||   ||||||||||||||||||||    
T  50760742 tgtttagattgacttatttgagctcatctacaagcataagcacttgtgacaccgcttgagagaacttatgaaaac 50760668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 24281197 - 24281072
Alignment:
Q  73 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgat 171  Q
    |||| |||| |||||||| ||  ||||||||   ||||||||||||  || | ||||||||| |||||||||||||||||| | |  ||||| ||||| |    
T  24281197 gtttagattgacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccataagttgtt 24281098  T
Q  172 ttcattttatttccataagctctcca 197  Q
    ||||  ||| || |||||||||||||    
T  24281097 ttcaacttactttcataagctctcca 24281072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 24684739 - 24684772
Alignment:
Q  70 tttgtttggattaacttattttagcttatctact 103  Q
    ||||||||||||||||||||| ||||||||||||    
T  24684739 tttgtttggattaacttatttgagcttatctact 24684772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 32663789 - 32663712
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 149  Q
    ||||||||||  ||||||| |||||||||||  ||| |  ||||||| |||||||||||||||  ||||| |||||||    
T  32663789 tgtttggattggcttatttgagcttatctaccgacaaatacacttgtgagactatttgagagagtttatggaaacaac 32663712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 34707449 - 34707494
Alignment:
Q  106 cataagcacttgtaagactatttgagagaacttatgaaaacaactt 151  Q
    ||||||| ||||| ||||| ||||||||||||| ||||||||||||    
T  34707449 cataagcgcttgtgagactgtttgagagaacttttgaaaacaactt 34707494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 39980880 - 39980800
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||  ||| ||| ||||||||||||| ||||||   |||| ||||| ||| |||||||||||||||||| |||||    
T  39980880 tgtttggattggcttgtttgagcttatctactagcataagtt-ttgtgagactgtttaagagaacttatgaaaacagcttat 39980800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 40240740 - 40240785
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttg 117  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  40240740 tgtttggattaacttatttgagcttatatactagcataaacacttg 40240785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 157
Target Start/End: Original strand, 45535187 - 45535224
Alignment:
Q  120 agactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  45535187 agactatttgggagaacttatggaaacaacttataaca 45535224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 45541722 - 45541641
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| ||||||| || |   |||| ||||||||||||| |||   |||||||||||||||| |||||    
T  45541722 tgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttat 45541641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 49845459 - 49845540
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| ||||||| |||||  ||||  |||| | | |||||||| |||| |||||| |||||||||||    
T  49845459 tgtttggattgacttatttgagcttatatactagtataaaaacttatgaaactatttgggagagcttatggaaacaacttat 49845540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 52323813 - 52323906
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata 165  Q
    ||||| |||| ||||| || || | ||||||||||||||||||||| |||||| |||| |||| |||||  ||| || |||| |||| ||||||    
T  52323813 tgtttagattgacttaattgagttgatctactaacataagcacttgcaagactgtttgtgagagcttattgaaataatttatgacacgtccata 52323906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 9996002 - 9995935
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||||||| ||||||||||| ||||| ||| | |||||| ||||||||| | |||||||||||    
T  9996002 ttatttgagcttatgtactaacataaacacttctaacattatttg-gagaacttaaggaaacaacttat 9995935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 10217019 - 10216952
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||||||| ||||||||||| ||||| ||| | |||||| ||||||||| | |||||||||||    
T  10217019 ttatttgagcttatgtactaacataaacacttctaacattatttg-gagaacttaaggaaacaacttat 10216952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 165
Target Start/End: Original strand, 20173811 - 20173900
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata 165  Q
    |||||||| |||||||| ||| |||||| | | |||||||||||| ||||  |||  |||||| |||| ||||||||||| || ||||||||    
T  20173811 tttggattgacttatttgagcgtatctattgaaataagcacttgtgagacagttt--gagaacctatggaaacaacttatgactcatccata 20173900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 35903086 - 35903158
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaa 144  Q
    |||||| ||| |||||||| || | ||| |||||||||||||||| | | ||| ||| |||||||||||||||    
T  35903086 tgtttgaattgacttatttgagttcatcaactaacataagcacttatgacactgtttcagagaacttatgaaa 35903158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 41724350 - 41724282
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| | |||||||||| ||||||| |||||| ||||  |||| || |||||||| |||||||||||    
T  41724350 ttatttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttat 41724282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 41848641 - 41848685
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaaga 122  Q
    |||| |||||||| || |||||||||||||||| |||||||||||    
T  41848641 gattgacttatttgagtttatctactaacataaacacttgtaaga 41848685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 4e-21; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 9700152 - 9700028
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttga 170  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||| ||| ||||| ||| |||| |||  ||||| || ||     
T  9700152 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagctgt 9700053  T
Q  171 tttcattttatttccataagctctc 195  Q
    |||||  |||||| |||||||||||    
T  9700052 tttcaccttattttcataagctctc 9700028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 2487927 - 2488012
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||||||||  ||||||| || | ||||||| |||||||||||||| ||||| |||| |||||||||||||||||||||||||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttataaca 2488012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 7853523 - 7853437
Alignment:
Q  79 attaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata 165  Q
    |||||||||||||| ||| ||||||  |||||||||| || |||||||||| |||||||| ||||||||||| || ||| |||||||    
T  7853523 attaacttattttaccttttctactggcataagcactagtgagactatttgggagaacttgtgaaaacaactaatgacatatccata 7853437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 4511168 - 4511099
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    |||| ||||||||||||||||   |||||||||||| |||||||| || |||||||||||||||||||||    
T  4511168 acttgttttagcttatctactggtataagcacttgtgagactattcgaaagaacttatgaaaacaactta 4511099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 16162911 - 16162830
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||  ||||||| || |||||||||| ||||| ||||||| ||||| ||||||| |||||||||||||| |||||    
T  16162911 tgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttat 16162830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 6526171 - 6526253
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttata 154  Q
    |||||||||| |||||||  ||| ||||||||  ||||||| ||||| ||| | |||||||||||||| ||||||||||||||    
T  6526171 tgtttggattgacttattcgagcctatctactggcataagcccttgtgagattgtttgagagaacttaggaaaacaacttata 6526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 26479936 - 26479855
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| |||||||||| | ||| ||| |||||| | |||||||| |||| |||||| |||||||||||    
T  26479936 tgtttggattgacttatttaagcttatctattgacacaaggacttgtgaaactatttgcgagagcttatggaaacaacttat 26479855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 43368619 - 43368700
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| | |||||||||||||||||||| |||| |||||  |||  | | ||||||||||||||||||    
T  43368619 tgtttggattgacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttat 43368700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 4560652 - 4560568
Alignment:
Q  73 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||||||| |||||||| |||||||||| | |||||||||||||| ||  | ||||  |||||||||| ||| |||||||||||    
T  4560652 gtttggattgacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttatggaaataacttataaca 4560568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 7918713 - 7918781
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| | ||||||||||| ||||| ||||||| ||||| |||| |||| ||||||||||||||||||    
T  7918713 ttatttaaacttatctactagcataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 7918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 1821978 - 1821895
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||| ||| |||||||| ||||||  |||  |||||| ||||||||||||||||||  ||||||||||| |||| |||||||||    
T  1821978 tttgaattgacttatttgagcttagataccgacataaacacttgtaagactatttggaagaacttatgataacatcttataaca 1821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 1856423 - 1856340
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||| ||| |||||||| ||||||  |||  |||||| ||||||||||||||||||  ||||||||||| |||| |||||||||    
T  1856423 tttgaattgacttatttgagcttagataccgacataaacacttgtaagactatttggaagaacttatgataacatcttataaca 1856340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 18331866 - 18331819
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgt 118  Q
    ||||||||||| |||||||| | |||||||||||||||||||||||||    
T  18331866 ttgtttggattgacttatttgatcttatctactaacataagcacttgt 18331819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 2483014 - 2482936
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 150  Q
    |||||| ||||| ||| ||||||||||| ||  |||||||| ||||| ||||| |||| ||||||||| ||||||||||    
T  2483014 tgtttgaattaatttaatttagcttatccacagacataagcccttgtgagactgtttgggagaacttaagaaaacaact 2482936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 35534543 - 35534612
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||| ||||||||||||||||||||   |||| ||||| ||||||||||||| |||||||| |||||    
T  35534543 acttatttgagcttatctactaacataag-ttttgtgagactgtttgagagaacttgtgaaaacagcttat 35534612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 11376842 - 11376781
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||| |||||||||||| | |||||  ||||| |||||||||| |||||||||||||||    
T  11376842 cttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaa 11376781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 34771019 - 34770938
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| || |||||||| || |||||| ||| ||||||||||||| | ||| ||||||||| | |||||||||| |||||    
T  34771019 tgtttggtttgacttatttgagtttatctgctagcataagcacttgtgaaactgtttgagagatcctatgaaaacagcttat 34770938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 35928649 - 35928693
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcactt 116  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||    
T  35928649 tgtttggattgtcttattttagcttatctactgacataagcactt 35928693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 3634609 - 3634664
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagag 133  Q
    |||| |||||||| ||||||||| || ||||| |||||||||||||| ||||||||    
T  3634609 gattgacttatttgagcttatctgctgacatatgcacttgtaagactgtttgagag 3634664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 8060821 - 8060739
Alignment:
Q  70 tttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||||| |||||||| ||| |||||| | |||||| |||||  || ||| ||||||||| ||||||||||||| ||||    
T  8060821 tttgtttggattgacttatttgagcatatctattgacataaacacttcgaa-actgtttgagagagcttatgaaaacaaattat 8060739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 14926900 - 14926963
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagaga 134  Q
    ||||||||||| |||||||| | ||||| ||||  ||||||||||||| ||||| |||||||||    
T  14926900 ttgtttggattgacttatttgaacttatttactggcataagcacttgtgagactgtttgagaga 14926963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 33553392 - 33553345
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgt 118  Q
    |||||||||||| ||||||| ||||||||||  |||||||||||||||    
T  33553392 ttgtttggattagcttatttgagcttatctatcaacataagcacttgt 33553345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 33940134 - 33940087
Alignment:
Q  107 ataagcacttgtaagactatttgagagaacttatgaaaacaacttata 154  Q
    |||||||||||| |||| |||||||||| |||||||||||| ||||||    
T  33940134 ataagcacttgtgagacaatttgagagagcttatgaaaacagcttata 33940087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 34849255 - 34849176
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactt 151  Q
    |||| |||||| ||||||| |||||| |||||  |||||| |||| | ||||| |||| ||||||| |||||||||||||    
T  34849255 tgttcggattagcttatttgagcttagctactggcataagtacttttgagactgtttgggagaactaatgaaaacaactt 34849176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 30918220 - 30918138
Alignment:
Q  115 ttgtaagactatttgagagaacttatgaaaacaacttataacacatccatagttgatttcattttatttccataagctctcca 197  Q
    |||| ||||| ||||||||| |||||||||||||||| | |||  ||   ||||| |||||  ||||||||||||||||||||    
T  30918220 ttgtgagactgtttgagagagcttatgaaaacaacttgtgacatttcataagttgttttcagcttatttccataagctctcca 30918138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 31884872 - 31884934
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||| ||||||||||||| ||||||||||||| ||| | |||| || ||||||| ||||||    
T  31884872 ttatttgagcttatctactagcataagcacttgtgagagtgtttgggaaaacttataaaaaca 31884934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 32976524 - 32976478
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgt 118  Q
    ||||||||||  ||||||| |||||||||||| ||||||||||||||    
T  32976524 tgtttggattcccttatttgagcttatctactgacataagcacttgt 32976478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 778540 - 778463
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 149  Q
    ||||||| || ||||||||   ||||| |||| | |||||||||||| ||||| ||||  ||||||||||||||||||    
T  778540 tgtttggtttgacttatttgtacttatttactgaaataagcacttgtgagactgtttgcaagaacttatgaaaacaac 778463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 29417542 - 29417611
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||||||||| ||  |||||| ||||||| || || ||||||||||  | ||||||||||||||    
T  29417542 cttattttagcttatcgaccgacataaacacttgtgaggctgtttgagagaaagtgtgaaaacaacttat 29417611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 30191072 - 30191141
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| || ||||||| |  ||||||||||||| ||||| |||| |||| |||||| |||||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttat 30191141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 39049403 - 39049338
Alignment:
Q  92 agcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||||||||||| ||||| || |||| ||| | |||| || | ||||||||||||||||||||||    
T  39049403 agcttatctactagcataaacatttgtgagattgtttgtgaaagcttatgaaaacaacttataaca 39049338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 43045644 - 43045728
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||||||||  ||||||| ||||||||||||| |||||| | |||| ||||| |||  |||| |||||||||||| |||| ||||    
T  43045644 tgtttggattggcttatttaagcttatctactagcataag-atttgtgagactgttttggagatcttatgaaaacagcttacaaca 43045728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 43717855 - 43717927
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    ||||||||  ||||||| |||||||||| | |||||||   |||| |||||||||| |||||||||||||||||    
T  43717855 tttggattggcttatttgagcttatctattgacataagtt-ttgtgagactatttgggagaacttatgaaaaca 43717927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 44236742 - 44236815
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||||||| ||||||| || |||||||||  ||||||||||||| ||||| || | |||||  ||||||||    
T  44236742 tgtttggattaccttatttgagtttatctactggcataagcacttgtgagactgttcgggagaatctatgaaaa 44236815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 10114584 - 10114556
Alignment:
Q  129 gagagaacttatgaaaacaacttataaca 157  Q
    |||||||||||||||||||||||||||||    
T  10114584 gagagaacttatgaaaacaacttataaca 10114556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 10488622 - 10488562
Alignment:
Q  64 tatggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagact 124  Q
    ||||| ||||||||||||  ||||||| |||||||| |||||||||| ||| ||| |||||    
T  10488622 tatgggtttgtttggattggcttatttgagcttatcaactaacataaacacatgtgagact 10488562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 24326167 - 24326107
Alignment:
Q  87 attttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||| ||||||||||||  ||||||||||||| ||||| |||| |||| |||||| |||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaaca 24326107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 28763498 - 28763435
Alignment:
Q  93 gcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||||||| |||||||||   |||| ||||| |||| ||||||||||||||||| |||||||||    
T  28763498 gcttatctagtaacataagtt-ttgtgagactgtttgggagaacttatgaaaacagcttataaca 28763435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 38436040 - 38436092
Alignment:
Q  95 ttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||||||  |||||||||||||| || |||| ||| |||||||||||||||    
T  38436040 ttatctactggcataagcacttgtatgattattcgagtgaacttatgaaaaca 38436092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 41589724 - 41589653
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||||| ||||| |||||| ||||||||  || | ||||| |||  |||||||||||||||||||||||||||    
T  41589724 ttatttgagcttgtctactgacataagctttt-tgagactgttttggagaacttatgaaaacaacttataaca 41589653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 43504890 - 43504822
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    ||||||| ||||||||||||  | |||||||||||  |||| |||  ||||||| ||||||||||||||    
T  43504890 cttatttaagcttatctactggcttaagcacttgtgtgactgtttcggagaactgatgaaaacaactta 43504822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 19978099 - 19978012
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacac 158  Q
    ||||||||||| ||||||||||| ||||||| ||| |||||||||||  ||||| |||||||||||||||  ||||||||||||||||    
T  19978099 ttgtttggattcacttattttagtttatctattaaaataagcacttgcgagactgtttgagagaacttatagaaacaacttataacac 19978012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 22878249 - 22878160
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatc 161  Q
    |||||||||| |||||||| |||||||| ||| |||||||||||||| ||||| |||| |||| |||||| |||||| |||| |||||||    
T  22878249 tgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaaattatgacacatc 22878160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 31982450 - 31982370
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    ||||||| || |||||||| |||||| |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||    
T  31982450 tgtttgggttgacttatttaagcttacctactaacataagcacctgtgacactatttgggagaacttatgaaaacagctta 31982370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 3973693 - 3973612
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| |||||||| ||| | |||||||||| ||||||| ||||||||| | |||| |||||||||||    
T  3973693 tgtttggattcacttatttgagcttatccactgatataagcacttataagactgtttgagagagcatatggaaacaacttat 3973612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 8017585 - 8017504
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| || ||||||| | ||||||||||||||  || |||||| ||||||||||||||||| |||||    
T  8017585 tgtttggattgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagcttat 8017504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 13867029 - 13866952
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 149  Q
    |||||||||| || ||||| ||||||||||||  ||||| ||||||| ||||| |||||||||||||| |||||||||    
T  13867029 tgtttggattgacctatttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaac 13866952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 4350843 - 4350760
Alignment:
Q  70 tttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||||  ||||||| ||||| |||||| ||||||||||||   ||| | |||||||||||||||||||||| |||||    
T  4350843 tttgtttggattggcttatttgagcttctctactgacataagcacttaagagattgtttgagagaacttatgaaaacagcttat 4350760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 214
Target Start/End: Original strand, 12313092 - 12313235
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttga 170  Q
    |||||| |||| ||||||| | |||| | |||| ||||||||||||| ||| | |||| ||||| ||||||||||| |||||  ||  | ||| ||||||    
T  12313092 tgtttgtattagcttatttgatcttacccactagcataagcacttgtgagattgtttgggagaatttatgaaaacagcttatgccatgttcataagttga 12313191  T
Q  171 tttcattttatttccataagctctccagggtaacttatgtaaac 214  Q
    |||||  |||||| ||||||||||||| | || |||||||||||    
T  12313192 tttcaccttattttcataagctctccaagatagcttatgtaaac 12313235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 28803451 - 28803530
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||| |||||||| |||||||||||   ||||||||| ||| ||||| ||||||||||| |||| |||||||||||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttat 28803530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 36677805 - 36677722
Alignment:
Q  71 ttgtttggattaacttattttagcttatctacta-acataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||||||||||||| || ||||||| |  |||||||||||||| ||||||||  ||||| |||||||||||| |||||    
T  36677805 ttgtttggattaacttatttgagtttatctatttgacataagcacttgtgagactattcaagagagcttatgaaaacagcttat 36677722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 27317530 - 27317450
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| |||||||||||  |||||||   || | ||||| ||||||||||||||||||||||||||||    
T  27317530 tgtttggattgacttatttgagcttatctaccgacataagtt-ttatgagactgtttgagagaacttatgaaaacaacttat 27317450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 39622098 - 39622021
Alignment:
Q  76 tggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| |||||||| | ||||||||||   |||||||||||  | ||| ||||||||||||||||||||||||||||    
T  39622098 tggatttacttatttgaacttatctacttgtataagcacttgcgacactgtttgagagaacttatgaaaacaacttat 39622021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 41170761 - 41170688
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||||||  ||||||| || |||||||||||||||| ||||||| ||||||||||  | ||||||||||||    
T  41170761 tgtttggattggcttatttgagtttatctactaacataaacacttgtgagactatttggaataacttatgaaaa 41170688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 43142012 - 43141879
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttat-gaaaacaacttataacacatccat-agttgatttcatttta 180  Q
    |||||||| |||||||||||||||||||||| |||| | ||  ||||| ||  ||||| | ||||||||||| |||   |||| ||||| ||||||||||    
T  43142012 acttatttgagcttatctactaacataagcaattgtgaaacagtttgacagcgcttatgggaaacaacttatgacatgcccataagttgttttcatttta 43141913  T
Q  181 tttccataagctctccagggtaacttatgtaaac 214  Q
    ||||||||| |||| |||| || |||||| ||||    
T  43141912 tttccataaactcttcaggatagcttatgaaaac 43141879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 43456627 - 43456704
Alignment:
Q  73 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 150  Q
    ||||||||| |||||||| | ||||| |||| |||||| ||||||||||||| ||||| ||| ||| |||||||||||    
T  43456627 gtttggatttacttatttgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaact 43456704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 11514048 - 11513972
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||||||||   |||||| || |||||||||| ||||||||||||| ||||| ||| ||||| ||||||||||||    
T  11514048 ttgtttggattggtttatttgagattatctactagcataagcacttgtgagactgttttagagagcttatgaaaaca 11513972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 13869050 - 13869097
Alignment:
Q  95 ttatctactaacataagcacttgtaagactatttgagagaacttatga 142  Q
    ||||||||| |||||||||||| | |||||||||||||||||||||||    
T  13869050 ttatctactgacataagcacttatgagactatttgagagaacttatga 13869097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 17775389 - 17775460
Alignment:
Q  76 tggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    ||||||||||||||| ||| |||||||| |||||||| ||| ||||||| ||||||||   |||||||||||    
T  17775389 tggattaacttatttgagcatatctactgacataagctcttttaagactgtttgagagggtttatgaaaaca 17775460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 28677573 - 28677704
Alignment:
Q  67 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-a 165  Q
    |||| |||||||||| | || ||| ||||||| ||||  |||||| |||  ||||||| |||| ||||||||||||||||| ||||| |||  | ||| |    
T  28677573 ggatctgtttggattgatttttttgagcttatttacttgcataagtactgctaagactgtttgggagaacttatgaaaacagcttatgacattttcataa 28677672  T
Q  166 gttgatttcattttatttccataagctctcca 197  Q
    |||| ||||   ||||||||||||||||||||    
T  28677673 gttgttttcggcttatttccataagctctcca 28677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 25609935 - 25609833
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata-gttgatttcattttatt 182  Q
    ||||||| |||||||||||||||||||| |||||| |||||  |||  | | |||||| ||||||||||| ||| ||||||| |||| ||||| ||| ||    
T  25609935 cttatttgagcttatctactaacataagaacttgtgagactgcttggaatagcttatggaaacaacttatgacaaatccatatgttgttttcaatttctt 25609836  T
Q  183 tcc 185  Q
    |||    
T  25609835 tcc 25609833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 30331903 - 30331830
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||||||| |||||||| |||||||||||| |||||||   |||| ||||| |||| |||||||||||||||    
T  30331903 ttgtttggattgacttatttcagcttatctactgacataag-ttttgtgagactgtttgggagaacttatgaaaa 30331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 2964728 - 2964809
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||||||||||| | |||||||||   ||||| ||||||  ||| | |||||| ||||||||||||||| |||||    
T  2964728 tgtttggattaacttatttgaacttatctaccggcataaacacttgcgagaatgtttgagtgaacttatgaaaacagcttat 2964809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 4607076 - 4606996
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||  ||||||| ||||||||||| || |||||   |||| |||||||||| |||||||| ||||||||||||||    
T  4607076 tgtttggattggcttatttgagcttatctaccaatataagtt-ttgtgagactatttgggagaacttgtgaaaacaacttat 4606996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 6548040 - 6547971
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 141  Q
    |||||||||| |||||||  ||||||||||||| |||||| |||||| ||||| |||||| || ||||||    
T  6548040 tgtttggattgacttattcaagcttatctactagcataagaacttgtgagactgtttgagggagcttatg 6547971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 24098235 - 24098190
Alignment:
Q  88 ttttagcttatctactaacataagcacttgtaagactatttgagag 133  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||    
T  24098235 ttttagcttatctagtagcataagcacttgtaaaactatttgagag 24098190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 40077430 - 40077511
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||| |||||| | ||||||| |||| |||||||||||| ||||||| ||||||| |   ||||||||||||||||    
T  40077430 tgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttat 40077511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 74 - 214
Target Start/End: Complemental strand, 40158867 - 40158726
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatt 172  Q
    ||||||||  ||||||| ||| |||||||| ||||||| |||||| |||||  ||| | ||||||||||||||| ||||| |||  |  || ||||| ||    
T  40158867 tttggattggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgtttataagttgttt 40158768  T
Q  173 tcattttatttccataagctctccagggtaacttatgtaaac 214  Q
    |||  ||| || ||||||||||||||  ||||||||| ||||    
T  40158767 tcagcttaattacataagctctccagaataacttatgaaaac 40158726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 40776020 - 40776097
Alignment:
Q  76 tggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||||| || || |||||||||||||||||||||| |||  || ||||  |||||||||||||||| |||||    
T  40776020 tggattgacttacttgagtttatctactaacataagcacttataaacctgtttggaagaacttatgaaaacagcttat 40776097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 9478444 - 9478324
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatttcat 176  Q
    |||| |||||||| | ||||||||| |||||||| ||||||  |||| |||||||||  ||||| ||||||||||| |||  ||||| || || ||||||    
T  9478444 gattgacttatttgaacttatctaccaacataagtacttgtgtgactgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttcat 9478345  T
Q  177 tttatttccataagctctcca 197  Q
     ||| |||||| | |||||||    
T  9478344 cttacttccatcaactctcca 9478324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 24347872 - 24347792
Alignment:
Q  74 tttggattaacttatttt-agcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||  |||||||| ||| | ||||||  |||||| |||||| ||||||||| ||||||||||||||| ||||||||    
T  24347872 tttggattggcttattttgagcctttctactcgcataagtacttgtgagactatttcagagaacttatgaaagcaacttat 24347792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 29430896 - 29430836
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    |||||| |||||||||||| |||||| |||||||  |||||||||  ||||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaa 29430836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 32821965 - 32821837
Alignment:
Q  67 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-a 165  Q
    |||| ||||| |||| |||||||| ||||||||||| ||| |||||| ||| |||||| ||||  |||  ||||  ||||||||||| |||  ||||| |    
T  32821965 ggatctgtttagattgacttatttgagcttatctaccaacgtaagcatttgcaagactgtttggaagagtttatagaaacaacttatgacatgtccataa 32821866  T
Q  166 gttgatttcattttatttccataagctct 194  Q
    | || ||||| |||||||| |||||||||    
T  32821865 gctgttttcagtttatttctataagctct 32821837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 33981270 - 33981186
Alignment:
Q  76 tggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacat 160  Q
    ||||||| ||||||| |||||| |||||| | ||||||||||| ||||| | ||| | |||||||||||||  ||||| ||||||    
T  33981270 tggattagcttatttgagcttacctactagcttaagcacttgtgagactgtctgaaaaaacttatgaaaacggcttatgacacat 33981186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 43808668 - 43808628
Alignment:
Q  113 acttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  43808668 acttgtaagactatttgagagagcttatgaaaataacttat 43808628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 111
Target Start/End: Complemental strand, 18179100 - 18179061
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataag 111  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  18179100 tgtttggattgacttatttgagcttatctactaacataag 18179061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 30990358 - 30990401
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcact 115  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||    
T  30990358 tgtttggattggcttatttgagcttatctactaacataagcact 30990401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 43530042 - 43530105
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    ||||||| |||| ||||||||||||| |||||||| ||| |  ||| |||||||||||||||||    
T  43530042 cttatttgagctaatctactaacatatgcacttgtgagagtgcttgggagaacttatgaaaaca 43530105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 787484 - 787402
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||||   |||||  ||| ||||||||  ||||||||||||| | ||| |||| ||||||||||||||||| |||||    
T  787484 ttgtttggattggattattcgagcatatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttat 787402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 15120339 - 15120253
Alignment:
Q  67 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||| |||||||||| |||||||| | ||||||||||| ||||| || |||| |  || |||| |||| |||||| |||||||||||    
T  15120339 ggatctgtttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttat 15120253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 32837439 - 32837389
Alignment:
Q  107 ataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||| |||||| ||||| |||| ||||||||||||||||| |||||||||    
T  32837439 ataagtacttgtgagactgtttgggagaacttatgaaaacagcttataaca 32837389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 43811262 - 43811180
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||| | |||||| | ||||||||||| |  |||||||||| | ||| ||||||| | |||||| |||||||||||    
T  43811262 ttgtttggattgatttatttaatcttatctactagctcaagcacttgtgatactgtttgagaaaccttatggaaacaacttat 43811180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 1626009 - 1625980
Alignment:
Q  115 ttgtaagactatttgagagaacttatgaaa 144  Q
    ||||||||||||||||||||||||||||||    
T  1626009 ttgtaagactatttgagagaacttatgaaa 1625980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 3078527 - 3078584
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 129  Q
    |||||||||| |||||||| ||||||||||| |||| || ||||||| | ||||||||    
T  3078527 tgtttggattgacttatttgagcttatctaccaacacaaacacttgtcaaactatttg 3078584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 4326315 - 4326374
Alignment:
Q  72 tgtttggattaacttattttagcttat---ctactaacataagcacttgtaagactattt 128  Q
    |||||||||| |||||||| |||||||   |||||  |||||||||||||||||||||||    
T  4326315 tgtttggattgacttatttgagcttattatctactgtcataagcacttgtaagactattt 4326374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 165
Target Start/End: Complemental strand, 9478108 - 9478015
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata 165  Q
    |||| ||||| |||||||| | |||||||| || || || ||||| | |||||||| | |||  |||||||||||||||||| ||| |||||||    
T  9478108 tgttgggattgacttatttgaacttatctattagcacaaacacttatgagactattcgggagtccttatgaaaacaacttatcacatatccata 9478015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 9996889 - 9996808
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| || |||||||| |||||||| |||| |||||| |||||| |||||  ||| |||| |||||  |||||||||||    
T  9996889 tgtttggcttgacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttat 9996808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 15370242 - 15370299
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 129  Q
    |||||||||| |||||||| ||||||||||||  |||||||| |||| ||||| ||||    
T  15370242 tgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttg 15370299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 15377904 - 15377824
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata 165  Q
    ||||||| ||||||| |||||||||||||| ||||||| || |||| || ||  |||| ||||||||||| |||| ||||||    
T  15377904 cttatttgagcttatgtactaacataagcaattgtaaggctgtttg-gaaaatctatggaaacaacttatgacacgtccata 15377824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 19629464 - 19629427
Alignment:
Q  120 agactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  19629464 agactatttgggagaacttatggaaacaacttataaca 19629427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 19826365 - 19826328
Alignment:
Q  120 agactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  19826365 agactatttgggagaacttatggaaacaacttataaca 19826328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 37276895 - 37276838
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 129  Q
    |||||||||  |||||||| || ||||||||||| |||||||||||| ||||| ||||    
T  37276895 tgtttggatcgacttatttaagtttatctactaatataagcacttgtgagactgtttg 37276838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 38076992 - 38077072
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    ||||| |||| || ||||| ||||| |||| | |||||| ||||||| ||| | ||||||||||||| | |||||||||||    
T  38076992 tgtttcgattgacatatttgagcttttctattcacataaacacttgtgagattgtttgagagaacttcttaaaacaactta 38077072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 40759311 - 40759259
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagact 124  Q
    ||||||||||  ||||||| |||||||||| | |||||||||||||| |||||    
T  40759311 tgtttggattgccttatttgagcttatctattgacataagcacttgtgagact 40759259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 43065428 - 43065512
Alignment:
Q  131 gagaacttatgaaaacaacttataacacatccatag-ttgatttcattttatttccataagctctccagggtaacttatgtaaac 214  Q
    |||| |||||||||||||||||| |||  ||||||  ||| |||||  ||||||| |||||||||||| | ||||||||| ||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaac 43065512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 44606062 - 44606110
Alignment:
Q  105 acataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| ||||||| |||| ||||  ||||||||||||||||||||||    
T  44606062 acataagtacttgtacgactgtttggaagaacttatgaaaacaacttat 44606110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 6e-20; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 2460070 - 2460196
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttga 170  Q
    ||||||||||||||||||| |||||||  |||| |||||| |||||| ||||| ||||||||| |||||| ||||||||||| |||  ||  | |||||     
T  2460070 tgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgt 2460169  T
Q  171 tttcattttatttccataagctctcca 197  Q
    |||||  ||||||||||||||||||||    
T  2460170 tttcaacttatttccataagctctcca 2460196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 10031860 - 10031757
Alignment:
Q  95 ttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatttcattttatttccataagctc 193  Q
    ||||||||| |||||||||||||| ||||| ||||| ||| | ||||||| |||||||  ||| |||||| ||||| |||||| |||||||| |||||||    
T  10031860 ttatctactgacataagcacttgtgagactgtttgaaagagcctatgaaaccaacttacgacatatccataagttgttttcatcttatttccttaagctc 10031761  T
Q  194 tcca 197  Q
    ||||    
T  10031760 tcca 10031757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 32205932 - 32206005
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    |||||||||| |||||||| | ||||||||||| |||||| |||| |||| || ||||||||||||||||||||    
T  32205932 tgtttggattgacttatttgaccttatctactagcataagtacttataaggctttttgagagaacttatgaaaa 32206005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 35070385 - 35070466
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    |||||||||||  ||||||| |||||||||||||||||||||||||||  |||| |||| ||||||  ||||||||| ||||    
T  35070385 ttgtttggattttcttatttgagcttatctactaacataagcacttgtgggactgtttgggagaacaaatgaaaacagctta 35070466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 33089657 - 33089577
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    ||||||| || |||||||| |||||||||||| ||||| | | |||| ||||||||| |||||||||||||||||| ||||    
T  33089657 tgtttgggttgacttatttgagcttatctactgacatatgtatttgtgagactatttcagagaacttatgaaaacagctta 33089577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 26559160 - 26559239
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||||||||| || ||| |||||  |||||||| |||| ||||| ||||  ||||||||||||||||||||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttat 26559239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 4325224 - 4325281
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 129  Q
    |||||||||| ||| ||||||| |||||||||||||||| ||||||| ||||||||||    
T  4325224 tgtttggattgactaattttagtttatctactaacataaacacttgtgagactatttg 4325281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 34538137 - 34538217
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    |||||| ||| ||| |||||  |||||||||| | |||||||||||| ||||||||||||||| ||||| |||||| ||||    
T  34538137 tgtttgaattgactcattttttcttatctactcatataagcacttgtgagactatttgagagatcttataaaaacagctta 34538217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 1432291 - 1432228
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagaga 134  Q
    |||||||||||   ||||||||||||||||||| ||||||||| |||| ||||| |||||||||    
T  1432291 ttgtttggattggtttattttagcttatctactcacataagcaattgttagactgtttgagaga 1432228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 214
Target Start/End: Original strand, 32171302 - 32171445
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatcca-tagttga 170  Q
    ||||||||||  ||||||| ||||||  || | |||||||||||||  ||||| ||||||||| |||||||||||| ||||| |||  ||||  || |      
T  32171302 tgtttggattgtcttatttcagcttaagtattgacataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctat 32171401  T
Q  171 tttcattttatttccataagctctccagggtaacttatgtaaac 214  Q
    |||||  ||||||||||||||| |||||| ||||| ||| ||||    
T  32171402 tttcagcttatttccataagctatccaggataactaatgaaaac 32171445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 34404006 - 34403883
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttga 170  Q
    ||||||||||||||||||| |||| ||  |||| ||||| ||||||| ||||| |||  ||||| ||| ||||||||||||| |||  | ||| || ||     
T  34404006 tgtttggattaacttatttcagctaataaactagcataaacacttgttagactgtttaggagaagttaagaaaacaacttatgacatgttcataaggtgt 34403907  T
Q  171 tttcattttatttccataagctct 194  Q
    |||||  |||||||||||||||||    
T  34403906 tttcaccttatttccataagctct 34403883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 3180999 - 3181069
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||| | |||||||||  |||||||||||||| ||||||||||| ||| || ||| |||||||||||    
T  3180999 acttatttgaacttatctacagacataagcacttgtgagactatttgaaagagctaatgtaaacaacttat 3181069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 20368142 - 20368180
Alignment:
Q  115 ttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20368142 ttgtaagactatttgggagaacttatgaaaacaacttat 20368180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 28005475 - 28005561
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacac 158  Q
    ||||| ||||| || |||| |||||| |||||  ||||||||||||||||||| ||| |||||  ||||| ||||| ||||||||||    
T  28005475 tgtttagattagctcatttgagcttacctactggcataagcacttgtaagactgtttaagagagtttatgtaaacagcttataacac 28005561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 19752725 - 19752802
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 149  Q
    ||||||||||||| |||||   |||||||| | |  ||||||||||| ||||||||||||||| ||||| ||||||||    
T  19752725 tgtttggattaacctatttgctcttatctagttatttaagcacttgtgagactatttgagagagcttataaaaacaac 19752802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 30536884 - 30536953
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 141  Q
    |||||||||| |||||||| || ||||||||| ||||||| |||| | ||||| |||| |||||||||||    
T  30536884 tgtttggattgacttatttgagtttatctacttacataagtacttattagactgtttgtgagaacttatg 30536953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 2455397 - 2455330
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||||||||||| ||||||||   | || | ||||||||||||||||||||||||||||||||    
T  2455397 ttatttgagcttatctacaaacataagtt-tggtgaaactatttgagagaacttatgaaaacaacttat 2455330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 30524077 - 30523965
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatcca-tagttgatttcattttat 181  Q
    |||||||| ||||||| || |  |||||||||||| |  ||| ||||||| ||||||||||||||| |||| |||  |||| |||||| ||| |  ||||    
T  30524077 acttatttgagcttatgtatttgcataagcacttgcacaactctttgagaaaacttatgaaaacaaattatgacatgtccattagttgcttttagcttat 30523978  T
Q  182 ttccataagctct 194  Q
    |||||||||||||    
T  30523977 ttccataagctct 30523965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 34544086 - 34544138
Alignment:
Q  95 ttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    ||||||||||||| |||||||||| | ||||||||| ||| ||||||||||||    
T  34544086 ttatctactaacacaagcacttgtgaaactatttgaaagatcttatgaaaaca 34544138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 209
Target Start/End: Complemental strand, 34939662 - 34939526
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatt 172  Q
    ||||||||  ||||||| | |||||||| | || |||  |||||||| | | ||||||||| |||||| ||||||||||| |||| ||| | ||||| ||    
T  34939662 tttggattggcttatttgaacttatctagtgacgtaacgacttgtaaaattgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgttt 34939563  T
Q  173 tcattttatttccataagctctccagggtaacttatg 209  Q
    |||  |||||||||||| |||| |||| || ||||||    
T  34939562 tcagcttatttccataacctcttcaggatagcttatg 34939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 1669751 - 1669798
Alignment:
Q  106 cataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||| ||||||||||||||| ||| |||| ||||||||||||||||||    
T  1669751 catatgcacttgtaagactaattgggagagcttatgaaaacaacttat 1669798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 8146991 - 8147070
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||| |||||||| || ||| ||| | |||||| ||||||| ||||| ||| | ||| ||||||||||||||||||||||    
T  8146991 gattgacttatttaagtttacctattgacataaccacttgttagactgtttcaaagagcttatgaaaacaacttataaca 8147070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 12111116 - 12111073
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttg 117  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||    
T  12111116 tttggattgacttatttgagcttatctactagcataagcacttg 12111073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 27693392 - 27693439
Alignment:
Q  106 cataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| |||||| |||||||||||||||| ||||| |||||||||||    
T  27693392 cataagtacttgtgagactatttgagagaatttatggaaacaacttat 27693439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 8348366 - 8348292
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||||||||||||||||||  | |||| || || | | ||| ||||||||| |||| |||||||||||||||||    
T  8348366 acttattttagcttatctaccgatataatcatttttgatactgtttgagagagcttacgaaaacaacttataaca 8348292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 10353705 - 10353755
Alignment:
Q  97 atctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||||||||||||||||||| ||||| |||| |||| ||| ||||||||    
T  10353705 atctactaacataagcacttgtgagactgtttgggagagcttgtgaaaaca 10353755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 725586 - 725655
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| || ||||| |||||||||| |||| || |||  ||| |||||| ||||||||||||||||||    
T  725586 cttatttgagattatcaactaacataaacactcgtgagaacattcgagagagcttatgaaaacaacttat 725655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 2457092 - 2457035
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 129  Q
    ||||||||||  ||||||| || ||||||||  |||||||||||||||||||| ||||    
T  2457092 tgtttggattggcttatttgagattatctaccgacataagcacttgtaagactgtttg 2457035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 4081055 - 4080986
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| | |||||||||| |||||||  |||||   |||||||||||||  |||||||||||||||||    
T  4081055 cttatttaaacttatctactgacataagtgcttgtggcactatttgagagattttatgaaaacaacttat 4080986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 7945796 - 7945884
Alignment:
Q  64 tatggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||| ||||||| |||| |||||||  |||||||||||| ||||||||||| || | |   |||| ||||| |||||||||||||||||    
T  7945796 tatgggtttgtttagattgacttattg-agcttatctactgacataagcactcgtgacatggtttgggagaaattatgaaaacaacttat 7945884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 9559505 - 9559538
Alignment:
Q  120 agactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||||||||||||||||||    
T  9559505 agactatttgggagaacttatgaaaacaacttat 9559538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 22743631 - 22743551
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||||   |||||||| |||||||| ||| |||| | |||||||||||| || |||| || |||||||||||||||    
T  22743631 tgtttggattaggatattttagtttatctacaaac-taagaaattgtaagactatctgtgagagctcatgaaaacaacttat 22743551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 27924522 - 27924615
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata 165  Q
    ||||||||||| || |||| |||||| |||||  |||||||| || ||||||| | | |||||  ||||| ||||| |||||||||| ||||||    
T  27924522 tgtttggattagctcatttgagcttacctactggcataagcatttataagactttataagagagtttatgtaaacatcttataacacgtccata 27924615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 31338123 - 31338046
Alignment:
Q  77 ggattaacttattttagcttatctactaacataagcacttgtaagact-atttgagagaacttatgaaaacaacttat 153  Q
    ||||| |||||||| ||||||||||||| ||||||||| |  || |||  |||| |||| ||||||||||||||||||    
T  31338123 ggattgacttatttgagcttatctactagcataagcacgtacaaaactcttttgtgagagcttatgaaaacaacttat 31338046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 33068521 - 33068590
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 141  Q
    ||||||||||  ||||||| | |||||||||| ||||||||||||| || | | |||| |||||||||||    
T  33068521 tgtttggattggcttatttgaacttatctactgacataagcacttggaaaagtgtttgggagaacttatg 33068590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 33737721 - 33737640
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||| | |||||||  || ||||||| | |||||| |||||||   ||| |||||||||||||||||| |||||||||    
T  33737721 tgtttggaatgacttattcgagtttatctattgacataaacacttgtgcaactgtttgagagaacttatgaacacaacttat 33737640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 2458880 - 2458956
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||||| |||||| |||| || |||||||||| || ||||||||| | |||| ||| | ||| ||||||||||||    
T  2458880 ttgtttgggttaactaatttgagtttatctactagcaaaagcacttgcacgactgtttaaaagagcttatgaaaaca 2458956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 7901750 - 7901822
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaa 144  Q
    ||||||||||||||||||| || |||| || || ||||||| ||||| ||||| ||||  ||| |||||||||    
T  7901750 tgtttggattaacttatttgagtttatatagtatcataagcccttgtgagactgtttggaagagcttatgaaa 7901822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 10645346 - 10645382
Alignment:
Q  115 ttgtaagactatttgagagaacttatgaaaacaactt 151  Q
    |||||||||| |||| |||||||||||||||||||||    
T  10645346 ttgtaagactgtttgggagaacttatgaaaacaactt 10645382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 18611171 - 18611139
Alignment:
Q  126 tttgagagaacttatgaaaacaacttataacac 158  Q
    ||||||| |||||||||||||||||||||||||    
T  18611171 tttgagataacttatgaaaacaacttataacac 18611139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 24973948 - 24973996
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaaga 122  Q
    ||||||||| ||||||| | ||||||| || ||||||||||||||||||    
T  24973948 tttggattagcttatttgaacttatctgctgacataagcacttgtaaga 24973996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 27857496 - 27857428
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| || ||||||||| |||||  ||||||| | ||| |||| |||| ||||||||||||||||||    
T  27857496 ttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttat 27857428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 31668474 - 31668430
Alignment:
Q  106 cataagcacttgtaagactatttgagagaacttatgaaaacaact 150  Q
    ||||| ||||||| |||||||| |||||| |||||||||||||||    
T  31668474 cataaacacttgtgagactattagagagagcttatgaaaacaact 31668430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 27123271 - 27123397
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttga 170  Q
    ||||||||||||||||||| |||||||  |||| |||||| |||||| ||||| ||||||||| |||||| ||||||||||| |||  ||  | |||||     
T  27123271 tgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgt 27123370  T
Q  171 tttcattttatttccataagctctcca 197  Q
    |||||  ||||||||||||||||||||    
T  27123371 tttcaacttatttccataagctctcca 27123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 56186816 - 56186958
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatg---aaaacaacttataacacatccat-ag 166  Q
    |||||||||||||||||||  || |||||||||||||||| ||||||| |||||||| |||| |||||| |   | |||||||||||||| || ||| ||    
T  56186816 ttgtttggattaacttattcgagtttatctactaacataaacacttgtgagactattcgagaaaacttacggaaacaacaacttataacatattcataag 56186915  T
Q  167 ttgatttcattttatttccataagctctccagggtaacttatg 209  Q
    |||  || |  ||||||||||||||||||| || |||||||||    
T  56186916 ttgtattaaacttatttccataagctctcccggataacttatg 56186958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 83 - 195
Target Start/End: Original strand, 33534099 - 33534212
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatttcattttat 181  Q
    |||||||| |||||||||| | ||||||| |||||| ||| ||||||||||| ||||||||||||| || | ||| |||||| ||||| |||||  ||||    
T  33534099 acttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccataagttgttttcagcttat 33534198  T
Q  182 ttccataagctctc 195  Q
    || |||||||||||    
T  33534199 tttcataagctctc 33534212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 214
Target Start/End: Original strand, 18628486 - 18628605
Alignment:
Q  86 tattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccatagttgatttcattttatttcc 185  Q
    ||||| |||||||||||| |||||| ||||||| ||||| |||| |||| |||||||||||||||||| |         ||||| |||||  ||||||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga---------agttgttttcagcttatttcc 18628576  T
Q  186 ataagctctccagggtaacttatgtaaac 214  Q
    |||||||||||| | ||||||||| ||||    
T  18628577 ataagctctccaagataacttatgaaaac 18628605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 6428171 - 6428046
Alignment:
Q  70 tttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agtt 168  Q
    |||||||| ||| |||||||| ||||||| || |   |||||||||||| ||||  |||||||||  ||||||||||||||||| |||  ||||| ||||    
T  6428171 tttgtttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataagtt 6428072  T
Q  169 gatttcattttatttccataagctct 194  Q
    ||||| |   ||||||||||||||||    
T  6428071 gatttaagcatatttccataagctct 6428046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 17822784 - 17822864
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||||||||||| |||||||||||| |||||||  | ||| |||||||||  |||||| |||||||||| |||||    
T  17822784 tgtttggattaacttatttgagcttatctactgacataagttc-tgtgagactatttaggagaacatatgaaaacagcttat 17822864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 53315477 - 53315400
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 149  Q
    |||||||||| |||||||| |||||||| |||   |||||||| | |||||||||||| |||| ||||||||||||||    
T  53315477 tgtttggattgacttatttgagcttatccactggtataagcacatataagactatttgtgagagcttatgaaaacaac 53315400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 4691986 - 4691918
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||||||||||||  || || ||||||| ||||||||||||| |||||||| |||||||||||    
T  4691986 ttatttgagcttatctactgtcacaatcacttgtgagactatttgagaaaacttatggaaacaacttat 4691918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 14011386 - 14011242
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttg 169  Q
    ||||||||||| |||| ||| | |||||||||| |||||||||| ||||| |||||||| |||| |||||| ||| |  |||| |||  ||  | || ||    
T  14011386 ttgtttggatttacttctttgaacttatctacttacataagcacatgtaaaactatttgggagagcttatgcaaagagtttatcacatgtctttaagctg 14011287  T
Q  170 atttcattttatttccataagctctccagggtaacttatgtaaac 214  Q
     |||||  |||||||||||||||||||| | || |||||||||||    
T  14011286 ttttcagcttatttccataagctctccaagatagcttatgtaaac 14011242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 28615494 - 28615411
Alignment:
Q  63 atatggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||| | |||||||||| |||||||| || |||||||||| ||||| ||||||| ||| | |||| |||||||||||||||||    
T  28615494 atatgggtctgtttggattgacttatttaagtttatctactagcataaacacttgtgagattgtttg-gagaacttatgaaaaca 28615411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 32421252 - 32421172
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactt 151  Q
    ||||||||||| |||||||| ||| |||  |||| |||||| |||||| |||||| ||||||||| |||||||| ||||||    
T  32421252 ttgtttggattgacttatttgagcatattcactagcataaggacttgtgagactacttgagagaagttatgaaatcaactt 32421172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 49940086 - 49940165
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    |||||||||| |||||||| |||||| || ||||||||||   |||| ||||| |||||||||||||||||||||| ||||    
T  49940086 tgtttggattgacttatttgagcttacctgctaacataagtt-ttgtgagactgtttgagagaacttatgaaaacagctta 49940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 2996718 - 2996643
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||| ||||||| | ||||| || | |||||||||||| | ||||| ||||||||| ||||||||||||||||||    
T  2996718 gattagcttatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttat 2996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 9720568 - 9720647
Alignment:
Q  67 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 146  Q
    |||| |||| ||||| |||||||| || ||||||||||||||||||||| |  ||||| ||||||| |||||||| ||||    
T  9720568 ggatctgttgggattgacttatttgagtttatctactaacataagcactagatagactgtttgagaaaacttatggaaac 9720647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 22471401 - 22471350
Alignment:
Q  96 tatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||||| |||||||||||||| ||||| |||| |||||||||||||||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttatgaaaaca 22471350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 242
Target Start/End: Complemental strand, 53943661 - 53943586
Alignment:
Q  167 ttgatttcattttatttccataagctctccagggtaacttatgtaaaccacccataggttatttgaaaacagttga 242  Q
    |||||||||  |||||||||||||||||||| |  ||||||||||||| ||  |||| |||| |||||||||||||    
T  53943661 ttgatttcagcttatttccataagctctccatgacaacttatgtaaacaacttatagtttatatgaaaacagttga 53943586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 18512434 - 18512492
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttga 130  Q
    ||||| ||||||||||||| |||||||||||| |||||| ||||||| |||||| ||||    
T  18512434 tgtttcgattaacttatttgagcttatctactgacataaacacttgtgagactagttga 18512492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 157
Target Start/End: Original strand, 37575854 - 37575940
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||||||||| |||||||| || |||||| ||| ||||| | || || | | | |||||||||||||||||||| |||||||||||    
T  37575854 ttgtttggattgacttatttgagtttatctgctagcataaactctcgtgacattgtttgagagaacttatgaaaataacttataaca 37575940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 3549486 - 3549547
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    |||||||||| ||||||| |  ||||||||||| | ||||| ||||||||||||||||||||    
T  3549486 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 3549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 21469848 - 21469909
Alignment:
Q  79 attaacttattttagcttatctactaacataagcac-ttgtaagactatttgagagaactta 139  Q
    |||| ||||||| ||||||||||| ||||||| ||| |||||| ||||||||||||||||||    
T  21469848 attagcttatttgagcttatctacaaacataaacactttgtaacactatttgagagaactta 21469909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 47399636 - 47399555
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| |||||||||||| | ||||| ||||  |||||  |||||| |||||  |||||||||||| ||||||||||||||    
T  47399636 tgtttgaattaacttatttgaacttatatactggcataaaaacttgtgagactgattgagagaacttgtgaaaacaacttat 47399555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 55870261 - 55870334
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||||||||||||||| || ||||||| | |||||| || |||| ||||| ||||||| | ||||||||||    
T  55870261 tgtttggattaacttatttgagtttatctaatgacataaacatttgtgagactctttgagatagcttatgaaaa 55870334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 4072016 - 4071948
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| || ||| ||| ||| |||||||||||| ||||| ||||||||| |||||||||||| |||||    
T  4072016 ttatttgaggttaactattaatataagcacttgtgagactgtttgagagagcttatgaaaacagcttat 4071948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 22662170 - 22662247
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| || |||||||||||||||||||||  ||| ||    || ||||||||||||||| |||||||    
T  22662170 tgtttggattgacttatttgagtttatctactaacataagcactcataacac----tgggagaacttatgaaaaaaacttat 22662247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 22666649 - 22666726
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| || |||||||||||||||||||||  ||| ||    || ||||||||||||||| |||||||    
T  22666649 tgtttggattgacttatttgagtttatctactaacataagcactcataacac----tgggagaacttatgaaaaaaacttat 22666726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 209
Target Start/End: Complemental strand, 29376052 - 29375917
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata-gttgatt 172  Q
    ||||||||  ||||||| | |||||||| | |||||||||||||| |  |||||| ||||| |||||| ||||| ||||| |||  ||||||  ||| ||    
T  29376052 tttggattggcttatttgaacttatctattgacataagcacttgtgacgctatttcagagagcttatggaaacagcttatgacaggtccatattttgttt 29375953  T
Q  173 tcattttatttccataagctctccagggtaacttatg 209  Q
    |||  ||||||||||||| |||||| | |||||||||    
T  29375952 tcaacttatttccataag-tctccacgataacttatg 29375917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 32831438 - 32831522
Alignment:
Q  73 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||||||||  || |||| |||||||||||| |||||||||||| | | ||  |||| ||||||  |||||||||||||||||||    
T  32831438 gtttggattggctcatttgagcttatctactgacataagcacttttgataccttttgggagaacagatgaaaacaacttataaca 32831522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 50298653 - 50298609
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttg 129  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||    
T  50298653 ttattttagcttatctactgacataagcacttgtgagactgtttg 50298609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 50742790 - 50742830
Alignment:
Q  107 ataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  50742790 ataagcacttgttagactgtttgagagaacttatgaaaaca 50742830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 158
Target Start/End: Complemental strand, 50746124 - 50746040
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacac 158  Q
    |||| ||| |||||||| || |||||||||  ||||||||||||| |||||||||| | ||  |||||||||||| |||| ||||    
T  50746124 tttgtattgacttatttgagtttatctacttgcataagcacttgtgagactatttgtgtgagtttatgaaaacaatttatgacac 50746040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 10365923 - 10365796
Alignment:
Q  75 ttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatcca-----tagttg 169  Q
    ||||||| |||||||| | |||||||||| |||||| |||| |  ||||||||||||| | |||||  |||||| ||||||||  ||||     ||||||    
T  10365923 ttggattgacttatttaatcttatctactgacataaacactggagagactatttgagacagcttatcgaaacaaattataacatgtccataagttagttg 10365824  T
Q  170 atttcattttatttccataagctctcca 197  Q
     |||||  ||||||||||||| ||||||    
T  10365823 ctttcagcttatttccataaggtctcca 10365796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 24091608 - 24091533
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| |||||| || |||||||||||||||| ||||||  | ||| |||  ||||||||||| |||||||||||    
T  24091608 gattaatttatttgagtttatctactaacataaacacttgccaaactgttttggagaacttatggaaacaacttat 24091533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 39178184 - 39178259
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 146  Q
    ||||||||||| || ||||| ||| |||||||| |||||| ||||| | | ||| |||| ||||||||||||||||    
T  39178184 ttgtttggattgacgtatttaagcatatctactgacataaacacttttgacactgtttgggagaacttatgaaaac 39178259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 46860066 - 46859999
Alignment:
Q  75 ttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatga 142  Q
    ||||||| |||||||| | |||||||| | |||||||||||||| | ||| ||||||||| |||||||    
T  46860066 ttggattgacttatttgaacttatctattcacataagcacttgtgaaactgtttgagagagcttatga 46859999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 27725354 - 27725284
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||| |||||||||||| | |||||||| | || |||| ||||||||| |||||| ||| |||||||    
T  27725354 acttatttgagcttatctactgagataagcacatatacgactgtttgagagagcttatggaaataacttat 27725284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 32420979 - 32421029
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagact 124  Q
    |||||||| |||||||| |||||| |||||| ||||||||||||| |||||    
T  32420979 tttggattgacttatttgagcttacctactagcataagcacttgtgagact 32421029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 37863893 - 37863959
Alignment:
Q  92 agcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacac 158  Q
    ||||||| ||||  ||| ||||| || || |||||||||||||||||||||||||| ||||| ||||    
T  37863893 agcttatgtactggcattagcacatgcaaaactatttgagagaacttatgaaaacagcttatgacac 37863959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 49003973 - 49004042
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttata 154  Q
    ||||||| ||||||||||||| | ||||   |||| |||||||||||||||||||||||||| || |||||    
T  49003973 cttatttgagcttatctactagcttaagtt-ttgtgagactatttgagagaacttatgaaaataagttata 49004042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 1137804 - 1137739
Alignment:
Q  131 gagaacttatgaaaacaacttataacacatccata-gttgatttcattttatttccataagctctc 195  Q
    ||||||||||||||||| ||||| |||  | |||| |||| ||||| |||||||||||||||||||    
T  1137804 gagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctctc 1137739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 13126495 - 13126575
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||  |||||||||||||| |||||||||||||   |||| ||||| ||||  ||||||||| |||||| |||||    
T  13126495 tgtttggattggcttattttagcttacctactaacataag-ttttgtgagactgtttggaagaacttataaaaacagcttat 13126575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 17975256 - 17975313
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 129  Q
    |||||||||| |||||||| ||||||||||| |||| || ||||||| | ||||||||    
T  17975256 tgtttggattgacttatttgagcttatctaccaacacaaacacttgtcaaactatttg 17975313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 21157907 - 21157862
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttg 129  Q
    ||||||| |||| ||||||| |||||||||||||||||||| ||||    
T  21157907 cttatttgagctcatctactgacataagcacttgtaagactgtttg 21157862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 24087483 - 24087406
Alignment:
Q  76 tggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||| || |||||| || |||||||||||||||| ||||||  | ||| |||  ||||||||||| |||||||||||    
T  24087483 tggatcaatttatttgagtttatctactaacataaacacttgccaaactgttttggagaacttatggaaacaacttat 24087406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 24160450 - 24160523
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||||| |||||||| |||||||| ||  | ||||| |||||| ||| |||||| | |||||||||||||||    
T  24160450 tttggatttacttatttgagcttatcaacagatataagtacttgtgagattatttgggtgaacttatgaaaaca 24160523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 45214473 - 45214436
Alignment:
Q  121 gactatttgagagaacttatgaaaacaacttataacac 158  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  45214473 gactatttgagagaacttatgaaatcaacttatgacac 45214436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 49939882 - 49939942
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||| ||||||||||||| |||||||  |||| ||||||||||  ||||||||||||||    
T  49939882 cttatttaagcttatctactagcataagc-tttgtgagactatttggaagaacttatgaaaa 49939942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 51560228 - 51560289
Alignment:
Q  92 agcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||||  ||||||||||| | ||||| |||| |||| |||||||||||| |||||    
T  51560228 agcttatctactggcataagcacttatgagactctttgggagaccttatgaaaacaccttat 51560289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 1554940 - 1555000
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    |||||| |||||||||||||   |||| ||||| |||||| |||||||||| |||||||||    
T  1554940 ttatttgagcttatctactacactaagaacttgcaagactgtttgagagaatttatgaaaa 1555000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 25487482 - 25487526
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaaga 122  Q
    ||||||||||||| || ||||||| || |||||||||||||||||    
T  25487482 gattaacttatttgagtttatctattagcataagcacttgtaaga 25487526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 27122082 - 27122158
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||||| |||||| |||| || |||||||||| || ||||||||| | |||| ||| | ||| ||||||||||||    
T  27122082 ttgtttgggttaactaatttgagtttatctactagcaaaagcacttgcacgactgtttaaaagagcttatgaaaaca 27122158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 37636107 - 37636167
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagaga 134  Q
    |||||||| | |||||| || |||||||||||||||||||| ||||| ||| |||| ||||    
T  37636107 tttggattgatttatttgagtttatctactaacataagcacctgtaaaactgtttgggaga 37636167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 195
Target Start/End: Original strand, 10199330 - 10199451
Alignment:
Q  75 ttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgattt 173  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| | |||||||| ||||||| ||||||| | ||||| |||  | ||| ||||| |||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataagttgtttt 10199429  T
Q  174 cattttatttccataagctctc 195  Q
    ||  |||||| |||||||||||    
T  10199430 cagcttattttcataagctctc 10199451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 6659830 - 6659754
Alignment:
Q  73 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 149  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||| || | ||||||| ||||||    
T  6659830 gtttggattgacttattttagcttatctactagcataagcacttgtgagactatttgggatagcttatgataacaac 6659754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 50644173 - 50644253
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    ||||||||||| |||||||| |||||||||||||||||| |   |||| ||||| |||| ||||||||||||||||||||||    
T  50644173 ttgtttggattgacttatttgagcttatctactaacatatg-ttttgtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 4757487 - 4757408
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||| || |||||||| |||||||||| | |||||| ||||||| |||| |||||  ||||||||||||||||||||||    
T  4757487 tttggtttgacttatttgagcttatctattgacataaacacttgtgagaccatttggcagaacttatgaaaacaacttat 4757408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 18327067 - 18327146
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||  ||||||| ||||||||||||  ||||||||||| | | ||||||||  ||||||||||||||||||||||    
T  18327067 tttggattggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaacaacttat 18327146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 32515360 - 32515435
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    ||||||||||| | ||||| || |||||||||||||||||||||||| ||||| |||| |||| |||||| |||||    
T  32515360 tgtttggattagcatatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaaca 32515435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 51929383 - 51929462
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||| |||| ||| |||||||||||| |||||||||| ||| | ||| ||| |||||||||||||||||| |||||    
T  51929383 tttggattgacttttttgagcttatctactgacataagcacctgtgacactgtttaagagaacttatgaaaacagcttat 51929462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 16980943 - 16980874
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    |||||||| | ||||| ||| |||||||| |||||| ||||||||||||||| |||||| ||||||||||    
T  16980943 acttatttgaacttatataccaacataagtacttgtgagactatttgagagagcttatggaaacaactta 16980874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 9602575 - 9602630
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 129  Q
    |||||||| |||||| | ||||||||||||||| ||||||||||| ||||||||||    
T  9602575 tttggattgacttatctgagcttatctactaacttaagcacttgtgagactatttg 9602630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 15581403 - 15581324
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| || |||||||||||||||||||| |||||||||||||| ||| | ||||  ||| || ||| |||||||||||    
T  15581403 tttggaatagcttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttat 15581324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 214
Target Start/End: Original strand, 33723301 - 33723444
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttga 170  Q
    |||||||||| |||||||| | ||||||||||| ||||| ||||||| |||||  ||| || |||||||| ||||| || || |||  | ||| || ||     
T  33723301 tgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcatgagatgt 33723400  T
Q  171 tttcattttatttccataagctctccagggtaacttatgtaaac 214  Q
    |||||  ||||||||||||||| | ||||||| |||||| ||||    
T  33723401 tttcagcttatttccataagctttacagggtagcttatgaaaac 33723444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 6292645 - 6292599
Alignment:
Q  70 tttgtttggattaacttattttagcttatctactaacataagcactt 116  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||    
T  6292645 tttgtttggattgacttatttgagcttatctactgacataagcactt 6292599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 6557112 - 6557051
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    |||||||| | ||||||||||||||||||   |||| ||||||||||||||||||||||||||    
T  6557112 acttatttgaacttatctactaacataagtt-ttgtgagactatttgagagaacttatgaaaa 6557051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 28075844 - 28075774
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||| |||||||||||||| ||||| |||||| || || ||||||  ||||| ||||||||||||||    
T  28075844 acttatttgagcttatctactaatataagaacttgtgaggctgtttgagttaacttgtgaaaacaacttat 28075774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 31517671 - 31517737
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 150  Q
    ||||||| ||||||| ||||  ||||||||||||| ||||| |||| |||||||||| |||||||||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaact 31517737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 601191 - 601110
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| ||||| || |||||||||  |||||||||||||| | ||||| |||| |||||  || |||||||||||||    
T  601191 tgtttggattgacttacttgagcttatctgataacataagcacttttgagactgtttgggagaatctaagaaaacaacttat 601110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 4200379 - 4200303
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttata 154  Q
    |||| ||||||||||| |||| |||| | ||||||| |||| ||||| |||| |||| || ||||||||||||||||    
T  4200379 gattgacttattttagtttatatactgatataagcatttgtgagactgtttgtgagagctaatgaaaacaacttata 4200303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 14737658 - 14737730
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||||| ||||||| |||||  |||||||||||| ||||| |||| || ||||| |||||| |||||||||||    
T  14737658 ttatttgagcttatttactagaataagcacttgtgagactgtttgggaaaacttgtgaaaataacttataaca 14737730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 24417655 - 24417735
Alignment:
Q  73 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||| |||||||| || ||||||| ||| ||||| |||||| ||||||||||| ||||  | | ||||||||||||    
T  24417655 gtttggattgacttatttgagtttatctattaatataagtacttgtgagactatttgaaagaatgtgtaaaaacaacttat 24417735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 33975727 - 33975679
Alignment:
Q  70 tttgtttggattaacttattttagcttatctactaacataagcacttgt 118  Q
    ||||||||| || |||||||| |||||||||||||||| ||||||||||    
T  33975727 tttgtttgggttcacttatttgagcttatctactaacacaagcacttgt 33975679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 36070298 - 36070250
Alignment:
Q  106 cataagcacttgtaagactatttgagagaacttatgaaaacaacttata 154  Q
    ||||||||||||| ||||| |||  ||||||||||||||||||||||||    
T  36070298 cataagcacttgtgagactgtttaggagaacttatgaaaacaacttata 36070250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 2832120 - 2832077
Alignment:
Q  75 ttggattaacttattttagcttatctactaacataagcacttgt 118  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||    
T  2832120 ttggattagcttatttgagcttatctactagcataagcacttgt 2832077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 3110130 - 3110019
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatttcattttatt 182  Q
    ||||||| |||||| ||| | ||||||||||||   ||||| ||||  |||||||||| ||||||||| | |||||||||| | ||| ||||   |||||    
T  3110130 cttatttgagcttaactagtgacataagcacttccgagactgtttgtaagaacttatgcaaacaacttgtgacacatccataacttgttttccgcttatt 3110031  T
Q  183 tccataagctct 194  Q
    ||||||||||||    
T  3110030 tccataagctct 3110019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 11217944 - 11218015
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttata 154  Q
    |||||||| |||| ||||||| |||| ||||||||| ||||  |||| |||||||  |||||||||||||||    
T  11217944 acttatttgagctaatctactgacatgagcacttgtgagacggtttgggagaactggtgaaaacaacttata 11218015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 43371844 - 43371891
Alignment:
Q  106 cataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||||| ||||| ||||||||| |||||||||||| |||||    
T  43371844 cataagcacttgtgagactgtttgagagagcttatgaaaacagcttat 43371891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 49282635 - 49282712
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||| ||||||| || || ||||||||||||| ||||||| ||||||| ||| ||| |||||||||||| |||||    
T  49282635 tttggattagcttatttgag-ttgtctactaacataaacacttgtgagactatctga-agagcttatgaaaacagcttat 49282712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 8382459 - 8382417
Alignment:
Q  105 acataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||    
T  8382459 acataagcatttgtgagactctttgagagaacttatgaaaaca 8382417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 10439839 - 10439709
Alignment:
Q  70 tttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccatagt-t 168  Q
    |||||||| ||| |||||||| ||||||| ||    ||||||  ||||| |||||||||| |||| |||||||||||||  ||| |||  |||||| | |    
T  10439839 tttgtttgaattgacttatttgagcttatttatggccataagatcttgtgagactatttgggagagcttatgaaaacaaactatgacatgtccataatct 10439740  T
Q  169 gatttcattttatttccataagctctccagg 199  Q
    | |||||  |||||||||||| |||||||||    
T  10439739 gctttcagcttatttccataaactctccagg 10439709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 26866464 - 26866390
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 146  Q
    |||||||||| |||||||| |||||||||||||||| ||  |||| | ||||||||||  ||| |||||| ||||    
T  26866464 tgtttggattgacttatttcagcttatctactaacacaaatacttctgagactatttggaagagcttatggaaac 26866390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 42336731 - 42336685
Alignment:
Q  107 ataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||||  |||| ||||||| ||||||||||||||||||||    
T  42336731 ataagcacttgtgcgactgtttgagataacttatgaaaacaacttat 42336685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 49692005 - 49692067
Alignment:
Q  106 cataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccatagtt 168  Q
    |||||| |||||| ||||| |||||||||||||||||||| | ||||| |||  |||||||||    
T  49692005 cataagaacttgtgagactgtttgagagaacttatgaaaatagcttatgacatgtccatagtt 49692067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 1662712 - 1662643
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| ||||||||||||| |||||| || ||  |||||||||| |||| |||| | |||||||||||    
T  1662712 cttatttgagcttatctactagcataagtacatgcgagactatttgcgagagcttacggaaacaacttat 1662643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 4180651 - 4180720
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttat 140  Q
    ||||||||||||||||| ||| |||||| ||||  ||||| ||||||| ||| |||||| |||| |||||    
T  4180651 ttgtttggattaacttacttttgcttatttacttgcataaccacttgtcagattatttgtgagagcttat 4180720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 28837284 - 28837352
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| |||||||||||| |||||||||||||  ||||| ||| |||| ||||| ||||||| |||||    
T  28837284 cttatttgagcttatctactgacataagcacttgagagactgtttaagag-acttacgaaaacagcttat 28837352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 29793619 - 29793672
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatt 127  Q
    |||| ||| |||||||| |||||||||||| |||||| ||||||| ||||||||    
T  29793619 tttgtattgacttatttgagcttatctactgacataaacacttgtgagactatt 29793672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 43420409 - 43420328
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||| |||||| ||||||| |||||||||||  |||||| ||||||| |||||  ||| |||| |||||| ||||| |||||    
T  43420409 tgttaggattagcttatttgagcttatctacagacataaacacttgtgagactgcttgtgagatcttatggaaacagcttat 43420328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 5591897 - 5592004
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatttcattttat 181  Q
    |||||||| ||||||||||||   |||||||  |||| |||| ||||||||| |||||||||||| ||||| |||| | ||| ||  | ||||| |||||    
T  5591897 acttatttgagcttatctactggtataagcatgtgta-gactgtttgagagagcttatgaaaacagcttatgacacgtgcataagccgttttcaatttat 5591995  T
Q  182 ttccataag 190  Q
    |||||||||    
T  5591996 ttccataag 5592004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 6279539 - 6279475
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||||||| |||||| ||||| ||||||||||||||  | || ||||||||| |||||| |||||    
T  6279539 acttatttcagcttaactactgacataagcacttgtgtggctgtttgagagagcttatggaaaca 6279475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 7252541 - 7252609
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatga 142  Q
    |||| |||| ||||||| |||| ||||||||||||||| |||||  | ||| |||| ||||||||||||    
T  7252541 tttgaattagcttatttgagctaatctactaacataagtacttgagaaactgtttgggagaacttatga 7252609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 27140623 - 27140503
Alignment:
Q  78 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccata-gttgatttcat 176  Q
    |||| |||||| | |||||||||| | |||||| || ||||||| || |||||||||  ||| | ||||| ||||| |||  |||||| |||| |||||     
T  27140623 gattgacttatatgagcttatctattgacataaacaattgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcag 27140524  T
Q  177 tttatttccataagctctcca 197  Q
     |||||| |||||||||||||    
T  27140523 cttatttgcataagctctcca 27140503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 40485717 - 40485773
Alignment:
Q  97 atctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| |||||||||||||| ||||| |||| ||||||||||  ||||| |||||    
T  40485717 atctacttacataagcacttgtgagactgtttgggagaacttattgaaacatcttat 40485773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 44217502 - 44217454
Alignment:
Q  92 agcttatctactaacataagcacttgtaagactatttgagagaacttat 140  Q
    |||||||||||| || ||||||||||||||||| |||| |||| |||||    
T  44217502 agcttatctactgacgtaagcacttgtaagactttttgggagagcttat 44217454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 49173499 - 49173463
Alignment:
Q  109 aagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    |||||||||| |||||||||||||||||||| |||||    
T  49173499 aagcacttgtgagactatttgagagaacttacgaaaa 49173463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 50725372 - 50725336
Alignment:
Q  75 ttggattaacttattttagcttatctactaacataag 111  Q
    |||||||||||||||||||||||||||| || |||||    
T  50725372 ttggattaacttattttagcttatctacgaaaataag 50725336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 207
Target Start/End: Complemental strand, 32849327 - 32849196
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatt 172  Q
    |||| ||| |||||||| ||||||||||||| ||||||||||||| || || |||| ||||||||||||||| ||||||| |||||  ||| || || ||    
T  32849327 tttgaattgacttatttaagcttatctactatcataagcacttgtgaggctgtttgggagaacttatgaaaaaaacttatgacaca--cataagctgttt 32849230  T
Q  173 tcattttatttccataagctctccagggtaactta 207  Q
    ||| |||| ||||||| |||||||||| |||||||    
T  32849229 tcagttta-ttccatatgctctccaggataactta 32849196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 8090082 - 8090006
Alignment:
Q  77 ggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||| |||||||| | |||||||||||||| ||||||| |  ||||||||||||||| ||||||||||||||||||    
T  8090082 ggattgacttatttgaacttatctactaacacaagcactcgcgagactatttgagagagcttatgaaaacaacttat 8090006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 10638454 - 10638521
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaactta 139  Q
    |||||||||| |||||||| || |||||||| |||||||||||||||||||||||||| |||| ||||    
T  10638454 tgtttggattgacttatttaagattatctaccaacataagcacttgtaagactatttgggagagctta 10638521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 499650 - 499731
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| |||||| ||||| |||||||||| ||| || || |||| ||||||||||||||||| |||||    
T  499650 tgtttggattgacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttat 499731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 12459920 - 12460001
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| ||||||||  |||||||| || |||||||||| ||| ||||| |||| |||||| ||||||||||||||||    
T  12459920 tgtttggattgacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttat 12460001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 11105057 - 11104981
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    ||||||||||| | |||||| |||||||| || | ||||||||||||| | |||||||| |||||||||||||||||    
T  11105057 ttgtttggattgatttatttgagcttatcaaccagcataagcacttgtgatactatttgggagaacttatgaaaaca 11104981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 5377115 - 5377197
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||| |||||  ||||||| |||||||||| | |||||||||||||||||||| || | || |||||||||||||| |||||    
T  5377115 ttgttcggattggcttatttgagcttatctattgacataagcacttgtaagactgttagcgataacttatgaaaacagcttat 5377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 10125649 - 10125775
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatttcattttatt 182  Q
    ||||||| |||||||||||| |||| ||||||||| | | | | |||||||||||||| ||||||||||| |||  |  || || || |||||  |||||    
T  10125649 cttatttaagcttatctactgacatgagcacttgtgacattgtctgagagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttatt 10125748  T
Q  183 tccataagctctccagggtaacttatg 209  Q
    | ||||||||||||| |||||||||||    
T  10125749 ttcataagctctccatggtaacttatg 10125775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 26004916 - 26004962
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgt 118  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||    
T  26004916 tgtttggattgacttattttagcttatctactagcataagcacttgt 26004962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 42647041 - 42646969
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||||||  ||||||| |||||||||||| |||| |||||||| |||||||||||  ||||||||||||||    
T  42647041 tgtttggattggcttatttgagcttatctactgacattagcacttg-aagactatttggaagaacttatgaaaa 42646969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 11297115 - 11297195
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    |||||| ||| |||||||| |||||||||| |  ||||| ||||||||||||| ||||| ||| |||||| ||||||||||    
T  11297115 tgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaactta 11297195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 14599291 - 14599375
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 156  Q
    |||||||||| | |||||| | ||||| ||||| ||||| ||||||||||| | ||||||||| |||||  ||||||||||||||    
T  14599291 tgtttggattcagttatttgaacttatttactagcataaacacttgtaagattgtttgagagagcttatcgaaacaacttataac 14599375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 25705578 - 25705624
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgt 118  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||    
T  25705578 tgtttggattaaattatttgaacttatctactaacataagcacttgt 25705624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 35135571 - 35135649
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 150  Q
    ||||||||||||||||||| ||||| |||||| |||||| ||||||| | |||||| | |||| | |||| ||||||||    
T  35135571 tgtttggattaacttatttcagcttctctactgacataaccacttgtgatactattcgggagagcctatggaaacaact 35135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 36639673 - 36639600
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||||||  ||||||| | |||| ||| | |||||||||||| ||||||| |||||||||||||| |||||    
T  36639673 tgtttggattgtcttatttgaacttacctatttacataagcacttataagactgtttgagagaacttacgaaaa 36639600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 25720336 - 25720412
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaa 148  Q
    |||||| |||| ||||||| || |||||||||  ||||||||||||| ||||| | ||||||| ||||| |||||||    
T  25720336 tgtttgaattagcttatttgaggttatctactggcataagcacttgtgagactgtctgagagagcttataaaaacaa 25720412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 39257325 - 39257365
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagact 124  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  39257325 cttatttaagcttatctactaacataagcacttgtgagact 39257365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 17259348 - 17259289
Alignment:
Q  92 agcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactt 151  Q
    ||||||||||||||||||||||||||| |||||  ||||| || ||| || |||||||||    
T  17259348 agcttatctactaacataagcacttgtgagacttgttgagtgagcttttggaaacaactt 17259289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 37969017 - 37968955
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    |||| ||| |||||||||||| ||||||| |||||| | ||| ||||||||| ||||||||||    
T  37969017 acttgtttgagcttatctactgacataagtacttgtgaaactgtttgagagatcttatgaaaa 37968955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 15015982 - 15015922
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||| |||||||||||| ||||||||  |||| ||||| |||| |||||||||||||||    
T  15015982 cttatttgagcttatctactgacataagc-tttgtgagactgtttgggagaacttatgaaaa 15015922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 17258814 - 17258875
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||| |||||||| |||||||||||||||||| | | | |||| |||||| ||||||||    
T  17258814 cttatttgagcttatcaactaacataagcacttgtgacattctttgggagaacctatgaaaa 17258875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 35445763 - 35445847
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||||||| | ||||||| || ||||||||| |||||||   |||| ||||| ||||| |||| ||||||||||| |||||||||    
T  35445763 tgtttggatcatcttatttgagtttatctactgacataagtt-ttgtgagactctttgacagaatttatgaaaacagcttataaca 35445847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 35960564 - 35960484
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    |||||||| ||||||||||| |||||||| | |  |||||||| | || ||||||||||||||| |||||| || |||||||    
T  35960564 ttgtttgggttaacttatttgagcttatcaattggcataagcaat-gtcagactatttgagagagcttatggaagcaactta 35960484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 36796625 - 36796678
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagact 124  Q
    ||||||||||| |||||||| |||||||||| | |||||| ||||||| |||||    
T  36796625 ttgtttggattgacttatttgagcttatctaatgacataaacacttgtgagact 36796678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 11095427 - 11095495
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| |||||||||||| |||||| ||||||| | | | ||||||||||||| || ||||| |||||    
T  11095427 ttatttaagcttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttat 11095495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 11615575 - 11615619
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgt 118  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||||    
T  11615575 tttggattggcttatttgagcttatctactaacataaacacttgt 11615619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 197
Target Start/End: Complemental strand, 14980658 - 14980535
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttgatt 172  Q
    |||||| | |||||||| ||||||||||||  ||||||||||    ||||| ||||||||| ||||| ||||  |||||| |||  | ||| ||||| ||    
T  14980658 tttggaatgacttatttgagcttatctactggcataagcactatagagactgtttgagagagcttataaaaatgacttatgacatgtacataagttg-tt 14980560  T
Q  173 tcattttatttccataagctctcca 197  Q
    || | ||||||||||||||||||||    
T  14980559 tcgtcttatttccataagctctcca 14980535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 26796490 - 26796423
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||||||| ||||||||||| ||||| ||| | |||||| ||||||||| | |||||||||||    
T  26796490 ttatttgagcttatgtactaacataaacacttctaacattatttg-gagaacttaaggaaacaacttat 26796423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 32172791 - 32172723
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||||||| ||||| ||||||||||||| |||   |||| |||| |||||| |||||||||||    
T  32172791 ttatttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttat 32172723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 42034211 - 42034167
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcactt 116  Q
    ||||||||||| ||||||| |||||| ||||| ||||||||||||    
T  42034211 tgtttggattagcttatttgagcttacctactgacataagcactt 42034167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 8094445 - 8094376
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||||||  ||||||||||| |||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagagattttatgaaaacagcttat 8094376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 23215006 - 23214925
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| | ||||||||||| ||||| ||||| | ||||| |||||||||| |||||||||||||||||    
T  23215006 tgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttat 23214925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 33894778 - 33894650
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttga 170  Q
    ||||||||||| ||||||| |||||||| | | |||||||||||||| ||||| |||| |||| |||||||||||| | ||| |||  ||||| |||||     
T  33894778 tgtttggattagcttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgt 33894679  T
Q  171 tttcattttatttccataagctctccagg 199  Q
    |||||  ||||||| |||| || ||||||    
T  33894678 tttcagcttatttcaataaactttccagg 33894650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 25670516 - 25670586
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||| || |||||||||| | |||||||| ||||| ||||| ||||||| ||||||||||||||||||||    
T  25670516 acttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttat 25670586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 4970711 - 4970791
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||||||| |||||||| |||||||||  | |||||||  ||||| ||||| |||| |||||||||||||||||||||||    
T  4970711 tgtttggattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgggagaacttatgaaaacaacttat 4970791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 30748953 - 30749038
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||||| ||| | |||||| |||||||||||| ||||||||   ||| ||||| |||||||||||||||||||||||  |||||||    
T  30748953 tgtttgaattgagttatttgagcttatctactgacataagccaatgtgagactgtttgagagaacttatgaaaacaatctataaca 30749038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 13960648 - 13960727
Alignment:
Q  77 ggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    ||||| |||||||| |||||||| | |  ||||||||||||  ||||||||||||||| |||||||||||| |||||||||    
T  13960648 ggattgacttatttgagcttatccattg-cataagcacttgcgagactatttgagagagcttatgaaaacagcttataaca 13960727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 30751670 - 30751602
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttat 140  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||  |||| |||| |||| |||||    
T  30751670 tgtttggattaacttatttaaacttatctactgacataagcacttgtgcgactgtttgggagagcttat 30751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 46091742 - 46091662
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttata 154  Q
    ||||||||||||||||| |||| ||||| ||  ||||||| |||| |||||| |||| |||||||||||||| || |||||    
T  46091742 tttggattaacttatttgagctcatctaatagtataagcatttgtgagactaattgatagaacttatgaaaataatttata 46091662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 529510 - 529443
Alignment:
Q  75 ttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatga 142  Q
    ||||||| |||||||| ||||||||||||  ||||| ||||||| || ||||||| ||||||||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgaggctatttgggagaacttatga 529443  T

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Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 214
Target Start/End: Original strand, 28691755 - 28691897
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatccat-agttga 170  Q
    |||||||||| |||||||| || |||||| |||||||||||| |||| ||||| || | |||| |||||||||||| ||||| ||   ||||| | |||     
T  28691755 tgtttggattgacttatttgagtttatctgctaacataagcatttgtgagactgttcg-gagatcttatgaaaacagcttatgacttgtccataaattgt 28691853  T
Q  171 tttcattttatttccataagctctccagggtaacttatgtaaac 214  Q
    | ||| ||||||| |||||| |||||||| || |||||| ||||    
T  28691854 tatcagtttattttcataagatctccaggatagcttatgaaaac 28691897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 8427162 - 8427084
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 152  Q
    |||||||| | |||||| |||||||||||||||||||| |||||| ||||| |||| | || | |||| ||||||||||    
T  8427162 tttggattgatttatttgagcttatctactaacataagtacttgtgagactgtttgggggagcctatggaaacaactta 8427084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 29363664 - 29363607
Alignment:
Q  67 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagact 124  Q
    |||| ||||||||||  ||||||| | ||||||||||||||||||||||||| |||||    
T  29363664 ggatctgtttggattggcttatttgaacttatctactaacataagcacttgtgagact 29363607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 43854972 - 43855037
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 149  Q
    ||||||| | |||||||||||||||||||| |||  | |||||||| |||| ||||||||||||||    
T  43854972 cttatttgaacttatctactaacataagcatttgcgacactatttgggagagcttatgaaaacaac 43855037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 44151406 - 44151471
Alignment:
Q  83 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaa 148  Q
    |||||||| | ||||| |||| ||||||| |||||| ||| ||||||||||| |||||||||||||    
T  44151406 acttatttgaacttatatactgacataagtacttgtgagattatttgagagagcttatgaaaacaa 44151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 74 - 214
Target Start/End: Original strand, 44615025 - 44615166
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataacacatcca-tagttgatt 172  Q
    ||||||||  |||| || ||||||||||||| ||||| |||||| || ||| ||   |||| |||||||||||||||||| |||  ||||  || || ||    
T  44615025 tttggattgccttaattgagcttatctactagcataaccacttgcaaaactgttcaggagagcttatgaaaacaacttatgacatgtccacaagctgttt 44615124  T
Q  173 tcattttatttccataagctctccagggtaacttatgtaaac 214  Q
    |||  |||||||||||| ||||| ||| ||||||||| ||||    
T  44615125 tcacgttatttccataaactctcaaggctaacttatgaaaac 44615166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 2825168 - 2825236
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| |||||||||||| | |||||||||||| ||||| ||||  ||||||||||||| || |||||    
T  2825168 ttatttgagcttatctacttatataagcacttgtgagactctttggaagaacttatgaaaccatcttat 2825236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 753108 - 753045
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    ||||||| ||||||||||||  ||||||||| | |||||||  |||| ||||||||||||||||    
T  753108 cttatttgagcttatctacttgcataagcacctctaagactgattgaaagaacttatgaaaaca 753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 3836604 - 3836675
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 145  Q
    ||||||||  ||||||| ||||||||||||  | ||||||||||| | ||| |||| |||||||||||||||    
T  3836604 tttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaa 3836675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 30496842 - 30496775
Alignment:
Q  86 tattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||| || |||||||||| ||||||| ||||  |||||| |||||||| |||||||||||| |||||    
T  30496842 tatttgagtttatctactagcataagcccttgcgagactacttgagagagcttatgaaaacagcttat 30496775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 17942222 - 17942144
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 150  Q
    |||||||| | |||| ||| ||||||||||||   |||| ||| ||| ||||| | |||||||||||||||||||||||    
T  17942222 tgtttggaatgacttgtttgagcttatctactgcaataaacacctgtgagactgtctgagagaacttatgaaaacaact 17942144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 17988951 - 17988997
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttg 117  Q
    |||||||||||||||||||| ||||||||||||  ||||| ||||||    
T  17988951 ttgtttggattaacttatttgagcttatctactcgcataatcacttg 17988997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 22387814 - 22387896
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||||||| ||||| |  | ||||| |||| |||||| ||| ||| ||||| |||| |||| ||||||||||||||||||    
T  22387814 ttgtttggattgacttactagaacttatttactgacataaacacgtgtgagactgtttgggagagcttatgaaaacaacttat 22387896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 22940017 - 22940059
Alignment:
Q  115 ttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||| ||||||||||  ||||||||||||||||||||||||||    
T  22940017 ttgtgagactatttggaagaacttatgaaaacaacttataaca 22940059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 25659805 - 25659843
Alignment:
Q  73 gtttggattaacttattttagcttatctactaacataag 111  Q
    |||||||||||||||||| || |||||||||||||||||    
T  25659805 gtttggattaacttatttgagattatctactaacataag 25659843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 33678889 - 33678847
Alignment:
Q  115 ttgtaagactatttgagagaacttatgaaaacaacttataaca 157  Q
    |||| |||| ||||| |||||||||||||||||||||||||||    
T  33678889 ttgtgagacaatttgggagaacttatgaaaacaacttataaca 33678847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 47041953 - 47042027
Alignment:
Q  67 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 141  Q
    ||||||||||||||| |||||||| ||| |||||| | |||| | ||||||| ||||| |||| |||| ||||||    
T  47041953 ggatttgtttggattgacttatttgagcatatctattgacattaacacttgtgagactttttgtgagagcttatg 47042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 1418571 - 1418526
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcactt 116  Q
    ||||||||||| |||||||| ||||||||||||  |||||||||||    
T  1418571 ttgtttggattgacttatttgagcttatctactggcataagcactt 1418526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 19302482 - 19302562
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||| |||||||| |||||||||||| |||||||   |||| ||| |||||| ||||| ||||||||||| |||||    
T  19302482 tgtttgaattgacttatttgagcttatctactgacataag-ttttgtgagaatatttgggagaatttatgaaaacagcttat 19302562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 21073285 - 21073232
Alignment:
Q  75 ttggattaacttattttagcttatctactaacataagcacttgtaagactattt 128  Q
    |||||||  ||||||| |||||||||||| ||||||||| |||| |||||||||    
T  21073285 ttggatttgcttatttaagcttatctactgacataagcaattgtgagactattt 21073232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 24895594 - 24895529
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 150  Q
    |||||||| ||||| || | |||||||||||| | |||| | |||||||||||||||||| |||||    
T  24895594 ttattttaacttatatattgacataagcacttatgagaccacttgagagaacttatgaaatcaact 24895529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 30535714 - 30535633
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||| |||||||| || | || |||| |||||| ||||||  ||||| |||  |||||||||||||||||||||||    
T  30535714 tgtttgaattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaacttat 30535633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 34036068 - 34035988
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| ||| |||||||| |||||||||||| ||||| | | |||| |||||| |||  |||||||||||||| |||||||    
T  34036068 tgtttgaattgacttatttgagcttatctactgacatatgta-ttgtgagactacttggaagaacttatgaaaataacttat 34035988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 46825239 - 46825170
Alignment:
Q  84 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    ||||||| | |||||| |||| ||||||  |||||||||||||||| ||||| |||||  ||||||||||    
T  46825239 cttatttgaacttatcgactaccataaggtcttgtaagactatttgggagaaattatgggaacaacttat 46825170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 3968770 - 3968814
Alignment:
Q  165 agttgatttcattttatttccataagctctccagggtaacttatg 209  Q
    |||||||||||| |||||||||||| ||||||||| || ||||||    
T  3968770 agttgatttcatgttatttccataaactctccaggatagcttatg 3968814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 24974047 - 24973980
Alignment:
Q  85 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 153  Q
    |||||| |||||||||| |||| | || |||||| ||||| |||| |||||||||||| ||||||||||    
T  24974047 ttatttgagcttatcta-taacttgagtacttgtgagactgtttgggagaacttatgataacaacttat 24973980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 147
Target Start/End: Original strand, 27863686 - 27863718
Alignment:
Q  115 ttgtaagactatttgagagaacttatgaaaaca 147  Q
    |||| ||||||||||||||||||||||||||||    
T  27863686 ttgtgagactatttgagagaacttatgaaaaca 27863718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 28727684 - 28727756
Alignment:
Q  74 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 146  Q
    ||||||||||||||||| |||||||||  | || |||| |||||  ||||| ||||||||| |||||| ||||    
T  28727684 tttggattaacttatttgagcttatcttttgacctaagaacttgcgagactgtttgagagagcttatggaaac 28727756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 69821 - 69742
Alignment:
Q  71 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 150  Q
    |||||| ||||||||||||| || ||||| ||  |||||  ||||||  | |||||||||||||||||||||||||||||    
T  69821 ttgtttagattaacttatttaagattatccacggacatagccacttgagaaactatttgagagaacttatgaaaacaact 69742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 159892 - 159967
Alignment:
Q  72 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 147  Q
    ||||||||||  ||||||| |||||||||||||| |||| ||||||| | |||||||  ||||||| ||| |||||    
T  159892 tgtttggattggcttatttgagcttatctactaatataaacacttgtgaaactattttggagaactaatggaaaca 159967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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