View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19859_low_1 (Length: 609)

Name: NF19859_low_1
Description: NF19859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19859_low_1
NF19859_low_1
[»] chr1 (1 HSPs)
chr1 (15-609)||(7593723-7594326)
[»] chr8 (9 HSPs)
chr8 (384-557)||(41943929-41944102)
chr8 (384-555)||(25865687-25865858)
chr8 (416-543)||(44343951-44344081)
chr8 (413-557)||(38799480-38799624)
chr8 (413-557)||(38821893-38822037)
chr8 (413-519)||(43479673-43479779)
chr8 (387-513)||(26592197-26592323)
chr8 (413-501)||(38807037-38807125)
chr8 (274-336)||(25865890-25865955)
[»] chr2 (5 HSPs)
chr2 (384-545)||(34571416-34571577)
chr2 (384-557)||(34578884-34579057)
chr2 (384-557)||(34584633-34584806)
chr2 (391-546)||(34562629-34562784)
chr2 (413-519)||(13576371-13576477)
[»] chr5 (2 HSPs)
chr5 (410-519)||(12546995-12547104)
chr5 (410-519)||(12531515-12531624)
[»] chr7 (2 HSPs)
chr7 (413-552)||(21317564-21317703)
chr7 (413-519)||(3929960-3930066)
[»] scaffold0197 (1 HSPs)
scaffold0197 (413-551)||(31002-31140)
[»] chr4 (1 HSPs)
chr4 (410-519)||(24860569-24860678)


Alignment Details
Target: chr1 (Bit Score: 499; Significance: 0; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 15 - 609
Target Start/End: Original strand, 7593723 - 7594326
Alignment:
Q  15 aagaatcttaaaa-cacatcataaccctaatcaacatagcataaatagaaaatgttcagcgatagaacaaactacnnnnnnnnnnnnngcatcacaaact 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||| |    
T  7593723 aagaatcttaaaaacacatcataaccctaatcaacatagcataaatagaaaatgttcagcgatagaacaaactaccacacacac----gcatcacaaatt 7593818  T
Q  114 gaactcagagatagaaaccacagtcgcatcatcaaaaatcataacgaattcagaaagcaatggagatataagaaaaatagttgcaaagacttcaattgta 213  Q
    ||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7593819 gaattgagagatagaaaccgcagtcgcatcatcaaaaatcataacgaattcagaaagcaatggagatataagaaaaatagttgcaaagacttcaattgta 7593918  T
Q  214 attgaccaattacatca------------caaaaaactaatcatcatccaaaatatgtctgttgttaaagattgaacattataggttcagaactatacaa 301  Q
    |||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7593919 attgaccaattacatcataaacttgtcctcaaaaaactaatcatcatccaaaatatgtctgttgttaaagattgaacattataggttcagaactatacaa 7594018  T
Q  302 cgcataaaagaaactcaaattcataaaaccctaaaatccttcccaaatactaatccaccataaccctaagcaccttgaccatcctaagcacgttcaccac 401  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7594019 cgcataaaagaaactcaaattcataaaaccctaaaatccttcccaaatactaatccaccataaccctaagcaccttgaccatcctaagcacgttcaccac 7594118  T
Q  402 gaatgcgacgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagc 501  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7594119 gaatgcgacgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagc 7594218  T
Q  502 ctcagctgcttcctgaagtgcaagaactgcatggctctggaatctcagatccgtctataacaacaagaatagcaatattaatcagaaaaatatcaacata 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7594219 ctcagctgcttcctgaagtgcaagaactgcatggctctggaatctcagatccgtctataacaacaagaatagcaatattaatcagaaaaatatcaacata 7594318  T
Q  602 aacaaata 609  Q
    ||||||||    
T  7594319 aacaaata 7594326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 3e-62; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 384 - 557
Target Start/End: Complemental strand, 41944102 - 41943929
Alignment:
Q  384 cctaagcacgttcaccacgaatgcgacgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaa 483  Q
    |||||||||||||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  41944102 cctaagcacgttcaccacgaatacggcgtgcaagttgaatgtcctttggcataattgtaaccctcttagcatgaattgcacacaaattggtatcctcaaa 41944003  T
Q  484 caatccaaccaggtaagcctcagctgcttcctgaagtgcaagaactgcatggctctggaatctcagatccgtct 557  Q
    |||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  41944002 caatccaaccagataagcttctgctgcttcctgaagtgcaagaacagcatggctctggaatctgagatccgtct 41943929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 384 - 555
Target Start/End: Complemental strand, 25865858 - 25865687
Alignment:
Q  384 cctaagcacgttcaccacgaatgcgacgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaa 483  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| || ||||||||    
T  25865858 cctaagcacgttcaccacgaatacgacgagcaagctgaatatcctttggcataatcgttaccctcttagcatgaattgcacacaaattagtatcctcaaa 25865759  T
Q  484 caatccaaccaggtaagcctcagctgcttcctgaagtgcaagaactgcatggctctggaatctcagatccgt 555  Q
    |||||| || || ||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  25865758 caatcccacaagataagcctcagcagcttcctgaagtgcaagaacagcatgactctgaaatctcagatccgt 25865687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 416 - 543
Target Start/End: Complemental strand, 44344081 - 44343951
Alignment:
Q  416 agctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctgcttcct 515  Q
    |||||||||||||| |||||||| |||||||||||||||||||| ||||||| |||||| |||||||||||||| || || |||||||||||||||||||    
T  44344081 agctgaatatccttgggcataatcgtcaccctcttagcatgaatagcacacaaattggtatcctcaaacaatcccacgagataagcctcagctgcttcct 44343982  T
Q  516 gaag---tgcaagaactgcatggctctggaa 543  Q
    ||||   ||||||||| ||||| ||||||||    
T  44343981 gaagtactgcaagaacagcatgactctggaa 44343951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 413 - 557
Target Start/End: Complemental strand, 38799624 - 38799480
Alignment:
Q  413 gcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctgctt 512  Q
    ||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| || || ||||| ||||| |  ||||||| |||||| ||||| ||||    
T  38799624 gcaagctgaatgtccttaggcatgattgtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagcttcagcagctt 38799525  T
Q  513 cctgaagtgcaagaactgcatggctctggaatctcagatccgtct 557  Q
    | ||||| ||   ||||||   |||||||||||||||||| ||||    
T  38799524 cttgaagagcggaaactgcgctgctctggaatctcagatctgtct 38799480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 413 - 557
Target Start/End: Original strand, 38821893 - 38822037
Alignment:
Q  413 gcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctgctt 512  Q
    ||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| || || ||||| ||||| |  ||||||| |||||| ||||| ||||    
T  38821893 gcaagctgaatgtccttaggcatgattgtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagcttcagcagctt 38821992  T
Q  513 cctgaagtgcaagaactgcatggctctggaatctcagatccgtct 557  Q
    | ||||| ||   ||||||   |||||||||||||||||| ||||    
T  38821993 cttgaagagcggaaactgcgctgctctggaatctcagatctgtct 38822037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 413 - 519
Target Start/End: Original strand, 43479673 - 43479779
Alignment:
Q  413 gcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctgctt 512  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||||||| || || || || || || |||||||| ||||| || ||||| ||||| ||||    
T  43479673 gcaagttgaatatccttaggcataattgtaaccctcttagcatgaatagcgcaaaggttagtatcttcaaacaaaccaacaagataagcttcagcggctt 43479772  T
Q  513 cctgaag 519  Q
    | |||||    
T  43479773 cttgaag 43479779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 513
Target Start/End: Complemental strand, 26592323 - 26592197
Alignment:
Q  387 aagcacgttcaccacgaatgcgacgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaa 486  Q
    ||||||| || ||||| || || | |||||||||||||||||| ||||| || || || | |||||||||||| || || || || || |||||||||||    
T  26592323 aagcacgctcgccacggatacgcctagcaagctgaatatccttaggcatgatagtaacacgcttagcatgaatagcgcagaggttagtatcctcaaacaa 26592224  T
Q  487 tccaaccaggtaagcctcagctgcttc 513  Q
    |||||| || |||||||| || |||||    
T  26592223 tccaacaagataagcctccgccgcttc 26592197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 501
Target Start/End: Complemental strand, 38807125 - 38807037
Alignment:
Q  413 gcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagc 501  Q
    ||||| ||||| ||||| ||||| || || || ||||||||||||||||| ||| |||| ||||||||||| |  ||||||| ||||||    
T  38807125 gcaagttgaatgtccttaggcatgatagtaactctcttagcatgaattgcgcacggatttgtgtcctcaaagagaccaaccaagtaagc 38807037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 25865955 - 25865890
Alignment:
Q  274 tgaacattataggttcagaactatacaac---gcataaaagaaactcaaattcataaaaccctaaa 336  Q
    ||||| ||||||||||| ||||||||||    |||||||||||||| | |||||||||||||||||    
T  25865955 tgaaccttataggttcaaaactatacaaaaatgcataaaagaaactaacattcataaaaccctaaa 25865890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 384 - 545
Target Start/End: Original strand, 34571416 - 34571577
Alignment:
Q  384 cctaagcacgttcaccacgaatgcgacgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaa 483  Q
    ||||||||||||||||||| || || |||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||| |||||| ||||||||    
T  34571416 cctaagcacgttcaccacggatacggcgagcaagttgaatatccttaggcataatggtaaccctcttagcatgaattgcacacaaattggtatcctcaaa 34571515  T
Q  484 caatccaaccaggtaagcctcagctgcttcctgaagtgcaagaactgcatggctctggaatc 545  Q
    ||| |||||||  || || || ||||||||||||||||| ||||| ||||||||||||||||    
T  34571516 caaaccaaccaaatatgcttccgctgcttcctgaagtgcgagaaccgcatggctctggaatc 34571577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 384 - 557
Target Start/End: Original strand, 34578884 - 34579057
Alignment:
Q  384 cctaagcacgttcaccacgaatgcgacgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaa 483  Q
    ||||||| ||||||||||| || ||||||||||| |||||||||||   |||||  || | ||||||||||||||||||||||| |||||| ||||||||    
T  34578884 cctaagctcgttcaccacggatacgacgagcaagttgaatatccttcaccataacggtgatcctcttagcatgaattgcacacaaattggtatcctcaaa 34578983  T
Q  484 caatccaaccaggtaagcctcagctgcttcctgaagtgcaagaactgcatggctctggaatctcagatccgtct 557  Q
    ||| |||||||  ||||| ||  |||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  34578984 caaaccaaccaaataagcttccactgcttcctgaagtgcgagaactgcatggctctggaatctcaaatctgtct 34579057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 384 - 557
Target Start/End: Original strand, 34584633 - 34584806
Alignment:
Q  384 cctaagcacgttcaccacgaatgcgacgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaa 483  Q
    ||||||| ||||||||||| || ||||||||||| |||||||||||   |||||  || | ||||||||||||||||||||||| |||||| ||||||||    
T  34584633 cctaagctcgttcaccacggatacgacgagcaagttgaatatccttcaccataacggtgatcctcttagcatgaattgcacacaaattggtatcctcaaa 34584732  T
Q  484 caatccaaccaggtaagcctcagctgcttcctgaagtgcaagaactgcatggctctggaatctcagatccgtct 557  Q
    ||| |||||||  ||||| ||  |||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  34584733 caaaccaaccaaataagcttccactgcttcctgaagtgcgagaactgcatggctctggaatctcaaatctgtct 34584806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 391 - 546
Target Start/End: Original strand, 34562629 - 34562784
Alignment:
Q  391 acgttcaccacgaatgcgacgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatcca 490  Q
    |||||||||||| || || | |||||| ||||||||||| |||||||| || ||||||||||||||||||||||||| |||||| ||||||||||| |||    
T  34562629 acgttcaccacggatacggcaagcaagttgaatatccttaggcataatggtaaccctcttagcatgaattgcacacaaattggtatcctcaaacaaacca 34562728  T
Q  491 accaggtaagcctcagctgcttcctgaagtgcaagaactgcatggctctggaatct 546  Q
    ||||  || || || ||||||||||||||||| ||||| ||||| |||||||||||    
T  34562729 accaaatatgcttccgctgcttcctgaagtgcgagaaccgcatgactctggaatct 34562784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 413 - 519
Target Start/End: Complemental strand, 13576477 - 13576371
Alignment:
Q  413 gcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctgctt 512  Q
    ||||| ||||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || ||||||||||| ||||| || ||||| ||||| ||||    
T  13576477 gcaagttgaatatccttaggcataatagtaaccctcttagcatgaatagcacaaagattcgtatcctcaaacaaaccaacaagataagcttcagcagctt 13576378  T
Q  513 cctgaag 519  Q
    | |||||    
T  13576377 cttgaag 13576371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 410 - 519
Target Start/End: Original strand, 12546995 - 12547104
Alignment:
Q  410 cgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctg 509  Q
    |||||||| ||||||||||| ||||| || || ||||||||||||||||| ||||| ||||| || || |||||||| ||||| || ||||| ||||| |    
T  12546995 cgagcaagttgaatatccttaggcatgatagtaaccctcttagcatgaatggcacagagattagtatcttcaaacaaaccaacaagataagcttcagcag 12547094  T
Q  510 cttcctgaag 519  Q
    |||| |||||    
T  12547095 cttcttgaag 12547104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 410 - 519
Target Start/End: Complemental strand, 12531624 - 12531515
Alignment:
Q  410 cgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctg 509  Q
    ||||| || ||||||||||| ||||| || || ||||||||||||||||| ||||| ||||| || || |||||||| ||||| || ||||| ||||| |    
T  12531624 cgagcgagttgaatatccttaggcatgatagtaaccctcttagcatgaatggcacagagattagtatcttcaaacaaaccaacaagataagcttcagcag 12531525  T
Q  510 cttcctgaag 519  Q
    |||| |||||    
T  12531524 cttcttgaag 12531515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 413 - 552
Target Start/End: Complemental strand, 21317703 - 21317564
Alignment:
Q  413 gcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctgctt 512  Q
    ||||| ||||||||||| |||||||| || || |||||||||||||| || || ||||| || || |||||||| ||||| || ||||| ||||| ||||    
T  21317703 gcaagttgaatatccttaggcataatagtaactctcttagcatgaatagcgcaaagatttgtatcttcaaacaaaccaacaagataagcttcagccgctt 21317604  T
Q  513 cctgaagtgcaagaactgcatggctctggaatctcagatc 552  Q
    | ||||| |||  ||| |||  |||||||||||| |||||    
T  21317603 cttgaagagcagaaacagcactgctctggaatctgagatc 21317564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 413 - 519
Target Start/End: Original strand, 3929960 - 3930066
Alignment:
Q  413 gcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctgctt 512  Q
    ||||| ||||||||||| |||||||| || || |||||||||||||| ||||| ||||| || || |||||||| ||||| || || || ||||| ||||    
T  3929960 gcaagttgaatatccttcggcataatagtaactctcttagcatgaatggcacaaagattcgtatcttcaaacaaaccaacaagatacgcttcagcagctt 3930059  T
Q  513 cctgaag 519  Q
    | |||||    
T  3930060 cttgaag 3930066  T

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Target: scaffold0197 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 413 - 551
Target Start/End: Complemental strand, 31140 - 31002
Alignment:
Q  413 gcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctgctt 512  Q
    ||||| ||||||||||| |||||||| || || |||||||||||||| || || ||||| || || |||||||| ||||| || ||||| ||||| ||||    
T  31140 gcaagttgaatatccttaggcataatagtaactctcttagcatgaatagcgcaaagatttgtatcttcaaacaaaccaacaagataagcttcagcagctt 31041  T
Q  513 cctgaagtgcaagaactgcatggctctggaatctcagat 551  Q
    | ||||| |||  ||| |||  |||||||||||| ||||    
T  31040 cttgaagagcagaaacagcactgctctggaatctgagat 31002  T

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Target: chr4 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 410 - 519
Target Start/End: Complemental strand, 24860678 - 24860569
Alignment:
Q  410 cgagcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctg 509  Q
    ||||| || ||||||||||| |||||||| || || |||||||||||||| || || ||||| || || ||||| | |||||| || ||||| ||||| |    
T  24860678 cgagcgagttgaatatccttgggcataatggtaactctcttagcatgaatagcgcaaagatttgtatcttcaaagagtccaacgagataagcttcagcag 24860579  T
Q  510 cttcctgaag 519  Q
    |||| |||||    
T  24860578 cttcttgaag 24860569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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