View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19859_low_3 (Length: 424)

Name: NF19859_low_3
Description: NF19859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19859_low_3
NF19859_low_3
[»] chr1 (5 HSPs)
chr1 (1-406)||(36578933-36579338)
chr1 (24-97)||(45481487-45481560)
chr1 (27-80)||(50849084-50849137)
chr1 (24-76)||(10480708-10480760)
chr1 (60-100)||(45418054-45418094)
[»] chr5 (4 HSPs)
chr5 (27-102)||(23118040-23118115)
chr5 (24-81)||(8882409-8882466)
chr5 (24-76)||(7216798-7216850)
chr5 (31-87)||(18981193-18981249)
[»] chr8 (3 HSPs)
chr8 (24-87)||(35682696-35682759)
chr8 (27-85)||(18422459-18422517)
chr8 (54-102)||(44975202-44975250)
[»] chr4 (6 HSPs)
chr4 (29-100)||(7371539-7371610)
chr4 (19-77)||(39842026-39842084)
chr4 (46-87)||(42756110-42756151)
chr4 (53-101)||(36071167-36071215)
chr4 (31-87)||(45029609-45029665)
chr4 (53-101)||(54677248-54677296)
[»] chr3 (6 HSPs)
chr3 (46-93)||(47440766-47440813)
chr3 (29-87)||(47039426-47039484)
chr3 (46-87)||(17507703-17507744)
chr3 (23-80)||(26973354-26973411)
chr3 (24-76)||(28130949-28131001)
chr3 (23-87)||(53633621-53633685)
[»] chr7 (5 HSPs)
chr7 (23-85)||(7388045-7388107)
chr7 (23-85)||(36755008-36755069)
chr7 (23-85)||(36760805-36760866)
chr7 (27-87)||(8879751-8879811)
chr7 (29-81)||(34000261-34000313)
[»] chr6 (5 HSPs)
chr6 (31-101)||(29431460-29431530)
chr6 (22-87)||(31140816-31140881)
chr6 (29-81)||(6470626-6470678)
chr6 (52-100)||(9973240-9973288)
chr6 (21-101)||(28592677-28592757)
[»] chr2 (2 HSPs)
chr2 (53-93)||(4238782-4238822)
chr2 (23-75)||(5676732-5676784)


Alignment Details
Target: chr1 (Bit Score: 306; Significance: 1e-172; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 36579338 - 36578933
Alignment:
Q  1 tcattatcaaatcatgactctctgtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcgatctccggacacca 100  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||||||||||||| ||||| |||||||| ||||||||||||||    
T  36579338 tcattatcaaatcatgactctctgtcctcgtgagcttaactaatatggtaatgataatccataatatatgcaaggtccgggattcaatctccggacacca 36579239  T
Q  101 cccnnnnnnnntatcctgaccctttaatgcgaattagatggtacataatatataaatcatgtcgggatccactctacaaagtaattttgtcacgtaacca 200  Q
    |||        |||| |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36579238 cccaaaaaaaatatcatgacccttaaatgcgaattagatggtacgtaatatacaaatcatgtcgggatccactctacaaagtaattttgtcacgtaacca 36579139  T
Q  201 ttatttcatgaacgtctcctacaaaaggacattgaactttagttaaatgtacattctcaactctgatcaaacctctagactctcctaaaactctcactaa 300  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  36579138 ttatttcatgcacgtctcctacaaaaggacattgaactttagttaaaggtacattctcaactctgatcaaacctctagactctcctaaaactctcattga 36579039  T
Q  301 cttgagcgttagagtccttgcagatataacaacttctttgaggagtaggcgatgtcctccaccgtctccattcaactttggttgttgcctcatgtccact 400  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  36579038 cttgagcgttagagtccttgcagatataacaacctatttgaggagtaggcgatgtcctccaccgcctccattcaacattggttgttgcctcatgtccact 36578939  T
Q  401 tctgat 406  Q
    ||||||    
T  36578938 tctgat 36578933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 45481487 - 45481560
Alignment:
Q  24 gtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcgatctccggaca 97  Q
    |||| |||||||||||||||| || ||| |||||| ||||||||||| ||||| |||| ||||| |||||||||    
T  45481487 gtccccgtgagcttaattcatttggtaaggacaatgcataatatatgcaaggtccggggttcgaactccggaca 45481560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 50849137 - 50849084
Alignment:
Q  27 ctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgg 80  Q
    ||||||||||||| |||  || |||||||||| |||||||||||||||||||||    
T  50849137 ctcgtgagcttaactcagttggtaatgacaatgcataatatatgtaaggttcgg 50849084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 10480708 - 10480760
Alignment:
Q  24 gtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggt 76  Q
    |||||||||||||||| ||| ||| ||| |||||| |||||||||||||||||    
T  10480708 gtcctcgtgagcttaactcagatggtaaggacaatgcataatatatgtaaggt 10480760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 45418094 - 45418054
Alignment:
Q  60 cataatatatgtaaggttcgggattcgatctccggacacca 100  Q
    ||||||||||| ||||||| |||||||| ||||||||||||    
T  45418094 cataatatatgcaaggttcaggattcgaactccggacacca 45418054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 23118115 - 23118040
Alignment:
Q  27 ctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcgatctccggacaccacc 102  Q
    ||||||||||||| |||  |||||| |||||| |||||||||||||||||| ||| ||||| ||| ||||||||||    
T  23118115 ctcgtgagcttaactcagttgataaggacaatgcataatatatgtaaggtttggggttcgaactctggacaccacc 23118040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 8882466 - 8882409
Alignment:
Q  24 gtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcggg 81  Q
    |||| ||||||||||| |||  ||||||||||| | ||||||||||||||||| ||||    
T  8882466 gtccccgtgagcttaactcagttgataatgacagtgcataatatatgtaaggtccggg 8882409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 7216798 - 7216850
Alignment:
Q  24 gtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggt 76  Q
    |||||||||||||||| |||| |||||| ||| ||  ||||||||||||||||    
T  7216798 gtcctcgtgagcttaactcatttgataaggacgatgaataatatatgtaaggt 7216850  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 18981249 - 18981193
Alignment:
Q  31 tgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcga 87  Q
    ||||||||| ||| ||| |||  ||||| |||||||||||||||||||||| |||||    
T  18981249 tgagcttaactcaaatggtaagaacaatgcataatatatgtaaggttcggggttcga 18981193  T

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Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 35682759 - 35682696
Alignment:
Q  24 gtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcga 87  Q
    |||||||||||||||  |||  || ||  ||||||||||||||||||||||||||||| |||||    
T  35682759 gtcctcgtgagcttagctcagttggtacggacaatccataatatatgtaaggttcgggtttcga 35682696  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 18422517 - 18422459
Alignment:
Q  27 ctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattc 85  Q
    ||||| |||||||||||  |||||   ||||| ||||||||||||||||||||||||||    
T  18422517 ctcgtaagcttaattcagttgatagaaacaatgcataatatatgtaaggttcgggattc 18422459  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 44975202 - 44975250
Alignment:
Q  54 acaatccataatatatgtaaggttcgggattcgatctccggacaccacc 102  Q
    ||||| ||||||||||| ||||||||||||||||   ||||||||||||    
T  44975202 acaatgcataatatatgcaaggttcgggattcgaaacccggacaccacc 44975250  T

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Target: chr4 (Bit Score: 32; Significance: 0.00000001; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 7371610 - 7371539
Alignment:
Q  29 cgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcgatctccggacacca 100  Q
    ||||||||||| |||  |||||| |||||| ||||||||||| ||||| |||| ||||| | ||||||||||    
T  7371610 cgtgagcttaactcagttgataaggacaatacataatatatgcaaggtccggggttcgaaccccggacacca 7371539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 39842084 - 39842026
Alignment:
Q  19 tctctgtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggtt 77  Q
    ||||| ||||||||| ||||| |||  |||||| |||||| ||||||||||||||||||    
T  39842084 tctctatcctcgtgatcttaactcagttgataaggacaatgcataatatatgtaaggtt 39842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 42756151 - 42756110
Alignment:
Q  46 tgataatgacaatccataatatatgtaaggttcgggattcga 87  Q
    |||||| |||||| ||||||||||| ||||||||||||||||    
T  42756151 tgataaggacaatgcataatatatgcaaggttcgggattcga 42756110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 36071167 - 36071215
Alignment:
Q  53 gacaatccataatatatgtaaggttcgggattcgatctccggacaccac 101  Q
    |||||| |||||||||||||||||||||| ||||| | |||| ||||||    
T  36071167 gacaatgcataatatatgtaaggttcggggttcgaacgccgggcaccac 36071215  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 45029665 - 45029609
Alignment:
Q  31 tgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcga 87  Q
    ||||||||| |||| || ||| |||||| |||||||||||||||||| ||| |||||    
T  45029665 tgagcttaactcatttggtaaggacaatgcataatatatgtaaggtttggggttcga 45029609  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 54677248 - 54677296
Alignment:
Q  53 gacaatccataatatatgtaaggttcgggattcgatctccggacaccac 101  Q
    |||||| |||||||||||||||||||| ||||| | |||||| ||||||    
T  54677248 gacaatgcataatatatgtaaggttcgagattcaaactccggccaccac 54677296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 47440766 - 47440813
Alignment:
Q  46 tgataatgacaatccataatatatgtaaggttcgggattcgatctccg 93  Q
    |||||| ||||||  ||||||||||||||||||||||||||| |||||    
T  47440766 tgataaggacaatatataatatatgtaaggttcgggattcgaactccg 47440813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 47039426 - 47039484
Alignment:
Q  29 cgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcga 87  Q
    ||||||||||| ||| ||||||| |||||| ||||||||||| || ||||||| |||||    
T  47039426 cgtgagcttaactcagatgataaggacaatgcataatatatgcaaagttcggggttcga 47039484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 17507744 - 17507703
Alignment:
Q  46 tgataatgacaatccataatatatgtaaggttcgggattcga 87  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||    
T  17507744 tgatattgacaatgcataatatatgcaaggttcgggattcga 17507703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 26973354 - 26973411
Alignment:
Q  23 tgtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgg 80  Q
    ||||||||||| ||||||| |  || ||| |||||| |||||||||||||||||||||    
T  26973354 tgtcctcgtgaacttaattaaattggtaaggacaatgcataatatatgtaaggttcgg 26973411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 28131001 - 28130949
Alignment:
Q  24 gtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggt 76  Q
    ||||||||||||||| |||| ||| ||| |||||| ||||||||||| |||||    
T  28131001 gtcctcgtgagcttagttcaaatggtaaggacaatgcataatatatgcaaggt 28130949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 53633685 - 53633621
Alignment:
Q  23 tgtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcga 87  Q
    ||||||||||||||||| |||  || ||| || ||| ||||||||||||||||| |||| |||||    
T  53633685 tgtcctcgtgagcttaactcagttggtaaggataatgcataatatatgtaaggtccggggttcga 53633621  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000004; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 7388107 - 7388045
Alignment:
Q  23 tgtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattc 85  Q
    ||||||||||||||||| |||  || |   |||||| ||||||||||||||||||||||||||    
T  7388107 tgtcctcgtgagcttaactcagttggttgggacaatgcataatatatgtaaggttcgggattc 7388045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 36755008 - 36755069
Alignment:
Q  23 tgtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattc 85  Q
    ||||||||||||||||| |||  || ||  |||||| ||||||||||||||||||||||||||    
T  36755008 tgtcctcgtgagcttaactcagttggtag-gacaatgcataatatatgtaaggttcgggattc 36755069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 36760805 - 36760866
Alignment:
Q  23 tgtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattc 85  Q
    ||||||||||||||||| |||  || ||  |||||| ||||||||||||||||||||||||||    
T  36760805 tgtcctcgtgagcttaactcagttggtag-gacaatgcataatatatgtaaggttcgggattc 36760866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 8879811 - 8879751
Alignment:
Q  27 ctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcga 87  Q
    ||||||||||||| |||  || ||  |||||| ||||||||||| ||||||||||||||||    
T  8879811 ctcgtgagcttaactcagttggtatagacaatgcataatatatgcaaggttcgggattcga 8879751  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 34000261 - 34000313
Alignment:
Q  29 cgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcggg 81  Q
    ||||||||||| |||  |||||| || ||| ||||||||||||||||||||||    
T  34000261 cgtgagcttaactcagttgataaggataatgcataatatatgtaaggttcggg 34000313  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 29431460 - 29431530
Alignment:
Q  31 tgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcgatctccggacaccac 101  Q
    |||||||| ||||| |||||| |||||| |||||| ||||||||||  | | ||||||| |||||||||||    
T  29431460 tgagcttagttcatttgataaggacaatgcataatgtatgtaaggtctgaggttcgatccccggacaccac 29431530  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 31140881 - 31140816
Alignment:
Q  22 ctgtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcga 87  Q
    |||||||||||||||||| |||  |||||| || |||  |||||||||| ||||||| ||||||||    
T  31140881 ctgtcctcgtgagcttaactcagctgataaagataatgtataatatatgcaaggttcaggattcga 31140816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 6470678 - 6470626
Alignment:
Q  29 cgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcggg 81  Q
    ||||||||||| |||  |||||| |||||| ||||||||||||||| ||||||    
T  6470678 cgtgagcttaactcagttgataaagacaatgcataatatatgtaagtttcggg 6470626  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 9973240 - 9973288
Alignment:
Q  52 tgacaatccataatatatgtaaggttcgggattcgatctccggacacca 100  Q
    ||||||| |||||||||||||||||| ||| ||||| |||||| |||||    
T  9973240 tgacaatgcataatatatgtaaggtttggggttcgaactccggccacca 9973288  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 28592757 - 28592677
Alignment:
Q  21 tctgtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaaggttcgggattcgatctccggacaccac 101  Q
    |||||||||||||||||| ||||  ||  || |||||| |||||||||||||||||  ||| ||||| |  ||||||||||    
T  28592757 tctgtcctcgtgagcttagttcaattggcaaagacaatgcataatatatgtaaggtctggggttcgaacctcggacaccac 28592677  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 4238782 - 4238822
Alignment:
Q  53 gacaatccataatatatgtaaggttcgggattcgatctccg 93  Q
    |||||| |||||||||||||||||||||| ||||| |||||    
T  4238782 gacaatgcataatatatgtaaggttcggggttcgaactccg 4238822  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 5676732 - 5676784
Alignment:
Q  23 tgtcctcgtgagcttaattcatatgataatgacaatccataatatatgtaagg 75  Q
    ||||||||||||||||| |||  || |||||||||| ||||||||||| ||||    
T  5676732 tgtcctcgtgagcttaactcagttggtaatgacaatgcataatatatgcaagg 5676784  T

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