View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19858_high_21 (Length: 218)
Name: NF19858_high_21
Description: NF19858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19858_high_21 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 205
Target Start/End: Original strand, 48965065 - 48965251
Alignment:
| Q |
19 |
acagtgactctgcaatagaaatgatgcataagtactttgttggccatgtcgacacgtccaccgttccaacaaaagttgagcacaattcaccaccatctac |
118 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48965065 |
acagtgactctgcaatagaaatgatgcatgagtactttgttggccatgtcgacacgtccaccgttccaacaaaagttgagcacaattcaccaccatctac |
48965164 |
T |
|
| Q |
119 |
acaggcacaaagtgttagggatcaatcatcaggatttgttacaaagacattgcaattcctgttgcctctactcatattggcctttgc |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48965165 |
acaggcacaaagtgttagggatcaatcatcaggatttgttacaaagacattgcaattcctgttgcctctactcatattggcctttgc |
48965251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University