View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19859_low_6 (Length: 318)

Name: NF19859_low_6
Description: NF19859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19859_low_6
NF19859_low_6
[»] chr1 (60 HSPs)
chr1 (20-264)||(15317016-15317258)
chr1 (62-241)||(11141558-11141735)
chr1 (62-244)||(20942404-20942586)
chr1 (62-244)||(16884088-16884270)
chr1 (18-241)||(20087004-20087223)
chr1 (133-260)||(21411305-21411433)
chr1 (92-243)||(21746338-21746488)
chr1 (178-243)||(31928078-31928143)
chr1 (178-241)||(21697583-21697646)
chr1 (175-260)||(30492168-30492254)
chr1 (178-264)||(20824996-20825084)
chr1 (178-238)||(23630404-23630464)
chr1 (178-263)||(23196234-23196321)
chr1 (180-245)||(20848481-20848547)
chr1 (35-103)||(12237802-12237871)
chr1 (178-264)||(2341668-2341756)
chr1 (178-264)||(19858600-19858688)
chr1 (178-264)||(20838815-20838903)
chr1 (178-264)||(29555091-29555179)
chr1 (62-241)||(7793337-7793511)
chr1 (183-241)||(22000279-22000337)
chr1 (183-241)||(22041347-22041405)
chr1 (175-240)||(41311590-41311655)
chr1 (178-264)||(19852465-19852553)
chr1 (178-264)||(20032648-20032736)
chr1 (178-238)||(23711923-23711983)
chr1 (180-244)||(18710156-18710222)
chr1 (200-243)||(21738042-21738085)
chr1 (179-244)||(11156403-11156469)
chr1 (183-264)||(20639696-20639778)
chr1 (183-240)||(11810441-11810498)
chr1 (181-264)||(11944514-11944599)
chr1 (200-264)||(21729621-21729686)
chr1 (181-264)||(43631466-43631551)
chr1 (175-243)||(49327431-49327499)
chr1 (62-110)||(49327540-49327587)
chr1 (35-103)||(21732285-21732355)
chr1 (202-264)||(29240471-29240534)
chr1 (13-103)||(31927932-31928023)
chr1 (179-264)||(45306206-45306293)
chr1 (22-103)||(30491951-30492033)
chr1 (178-244)||(47483551-47483620)
chr1 (178-242)||(5380079-5380143)
chr1 (178-240)||(21541337-21541401)
chr1 (183-243)||(36917141-36917201)
chr1 (183-264)||(42096642-42096726)
chr1 (183-241)||(12237932-12237991)
chr1 (183-222)||(22901374-22901413)
chr1 (183-242)||(24849473-24849532)
chr1 (178-240)||(19960607-19960669)
chr1 (66-103)||(11156533-11156569)
chr1 (30-103)||(19667252-19667326)
chr1 (185-242)||(24241155-24241212)
chr1 (200-258)||(21663598-21663658)
chr1 (176-243)||(21920199-21920267)
chr1 (183-243)||(21948814-21948874)
chr1 (183-243)||(21962375-21962435)
chr1 (135-211)||(21987631-21987707)
chr1 (180-228)||(22071499-22071546)
chr1 (180-243)||(36614391-36614455)
[»] scaffold0211 (1 HSPs)
scaffold0211 (13-264)||(8755-9006)
[»] scaffold0078 (1 HSPs)
scaffold0078 (13-252)||(17930-18168)
[»] chr2 (56 HSPs)
chr2 (13-263)||(22859727-22859978)
chr2 (62-253)||(24644237-24644422)
chr2 (72-264)||(20723467-20723662)
chr2 (68-258)||(19715353-19715544)
chr2 (62-241)||(23672726-23672898)
chr2 (68-258)||(19719916-19720107)
chr2 (68-245)||(19791820-19791998)
chr2 (174-260)||(25266736-25266822)
chr2 (174-244)||(23263428-23263497)
chr2 (174-244)||(23268644-23268713)
chr2 (180-264)||(28972016-28972102)
chr2 (133-241)||(19034900-19035009)
chr2 (178-264)||(25036745-25036833)
chr2 (178-264)||(25040852-25040940)
chr2 (178-241)||(20647519-20647581)
chr2 (13-128)||(20914848-20914962)
chr2 (178-258)||(22809333-22809415)
chr2 (174-236)||(23275521-23275582)
chr2 (178-258)||(8890633-8890713)
chr2 (178-245)||(24503651-24503720)
chr2 (178-245)||(31754907-31754976)
chr2 (178-245)||(19795957-19796025)
chr2 (178-264)||(20964655-20964743)
chr2 (178-244)||(23061947-23062014)
chr2 (178-245)||(6031621-6031690)
chr2 (180-244)||(21906693-21906758)
chr2 (181-264)||(23029690-23029775)
chr2 (115-264)||(24942835-24942985)
chr2 (174-242)||(20914987-20915055)
chr2 (178-260)||(38932218-38932300)
chr2 (178-242)||(24528036-24528100)
chr2 (178-253)||(25108126-25108203)
chr2 (180-240)||(24683319-24683379)
chr2 (183-261)||(24651768-24651847)
chr2 (183-264)||(19655078-19655160)
chr2 (178-244)||(25590824-25590893)
chr2 (181-264)||(8688207-8688292)
chr2 (200-241)||(23147975-23148016)
chr2 (200-241)||(23559765-23559806)
chr2 (183-264)||(199995-200079)
chr2 (183-264)||(6745063-6745147)
chr2 (183-243)||(11465510-11465570)
chr2 (183-264)||(17967011-17967095)
chr2 (178-240)||(43692774-43692838)
chr2 (66-110)||(45028024-45028067)
chr2 (68-103)||(21124512-21124547)
chr2 (200-242)||(28351816-28351858)
chr2 (202-240)||(29840194-29840232)
chr2 (183-240)||(2942318-2942375)
chr2 (171-220)||(21124605-21124654)
chr2 (62-103)||(22797223-22797264)
chr2 (183-263)||(22797334-22797415)
chr2 (178-240)||(27368263-27368327)
chr2 (260-301)||(45013300-45013341)
chr2 (180-220)||(20592168-20592208)
chr2 (180-228)||(44619975-44620022)
[»] scaffold0037 (2 HSPs)
scaffold0037 (13-264)||(42781-43033)
scaffold0037 (181-264)||(37243-37328)
[»] chr4 (61 HSPs)
chr4 (18-264)||(18170212-18170455)
chr4 (18-253)||(18270688-18270924)
chr4 (18-260)||(18260718-18260959)
chr4 (62-258)||(53905869-53906058)
chr4 (13-243)||(16484049-16484274)
chr4 (66-241)||(15324325-15324504)
chr4 (174-260)||(30873239-30873325)
chr4 (178-260)||(16229781-16229866)
chr4 (13-191)||(16230429-16230608)
chr4 (178-241)||(30237191-30237254)
chr4 (179-241)||(14992294-14992356)
chr4 (179-241)||(15005641-15005703)
chr4 (178-241)||(13443650-13443713)
chr4 (137-258)||(13451514-13451636)
chr4 (178-245)||(14479918-14479987)
chr4 (178-243)||(14484965-14485030)
chr4 (35-103)||(15243674-15243743)
chr4 (178-245)||(55503809-55503878)
chr4 (179-245)||(31132421-31132489)
chr4 (178-264)||(41529729-41529817)
chr4 (179-244)||(4169934-4170001)
chr4 (62-223)||(14820797-14820953)
chr4 (178-264)||(14062352-14062441)
chr4 (179-245)||(14697656-14697724)
chr4 (193-264)||(38982702-38982774)
chr4 (178-243)||(40908052-40908119)
chr4 (26-103)||(13886240-13886318)
chr4 (178-236)||(14508556-14508613)
chr4 (175-221)||(15546033-15546079)
chr4 (193-253)||(12931286-12931347)
chr4 (178-242)||(13045784-13045849)
chr4 (35-103)||(15306576-15306645)
chr4 (181-264)||(42598394-42598479)
chr4 (178-241)||(13900284-13900348)
chr4 (178-264)||(16220671-16220759)
chr4 (200-240)||(22726591-22726631)
chr4 (193-258)||(2585836-2585903)
chr4 (183-234)||(8833235-8833286)
chr4 (179-242)||(41405312-41405375)
chr4 (68-152)||(26078256-26078339)
chr4 (180-243)||(41940000-41940065)
chr4 (183-243)||(2973416-2973476)
chr4 (13-103)||(8833348-8833439)
chr4 (180-228)||(10312761-10312809)
chr4 (183-243)||(19129044-19129104)
chr4 (178-222)||(27850163-27850207)
chr4 (183-241)||(15243554-15243613)
chr4 (183-241)||(15306457-15306515)
chr4 (66-128)||(16156198-16156258)
chr4 (181-245)||(26078364-26078430)
chr4 (183-253)||(10687498-10687570)
chr4 (183-253)||(10901138-10901210)
chr4 (66-151)||(15406450-15406534)
chr4 (200-244)||(27904685-27904730)
chr4 (200-241)||(29856167-29856208)
chr4 (183-240)||(49549873-49549930)
chr4 (179-245)||(11846507-11846575)
chr4 (180-228)||(13742157-13742204)
chr4 (183-243)||(21880920-21880980)
chr4 (178-243)||(33198341-33198408)
chr4 (183-239)||(45003747-45003803)
[»] chr6 (54 HSPs)
chr6 (13-264)||(10583339-10583590)
chr6 (62-260)||(25395423-25395620)
chr6 (62-260)||(19472882-19473074)
chr6 (68-264)||(14383964-14384163)
chr6 (62-258)||(24720023-24720212)
chr6 (68-264)||(14375856-14376055)
chr6 (30-128)||(18785599-18785696)
chr6 (22-243)||(22799032-22799249)
chr6 (13-242)||(23104628-23104853)
chr6 (68-264)||(19589125-19589320)
chr6 (30-103)||(19448876-19448949)
chr6 (30-87)||(19450886-19450943)
chr6 (30-87)||(19467418-19467475)
chr6 (181-240)||(24412966-24413025)
chr6 (66-240)||(25749133-25749306)
chr6 (180-264)||(14595322-14595408)
chr6 (176-241)||(17413455-17413520)
chr6 (178-258)||(19439147-19439228)
chr6 (178-264)||(2707810-2707898)
chr6 (178-241)||(18316687-18316751)
chr6 (66-128)||(19818469-19818529)
chr6 (180-264)||(9623379-9623464)
chr6 (181-264)||(28707379-28707464)
chr6 (178-242)||(8761082-8761149)
chr6 (182-264)||(24514486-24514570)
chr6 (42-84)||(9623250-9623292)
chr6 (181-242)||(18785486-18785548)
chr6 (193-258)||(23236066-23236132)
chr6 (62-151)||(22757810-22757898)
chr6 (178-242)||(8768819-8768886)
chr6 (178-222)||(16804019-16804063)
chr6 (178-222)||(16811864-16811908)
chr6 (178-222)||(16828885-16828929)
chr6 (193-264)||(23235653-23235725)
chr6 (178-222)||(29491807-29491851)
chr6 (178-228)||(8717847-8717897)
chr6 (180-264)||(7428767-7428852)
chr6 (193-245)||(14616933-14616986)
chr6 (184-240)||(14996617-14996674)
chr6 (180-220)||(15538239-15538279)
chr6 (193-264)||(19448723-19448795)
chr6 (193-264)||(19450717-19450789)
chr6 (183-264)||(24561636-24561720)
chr6 (183-242)||(10464917-10464976)
chr6 (183-242)||(10471439-10471498)
chr6 (200-242)||(21680482-21680524)
chr6 (184-245)||(22757718-22757780)
chr6 (200-241)||(18136872-18136913)
chr6 (183-240)||(25346497-25346554)
chr6 (66-110)||(12447805-12447848)
chr6 (193-264)||(19457104-19457176)
chr6 (193-264)||(19467249-19467321)
chr6 (208-240)||(22345985-22346017)
chr6 (178-221)||(23954790-23954834)
[»] scaffold0827 (1 HSPs)
scaffold0827 (13-263)||(1412-1664)
[»] scaffold0028 (4 HSPs)
scaffold0028 (62-260)||(64365-64562)
scaffold0028 (200-264)||(47739-47805)
scaffold0028 (200-264)||(53145-53211)
scaffold0028 (180-242)||(93418-93480)
[»] chr5 (59 HSPs)
chr5 (13-264)||(21574500-21574752)
chr5 (68-261)||(83-276)
chr5 (66-243)||(20937041-20937218)
chr5 (133-241)||(426668-426777)
chr5 (62-241)||(6405041-6405223)
chr5 (73-243)||(22313387-22313557)
chr5 (177-260)||(23433505-23433588)
chr5 (177-260)||(23444870-23444953)
chr5 (178-242)||(25013075-25013139)
chr5 (178-260)||(20842602-20842685)
chr5 (178-260)||(23562261-23562344)
chr5 (62-240)||(20831158-20831336)
chr5 (178-264)||(22759855-22759943)
chr5 (178-243)||(18818350-18818415)
chr5 (261-318)||(22788125-22788182)
chr5 (178-245)||(22879998-22880067)
chr5 (178-264)||(33474545-33474633)
chr5 (179-245)||(43120143-43120211)
chr5 (172-243)||(21905950-21906021)
chr5 (183-264)||(22008544-22008627)
chr5 (179-241)||(21872288-21872350)
chr5 (179-241)||(21876568-21876630)
chr5 (180-264)||(27636280-27636365)
chr5 (180-264)||(43244399-43244485)
chr5 (181-264)||(19075409-19075494)
chr5 (178-264)||(6728907-6728995)
chr5 (179-245)||(43123676-43123744)
chr5 (178-241)||(10034555-10034618)
chr5 (182-241)||(15194708-15194767)
chr5 (13-103)||(21661940-21662032)
chr5 (30-128)||(19362149-19362246)
chr5 (30-139)||(19802397-19802503)
chr5 (62-103)||(10034689-10034730)
chr5 (181-264)||(31253684-31253769)
chr5 (62-110)||(5342323-5342370)
chr5 (175-243)||(5342411-5342479)
chr5 (193-264)||(22237869-22237941)
chr5 (179-264)||(29326368-29326455)
chr5 (178-242)||(21494365-21494429)
chr5 (62-103)||(21902426-21902467)
chr5 (183-264)||(1858245-1858329)
chr5 (178-240)||(21676214-21676278)
chr5 (193-264)||(22233305-22233377)
chr5 (183-222)||(22590853-22590892)
chr5 (183-222)||(22594408-22594447)
chr5 (178-220)||(4396835-4396877)
chr5 (200-242)||(17023582-17023624)
chr5 (200-242)||(21636790-21636832)
chr5 (184-236)||(17265432-17265482)
chr5 (184-236)||(17271914-17271964)
chr5 (193-241)||(21661812-21661861)
chr5 (183-236)||(24618398-24618451)
chr5 (183-236)||(24714629-24714682)
chr5 (183-236)||(24747657-24747710)
chr5 (176-243)||(7774355-7774423)
chr5 (183-243)||(16775774-16775834)
chr5 (66-110)||(18941760-18941803)
chr5 (179-243)||(18941850-18941913)
chr5 (183-240)||(23077009-23077068)
[»] scaffold1542 (1 HSPs)
scaffold1542 (57-264)||(1462-1670)
[»] scaffold0108 (2 HSPs)
scaffold0108 (30-260)||(51003-51232)
scaffold0108 (178-243)||(44929-44994)
[»] scaffold0011 (7 HSPs)
scaffold0011 (62-244)||(197986-198169)
scaffold0011 (178-245)||(146461-146528)
scaffold0011 (178-258)||(57424-57504)
scaffold0011 (178-264)||(251318-251406)
scaffold0011 (178-264)||(257937-258025)
scaffold0011 (13-103)||(146592-146683)
scaffold0011 (183-264)||(175300-175384)
[»] chr7 (88 HSPs)
chr7 (13-260)||(14179508-14179753)
chr7 (62-258)||(11882076-11882264)
chr7 (171-243)||(16074624-16074696)
chr7 (171-260)||(15438270-15438360)
chr7 (133-241)||(15098573-15098682)
chr7 (137-240)||(15086676-15086779)
chr7 (178-241)||(12694045-12694108)
chr7 (133-260)||(82698-82826)
chr7 (178-245)||(12546619-12546687)
chr7 (178-264)||(16185036-16185124)
chr7 (178-264)||(46349407-46349495)
chr7 (174-241)||(15105018-15105085)
chr7 (178-241)||(16476770-16476833)
chr7 (180-245)||(3327180-3327246)
chr7 (178-245)||(125253-125322)
chr7 (129-261)||(11220693-11220824)
chr7 (180-258)||(10305368-10305448)
chr7 (180-258)||(10306080-10306160)
chr7 (179-245)||(21744430-21744498)
chr7 (36-103)||(46624423-46624491)
chr7 (175-243)||(46682856-46682924)
chr7 (179-243)||(8775233-8775299)
chr7 (13-120)||(16188254-16188362)
chr7 (178-240)||(16576141-16576203)
chr7 (178-240)||(16589459-16589521)
chr7 (180-264)||(38827126-38827212)
chr7 (183-241)||(46624304-46624362)
chr7 (181-264)||(11395352-11395437)
chr7 (183-240)||(12802184-12802241)
chr7 (171-240)||(19144999-19145068)
chr7 (171-240)||(20744398-20744467)
chr7 (13-103)||(12802032-12802123)
chr7 (178-241)||(14583318-14583381)
chr7 (70-240)||(19151297-19151466)
chr7 (70-240)||(20750696-20750865)
chr7 (180-264)||(10308653-10308739)
chr7 (178-236)||(14145956-14146014)
chr7 (180-240)||(16952963-16953025)
chr7 (158-258)||(32770784-32770886)
chr7 (183-241)||(45184911-45184969)
chr7 (183-240)||(11308410-11308467)
chr7 (183-240)||(11311718-11311775)
chr7 (183-240)||(12684689-12684746)
chr7 (179-243)||(13018925-13018989)
chr7 (179-243)||(13019097-13019161)
chr7 (179-243)||(13025632-13025696)
chr7 (178-234)||(14431470-14431526)
chr7 (178-241)||(15141638-15141702)
chr7 (62-110)||(15811603-15811650)
chr7 (193-264)||(16188427-16188499)
chr7 (175-243)||(19438710-19438778)
chr7 (62-110)||(19438819-19438866)
chr7 (182-264)||(21232689-21232773)
chr7 (193-258)||(3290449-3290516)
chr7 (62-109)||(15454899-15454945)
chr7 (178-240)||(13677731-13677793)
chr7 (180-242)||(16669243-16669305)
chr7 (178-220)||(16928633-16928675)
chr7 (178-220)||(16929724-16929766)
chr7 (180-242)||(17643611-17643673)
chr7 (18-103)||(45185030-45185116)
chr7 (62-103)||(13677856-13677897)
chr7 (178-245)||(14946471-14946540)
chr7 (178-245)||(15374064-15374133)
chr7 (183-264)||(4279317-4279401)
chr7 (183-241)||(6411283-6411343)
chr7 (175-243)||(15454789-15454857)
chr7 (178-240)||(16946361-16946425)
chr7 (183-264)||(19615649-19615733)
chr7 (183-264)||(36306765-36306848)
chr7 (68-110)||(11220655-11220698)
chr7 (203-242)||(17065063-17065102)
chr7 (180-239)||(23441673-23441732)
chr7 (178-240)||(26295455-26295520)
chr7 (62-110)||(11384389-11384437)
chr7 (62-110)||(11395665-11395713)
chr7 (177-244)||(18959159-18959227)
chr7 (30-103)||(46349269-46349343)
chr7 (179-264)||(4988298-4988386)
chr7 (179-264)||(4992396-4992484)
chr7 (183-243)||(12460906-12460966)
chr7 (66-110)||(13019036-13019079)
chr7 (66-110)||(13019208-13019251)
chr7 (66-110)||(13025743-13025786)
chr7 (175-243)||(15811494-15811562)
chr7 (183-243)||(17469009-17469069)
chr7 (183-243)||(17584145-17584205)
chr7 (180-240)||(41783806-41783866)
[»] chr3 (73 HSPs)
chr3 (62-260)||(12148161-12148353)
chr3 (62-260)||(12152287-12152479)
chr3 (62-253)||(15935556-15935749)
chr3 (62-243)||(18136863-18137045)
chr3 (62-243)||(18130367-18130549)
chr3 (68-264)||(12961946-12962138)
chr3 (178-258)||(11888745-11888825)
chr3 (119-253)||(15937465-15937599)
chr3 (66-245)||(31691204-31691385)
chr3 (13-103)||(12201909-12202001)
chr3 (66-245)||(31942832-31943013)
chr3 (62-245)||(12254580-12254764)
chr3 (178-243)||(13037598-13037663)
chr3 (178-243)||(13043963-13044028)
chr3 (175-260)||(16824416-16824502)
chr3 (261-318)||(54563590-54563647)
chr3 (178-264)||(2249689-2249777)
chr3 (178-264)||(2270913-2271001)
chr3 (18-151)||(15955531-15955667)
chr3 (32-103)||(12356521-12356592)
chr3 (32-103)||(12363070-12363141)
chr3 (178-240)||(24285125-24285187)
chr3 (13-264)||(11306271-11306516)
chr3 (178-243)||(12201780-12201845)
chr3 (176-244)||(15518498-15518567)
chr3 (193-253)||(17495568-17495629)
chr3 (178-264)||(40511-40599)
chr3 (72-244)||(13314487-13314661)
chr3 (72-244)||(13325402-13325576)
chr3 (179-244)||(13303919-13303985)
chr3 (180-264)||(14648924-14649010)
chr3 (184-264)||(18719759-18719841)
chr3 (178-243)||(12273670-12273735)
chr3 (13-103)||(12469408-12469500)
chr3 (181-264)||(45221436-45221521)
chr3 (180-244)||(17244347-17244413)
chr3 (178-236)||(16383515-16383572)
chr3 (181-264)||(5840686-5840771)
chr3 (193-245)||(12356674-12356726)
chr3 (62-110)||(32388629-32388676)
chr3 (178-240)||(54900764-54900828)
chr3 (193-264)||(54972233-54972305)
chr3 (193-264)||(54974843-54974915)
chr3 (193-264)||(54977453-54977525)
chr3 (178-242)||(13341224-13341288)
chr3 (183-240)||(46724115-46724172)
chr3 (183-264)||(8584033-8584117)
chr3 (201-264)||(11965573-11965637)
chr3 (183-264)||(13969540-13969624)
chr3 (183-264)||(13975019-13975103)
chr3 (183-264)||(14012838-14012922)
chr3 (183-264)||(14089286-14089370)
chr3 (183-238)||(14569252-14569308)
chr3 (180-228)||(14952561-14952609)
chr3 (180-220)||(16798752-16798792)
chr3 (178-233)||(17210497-17210553)
chr3 (178-240)||(18957207-18957273)
chr3 (178-240)||(24123990-24124054)
chr3 (62-110)||(30597474-30597521)
chr3 (183-264)||(49398826-49398910)
chr3 (180-220)||(55293406-55293446)
chr3 (35-110)||(8374583-8374657)
chr3 (137-264)||(14544827-14544955)
chr3 (200-243)||(15012734-15012777)
chr3 (183-244)||(14292160-14292225)
chr3 (180-222)||(18957892-18957934)
chr3 (195-244)||(16830678-16830727)
chr3 (175-220)||(32388717-32388762)
chr3 (183-240)||(54518799-54518856)
chr3 (193-244)||(18757705-18757756)
chr3 (179-243)||(30597567-30597631)
chr3 (180-228)||(39229849-39229896)
chr3 (178-242)||(49162597-49162664)
[»] scaffold0094 (1 HSPs)
scaffold0094 (18-253)||(50558-50795)
[»] scaffold0334 (1 HSPs)
scaffold0334 (13-264)||(7898-8151)
[»] scaffold0556 (3 HSPs)
scaffold0556 (13-241)||(5460-5691)
scaffold0556 (13-99)||(10486-10573)
scaffold0556 (181-241)||(10366-10426)
[»] chr8 (69 HSPs)
chr8 (13-260)||(21686617-21686863)
chr8 (13-260)||(21690941-21691187)
chr8 (62-244)||(19988737-19988922)
chr8 (68-261)||(22385497-22385690)
chr8 (68-261)||(41010003-41010199)
chr8 (62-243)||(25625320-25625496)
chr8 (174-260)||(14595424-14595511)
chr8 (42-128)||(22003316-22003401)
chr8 (175-261)||(22989006-22989094)
chr8 (178-264)||(21322904-21322992)
chr8 (180-243)||(19852938-19853001)
chr8 (180-243)||(19858974-19859037)
chr8 (183-241)||(20005800-20005858)
chr8 (42-128)||(21968349-21968434)
chr8 (42-128)||(21981189-21981274)
chr8 (42-128)||(22011652-22011737)
chr8 (178-245)||(7302266-7302335)
chr8 (178-245)||(21327492-21327561)
chr8 (181-264)||(28852868-28852953)
chr8 (91-243)||(33087552-33087703)
chr8 (179-245)||(45136051-45136119)
chr8 (178-258)||(22176546-22176628)
chr8 (178-245)||(6609365-6609434)
chr8 (180-245)||(21968486-21968551)
chr8 (180-245)||(22011789-22011854)
chr8 (178-245)||(44494696-44494765)
chr8 (13-128)||(10606481-10606600)
chr8 (178-264)||(36601065-36601153)
chr8 (178-264)||(44430817-44430904)
chr8 (178-241)||(20784524-20784587)
chr8 (180-245)||(22248475-22248542)
chr8 (47-89)||(11252433-11252475)
chr8 (183-240)||(21300837-21300895)
chr8 (180-242)||(21981326-21981388)
chr8 (180-242)||(21986245-21986307)
chr8 (182-243)||(23653290-23653352)
chr8 (66-151)||(14058144-14058228)
chr8 (180-244)||(20984511-20984576)
chr8 (62-103)||(21930192-21930233)
chr8 (183-240)||(39362898-39362955)
chr8 (178-261)||(11252547-11252630)
chr8 (178-264)||(11773673-11773761)
chr8 (178-222)||(24708828-24708872)
chr8 (35-90)||(21300697-21300754)
chr8 (178-258)||(21668304-21668386)
chr8 (183-244)||(25110309-25110371)
chr8 (62-103)||(21839061-21839102)
chr8 (192-244)||(27889307-27889360)
chr8 (192-244)||(27947965-27948018)
chr8 (183-264)||(21281425-21281508)
chr8 (178-240)||(23824453-23824517)
chr8 (183-264)||(30767689-30767773)
chr8 (178-264)||(34949602-34949692)
chr8 (180-220)||(44523908-44523948)
chr8 (183-222)||(17613829-17613868)
chr8 (183-241)||(18609587-18609646)
chr8 (183-245)||(20840583-20840646)
chr8 (178-244)||(22064238-22064308)
chr8 (178-242)||(8415584-8415650)
chr8 (68-152)||(21668408-21668491)
chr8 (200-242)||(22522591-22522633)
chr8 (178-220)||(22743184-22743226)
chr8 (178-240)||(29644244-29644306)
chr8 (183-240)||(10949444-10949501)
chr8 (183-240)||(10957449-10957506)
chr8 (178-240)||(29327480-29327544)
chr8 (178-240)||(5239468-5239532)
chr8 (13-103)||(20005919-20006010)
chr8 (183-243)||(43686772-43686832)
[»] scaffold0077 (2 HSPs)
scaffold0077 (62-240)||(24338-24517)
scaffold0077 (62-240)||(18712-18890)
[»] scaffold0023 (1 HSPs)
scaffold0023 (66-261)||(157317-157513)
[»] scaffold0516 (2 HSPs)
scaffold0516 (18-260)||(5553-5794)
scaffold0516 (178-245)||(8263-8332)
[»] scaffold0004 (6 HSPs)
scaffold0004 (62-260)||(130253-130445)
scaffold0004 (174-240)||(115184-115249)
scaffold0004 (175-264)||(320505-320596)
scaffold0004 (175-264)||(326214-326305)
scaffold0004 (200-241)||(382862-382903)
scaffold0004 (200-242)||(383483-383525)
[»] scaffold0506 (1 HSPs)
scaffold0506 (71-261)||(7852-8042)
[»] scaffold0097 (1 HSPs)
scaffold0097 (72-264)||(27296-27491)
[»] scaffold0058 (6 HSPs)
scaffold0058 (18-236)||(40986-41202)
scaffold0058 (178-245)||(33875-33944)
scaffold0058 (181-261)||(15928-16010)
scaffold0058 (62-141)||(17028-17106)
scaffold0058 (62-141)||(23551-23629)
scaffold0058 (181-261)||(23432-23514)
[»] scaffold0026 (5 HSPs)
scaffold0026 (66-216)||(63746-63897)
scaffold0026 (174-260)||(28591-28677)
scaffold0026 (66-240)||(117488-117661)
scaffold0026 (178-264)||(125122-125211)
scaffold0026 (66-240)||(24087-24255)
[»] scaffold0053 (2 HSPs)
scaffold0053 (18-240)||(61529-61746)
scaffold0053 (20-240)||(73419-73634)
[»] scaffold0106 (4 HSPs)
scaffold0106 (62-164)||(47305-47406)
scaffold0106 (178-258)||(28148-28229)
scaffold0106 (180-258)||(35628-35707)
scaffold0106 (183-264)||(37755-37839)
[»] scaffold0001 (3 HSPs)
scaffold0001 (133-260)||(452361-452489)
scaffold0001 (200-258)||(95288-95348)
scaffold0001 (185-236)||(525538-525587)
[»] scaffold0706 (1 HSPs)
scaffold0706 (62-264)||(3860-4063)
[»] scaffold0222 (2 HSPs)
scaffold0222 (30-260)||(27412-27642)
scaffold0222 (180-244)||(22093-22159)
[»] scaffold0081 (2 HSPs)
scaffold0081 (183-260)||(56601-56678)
scaffold0081 (13-103)||(56451-56540)
[»] scaffold0007 (1 HSPs)
scaffold0007 (183-260)||(208234-208311)
[»] scaffold0025 (2 HSPs)
scaffold0025 (133-260)||(76148-76276)
scaffold0025 (68-245)||(70547-70721)
[»] scaffold0102 (2 HSPs)
scaffold0102 (174-253)||(29231-29310)
scaffold0102 (178-260)||(44007-44089)
[»] scaffold0057 (1 HSPs)
scaffold0057 (18-241)||(2495-2715)
[»] scaffold1061 (2 HSPs)
scaffold1061 (174-244)||(731-800)
scaffold1061 (62-103)||(865-906)
[»] scaffold0352 (1 HSPs)
scaffold0352 (30-260)||(6244-6475)
[»] scaffold0331 (1 HSPs)
scaffold0331 (178-260)||(17942-18024)
[»] scaffold0016 (2 HSPs)
scaffold0016 (42-128)||(173566-173651)
scaffold0016 (180-245)||(173702-173767)
[»] scaffold0462 (1 HSPs)
scaffold0462 (91-243)||(9903-10054)
[»] scaffold0113 (2 HSPs)
scaffold0113 (13-103)||(27278-27370)
scaffold0113 (178-251)||(27434-27509)
[»] scaffold0661 (1 HSPs)
scaffold0661 (174-241)||(4757-4824)
[»] scaffold0503 (1 HSPs)
scaffold0503 (62-243)||(3025-3202)
[»] scaffold0395 (2 HSPs)
scaffold0395 (179-241)||(4765-4827)
scaffold0395 (200-242)||(10652-10694)
[»] scaffold0371 (2 HSPs)
scaffold0371 (174-260)||(1581-1667)
scaffold0371 (200-242)||(7815-7857)
[»] scaffold0316 (1 HSPs)
scaffold0316 (180-264)||(198-284)
[»] scaffold0304 (1 HSPs)
scaffold0304 (133-260)||(643-768)
[»] scaffold0244 (2 HSPs)
scaffold0244 (178-240)||(20087-20149)
scaffold0244 (178-240)||(8969-9031)
[»] scaffold0054 (2 HSPs)
scaffold0054 (178-240)||(62453-62515)
scaffold0054 (62-128)||(62342-62407)
[»] scaffold0298 (3 HSPs)
scaffold0298 (13-103)||(14135-14227)
scaffold0298 (13-103)||(17905-17997)
scaffold0298 (180-244)||(1317-1382)
[»] scaffold0205 (1 HSPs)
scaffold0205 (178-258)||(23770-23850)
[»] scaffold0072 (1 HSPs)
scaffold0072 (178-264)||(55354-55442)
[»] scaffold0022 (4 HSPs)
scaffold0022 (35-103)||(39221-39289)
scaffold0022 (35-103)||(137281-137349)
scaffold0022 (193-242)||(39371-39420)
scaffold0022 (193-242)||(137431-137480)
[»] scaffold0326 (4 HSPs)
scaffold0326 (178-241)||(6083-6146)
scaffold0326 (178-241)||(13985-14048)
scaffold0326 (193-253)||(7969-8029)
scaffold0326 (193-253)||(15871-15931)
[»] scaffold0149 (3 HSPs)
scaffold0149 (178-260)||(12300-12383)
scaffold0149 (178-228)||(14466-14516)
scaffold0149 (193-245)||(39137-39190)
[»] scaffold0005 (2 HSPs)
scaffold0005 (62-223)||(18756-18912)
scaffold0005 (20-103)||(264689-264773)
[»] scaffold0348 (1 HSPs)
scaffold0348 (66-128)||(14136-14197)
[»] scaffold0324 (1 HSPs)
scaffold0324 (183-260)||(7789-7867)
[»] scaffold0192 (2 HSPs)
scaffold0192 (37-103)||(6182-6248)
scaffold0192 (200-242)||(20171-20213)
[»] scaffold0751 (1 HSPs)
scaffold0751 (178-243)||(6501-6566)
[»] scaffold0512 (1 HSPs)
scaffold0512 (178-245)||(12028-12097)
[»] scaffold0574 (1 HSPs)
scaffold0574 (178-264)||(6553-6641)
[»] scaffold0511 (1 HSPs)
scaffold0511 (178-241)||(671-735)
[»] scaffold0261 (2 HSPs)
scaffold0261 (178-241)||(11324-11388)
scaffold0261 (178-241)||(19504-19568)
[»] scaffold0141 (1 HSPs)
scaffold0141 (179-245)||(32097-32165)
[»] scaffold0049 (1 HSPs)
scaffold0049 (179-245)||(82647-82715)
[»] scaffold0139 (1 HSPs)
scaffold0139 (178-244)||(16712-16779)
[»] scaffold0091 (2 HSPs)
scaffold0091 (178-241)||(23371-23434)
scaffold0091 (178-241)||(27568-27631)
[»] scaffold1711 (1 HSPs)
scaffold1711 (183-241)||(2-60)
[»] scaffold0201 (3 HSPs)
scaffold0201 (178-240)||(25673-25735)
scaffold0201 (183-240)||(31327-31384)
scaffold0201 (66-103)||(25806-25843)
[»] scaffold0098 (2 HSPs)
scaffold0098 (180-264)||(33572-33658)
scaffold0098 (204-264)||(26769-26830)
[»] scaffold0074 (1 HSPs)
scaffold0074 (178-264)||(16380-16469)
[»] scaffold0039 (1 HSPs)
scaffold0039 (178-240)||(4393-4455)
[»] scaffold1615 (1 HSPs)
scaffold1615 (184-264)||(1075-1156)
[»] scaffold0679 (1 HSPs)
scaffold0679 (181-264)||(3767-3852)
[»] scaffold0461 (2 HSPs)
scaffold0461 (180-244)||(1748-1813)
scaffold0461 (180-244)||(8684-8749)
[»] scaffold0130 (1 HSPs)
scaffold0130 (178-243)||(12115-12180)
[»] scaffold0124 (2 HSPs)
scaffold0124 (178-243)||(15253-15318)
scaffold0124 (62-103)||(15382-15423)
[»] scaffold0031 (3 HSPs)
scaffold0031 (179-239)||(108335-108396)
scaffold0031 (179-239)||(116957-117018)
scaffold0031 (193-244)||(74857-74910)
[»] scaffold1340 (1 HSPs)
scaffold1340 (178-264)||(1832-1920)
[»] scaffold0664 (1 HSPs)
scaffold0664 (178-245)||(7927-7995)
[»] scaffold0003 (1 HSPs)
scaffold0003 (178-264)||(136816-136903)
[»] scaffold1496 (2 HSPs)
scaffold1496 (183-241)||(138-197)
scaffold1496 (30-103)||(3-77)
[»] scaffold1311 (1 HSPs)
scaffold1311 (178-236)||(1790-1846)
[»] scaffold0076 (4 HSPs)
scaffold0076 (176-264)||(52352-52440)
scaffold0076 (183-264)||(30884-30968)
scaffold0076 (183-264)||(36285-36369)
scaffold0076 (68-128)||(52243-52303)
[»] scaffold0017 (1 HSPs)
scaffold0017 (174-233)||(3360-3419)
[»] scaffold1290 (2 HSPs)
scaffold1290 (183-241)||(1933-1991)
scaffold1290 (18-103)||(1786-1872)
[»] scaffold0990 (1 HSPs)
scaffold0990 (178-236)||(3329-3387)
[»] scaffold0034 (3 HSPs)
scaffold0034 (49-103)||(7205-7259)
scaffold0034 (183-264)||(18197-18279)
scaffold0034 (193-263)||(7340-7411)
[»] scaffold0010 (1 HSPs)
scaffold0010 (183-264)||(38248-38330)
[»] scaffold0009 (2 HSPs)
scaffold0009 (66-128)||(253076-253137)
scaffold0009 (180-243)||(252947-253010)
[»] scaffold0008 (1 HSPs)
scaffold0008 (66-128)||(29116-29177)
[»] scaffold0407 (2 HSPs)
scaffold0407 (35-103)||(4882-4951)
scaffold0407 (183-243)||(5022-5084)
[»] scaffold0249 (2 HSPs)
scaffold0249 (62-103)||(7374-7415)
scaffold0249 (180-244)||(8388-8453)
[»] scaffold0235 (2 HSPs)
scaffold0235 (184-264)||(7383-7464)
scaffold0235 (184-264)||(17597-17678)
[»] scaffold0151 (1 HSPs)
scaffold0151 (175-243)||(673-742)
[»] scaffold0138 (1 HSPs)
scaffold0138 (178-245)||(396-464)
[»] scaffold0126 (1 HSPs)
scaffold0126 (178-245)||(37856-37924)
[»] scaffold0109 (1 HSPs)
scaffold0109 (178-264)||(1306-1394)
[»] scaffold0355 (1 HSPs)
scaffold0355 (183-264)||(2189-2272)
[»] scaffold0320 (1 HSPs)
scaffold0320 (186-241)||(12212-12267)
[»] scaffold0301 (2 HSPs)
scaffold0301 (202-260)||(14089-14148)
scaffold0301 (178-251)||(1413-1487)
[»] scaffold1336 (1 HSPs)
scaffold1336 (200-242)||(1522-1564)
[»] scaffold0610 (2 HSPs)
scaffold0610 (183-244)||(4969-5031)
scaffold0610 (62-103)||(5101-5142)
[»] scaffold0253 (1 HSPs)
scaffold0253 (200-242)||(4632-4674)
[»] scaffold0154 (1 HSPs)
scaffold0154 (183-240)||(29201-29259)
[»] scaffold0104 (2 HSPs)
scaffold0104 (158-258)||(25351-25453)
scaffold0104 (200-243)||(42358-42401)
[»] scaffold0002 (1 HSPs)
scaffold0002 (183-264)||(369854-369936)
[»] scaffold0490 (1 HSPs)
scaffold0490 (171-243)||(4159-4231)
[»] scaffold0266 (1 HSPs)
scaffold0266 (67-219)||(22442-22593)
[»] scaffold0178 (2 HSPs)
scaffold0178 (178-242)||(25275-25339)
scaffold0178 (178-242)||(30777-30841)
[»] scaffold0020 (1 HSPs)
scaffold0020 (180-244)||(103594-103659)
[»] scaffold0708 (1 HSPs)
scaffold0708 (183-264)||(171-255)
[»] scaffold0634 (1 HSPs)
scaffold0634 (179-245)||(2020-2088)
[»] scaffold0434 (1 HSPs)
scaffold0434 (201-241)||(4838-4878)
[»] scaffold0214 (2 HSPs)
scaffold0214 (183-243)||(15927-15987)
scaffold0214 (183-243)||(28423-28483)
[»] scaffold0203 (2 HSPs)
scaffold0203 (178-244)||(2990-3058)
scaffold0203 (193-244)||(17761-17813)
[»] scaffold0191 (1 HSPs)
scaffold0191 (183-243)||(6261-6321)
[»] scaffold0188 (1 HSPs)
scaffold0188 (193-244)||(32295-32347)
[»] scaffold0156 (1 HSPs)
scaffold0156 (178-253)||(25035-25111)
[»] scaffold0088 (1 HSPs)
scaffold0088 (183-243)||(31240-31300)
[»] scaffold0050 (1 HSPs)
scaffold0050 (183-264)||(87164-87248)
[»] scaffold0019 (1 HSPs)
scaffold0019 (183-240)||(143343-143402)
[»] scaffold1517 (1 HSPs)
scaffold1517 (183-242)||(543-602)
[»] scaffold0342 (1 HSPs)
scaffold0342 (178-245)||(17529-17601)
[»] scaffold0243 (1 HSPs)
scaffold0243 (183-264)||(8687-8770)
[»] scaffold0167 (1 HSPs)
scaffold0167 (193-258)||(6366-6433)
[»] scaffold0015 (1 HSPs)
scaffold0015 (178-264)||(172463-172547)
[»] scaffold1098 (1 HSPs)
scaffold1098 (66-240)||(1271-1439)
[»] scaffold0323 (1 HSPs)
scaffold0323 (178-264)||(6695-6784)
[»] scaffold0021 (1 HSPs)
scaffold0021 (20-103)||(140916-141000)
[»] scaffold1684 (1 HSPs)
scaffold1684 (66-151)||(1026-1110)
[»] scaffold0947 (1 HSPs)
scaffold0947 (62-103)||(367-408)
[»] scaffold0309 (1 HSPs)
scaffold0309 (171-243)||(5334-5406)
[»] scaffold1488 (1 HSPs)
scaffold1488 (183-264)||(82-166)
[»] scaffold0575 (1 HSPs)
scaffold0575 (200-240)||(765-805)
[»] scaffold0535 (1 HSPs)
scaffold0535 (63-103)||(6546-6586)
[»] scaffold0367 (1 HSPs)
scaffold0367 (183-262)||(7934-8014)
[»] scaffold0220 (1 HSPs)
scaffold0220 (62-98)||(9937-9973)
[»] scaffold0190 (1 HSPs)
scaffold0190 (193-240)||(28056-28104)
[»] scaffold0107 (1 HSPs)
scaffold0107 (182-244)||(42274-42338)
[»] scaffold0067 (3 HSPs)
scaffold0067 (137-212)||(48048-48123)
scaffold0067 (137-212)||(57082-57157)
scaffold0067 (137-212)||(63468-63543)
[»] scaffold0060 (1 HSPs)
scaffold0060 (193-244)||(40674-40726)


Alignment Details
Target: chr1 (Bit Score: 166; Significance: 8e-89; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 20 - 264
Target Start/End: Original strand, 15317016 - 15317258
Alignment:
Q  20 tggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgtt 119  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  15317016 tggaacatgttgatgtagtcctttatttggttgttgaagtaattgatgaggctttt--gccaagattatttattggagaattaatatgttggatgttgtt 15317113  T
Q  120 gttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaa 219  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |||||||||||| ||||||||||||||||    |||||||    
T  15317114 gttatttaaatgttgaaaatattccgctgcaaagttttgatgaaaccgtttaagttgttttttattaaatagttttataatctatttaattttttttgaa 15317213  T
Q  220 aagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||| |||||||||||||||||| || ||||||| | ||||||||    
T  15317214 aagtagtgtgacatgcccgtttgagatatactctgaagtatgttt 15317258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 62 - 241
Target Start/End: Original strand, 11141558 - 11141735
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    |||| |||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| ||||||||| | ||| ||||||||| || | ||||    
T  11141558 ttgacgaggcttttatgccaagattatctattggagaattaacatgttggatgttgttgttatt-aaatgttgata-tattccgctgcaaggttttgatg 11141655  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||| ||| |||||| |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  11141656 aaactgttaaagttggtgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 11141735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 62 - 244
Target Start/End: Original strand, 20942404 - 20942586
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    |||||| |||||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||  |||||||||||  ||||||||||| | ||||    
T  20942404 ttgatgcggcttttatgccaagattatttattggagattaaatatgttggatgttgttgttctttaa--gttgaaaatatttcgctgcaaagttttgatg 20942501  T
Q  162 aaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||   || ||||| |||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  20942502 aaatgattaaagttggttgtttattaaatagttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggg 20942586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 62 - 244
Target Start/End: Original strand, 16884088 - 16884270
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| ||||||||||| | ||| |||||| | ||||    
T  16884088 ttgatgaggcttttatgccaagattatttattggaga-taaatatgttggatgttgttgttatttaaa-gttgaaaatattctgctccaaagttttgatg 16884185  T
Q  162 aaaccgtttaagttg-ttgtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||   || |||||| ||||||||||||||| |||||| ||||||||||||||||||||||  | ||||||||||||||||||||    
T  16884186 aaatgattaaagttggttgtttattaaatagttttatattctatttaagaaattttgaaaatatagtgtgacatgcccgtttggg 16884270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 20087004 - 20087223
Alignment:
Q  18 tttggaacatgttgatatagccctttatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaatatgttggttgtt 116  Q
    ||||||||||| |||| || ||||||||| |||||||||| || || |||||||||||||||||| ||||||||| ||||||||||| |  ||| | |||    
T  20087004 tttggaacatgctgatgtatccctttatt-ggttgttgaattattttgatgaggcttttatgccaggattatttagtggagaattaa-acattgat-gtt 20087100  T
Q  117 gttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaatttt 216  Q
    |||||||||||| ||   ||||||| ||||||||| || | | ||||| |  | || ||| |||||||||||||| |||||| |||||||||||||||||    
T  20087101 gttgttatttaa-tgaa-aaaatattccgctgcaaggttttggtgaaaacaataaaattgatgtttattaaatagttttatattctatttaagaaatttt 20087198  T
Q  217 gaaaagtggtgtgacatgcccgttt 241  Q
    ||||||  |||||||||||||||||    
T  20087199 gaaaagcagtgtgacatgcccgttt 20087223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 21411305 - 21411433
Alignment:
Q  133 tgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgac 231  Q
    ||||||||| ||||||||| || | | ||||||  |||||||| || ||||||||||||| |||||| ||||||||||||| |||||||||| |||||||    
T  21411305 tgaaaatattccgctgcaaggttttggtgaaactatttaagtttgtggtttattaaatagttttatattctatttaagaaaatttgaaaagtagtgtgac 21411404  T
Q  232 atgcccgtttgggacatactcttatgtat 260  Q
    |||||||||||||| ||||| | ||||||    
T  21411405 atgcccgtttgggatatactttgatgtat 21411433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 21746338 - 21746488
Alignment:
Q  92 ttggagaattaatatgttggttgttgttgttatttaaatgttgaaaa-tatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaata 190  Q
    ||||||||||||| |||||| ||||| |||||||||  | ||||||| ||| |||||||||||| | | ||||||  || |||||| ||||||||||| |    
T  21746338 ttggagaattaat-tgttggatgttgatgttatttat-tattgaaaaatattccgctgcaaagttttggtgaaactattaaagttgatgtttattaaaaa 21746435  T
Q  191 gatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |  || || |||||||||||||||||||||||| |||||||||||||||||||    
T  21746436 gtattttattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg 21746488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 31928078 - 31928143
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  31928078 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg 31928143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 21697646 - 21697583
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  21697646 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 21697583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 30492168 - 30492254
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg-gacatactcttatgtat 260  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||  ||||||||||||||||||| || ||||||| ||||||    
T  30492168 tgttgtttattaaatagttttatattctatttaagaaatttttaaaagcagtgtgacatgcccgtttggtgatatactctgatgtat 30492254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 20824996 - 20825084
Alignment:
Q  178 tgtttattaaataga-tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  20824996 tgtttattaaatagaatttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaactactctgatgcatgttt 20825084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 23630464 - 23630404
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccg 238  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||    
T  23630464 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccg 23630404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 23196234 - 23196321
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgtt 263  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| |||||||||    
T  23196234 tgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgtt 23196321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 20848547 - 20848481
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  20848547 tttattaaatagttttatattctatttaagaaaattttgaaaagtagtgtgacatgcccgtttggga 20848481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 12237802 - 12237871
Alignment:
Q  35 tagccctttat-ttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||    
T  12237802 tagccctttatgttgattgttgaattaattgatgaggcttttatgccaagattattttatggagaattaa 12237871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 2341668 - 2341756
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||| ||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  2341668 tgtttattaaatagattttatattctatttaagaatttttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 2341756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 19858688 - 19858600
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||| ||| ||| ||||||| |||||||||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  19858688 tgtttattaaatagtttttatattctatttcagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 19858600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 20838815 - 20838903
Alignment:
Q  178 tgtttattaaataga-tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||| |  |||||| ||| ||||||    
T  20838815 tgtttattaaatagaatttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggaaactactctgatgcatgttt 20838903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 29555091 - 29555179
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || ||||||||||||||||||| |  |||||| ||| ||||||    
T  29555091 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggaaattactctgatgcatgttt 29555179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 241
Target Start/End: Original strand, 7793337 - 7793511
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |  || | ||||| ||||||||||   |  ||||||| ||||||||| || | | ||    
T  7793337 ttgatgaggctttaatgccaggattatttattggagaattaa-acatt-gatgttgatgttatttaa---tgaaaaatattccgctgcaaggttttggtg 7793431  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgttt 241  Q
    ||||   | |||||| ||||||||||||||  ||||| |||||||||| |||||||||| ||  |||||||||||||||||    
T  7793432 aaactaataaagttgatgtttattaaatagtattatattctatttaag-aattttgaaatagcagtgtgacatgcccgttt 7793511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 22000279 - 22000337
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||| |||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  22000279 attaaatagttttatattctatttaagaaattctgaaaagtagtgtgacatgcccgttt 22000337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 22041347 - 22041405
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||| |||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  22041347 attaaatagttttatattctatttaagaaattctgaaaagtagtgtgacatgcccgttt 22041405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 41311655 - 41311590
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| || |||||| |||||||| ||||||||||||||| |||||| |||||||||    
T  41311655 tgttgtttattaaacagttttatattctatttatgaaattttgaaaagtagtgtgatatgcccgtt 41311590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 19852553 - 19852465
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||| ||| ||| ||||||| |||||||||||||| || |||||||||||||||||| ||  |||||| ||||||||||    
T  19852553 tgtttattaaatagtttttatattctattttagaaattttgaaaatgtagtgtgacatgcccgtttgagatttactctgatgtatgttt 19852465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 20032648 - 20032736
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||  | |||||||||||||||||| ||  |||||| ||| ||||||    
T  20032648 tgtttattaaatagattttatattctatttaagaaattttgaaaatatagtgtgacatgcccgtttgagaattactctgatgcatgttt 20032736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 23711983 - 23711923
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccg 238  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||| ||||    
T  23711983 tgtttattaaatagttttatattctatttaagaaattttaaaaagtagtgtgacatacccg 23711923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 18710222 - 18710156
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtg--gtgtgacatgcccgtttggg 244  Q
    |||||||||||| |||||| ||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  18710222 tttattaaatagttttatattctatttaagaaaatttgaaaaatgaagtgtgacatgcccgtttggg 18710156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 21738042 - 21738085
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  21738042 tctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg 21738085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 11156469 - 11156403
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    ||||||||||||| |||| | ||||||||| |||||||||||| || ||||||||||||||||||||    
T  11156469 gtttattaaatagttttacattctatttaataaattttgaaaatgtagtgtgacatgcccgtttggg 11156403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 20639778 - 20639696
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| ||||||||||||| |||||||| || |||||||||||||||| |||   |||||| ||||||||||    
T  20639778 attaaatagttttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgttgggggtttactctgatgtatgttt 20639696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 11810441 - 11810498
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||  || || |||||||||||||||||||||||| ||||||||||||||||    
T  11810441 attaaatagtattttattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 11810498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 11944599 - 11944514
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| || ||||||||||||| |||||||  |||||| ||| ||||||    
T  11944599 ttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccatttgggaattactctgatgcatgttt 11944514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 21729686 - 21729621
Alignment:
Q  200 tctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||  |||||| ||||||||||    
T  21729686 tctatttaagaaaatttgaaatagtagtgtgacatgcccgtttgggatttactctgatgtatgttt 21729621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 43631466 - 43631551
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| || |||||||||||||||||| ||  |||||| ||| ||||||    
T  43631466 ttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgagaattactctgatgcatgttt 43631551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 49327499 - 49327431
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||| ||||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  49327499 tgttggttattaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 49327431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 49327587 - 49327540
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  49327587 ttgatgaggcttttatgccaagatt-tctattggagaattaatatgttg 49327540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 21732355 - 21732285
Alignment:
Q  35 tagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||| |||||||| | ||  ||||||||||||||||||||||||||||   ||||||||||    
T  21732355 tagccctttatttgattgttgaatttatcttgatgaggcttttatgccaagattatttgaaggagaattaa 21732285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 29240471 - 29240534
Alignment:
Q  202 tatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  29240471 tatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 29240534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 31927932 - 31928023
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| ||||||||||| |||| |||||||||  ||| |||||||| || || ||||||||||||||| || ||||||||| ||||| |||||    
T  31927932 caatttttggaacatgctgatgtagcccttttattgattgttgaattattttgatgaggcttttatgtcaggattatttagtggagtattaa 31928023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 45306293 - 45306206
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||||| ||| |||| |||| |||||||||||| |  |||||||||||||||||||||  |||||| ||| ||||||    
T  45306293 gtttattaaatagattttatattctacttaaaaaattttgaaaatgaagtgtgacatgcccgtttgggaattactctgatgcatgttt 45306206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 30491951 - 30492033
Alignment:
Q  22 gaacatgttgatatagccctttatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||| |||| |||||||||  || ||||||||| || || |||||||||||||||||| |||| |||| |||||||||||    
T  30491951 gaacatgctgatgtagcccttttattagttgttgaattattttgatgaggcttttatgccaggattgtttagtggagaattaa 30492033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 47483620 - 47483551
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttga-aaagtggtgtgacatgcccgtttggg 244  Q
    |||||| |||||||||||  ||| ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  47483620 tgtttaataaatagatttttatattctatttaagaaattttgatatagtagtgtgacatgcccgtttggg 47483551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 5380143 - 5380079
Alignment:
Q  178 tgtttattaaatag-atttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||| ||||||  ||||||||| |||||||||||||  ||||||||||||||||||    
T  5380143 tgtttattaaatagtatttatt-tctatttaataaattttgaaaagcagtgtgacatgcccgtttg 5380079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 21541401 - 21541337
Alignment:
Q  178 tgtttattaaatagatttataatctatttaag-aaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||| ||| |||||||| || ||||||||||||||||    
T  21541401 tgtttattaaatagttttatattctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtt 21541337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 36917201 - 36917141
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  36917201 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 36917141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 42096642 - 42096726
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  42096642 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 42096726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 12237932 - 12237991
Alignment:
Q  183 attaaatagatttataatctatttaagaaatttt-gaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||| ||||| |||||||||||||||||| |||| || |||||||||| ||||||    
T  12237932 attaaatagttttatgatctatttaagaaattttggaaacgttgtgtgacatgtccgttt 12237991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 22901374 - 22901413
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaag 222  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  22901374 attaaatagttttatattctatttaagaaattttgaaaag 22901413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 24849532 - 24849473
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  ||||||||||||    
T  24849532 attaaatagttttatcttctatttaagaaattttgaaatgtagtgtagcatgcccgtttg 24849473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 19960669 - 19960607
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| ||||||   ||||||| |||||||||||||| ||||  ||||||||||    
T  19960669 tgtttattaaatagttttatatcttatttaataaattttgaaaagtagtgtagcatgcccgtt 19960607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 11156569 - 11156533
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||||||||||||| |||||||||||    
T  11156569 tgaggcttttatgccaagattattta-tggagaattaa 11156533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 19667252 - 19667326
Alignment:
Q  30 tgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaaga-ttatttattggagaattaa 103  Q
    |||| |||||||||||| |||||||||| | ||  |||||||||||||||||||||| ||||||| |||||||||||    
T  19667252 tgatgtagccctttatt-ggttgttgaatttatgttgatgaggcttttatgccaagatttattta-tggagaattaa 19667326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 24241155 - 24241212
Alignment:
Q  185 taaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||||||| |||||  ||||||||||||||||||||| || ||||  ||||||||||||    
T  24241155 taaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttg 24241212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 21663658 - 21663598
Alignment:
Q  200 tctatttaagaaattttgaaaa-gtggtgtgacatgcccg-tttgggacatactcttatgt 258  Q
    |||||||||||||||||||||| || ||||||||||| || ||||||| ||||||| ||||    
T  21663658 tctatttaagaaattttgaaaatgtagtgtgacatgcacgttttgggatatactctgatgt 21663598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 21920267 - 21920199
Alignment:
Q  176 gttgtttatt-aaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||| |||||| | ||||  ||||||||| |||||||||| || |||| ||||||||||||||    
T  21920267 gttgtttatttaaatagttatatatgctatttaaggaattttgaaatgtagtgtaacatgcccgtttgg 21920199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 21948874 - 21948814
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||| ||||||| || ||||  |||||||||||||    
T  21948874 attaaatagttttattttctatttaagaaaatttgaaatgtagtgtagcatgcccgtttgg 21948814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 21962435 - 21962375
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||| ||||||| || ||||  |||||||||||||    
T  21962435 attaaatagttttattttctatttaagaaaatttgaaatgtagtgtagcatgcccgtttgg 21962375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 21987631 - 21987707
Alignment:
Q  135 aaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaa 211  Q
    ||||||| |||||||||||| | | ||||||  || |||||| ||||||||||||||  || || ||||||||||||    
T  21987631 aaaatattccgctgcaaagttttggtgaaactattaaagttgatgtttattaaatagtattttattctatttaagaa 21987707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 22071546 - 22071499
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgt 228  Q
    |||||||||||| ||||||  |||||||||||||||||||||| |||||    
T  22071546 tttattaaatag-tttatatcctatttaagaaattttgaaaagcggtgt 22071499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 36614455 - 36614391
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||  ||||  |||||||||||||||||||||| || ||||  |||||||||||||    
T  36614455 tttattaaatagtattattttctatttaagaaattttgaaaatgtagtgtagcatgcccgtttgg 36614391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 9006 - 8755
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaag-attatttattggagaattaatatgttgg 111  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9006 caatttttggaacatgttgatgtagccctttatttggttgttgaagtaattgatgaggcttttatgccaagaattatttattggagaattaatatgttgg 8907  T
Q  112 ttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaa 211  Q
     ||||||||||||||||||||||||||||| ||||||||| || | | ||||| |  ||||||| |  |||||||||||| |||||| ||||||||||||    
T  8906 atgttgttgttatttaaatgttgaaaatattccgctgcaaggttttggtgaaa-ctattaagttttgttttattaaatagttttatattctatttaagaa 8808  T
Q  212 attttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  8807 attttgaaaagtagtgtgacatgcccgtttgggatatactctgatgtatgttt 8755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 17930 - 18168
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggt 112  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  17930 caatttttggaacatgttgatgtagccctttatttggttgttgaagtaattgatgaggcttttatgccaagatta-ttattggagaattaatatgttgga 18028  T
Q  113 tgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttg-tttattaaatagatttataatctatttaagaa 211  Q
    ||||||||||||||||||||||||||||| ||||||||| || | | ||||| |  ||||||||||| |||||||||||| |||||| ||||||||||||    
T  18029 tgttgttgttatttaaatgttgaaaatattccgctgcaaggttttggtgaaa-ctattaagttgttgttttattaaatagttttatattctatttaagaa 18127  T
Q  212 attttgaaaagtggtgtgacatgcccgtttgggacatactc 252  Q
    |||||||||||| |||||||||||||||||| || ||||||    
T  18128 attttgaaaagtagtgtgacatgcccgtttgagatatactc 18168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 13 - 263
Target Start/End: Complemental strand, 22859978 - 22859727
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||| |||||||||||||||| ||||||||||||||||||||| | | ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22859978 caatttttggaacatgttgatgtagccctttatttggttgttggatttatgttgatgaggcttttatgccaagattatttattggagaattaatatgttg 22859879  T
Q  111 gttgtt-gttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaag 209  Q
    | |||| || |||| |||| |||||||||||| |||||||||||| | | |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  22859878 gatgtttgtggttaattaa-tgttgaaaatattccgctgcaaagttttg-tgaaactgtttaagttgttgtttattaaatagttttataatctatttaag 22859781  T
Q  210 aaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatgtt 263  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  22859780 aaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgtatgtt 22859727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 62 - 253
Target Start/End: Complemental strand, 24644422 - 24644237
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||| ||||||||||||| | |||| |||||||| || |  || | |||||||||| ||||||    |||||||| |||||||||||| | ||||    
T  24644422 ttgatgaggattttatgccaagactgtttagtggagaatcaa-acatttgatgttgttgtt-tttaaa----gaaaatattccgctgcaaagttttgatg 24644329  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactct 253  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  24644328 aaactgtttaagttgttgtttattaaatagttttataatctatttaagaaattttgaaaagtagtgtgacatgcccgtttgggatatactct 24644237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 72 - 264
Target Start/End: Complemental strand, 20723662 - 20723467
Alignment:
Q  72 ttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgttt 170  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| || |  ||||||   ||     
T  20723662 ttttatgccaagatttaattattggagaattaatatgttggatgttgatgttatttaaatgttgaaaatattccgctgcaaggttttaatgaaatgatta 20723563  T
Q  171 aagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||| |||||||||||||||| ||||||  ||||||||||| |||||||  ||| |||||||||||||||||||||  |||||| ||| ||||||    
T  20723562 aagttggttgtttattaaatagttttatatactatttaagaagttttgaattagtagtgtgacatgcccgtttgggaattactctgatgcatgttt 20723467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 19715353 - 19715544
Alignment:
Q  68 aggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttg-aaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    ||||||||||||||||||||||| ||||||||| | |||||||| ||||||  ||||||||  |||| ||||||| ||||||||| || | |||||||      
T  19715353 aggcttttatgccaagattatttgttggagaataattatgttggatgttgtgattatttaa--gttgaaaaatattccgctgcaaggttttgatgaaatg 19715450  T
Q  167 gtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
     || ||||| |||||||| ||||||| |||||| ||||||||||||||||||||  ||| |||||||||||||||||||||  |||||| ||||    
T  19715451 attaaagttggttgtttactaaatagttttatattctatttaagaaattttgaattagtagtgtgacatgcccgtttgggatttactctgatgt 19715544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 62 - 241
Target Start/End: Original strand, 23672726 - 23672898
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||| | |||| |||||||| || |  || | |||||||||| |||||    |||||||||  ||||||||||| | ||||    
T  23672726 ttgatgaggcttttatgccaagactgtttagtggagaatcaa-acatttgatgttgttgtt-tttaa----tgaaaatatttcgctgcaaagttttgatg 23672819  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||  |||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  23672820 aaacgatttaagttgttgtttattaaataattttataatctatttaagaaattttg-aaagtagtgtgacatgcccgttt 23672898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 19719916 - 19720107
Alignment:
Q  68 aggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttg-aaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    ||||||||||||||||||||||| ||||||||| | |||||| | ||||||  ||||||||  |||| ||||||| ||||||||| || | |||||||      
T  19719916 aggcttttatgccaagattatttgttggagaataattatgttagatgttgtgattatttaa--gttgaaaaatattccgctgcaaggttttgatgaaatg 19720013  T
Q  167 gtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
     || ||||| |||||||| ||||||| |||||| ||||||||||||||||||||  ||| |||||||||||||||||||||  |||||| ||||    
T  19720014 attaaagttggttgtttactaaatagttttatattctatttaagaaattttgaattagtagtgtgacatgcccgtttgggatttactctgatgt 19720107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 245
Target Start/End: Original strand, 19791820 - 19791998
Alignment:
Q  68 aggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttg-aaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    ||||||||||||||||||||||| ||||||||| | |||||| | ||||||  ||||||||  |||| ||||||| ||||||||| || | |||||||      
T  19791820 aggcttttatgccaagattatttgttggagaataattatgttagatgttgtgattatttaa--gttgaaaaatattccgctgcaaggttttgatgaaatg 19791917  T
Q  167 gtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttggga 245  Q
     || ||||| |||||||| ||||||| |||||| ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  19791918 attaaagttggttgtttactaaatagttttatattctatttaagaaattttgaattagtagtgtgacatgcccgtttggga 19791998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 25266822 - 25266736
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||| ||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  25266822 ttgtggtttattaaatagttttatattctatttaagaaaatttgaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 25266736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 23263497 - 23263428
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttggg 244  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  23263497 ttgttgtttattaaatag-tttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttggg 23263428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 23268713 - 23268644
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttggg 244  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  23268713 ttgttgtttattaaatag-tttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttggg 23268644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 28972016 - 28972102
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||  |||||| ||||||||||    
T  28972016 tttattaaatagtttttataatctatttaagaaattttgaaatagtagtgtgacatgcccgtttgggaattactctgatgtatgttt 28972102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 19035009 - 19034900
Alignment:
Q  133 tgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgac 231  Q
    ||||||||| ||||||||| || | | ||||||  || ||||| |||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  19035009 tgaaaatattccgctgcaaggttttggtgaaactattaaagtttgttgttcattaaatagttttatattctatttaagaaattttgaaaagtagtgtgac 19034910  T
Q  232 atgcccgttt 241  Q
    ||| ||||||    
T  19034909 atgtccgttt 19034900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 25036745 - 25036833
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  25036745 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 25036833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 25040852 - 25040940
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  25040852 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 25040940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 20647581 - 20647519
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  20647581 tgtttattaaatagttttataatctatttaagaaattttg-aaagtagtgtgacatgcccgttt 20647519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 20914848 - 20914962
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggt 112  Q
    |||| ||||||||||| |||| |||||||||  |||||||||||| || |||||||||||||||||||| |||| |||| |||| |||||| |  || |     
T  20914848 caatttttggaacatgctgatgtagcccttttattggttgttgaattatttgatgaggcttttatgccaggattgtttagtggaaaattaa-acatttga 20914946  T
Q  113 tgttgttgttatttaa 128  Q
    ||||||||||||||||    
T  20914947 tgttgttgttatttaa 20914962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 22809415 - 22809333
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||||    
T  22809415 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgt 22809333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 23275582 - 23275521
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  23275582 ttgttgtttattaaatag-tttatattctatttaagaaattttgaaaagtagtgtgacatgcc 23275521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 8890633 - 8890713
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||| | ||||||||||||||||||| ||||||| ||||    
T  8890633 tgtttattaaatag-tttatattctatttaagaaaattttgaaaagtagcgtgacatgcccgtttgggatatactctgatgt 8890713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 24503720 - 24503651
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  24503720 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 24503651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 31754976 - 31754907
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  31754976 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 31754907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 19796025 - 19795957
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||| | |||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  19796025 tgtttattaaatagttctatattctatttaagaaaattttgaaaagtagtgtgacatgcccgtttggga 19795957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 20964655 - 20964743
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  20964655 tgtttattaaatagattttatattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 20964743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 23062014 - 23061947
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||||||||||| |||||| ||||||||||||||| |||||| || ||||||||||||||||||||    
T  23062014 tgtttattaaatagttttatattctatttaagaaattatgaaaatgtagtgtgacatgcccgtttggg 23061947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 6031690 - 6031621
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||| ||||    
T  6031690 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgttaggga 6031621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 21906758 - 21906693
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||||||||| |||||| |||||||||||||||||||||| |  ||||||||||||||||||||    
T  21906758 tttattaaatagttttatattctatttaagaaattttgaaaatgaagtgtgacatgcccgtttggg 21906693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 23029690 - 23029775
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  23029690 ttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 23029775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 115 - 264
Target Start/End: Complemental strand, 24942985 - 24942835
Alignment:
Q  115 ttgttgttatttaaatgttgaaaa-tatcccgctgcaaagtctcgatgaaaccgtttaagttg-ttgtttattaaatagatttataatctatttaagaaa 212  Q
    ||||||||||||||  |||||||| ||| ||||||||| || | |||||||   || |||||| ||||| ||||||||| ||||||  ||||||||||||    
T  24942985 ttgttgttatttaa--gttgaaaaatattccgctgcaaggttttgatgaaatgattaaagttggttgttaattaaatagttttatatgctatttaagaaa 24942888  T
Q  213 ttttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
      |||||  ||| |||||||||||||||||||||  |||||| ||||||||||    
T  24942887 aattgaattagtagtgtgacatgcccgtttgggatttactctgatgtatgttt 24942835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 20914987 - 20915055
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||| ||| |||||||||| |||||| ||||||||||||||||||||||   ||||||||||||||||||    
T  20914987 ttgatgtgtattaaatagttttatattctatttaagaaattttgaaaaacagtgtgacatgcccgtttg 20915055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 38932218 - 38932300
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||| | ||||| |||||| ||||||||||||| ||| ||| || ||||||||||| ||||||||| ||||||| ||||||    
T  38932218 tgtttactgaatagttttatattctatttaagaaaattttaaatgtagtgtgacatgctcgtttgggatatactctgatgtat 38932300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 24528100 - 24528036
Alignment:
Q  178 tgtttattaaatag-atttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||  ||||||||||||||||||    
T  24528100 tgtttattaaatagtatttatt-tctatttaagaaattttgaaaagcagtgtgacatgcccgtttg 24528036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 25108126 - 25108203
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactct 253  Q
    |||||||||||||| ||| ||| || ||||||||||||||||||| || ||||||||||||||| ||||| |||||||    
T  25108126 tgtttattaaatagtttttatattcaatttaagaaattttgaaaatgtagtgtgacatgcccgtgtgggatatactct 25108203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 24683319 - 24683379
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||| |||||||  ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  24683319 tttaataaatagtattatattctatttaagaaattttgaaaagcagtgtgacatgcccgtt 24683379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 24651847 - 24651768
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgtatg 261  Q
    ||||||||| |||||| ||||||||||||| ||||||  ||| ||||||||||| |||||||||  |||||| |||||||    
T  24651847 attaaatagttttatattctatttaagaaaatttgaattagtagtgtgacatgcgcgtttgggatttactctgatgtatg 24651768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 19655078 - 19655160
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| |||||| ||||||  ||||||| || |||||||||||||||| ||||  |||||| ||||||||||    
T  19655078 attaaatagttttatattctattgaagaaaaattgaaaatgtagtgtgacatgcccgttggggatttactctgatgtatgttt 19655160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 25590824 - 25590893
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttga-aaagtggtgtgacatgcccgtttggg 244  Q
    |||||| |||||||||||  ||| ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  25590824 tgtttaataaatagatttttatattctatttaagaaattttgatatagtagtgtgacatgcccgtttggg 25590893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 8688292 - 8688207
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| ||| |||| || ||||||||| |||||||||||  |||||| ||| ||||||    
T  8688292 ttattaaatagattttatattctatttaagaaaatttaaaaatgtagtgtgacatacccgtttgggaattactctgatgcatgttt 8688207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 23148016 - 23147975
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  23148016 tctatttaagaaattttgaaaagtagtgtgacattcccgttt 23147975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 23559806 - 23559765
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  23559806 tctatttaagaaattttgaaaagtagtgtgacattcccgttt 23559765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 200079 - 199995
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  200079 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 199995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 6745063 - 6745147
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  6745063 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 6745147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 11465570 - 11465510
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  11465570 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 11465510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 17967011 - 17967095
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  17967011 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 17967095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 43692838 - 43692774
Alignment:
Q  178 tgtttattaaatagatttataatctatttaag-aaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||| ||| |||||||| || ||||||||||||||||    
T  43692838 tgtttattaaatagttttatattctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtt 43692774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 45028067 - 45028024
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  45028067 tgaggcttttatgccaagatt-tctattggagaattaatatgttg 45028024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 21124512 - 21124547
Alignment:
Q  68 aggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||| |||||||||||||||||||||    
T  21124512 aggcttttatgccaggattatttattggagaattaa 21124547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 28351858 - 28351816
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||    
T  28351858 tctatttgagaaattttgaaaagtagtgtgacattcccgtttg 28351816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 29840232 - 29840194
Alignment:
Q  202 tatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  29840232 tatttaaaaaattttgaaaagtagtgtgacatgcccgtt 29840194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 2942375 - 2942318
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||  ||||||||||||||||||||| |  |||| |||||||||||    
T  2942375 attaaatagttttattttctatttaagaaattttgaaatgacgtgtaacatgcccgtt 2942318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 21124605 - 21124654
Alignment:
Q  171 aagttgttgtttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    |||||| ||||||||||||||  || || |||||||||||||||||||||    
T  21124605 aagttgatgtttattaaatagtattttattctatttaagaaattttgaaa 21124654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 22797223 - 22797264
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||||||||||||||||  |||||| ||||    
T  22797223 ttgatgaggcttttatgccaagattattttatggagatttaa 22797264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 22797334 - 22797415
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgtt 263  Q
    |||| |||| |||||| |||||||||||||  |||||   || |||||||||||||||||||||  |||||| |||||||||    
T  22797334 attatatagttttatattctatttaagaaaaattgaacctgtagtgtgacatgcccgtttgggatttactctgatgtatgtt 22797415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 27368263 - 27368327
Alignment:
Q  178 tgtttattaaatagatttataatctatttaag--aaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| ||||||||||  ||||||  ||| || ||||||||||||||||    
T  27368263 tgtttattaaatagttttatattctatttaagaaaaatttaaaaatgtagtgtgacatgcccgtt 27368327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 45013300 - 45013341
Alignment:
Q  260 tgtttctcatcttctgtttgcagacgactgctttctcttttt 301  Q
    ||||||||||||| |||||||||| || ||||||||||||||    
T  45013300 tgtttctcatcttttgtttgcagatgattgctttctcttttt 45013341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 20592168 - 20592208
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    |||||||||||| |||||| ||| |||||||||||||||||    
T  20592168 tttattaaatagttttatattctgtttaagaaattttgaaa 20592208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 44620022 - 44619975
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgt 228  Q
    |||||||||||| ||||||  |||||||||||||||||||||| |||||    
T  44620022 tttattaaatag-tttatatcctatttaagaaattttgaaaagcggtgt 44619975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 43033 - 42781
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaag-attatttattggagaattaatatgttgg 111  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  43033 caatttttggaacatgttgatgtagccctttatttggttgttgaagtaattgatgaggcttttatgccaagaattatttattggaggattaatatgttgg 42934  T
Q  112 ttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttg-ttgtttattaaatagatttataatctatttaaga 210  Q
     |||||||||||||||| |||||||||||| || ||||||||| | | ||||| |  |||||||| || |||||||||||| |||||| |||||||||||    
T  42933 atgttgttgttatttaattgttgaaaatattccactgcaaagttttggtgaaa-ctattaagttgtttttttattaaatagttttatattctatttaaga 42835  T
Q  211 aattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||| |||||||| || ||||||| | ||||||||||||||||||    
T  42834 aattttgaaaagtagtgtgacacgctcgtttggaatatactcttatgtatgttt 42781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 37328 - 37243
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| |||||||||||||  ||||||| || ||||||||| |||||||||||  |||||| ||| ||||||    
T  37328 ttattaaatagattttatattctatttaagaaaacttgaaaatgtagtgtgacatacccgtttgggaattactctgatgcatgttt 37243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 18 - 264
Target Start/End: Original strand, 18170212 - 18170455
Alignment:
Q  18 tttggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttg 117  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18170212 tttggaacatgttgatgtagccctttgtttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggatgttg 18170311  T
Q  118 ttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttg-tttattaaatagatttataatctatttaagaaatttt 216  Q
    ||||||||||||   ||||||||| ||||||||| || | | | ||| |  ||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  18170312 ttgttatttaaa---tgaaaatattccgctgcaaggttttggt-aaaactattaagttgttgttttattaaatagttttatattctatttaagaaatttt 18170407  T
Q  217 gaaaagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||| |||||||||| |||||||||| ||||||| ||||||||||    
T  18170408 gaaaagtagtgtgacatgtccgtttgggatatactctgatgtatgttt 18170455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 18270924 - 18270688
Alignment:
Q  18 tttggaacatgttgatatagccctttat-ttggttgttgaagta-attgatgaggcttttatgccaagattatttattggagaattaatatgttggttgt 115  Q
    ||||||||||| |||| ||||||||| | ||| ||||| || ||  ||||||||||||||| |||| ||||||||| ||||||||||| ||||||| |||    
T  18270924 tttggaacatgatgatgtagccctttttgttgattgtttaattattttgatgaggcttttacgccatgattatttagtggagaattaa-atgttggatgt 18270826  T
Q  116 tgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaag-ttgttgtttattaaatagatttataatctatttaagaaatt 214  Q
    ||||||||||| |||||||||||||| ||||||||| || | | ||||||  || ||| |||||||||||||||||| |||||| |||||||||||||||    
T  18270825 tgttgttattt-aatgttgaaaatattccgctgcaaggttttgttgaaactattaaagtttgttgtttattaaatagttttatattctatttaagaaatt 18270727  T
Q  215 ttgaaaagtggtgtgacatgcccgtttgggacatactct 253  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  18270726 ttgaaaagtagtgtgacatgcccgtttgggatatactct 18270688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 18260959 - 18260718
Alignment:
Q  18 tttggaacatgttgatatagccctttat-ttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaatatgttggttgt 115  Q
    ||||||||||| |||| ||||||||| | ||| ||||| || || || ||||||||||||| |||| ||||||||| ||||||||||| ||||||| |||    
T  18260959 tttggaacatgatgatgtagccctttttgttgattgtttaattattttgatgaggcttttacgccatgattatttagtggagaattaa-atgttggatgt 18260861  T
Q  116 tgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaatt 214  Q
    ||||||||||||| |||||||||||| |||||||   || | | ||||||  || ||||| |||||||||||||||| |||||| |||||||||||||||    
T  18260860 tgttgttatttaa-tgttgaaaatattccgctgcg--gttttgttgaaactattaaagtttgttgtttattaaatagttttatattctatttaagaaatt 18260764  T
Q  215 ttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  18260763 ttgaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 18260718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 62 - 258
Target Start/End: Original strand, 53905869 - 53906058
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||| | |||| |||||||| || |  || | |||||||||| |||||    ||||||||| |||||||||||| | || |    
T  53905869 ttgatgaggcttttatgccaagactgtttagtggagaatcaa-acatttgatgttgttgtt-tttaa----tgaaaatattccgctgcaaagttt-gaag 53905961  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||    
T  53905962 aaactgtttaagttgttgtttattaaatagttttataatctatttaagaaattatgaaaagtagtgtgacatgcccgtttgggatatactctgatgt 53906058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 16484274 - 16484049
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggt 112  Q
    |||| ||||||||||| | || ||||||||||||||||||||||| || ||||||||||||||||| || |||| |||| ||||||||||| |  || ||    
T  16484274 caatttttggaacatgctaatgtagccctttatttggttgttgaattatttgatgaggcttttatgtcaggattgtttagtggagaattaa-acatttgt 16484176  T
Q  113 tgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagattt-ataatctatttaagaa 211  Q
    |||||||||| |||||    ||||||||| ||||||||| || | | ||||||   | || ||||||||||||| |||||||| ||| ||||||||||||    
T  16484175 tgttgttgtt-tttaa----tgaaaatattccgctgcaaggttttggtgaaactaataaaattgttgtttattagatagattttatattctatttaagaa 16484081  T
Q  212 attttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||| |||||||||||||||||||    
T  16484080 attttgaaaagtagtgtgacatgcccgtttgg 16484049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 15324504 - 15324325
Alignment:
Q  66 tgaggcttttatgccaagattat-ttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaa 164  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| || | | |||||    
T  15324504 tgaggcttttatgccaagattaaattattggagaattaatatgttggatgttgctgttatttaaatgttgaaaatattccgctgcaaggttttggtgaaa 15324405  T
Q  165 ccgtttaagttgttg-tttattaaatagatttataatctatttaagaa--attttgaaaa-gtggtgtgacatgcccgttt 241  Q
        ||||||||| | |||||||||||| |||||||||||||||||||   ||||||||| || |||||||||||||||||    
T  15324404 -ttattaagttgtggttttattaaatagttttataatctatttaagaatttttttgaaaatgtcgtgtgacatgcccgttt 15324325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 30873325 - 30873239
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||| ||||||||||||| |||||| ||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| ||||||    
T  30873325 ttgtggtttattaaatagttttatattctatttaagaaaatttaaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 30873239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 16229781 - 16229866
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaa---agtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||||||||| ||||||||||||||||||||||||||||   ||| || |||||||||||||||||| ||||||| ||||||    
T  16229781 tgtttattaaatagttttataatctatttaagaaattttgaaaattagtagtatgacatgcccgtttgggatatactctgatgtat 16229866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 16230608 - 16230429
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaatt--gatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||| |||||||| || |||| ||||| ||||||||||||||| | | |||  |||||||||||||||||||||||||||| |||| |||||||||||||    
T  16230608 caatttttggaacttgctgatgtagcc-tttatttggttgttggatttattttgatgaggcttttatgccaagattatttaatggataattaatatgttg 16230510  T
Q  111 gttg-ttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttg-tttattaaatag 191  Q
    | || |||| |||| || |||||||||| ||| ||||||||| || | | ||||| |  ||||||||||| ||||||||||||    
T  16230509 gatgtttgtggttaatt-aatgttgaaactattccgctgcaaggttttggtgaaa-ctattaagttgttgatttattaaatag 16230429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 30237254 - 30237191
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  30237254 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 30237191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 14992294 - 14992356
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  14992294 gtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 14992356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 15005641 - 15005703
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  15005641 gtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 15005703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 13443713 - 13443650
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  13443713 tgtttattaaatagttttatattctatttaaaaaattttgaaaagtagtgtgacatgcccgttt 13443650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 13451636 - 13451514
Alignment:
Q  137 aatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatag-atttataatctatttaagaaattttgaaaa-gtggtgtgacatg 234  Q
    ||||| |||||||||||| | |||||||| |||||||||| ||||||||||||||  |||||| ||||||||||||   ||||||| || ||||||||||    
T  13451636 aatattccgctgcaaagttt-gatgaaactgtttaagttgatgtttattaaatagtttttatattctatttaagaatgcttgaaaatgtagtgtgacatg 13451538  T
Q  235 cccgtttgggacatactcttatgt 258  Q
    |||||||||||  |||||| ||||    
T  13451537 cccgtttgggatttactctgatgt 13451514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 14479987 - 14479918
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  14479987 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 14479918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 14485030 - 14484965
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| ||||||||||||||||||||| || |||||||||||| ||||||    
T  14485030 tgtttattaaatagttttatattctatttaagaaattttgaaatgtagtgtgacatgcctgtttgg 14484965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 15243743 - 15243674
Alignment:
Q  35 tagccctttat-ttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||    
T  15243743 tagccctttatgttgattgttgaattaattgatgaggcttttatgccaagattattttatggagaattaa 15243674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 55503809 - 55503878
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  55503809 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 55503878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 31132421 - 31132489
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  31132421 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 31132489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 41529729 - 41529817
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || ||||||||||| |||||||||  |||||| ||| ||||||    
T  41529729 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgctcgtttgggaattactctgatgcatgttt 41529817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 4170001 - 4169934
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  4170001 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggg 4169934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 14820953 - 14820797
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||  |||||||||||||||||||| |  ||| | ||||  |||||||||   |  ||||||| ||||||||| || | | ||    
T  14820953 ttgatgaggcttttatgccagaattatttattggagaattaa-acattgat-gttgacgttatttaa---tgaaaaatattccgctgcaaggttttggtg 14820859  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagt 223  Q
    ||||   | |||||| ||||||||||||||  ||||| ||||||||||||||||||||||||    
T  14820858 aaactaataaagttggtgtttattaaatagtattatattctatttaagaaattttgaaaagt 14820797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 14062441 - 14062352
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||| || |||||||||| ||||||||||  |||||| ||| ||||||    
T  14062441 tgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgtccgtttgggaactactctgatgcatgttt 14062352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 14697724 - 14697656
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    ||||||||||| ||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  14697724 gtttattaaattgattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 14697656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 38982702 - 38982774
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  38982702 tttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 38982774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 40908119 - 40908052
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||| || |||||||||||||||||||    
T  40908119 tgtttattaaatagatttcatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgg 40908052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 13886318 - 13886240
Alignment:
Q  26 atgttgatatagccctttat-ttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||| ||||||||| | ||| |||||||| |||||||||||||||||| |||||||||| ||  |||||||||||    
T  13886318 atgttgatgtagccctttttgttgattgttgaattaattgatgaggcttttacgccaagattagtttatggagaattaa 13886240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 14508556 - 14508613
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||||||    
T  14508556 tgtttattaaatag-tttatattctatttaaggaattttgaaaagttgtgtgacatgcc 14508613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 15546079 - 15546033
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaaa 221  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  15546079 tgttgtttattaaatagttttatattctatttaagaaattttgaaaa 15546033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 12931347 - 12931286
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactct 253  Q
    |||||| |||||||||||||||||||||  || ||||||||||||||||||||| |||||||    
T  12931347 tttatattctatttaagaaattttgaaattgtagtgtgacatgcccgtttgggatatactct 12931286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 13045784 - 13045849
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||| ||||||||| |||||| ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  13045784 tgttcattaaatagttttatattctatttaagaaaattttgaaaagtagtgtgacattcccgtttg 13045849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 15306645 - 15306576
Alignment:
Q  35 tagccctttat-ttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||| ||| |||||||| |||||||  |||||||||||||||||||||||  |||||||||||    
T  15306645 tagccctttatgttgattgttgaattaattgagaaggcttttatgccaagattattttatggagaattaa 15306576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 42598394 - 42598479
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| || |||||| ||||||||||||||  |||||| ||| ||||||    
T  42598394 ttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgatatgcccgtttgggaattactctgatgcatgttt 42598479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 13900284 - 13900348
Alignment:
Q  178 tgtttattaaatagatttataatctatttaag-aaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||| ||||||||| |||||| |||||||||| |||||| ||||||| |||||||||||||||||    
T  13900284 tgttcattaaatagttttatattctatttaagaaaatttggaaaagtagtgtgacatgcccgttt 13900348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 16220759 - 16220671
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||| |||| ||||| |||  |||||| ||| ||||||    
T  16220759 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgatatgctcgttttggaattactctgatgcatgttt 16220671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 22726591 - 22726631
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  22726591 tctatttaagaaattttgaaaagtagtgtgacatgcccgtt 22726631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 2585836 - 2585903
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccg-tttgggacatactcttatgt 258  Q
    |||||| |||||||||||||||||||||| || |||||||||||||| ||||||| ||||||| ||||    
T  2585836 tttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgttttgggatatactctgatgt 2585903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 8833286 - 8833235
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatg 234  Q
    ||||||||  |||||| |||||||||||||||||||||||| ||||||||||    
T  8833286 attaaataattttatattctatttaagaaattttgaaaagtagtgtgacatg 8833235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 41405312 - 41405375
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||||||||||||| |||||  ||||||||||||||||||||| || ||||  ||||||||||||    
T  41405312 gtttattaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttg 41405375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 26078256 - 26078339
Alignment:
Q  68 aggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttg-aaaatatcccgctgcaaa 152  Q
    ||||||||||||||||||||||| ||||||||  | |||||||| ||||||| || |||||  |||| ||||||| ||||||||||    
T  26078256 aggcttttatgccaagattatttgttggagaacgattatgttggatgttgttattgtttaa--gttgaaaaatattccgctgcaaa 26078339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 41940000 - 41940065
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||||| ||| |||||||||||||| ||||||| || ||||||||||||| |||||    
T  41940000 tttattaaatagattttatattctatttaagaaatcttgaaaatgtagtgtgacatgcccatttgg 41940065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 2973416 - 2973476
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  2973416 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 2973476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 8833439 - 8833348
Alignment:
Q  13 caatctttggaacatgttgatatagccctt-tatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| ||||||||||| |||| |||||||| |||||| |||||||| || || |||||||||||||||||| || |||||| ||||| |||||    
T  8833439 caatttttggaacatgctgatgtagcccttgtatttgattgttgaattattttgatgaggcttttatgccagga-tatttagtggagtattaa 8833348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 10312809 - 10312761
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgt 228  Q
    |||||||||||| ||||||  |||||||||||||||||||||| |||||    
T  10312809 tttattaaatagttttatatcctatttaagaaattttgaaaagcggtgt 10312761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 19129044 - 19129104
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  19129044 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 19129104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 27850163 - 27850207
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaag 222  Q
    |||||||||||||  |||||| |||||||||||||||||||||||    
T  27850163 tgtttattaaataattttatattctatttaagaaattttgaaaag 27850207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 15243613 - 15243554
Alignment:
Q  183 attaaatagatttataatctatttaagaaatttt-gaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||| || || |||||||||||||||||| |||| || |||||||||||||||||    
T  15243613 attaaatagtttaatgatctatttaagaaattttggaaacgttgtgtgacatgcccgttt 15243554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 15306515 - 15306457
Alignment:
Q  183 attaaatagatttataatctatttaagaaatttt-gaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||| ||||| |||||||||||||||||| |||| || |||||||||||||||||    
T  15306515 attaaatag-tttatgatctatttaagaaattttggaaacgttgtgtgacatgcccgttt 15306457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 16156258 - 16156198
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||| ||| ||  ||||||||    
T  16156258 tgaggcttttatgccaagatt--ttattggagaattaacatgttggatgtggtgattatttaa 16156198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 26078364 - 26078430
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaagtg-gtgtgacatgcccgtttggga 245  Q
    ||||||||||||||| ||| |||||| |||||||||||||  | | |||||||||||||||||||||    
T  26078364 ttattaaatagattttatattctattaaagaaattttgaattgggagtgtgacatgcccgtttggga 26078430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 10687570 - 10687498
Alignment:
Q  183 attaaatagattt--ataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactct 253  Q
    |||||||||||||  ||| ||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||    
T  10687570 attaaatagatttttatattctatttgagaaatttgaaatagtagtgtgacatgcccgtttgggttatactct 10687498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 10901210 - 10901138
Alignment:
Q  183 attaaatagattt--ataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactct 253  Q
    |||||||||||||  ||| ||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||    
T  10901210 attaaatagatttttatattctatttgagaaatttgaaatagtagtgtgacatgcccgtttgggttatactct 10901138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 15406534 - 15406450
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaa 151  Q
    |||||||||||||||| |  ||||||| ||||| |   ||| |||| ||||||||||| ||||| ||||||||||| |||||||||    
T  15406534 tgaggcttttatgccatggatatttatcggagattacttatattggatgttgttgttaattaaa-gttgaaaatattccgctgcaa 15406450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 27904730 - 27904685
Alignment:
Q  200 tctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    ||||||||||||||||||| || || ||||||||||||||||||||    
T  27904730 tctatttaagaaattttgataatgtagtgtgacatgcccgtttggg 27904685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 29856208 - 29856167
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||||||||||| |||||| ||||||||| |||||||    
T  29856208 tctatttaagaaattttaaaaagtagtgtgacattcccgttt 29856167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 49549873 - 49549930
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||  ||||||||||||||||||||| |  |||| |||||||||||    
T  49549873 attaaatagttttattttctatttaagaaattttgaaatgacgtgtaacatgcccgtt 49549930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 11846575 - 11846507
Alignment:
Q  179 gtttattaaatagatttataat-ctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    ||||||||||||| |||||  | |||||||||||| |||||||| |  |||||||||||||||||||||    
T  11846575 gtttattaaatagttttatttttctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttggga 11846507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 13742204 - 13742157
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgt 228  Q
    |||||||||||| ||||||  |||||||||||||||||||||| |||||    
T  13742204 tttattaaatag-tttatatcctatttaagaaattttgaaaagcggtgt 13742157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 21880980 - 21880920
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| || |||  |||||||||||||||||||| || ||||  |||||||||||||    
T  21880980 attaaatagtttcatatgctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 21880920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 33198408 - 33198341
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||| |||||||||||  ||| ||||||||||||||||||| | || ||||  |||||||||||||    
T  33198408 tgtttactaaatagatttttatattctatttaagaaattttgatatgtagtgtagcatgcccgtttgg 33198341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 45003803 - 45003747
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgt 239  Q
    ||||||||| |||||  ||||||||||||||||||||| |  |||| ||||||||||    
T  45003803 attaaatagttttattttctatttaagaaattttgaaatgacgtgtaacatgcccgt 45003747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 3e-76; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 10583339 - 10583590
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggt 112  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  10583339 caatttttggaacatgttgatgtagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattattcattggagaattaatatgttgga 10583438  T
Q  113 tgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttg-tttattaaatagatttataatctatttaagaa 211  Q
    |||||||| |||||||||||||||||||| | ||||||| || | | ||||| |  ||||||||||| |||||||||||  |||||| | ||||||||||    
T  10583439 tgttgttgatatttaaatgttgaaaatattctgctgcaaggttttggtgaaa-ctattaagttgttgttttattaaataattttatattttatttaagaa 10583537  T
Q  212 attttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||| |||| |||| ||||||||||| ||||||| || |||||||    
T  10583538 attttgaaaagtagtgtaacatacccgtttgggatatactctgatttatgttt 10583590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 62 - 260
Target Start/End: Complemental strand, 25395620 - 25395423
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||||| || | ||||    
T  25395620 ttgatgaggcttttatgccaaaattatttattggagaattaatatggtggatgttgttgttatttaa-tgttgaaaatattccgctgcaaggttttgatg 25395522  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||    
T  25395521 aaactgtttaagttgttgtttattgaatagttttataatctatttaagaaattttgaaaagtagtgtgacatgcccgtttgagatatactctgatgtat 25395423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 62 - 260
Target Start/End: Original strand, 19472882 - 19473074
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||| |||||| |||||||| || |  || | |||||||||| |||||    ||||||||| |||||||||||| | ||||    
T  19472882 ttgatgaggcttttatgccaagactatttagtggagaatcaa-acatttgatgttgttgtt-tttaa----tgaaaatattccgctgcaaagttttgatg 19472975  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||  ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||| ||||||| ||||||    
T  19472976 aaattgtttaagttgttgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttggggatatactctgatgtat 19473074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 68 - 264
Target Start/End: Original strand, 14383964 - 14384163
Alignment:
Q  68 aggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| || |  ||||||      
T  14383964 aggcttttatgccaagatttaattattggagaattaatatgttggatgttgatgttatttaaatgttgaaaatattccgctgcaaggttttaatgaaatg 14384063  T
Q  167 gtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
     || ||||| |||||||||||||||| ||||||  |||||||||||||||||||  ||| |||||||||||||||||| ||  |||||| ||| ||||||    
T  14384064 attaaagttggttgtttattaaatagttttatatactatttaagaaattttgaattagtagtgtgacatgcccgtttgagaattactctgatgcatgttt 14384163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 62 - 258
Target Start/End: Complemental strand, 24720212 - 24720023
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||| | |||| |||||||| || |  || | |||||||||| |||||    ||||||||| |||||||||||| | ||||    
T  24720212 ttgatgaggcttttatgccaagactgtttagtggagaatcaa-acatttgatgttgttgtt-tttaa----tgaaaatattccgctgcaaagttt-gatg 24720120  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||| || ||||||| ||||    
T  24720119 aaactgtttaagttgttgtttattaaatagttttataatctatttaagaaattttaaaaagtagtgtgacatgcccgtttgagatatactctgatgt 24720023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 68 - 264
Target Start/End: Original strand, 14375856 - 14376055
Alignment:
Q  68 aggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||| ||||| || |  ||||||      
T  14375856 aggcttttatgccaagatttaattattggagaattaatatgttggatgttgatgttatttaaatgttgaaaatattccgatgcaaggttttaatgaaatg 14375955  T
Q  167 gtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
     || ||||| |||||||||||||||| ||||||  |||||||||||||||||||  ||| | |||||||||||||||||||  |||||| ||| ||||||    
T  14375956 attaaagttggttgtttattaaatagttttatatactatttaagaaattttgaattagtagggtgacatgcccgtttgggaattactctgatgcatgttt 14376055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 18785696 - 18785599
Alignment:
Q  30 tgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||    
T  18785696 tgatgtagccctttatttggttgttgaattaattaatgaggcttttatgccaagatt-tttattggagaattaatatgttggatgttgtggttatttaa 18785599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 243
Target Start/End: Original strand, 22799032 - 22799249
Alignment:
Q  22 gaacatgttgatatagccctttatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttg 120  Q
    ||||||| |||| |||||||||  || ||||||||| || || |||||||||||||||||| |||| |||| |||||||||||     | | ||||||||    
T  22799032 gaacatgctgatgtagcccttttattagttgttgaattattttgatgaggcttttatgccaggattgtttagtggagaattaaaca--tcgatgttgttg 22799129  T
Q  121 ttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    ||||||||   |  ||||||| || |||||| || | | |||||||  | ||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  22799130 ttatttaa---tgaaaaatattccactgcaaggttttggtgaaaccaataaagttgtcgtttattaaatagttttatattctatttaagaaattttgaaa 22799226  T
Q  221 agtggtgtgacatgcccgtttgg 243  Q
    ||| |||||||||||||||||||    
T  22799227 agtagtgtgacatgcccgtttgg 22799249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 242
Target Start/End: Complemental strand, 23104853 - 23104628
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaatatgttgg 111  Q
    |||| ||||||||||| |||| |||||||||  |||||||||||| || || ||||| |||||||||||| |||| |||| ||||||||||| |  |||     
T  23104853 caatttttggaacatgctgatgtagcccttttattggttgttgaattattttgatgaagcttttatgccaggattgtttagtggagaattaa-acattga 23104755  T
Q  112 ttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaa 211  Q
    | |||||||||||||||   |  |||||||  |||||||| || | | ||||||   | ||||||||||||||||||||| |||||| |||||||| |||    
T  23104754 t-gttgttgttatttaa---tgaaaaatatttcgctgcaaggttttggtgaaactaataaagttgttgtttattaaatagttttatattctatttatgaa 23104659  T
Q  212 attttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||| |||||||||| |||||||    
T  23104658 attttgaaaagtagtgtgacatgtccgtttg 23104628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 68 - 264
Target Start/End: Original strand, 19589125 - 19589320
Alignment:
Q  68 aggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||| ||||| || |||||    ||||||||||| ||||||||| || |  ||||||      
T  19589125 aggctttaatgccaagatttaattattggagaattaatatgttggatgttgatgatattt----gttgaaaatattccgctgcaaggttttaatgaaatg 19589220  T
Q  167 gtttaagttg-ttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
     || |||||| ||||||||||||||| ||||||  |||||||||||||||||||  ||| |||||||||||||||||||||  |||||| ||| ||||||    
T  19589221 attaaagttggttgtttattaaatagttttatatactatttaagaaattttgaattagtagtgtgacatgcccgtttgggaattactctgatgcatgttt 19589320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 19448949 - 19448876
Alignment:
Q  30 tgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||    
T  19448949 tgatgtagccctttatttggttgttgaattaattgatgaggcttttatgccaagattactttatggagaattaa 19448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 19450943 - 19450886
Alignment:
Q  30 tgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagatta 87  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19450943 tgatgtagccctttatttggttgttgaattaattgatgaggcttttatgccaagatta 19450886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 19467475 - 19467418
Alignment:
Q  30 tgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagatta 87  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19467475 tgatgtagccctttatttggttgttgaattaattgatgaggcttttatgccaagatta 19467418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 24412966 - 24413025
Alignment:
Q  181 ttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    ||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  24412966 ttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 24413025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 25749306 - 25749133
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaa-tatcccgctgcaaagtctcgatgaaa 164  Q
    |||||||||||||||| |||||||  |||||||||||| | ||| | ||||| |||||||||  | ||||||| ||| ||| ||||| || | | |||||    
T  25749306 tgaggcttttatgccaggattattatttggagaattaa-acgtttgatgttgatgttatttat-tattgaaaaatattccggtgcaaggttttggtgaaa 25749209  T
Q  165 ccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |   | ||||||  |||||||||||||  || || |||||||||||||||||||||||| ||||||||||||||||    
T  25749208 ctaataaagttgaggtttattaaatagtattttattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 25749133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 14595322 - 14595408
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  14595322 tttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 14595408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 17413520 - 17413455
Alignment:
Q  176 gttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  17413520 gttgtttattaaataattttatattctatttaagaaattttgaaaagtagtgtgacatacccgttt 17413455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 19439228 - 19439147
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||||||||||| |||||| ||||||||||||||||||||  ||| |||||||||||||||||||||  |||||| ||||    
T  19439228 tgtttattaaatagttttatattctatttaagaaattttgaattagtagtgtgacatgcccgtttgggatttactctgatgt 19439147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 2707898 - 2707810
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  2707898 tgtttattaaatagattttatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 2707810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 18316687 - 18316751
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  18316687 tgtttattaaatagtttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 18316751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 19818529 - 19818469
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||    
T  19818529 tgaggcttttatgccaagatt--ttattggagaattaatatgttggatgttgtggttatttaa 19818469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 9623379 - 9623464
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||| ||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||| |||  |||||| ||| ||||||    
T  9623379 tttaataaatagttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttaggaattactctgatgcatgttt 9623464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 28707464 - 28707379
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  28707464 ttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 28707379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 8761082 - 8761149
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttg 242  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||| || ||||||||||||||||||    
T  8761082 tgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttg 8761149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 24514486 - 24514570
Alignment:
Q  182 tattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||| ||| |||||||| ||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  24514486 tattaaatagattttatattctatttatgaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 24514570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 9623250 - 9623292
Alignment:
Q  42 ttatttggttgttgaagtaattgatgaggcttttatgccaaga 84  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  9623250 ttatttggttgttgaattaattgatgaggcttttatgccaaga 9623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 18785548 - 18785486
Alignment:
Q  181 ttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||| |||||    
T  18785548 ttattaaatagttttatattctatttaagaaaattttgaaaagtagtgtgacatgcctgtttg 18785486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 23236066 - 23236132
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||| ||||||||||||| |||||||| || ||||||||||||||||||||| ||||||| ||||    
T  23236066 tttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggatatactctgatgt 23236132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 22757898 - 22757810
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaa 151  Q
    |||||||||||||||||||| || ||||||||||||| | | ||| |||| |||| |||||| ||||| || |||||||| |||||||||    
T  22757898 ttgatgaggcttttatgccatgaatatttattggagattaattatattggatgtttttgttaattaaa-gtcgaaaatattccgctgcaa 22757810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 8768819 - 8768886
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttg 242  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||| || |||||||||||| |||||    
T  8768819 tgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgcctgtttg 8768886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 16804063 - 16804019
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaag 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  16804063 tgtttattaaatagttttatattctatttaagaaattttgaaaag 16804019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 16811908 - 16811864
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaag 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  16811908 tgtttattaaatagttttatattctatttaagaaattttgaaaag 16811864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 16828929 - 16828885
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaag 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  16828929 tgtttattaaatagttttatattctatttaagaaattttgaaaag 16828885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 23235653 - 23235725
Alignment:
Q  193 tttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||||||||||||  ||  |||||||||||||||||| ||  |||||| ||||||||||    
T  23235653 tttataatctatttaagaaattttgaattaggagtgtgacatgcccgtttgagaattactctgatgtatgttt 23235725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 29491851 - 29491807
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaag 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  29491851 tgtttattaaatagttttatattctatttaagaaattttgaaaag 29491807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 8717847 - 8717897
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgt 228  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||| ||||    
T  8717847 tgtttattaaatagttttatattctatttaagaaattttaaaaagtagtgt 8717897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 7428852 - 7428767
Alignment:
Q  180 tttattaaataga-tttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||| |||||| ||||||| ||||||||  ||| || |||||||||| ||||||||||  |||||| ||| ||||||    
T  7428852 tttattaaatagattttatattctattttagaaatttgaaaatgtagtgtgacatgtccgtttgggaattactctgatgcatgttt 7428767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 14616933 - 14616986
Alignment:
Q  193 tttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttggga 245  Q
    |||||| |||||||||||||||||||| | || |||||||||||||||||||||    
T  14616933 tttatattctatttaagaaattttgaatatgtagtgtgacatgcccgtttggga 14616986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 14996617 - 14996674
Alignment:
Q  184 ttaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||||||| |||||| |||||||||| ||||||||||| || ||||||||||||||||    
T  14996617 ttaaatagttttatattctatttaaggaattttgaaaatgtagtgtgacatgcccgtt 14996674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 15538279 - 15538239
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  15538279 tttattaaatagttttatattctatttaagaaattttgaaa 15538239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 19448795 - 19448723
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| ||||||||||||| |||||||| || || ||| ||||||||||||||  |||||| ||||||||||    
T  19448795 tttatattctatttaagaaaatttgaaaaagtagtctgatatgcccgtttgggatttactctaatgtatgttt 19448723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 19450789 - 19450717
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| ||||||||||||| |||||||| || || ||| ||||||||||||||  |||||| ||||||||||    
T  19450789 tttatattctatttaagaaaatttgaaaaagtagtctgatatgcccgtttgggatttactctaatgtatgttt 19450717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 24561720 - 24561636
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  24561720 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 24561636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 10464917 - 10464976
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  ||||||||||||    
T  10464917 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttg 10464976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 10471439 - 10471498
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  ||||||||||||    
T  10471439 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttg 10471498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 21680482 - 21680524
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  21680482 tctatttaagaaattttgaaaagcagtgtgacattcccgtttg 21680524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 22757780 - 22757718
Alignment:
Q  184 ttaaatagattt-ataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||||||||| ||| ||||||||||||||||  ||  || |||||||||||||||||||||    
T  22757780 ttaaatagattttatattctatttaagaaatttgaaattgtagtgtgacatgcccgtttggga 22757718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 18136913 - 18136872
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||||||||||||  ||||||||| |||||||    
T  18136913 tctatttaagaaattttgaaaagcagtgtgacattcccgttt 18136872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 25346554 - 25346497
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||  || || |||||||||||||||||| ||||| ||||||||||| ||||    
T  25346554 attaaatagtattttattctatttaagaaattttgtaaagtagtgtgacatgctcgtt 25346497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 12447805 - 12447848
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||    
T  12447805 tgaggcttttatgccaagatt-tctattggagaattagtatgttg 12447848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 19457176 - 19457104
Alignment:
Q  193 tttataatctatttaagaaattttg-aaaagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| ||||||||||||| |||| |||||| || ||| |||||||||| |||  |||||| ||||||||||    
T  19457176 tttatattctatttaagaaaatttgaaaaagtagtctgatatgcccgttttggatttactctaatgtatgttt 19457104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 19467321 - 19467249
Alignment:
Q  193 tttataatctatttaagaaattttg-aaaagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| ||||||||||||| |||| |||||| || ||| |||||||||| |||  |||||| ||||||||||    
T  19467321 tttatattctatttaagaaaatttgaaaaagtagtctgatatgcccgttttggatttactctaatgtatgttt 19467249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 22346017 - 22345985
Alignment:
Q  208 agaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||||| ||||||||||||||||    
T  22346017 agaaattttgaaaagttgtgtgacatgcccgtt 22345985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 23954834 - 23954790
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa 221  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||    
T  23954834 tgtttattaaatagattttatattctatttaagaaatcttgaaaa 23954790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 13 - 263
Target Start/End: Original strand, 1412 - 1664
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||| |||||||||||||||| |||||||||| ||| |||||| | | ||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  1412 caatttttggaacatgttgatgtagccctttacttgattgttggatttatgttgatgaggcttttaagccaagattatttattggagaattaatatgttg 1511  T
Q  111 gttgtt-gttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaag 209  Q
    | |||| || |||| |||| |||||||||||| |||||||||||| |   |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  1512 gatgtttgtggttaattaa-tgttgaaaatattccgctgcaaagtttttctgaaactgtttaagttgttgtttattaaatagttttataatctatttaag 1610  T
Q  210 aaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatgtt 263  Q
    |||||||||||||| ||||||||||||||||||||| ||||| | |||||||||    
T  1611 aaattttgaaaagtagtgtgacatgcccgtttgggatatactatgatgtatgtt 1664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 135; Significance: 2e-70; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 62 - 260
Target Start/End: Complemental strand, 64562 - 64365
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||| || | ||||    
T  64562 ttgatgagacttttatgccaagattatttattggagaattaatatgttggatgttgttgttatt-aaaggttgaaaatattccgctgcaaggttttgatg 64464  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
     ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||| ||||||    
T  64463 gaactgtttaagttgttgtttattaaatagttttataatctatttaagaaattttgaaaagtagtgtgacatgcccgtttgggttatactctgatgtat 64365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 47739 - 47805
Alignment:
Q  200 tctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  47739 tctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 47805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 53145 - 53211
Alignment:
Q  200 tctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  53145 tctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 53211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 93418 - 93480
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||||||||||||  || || |||||||||||||||||||||||  |||| ||||| |||||||    
T  93418 tttattaaatagtattttactctatttaagaaattttgaaaagcagtgtaacatgtccgtttg 93480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 5e-62; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 21574500 - 21574752
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||| |||||||||||||||  ||||||||||||||||||||| | | ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21574500 caatttttggaacatgttgacgtagccctttatttggttgttggatttatgttgatgaggcttttatgccaagattatttattggagaattaatatgttg 21574599  T
Q  111 gttg-ttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttg-tttattaaatagatttataatctatttaa 208  Q
    | || | || |||| || |||||||||||||| ||||||||| || | ||||||| |  ||||||||||| |||||||||||| ||||||||||||||||    
T  21574600 gatgctagtggttaatt-aatgttgaaaatattccgctgcaaggttttgatgaaa-ctattaagttgttgttttattaaatagttttataatctatttaa 21574697  T
Q  209 gaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||| |||||||||| ||||||||| ||||||||||| ||||||| ||||||||||    
T  21574698 gaaa-tttgaaaagtagtgtgacatacccgtttgggatatactctgatgtatgttt 21574752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 68 - 261
Target Start/End: Original strand, 83 - 276
Alignment:
Q  68 aggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    |||||||||  |||||||| | ||||||||||||||||||||||| |||||  |||||||||||||||||||||| | ||||||| || | | ||||||     
T  83 aggcttttacaccaagatttaattattggagaattaatatgttggatgttgacgttatttaaatgttgaaaatattctgctgcaaggttttggtgaaact 182  T
Q  167 gtttaagttgttgttt-attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatg 261  Q
     |||| ||| ||| || ||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||| ||| ||||||| |||||||    
T  183 attta-gttattgattcattaaatagttttgtaatctatttaagaaattttgaaaagt-atgtgacatgcccgttttggaaatactctgatgtatg 276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 20937218 - 20937041
Alignment:
Q  66 tgaggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaa 164  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||| ||||| |||| |||||| ||||||||||| ||||||||| || | |||||||    
T  20937218 tgaggcttttatgccaagatttaattattgg-gaattaatatgttggatgttggtgttgtttaaaggttgaaaatattccgctgcaaggttttgatgaaa 20937120  T
Q  165 ccgtttaagttgttg-tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
        ||||||||| | |||||||||||| ||||||||||||||||| |||||||||| || ||||  |||||||||||||    
T  20937119 -ttcttaagttgtggttttattaaatagttttataatctatttaaggaattttgaaatgtagtgtagcatgcccgtttgg 20937041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 426777 - 426668
Alignment:
Q  133 tgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaa-agtggtgtgac 231  Q
    |||||||||  ||||||||||| | |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||    
T  426777 tgaaaatatttcgctgcaaagttttgatgaaactgtttaagttgttgtttattaaatagttttataatctatttaagaaattttgaaatagcagtgtgac 426678  T
Q  232 atgcccgttt 241  Q
    ||||||||||    
T  426677 atgcccgttt 426668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 241
Target Start/End: Original strand, 6405041 - 6405223
Alignment:
Q  62 ttgatgaggcttttatgccaaga-ttatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgat 160  Q
    |||||||| |||||||||||||| |||||||||||||| | | |||||||| |||||||||||||| || ||||||||||| |||||||||||| | |||    
T  6405041 ttgatgagacttttatgccaagaattatttattggagattaattatgttggatgttgttgttatttgaa-gttgaaaatattccgctgcaaagttttgat 6405139  T
Q  161 gaaaccgtttaagtt-gttgtttattaaatagatttataatctattt-aagaaattttgaaaa-gtggtgtgacatgcccgttt 241  Q
    ||||   || ||||| |||||||||||||||| |||||| ||||||| || | |||||||||| || ||||||||||| |||||    
T  6405140 gaaatgattaaagttagttgtttattaaatagttttatattctatttaaatatattttgaaaatgtagtgtgacatgctcgttt 6405223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 22313387 - 22313557
Alignment:
Q  73 tttatgccaaga-ttatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgttta 171  Q
    |||||||||||| ||| ||||||||||||||||  ||||| ||| || |||||||||| ||||||||||| ||||||||| || | |||||||    |||    
T  22313387 tttatgccaagaattaattattggagaattaattagttggatgtggt-gttatttaaaggttgaaaatattccgctgcaaggttttgatgaaa-ttatta 22313484  T
Q  172 agttgttg-tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||| | |||||| ||||| |||||||||||||||||||||||||||| || ||||  |||||||||||||    
T  22313485 agttgtggttttattgaatagttttataatctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 22313557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 23433505 - 23433588
Alignment:
Q  177 ttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    ||||| ||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||    
T  23433505 ttgttcattaaatagttttatattctatttaagaaattttaaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 23433588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 23444870 - 23444953
Alignment:
Q  177 ttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    ||||| ||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||    
T  23444870 ttgttcattaaatagttttatattctatttaagaaattttaaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 23444953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 25013139 - 25013075
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  25013139 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttg 25013075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 20842685 - 20842602
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||| | ||||||| ||||||    
T  20842685 tgtttattaaatagttttatattctatttaagaaaattttgaaaagttgtgtgacatgcccgtttggaatatactctgatgtat 20842602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 23562261 - 23562344
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||||||||| |||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  23562261 tgtttattaaatagttttatattatatttaagaaaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 23562344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 240
Target Start/End: Complemental strand, 20831336 - 20831158
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    |||||||||||||||||| |||| ||||| ||||||||| | |||||||| ||||||| |||||||||| |  ||||||  |||||||||  | | ||||    
T  20831336 ttgatgaggcttttatgctaagactatttgttggagaataattatgttggatgttgttattatttaaat-tgaaaaataatccgctgcaagattttgatg 20831238  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtg--gtgtgacatgcccgtt 240  Q
    |||   || |||||| |  ||||||||||| ||||||  |||||||||||||||| |||||||  |||||||||| |||||    
T  20831237 aaatgattaaagttggttgttattaaatagttttatatgctatttaagaaatttt-aaaagtgtagtgtgacatgtccgtt 20831158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 22759855 - 22759943
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  22759855 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 22759943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 18818415 - 18818350
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||  | ||||||||||||||||    
T  18818415 tgtttattaaatagttttatattctatttaagaaattttgaaaagtaatctgacatgcccgtttgg 18818350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 22788182 - 22788125
Alignment:
Q  261 gtttctcatcttctgtttgcagacgactgctttctcttttttaaggcggaggaaaatc 318  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||    
T  22788182 gtttctcatcttctgtttgtagacgactgctttctcctttttaaggcggaagaaaatc 22788125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 22880067 - 22879998
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  22880067 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 22879998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 33474545 - 33474633
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  33474545 tgtttattaaatagattttatattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 33474633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 43120211 - 43120143
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  43120211 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 43120143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 21905950 - 21906021
Alignment:
Q  172 agttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||  ||||| |||||||||||| ||||||    
T  21905950 agttgatgtttattaaatagttttatattctatttaagaaattttagaaagtagtgtgacatgcctgtttgg 21906021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 22008544 - 22008627
Alignment:
Q  183 attaaatagattt-ataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||| ||| ||||||||||||||||||||  ||| |||||||||||||||||||||  |||||| ||||||||||    
T  22008544 attaaatagattttatattctatttaagaaattttgaattagtagtgtgacatgcccgtttgggatttactctgatgtatgttt 22008627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 21872350 - 21872288
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||||||| |||||| ||||||||||||  |||||||||| |||||||||||||||||    
T  21872350 gtttattaaatagttttatattctatttaagaagatttgaaaagtagtgtgacatgcccgttt 21872288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 21876630 - 21876568
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||||||| |||||| ||||||||||||  |||||||||| |||||||||||||||||    
T  21876630 gtttattaaatagttttatattctatttaagaagatttgaaaagtagtgtgacatgcccgttt 21876568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 27636280 - 27636365
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||| |||| |  |||||||||||||||||    
T  27636280 tttattaaatagtttttataatctatttaagaaattttgaaatagtagtgtgacatgcccg-ttggaaattactcttatgtatgttt 27636365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 43244399 - 43244485
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  43244399 tttattaaatagattttatattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 43244485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 19075494 - 19075409
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  19075494 ttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 19075409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 6728907 - 6728995
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||| || |||||||||| ||||||||||  |||||| ||| ||||||    
T  6728907 tgtttattaaatagattttatattctatttaataaattttgaaaatgtagtgtgacatgtccgtttgggaattactctgatgcatgttt 6728995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 43123744 - 43123676
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttggga 245  Q
    ||||||||||||||||| ||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  43123744 gtttattaaatagattttatattctatttaagaaattttgaaattgtagtgtgacatgcccgtttggga 43123676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 10034618 - 10034555
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||| |||||| |||||| |||||||||||||||||||||||| | |||||||||| ||||    
T  10034618 tgtttatgaaatagttttatattctatttaagaaattttgaaaagtagcgtgacatgcctgttt 10034555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 15194708 - 15194767
Alignment:
Q  182 tattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||| ||||| |||||| | |||||||||||||||||||||| |||||||||||||||||    
T  15194708 tattcaatagttttatattatatttaagaaattttgaaaagtagtgtgacatgcccgttt 15194767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 21662032 - 21661940
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaa---ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| |||||||| || |||| || |||||||||||||||||| | | |   |||||||||||||||||||||||||||||| |||||||||||    
T  21662032 caatttttggaacttgctgatgtaaccctttatttggttgttggatttatttttgatgaggcttttatgccaagattattta-tggagaattaa 21661940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 19362246 - 19362149
Alignment:
Q  30 tgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||| ||||||||| |||| |||||| | | | || ||||||||||||||||||||| | ||| ||||||||| |||||||| |||||| |||||||||    
T  19362246 tgatgtagccctttgtttgattgttggatttaatgttgaggcttttatgccaagatt-tctatgggagaattattatgttggatgttgtggttatttaa 19362149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 19802397 - 19802503
Alignment:
Q  30 tgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaa 129  Q
    |||| ||||||||| |||| |||||| | | | || ||||||||||||||||||||| | ||||||||||||| |||||||  |||||| ||||||  ||    
T  19802397 tgatgtagccctttgtttgattgttggatttaatgttgaggcttttatgccaagatt-tctattggagaattattatgttgaatgttgtggttatt--aa 19802493  T
Q  130 tgttgaaaat 139  Q
    ||||||||||    
T  19802494 tgttgaaaat 19802503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 10034730 - 10034689
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  10034730 ttgatgaggcttttatgccaggattatttattggagaattaa 10034689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 31253684 - 31253769
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaagtg-gtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||  | |||||||||||||||||||||  |||||| ||| ||||||    
T  31253684 ttattaaatagattttatattctatttaagaaaatttgaaaatggagtgtgacatgcccgtttgggaattactctgatgcatgttt 31253769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 5342323 - 5342370
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  5342323 ttgatgaggcttttatgccaagatt-tctattggagaattaatatgttg 5342370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 5342411 - 5342479
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||| ||||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  5342411 tgttggttattaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 5342479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 22237869 - 22237941
Alignment:
Q  193 tttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| ||||||||||||| ||||||  ||| ||||||||||| |||||||||  |||||||||||||||||    
T  22237869 tttatattctatttaagaaaatttgaattagtagtgtgacatgctcgtttgggatttactcttatgtatgttt 22237941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 29326368 - 29326455
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||| ||||| ||| |||||||||||||||||||||| |  ||||||||| |||||||||||  |||||| ||| ||||||    
T  29326368 gtttattaaattgattttatattctatttaagaaattttgaaaatgaagtgtgacatacccgtttgggaattactctgatgcatgttt 29326455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 21494429 - 21494365
Alignment:
Q  178 tgtttattaaatag-atttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||  |||||||||||| |||||    
T  21494429 tgtttattaaatagtatttatt-tctatttaagaaattttgaaaagcagtgtgacatgcctgtttg 21494365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 21902426 - 21902467
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  21902426 ttgatgaggcttttatgccaggattatttattggagacttaa 21902467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 1858245 - 1858329
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  1858245 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 1858329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 21676214 - 21676278
Alignment:
Q  178 tgtttattaaatagatttataatctatttaag-aaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||| ||| |||||||| || ||||||||||||||||    
T  21676214 tgtttattaaatagttttatattctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtt 21676278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 22233305 - 22233377
Alignment:
Q  193 tttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| ||||||||||||| ||||||  ||| ||||||||||| |||||||||  |||||| ||||||||||    
T  22233305 tttatattctatttaagaaaatttgaattagtagtgtgacatgctcgtttgggatttactctgatgtatgttt 22233377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 22590853 - 22590892
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaag 222  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  22590853 attaaatagttttatattctatttaagaaattttgaaaag 22590892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 22594408 - 22594447
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaag 222  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  22594408 attaaatagttttatattctatttaagaaattttgaaaag 22594447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 4396877 - 4396835
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    |||||||||||||| |||||| || ||||||||||||||||||    
T  4396877 tgtttattaaatagttttatattccatttaagaaattttgaaa 4396835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 17023582 - 17023624
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  17023582 tctatttaagaaattttgaaaagcagtgtgacattcccgtttg 17023624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 21636790 - 21636832
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  21636790 tctatttaagaaattttgaaaagcagtgtgacattcccgtttg 21636832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 17265432 - 17265482
Alignment:
Q  184 ttaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||| |||||  |||||||||||||||||| | ||||||||||||||||    
T  17265432 ttaaatagttttat--tctatttaagaaattttgtatagtggtgtgacatgcc 17265482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 17271914 - 17271964
Alignment:
Q  184 ttaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||| |||||  |||||||||||||||||| | ||||||||||||||||    
T  17271914 ttaaatagttttat--tctatttaagaaattttgtatagtggtgtgacatgcc 17271964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 21661861 - 21661812
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgttt 241  Q
    |||||| ||||||||||||| |||||||| || |||||||||||||||||    
T  21661861 tttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgttt 21661812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 24618398 - 24618451
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||||  || || ||||||||||||| |||||||||| ||||||||||||    
T  24618398 attaaatagtattttattctatttaagaaactttgaaaagtagtgtgacatgcc 24618451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 24714629 - 24714682
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||||  || || ||||||||||||| |||||||||| ||||||||||||    
T  24714629 attaaatagtattttattctatttaagaaactttgaaaagtagtgtgacatgcc 24714682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 24747657 - 24747710
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||||  || || ||||||||||||| |||||||||| ||||||||||||    
T  24747657 attaaatagtattttattctatttaagaaactttgaaaagtagtgtgacatgcc 24747710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 7774355 - 7774423
Alignment:
Q  176 gttgtttatt-aaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||| |||||| ||||||  ||||||||| |||||||||| || ||||  |||||||||||||    
T  7774355 gttgtttatttaaatagttttatatgctatttaaggaattttgaaatgtagtgtagcatgcccgtttgg 7774423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 16775774 - 16775834
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||||||||| |  ||||  |||||||||||||    
T  16775774 attaaatagttttattttctatttaagaaattttgaaatgaagtgtagcatgcccgtttgg 16775834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 18941760 - 18941803
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||    
T  18941760 tgaggcttttatgccaagatt-tctattggagaattattatgttg 18941803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 18941850 - 18941913
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||| |||||  ||||||||||||| ||||||| || ||||  |||||||||||||    
T  18941850 gtttattaaatagttttattttctatttaagaaa-tttgaaatgtagtgtagcatgcccgtttgg 18941913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 23077009 - 23077068
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttg--aaaagtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||| ||||||||||| ||||||  || ||| ||||||||||||||||    
T  23077009 attaaatagttttatattctatttaagagattttggaaatagtagtgtgacatgcccgtt 23077068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 57 - 264
Target Start/End: Complemental strand, 1670 - 1462
Alignment:
Q  57 agtaattgatgaggcttttatgccaaga-ttatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtc 155  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||     
T  1670 agtaattgatgaggcttttatgccaagaattatttgttggagaattaatatgttggaagttgttgttatttaaatgttgaaaatattccgctgcaaggtt 1571  T
Q  156 tcgatgaaaccgtttaagttgttgttt-attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactctt 254  Q
    | | ||||||  || ||||| |||||| ||||||||| |||||| |||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||     
T  1570 ttggtgaaactatt-aagtttttgttttattaaatagttttatattctatttaagaaatttggaaaagtagtgtgacatgcccatttgggatatactctg 1472  T
Q  255 atgtatgttt 264  Q
    ||||||||||    
T  1471 atgtatgttt 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 30 - 260
Target Start/End: Complemental strand, 51232 - 51003
Alignment:
Q  30 tgatatagccctttat-ttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||| ||||||||| | ||| |||||||| ||||||||||||||||||||| |||||| |||  ||||| |||||   |||| | ||||||||| |||||    
T  51232 tgatgtagccctttttgttgattgttgaattaattgatgaggcttttatgctaagatttttttatggaggattaaacggttgat-gttgttgttgtttaa 51134  T
Q  129 atgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgt 228  Q
     |||||||||||| |||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||    
T  51133 -tgttgaaaatattccgctgcaaagttttgatgaaactgtttaagttgttgtttattaaatagttttataatctatttaagaaattttgaaaagtagcgt 51035  T
Q  229 gacatgcccgtttgggacatactcttatgtat 260  Q
    ||||||||||||||||  ||||||| ||||||    
T  51034 gacatgcccgtttgggctatactctaatgtat 51003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 44994 - 44929
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| ||||||||||||||||||||| || || |||||||||| |||||    
T  44994 tgtttattaaatagttttatattctatttaagaaattttgaaacgtagtatgacatgcccatttgg 44929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 105; Significance: 2e-52; HSPs: 7)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 62 - 244
Target Start/End: Original strand, 197986 - 198169
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| ||||||||||| |||||||||||| | ||||    
T  197986 ttgatgaggcttttatgccaagattatttattggagattaaatatgttggatgttgttgttatttaaa-gttgaaaatattccgctgcaaagttttgatg 198084  T
Q  162 aaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||   || | ||| |||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  198085 aaatgattaatgttggttgtttattaaatagttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggg 198169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 146528 - 146461
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  146528 tgtttattaaatagttttataatctatttaagaaattttgaaaagtagtgtgacatgcccgtttggga 146461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 57424 - 57504
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||||||||||| |||||  ||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||    
T  57424 tgtttattaaatagttttatgttctatttaagaaaatttgaaaagtagtgtgacatgcccgtttgggatatactctgatgt 57504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 251406 - 251318
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||| | ||||||||||    
T  251406 tgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactttgatgtatgttt 251318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 258025 - 257937
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||| ||||||||||||||  |||||| ||| ||||||    
T  258025 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgatatgcccgtttgggaattactctgatgcatgttt 257937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 146683 - 146592
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaatt--gatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| |||||||||||||||| |||||||| |||| ||||||| | | |||  |||||||||||||||||||||||||||  |||||||||||    
T  146683 caatttttggaacatgttgatgtagccctt-atttagttgttggatttattttgatgaggcttttatgccaagattattttatggagaattaa 146592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 175300 - 175384
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  175300 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 175384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 88)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 260
Target Start/End: Original strand, 14179508 - 14179753
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||| |||||||||||||||| ||||||||||||||||||||| | | ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14179508 caatttttggaacatgttgatgtagccctttatttggttgttggatttatgttgatgaggcttttatgccaagattatttattggagaattaatatgttg 14179607  T
Q  111 gttg-ttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgttta-agttgttgtttattaaatagatttataatctatttaa 208  Q
    | || |||| |||| || |||||||||||||| |||||||||| | |  |||      ||||  |  | |||||||||||||| ||||||||||||||||    
T  14179608 gatgtttgtggttaatt-aatgttgaaaatattccgctgcaaattattaatg-----ttttatggaagatgtttattaaatagttttataatctatttaa 14179701  T
Q  209 gaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||    
T  14179702 gaaattttgaaaagtagtgtgacatgctcgtttgggatatactctgatgtat 14179753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 62 - 258
Target Start/End: Original strand, 11882076 - 11882264
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||| ||||||||||||||| |||| |||||||| || |  || | |||||||||| |||||    ||||||||| |||||||||||| | ||||    
T  11882076 ttgatgaggtttttatgccaagattgtttagtggagaatcaa-acatttgatgttgttgtt-tttaa----tgaaaatattccgctgcaaagttt-gatg 11882168  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  11882169 aaactgtttaagttgttgtttattaa-tagttttataatctatttaagaaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgt 11882264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 16074624 - 16074696
Alignment:
Q  171 aagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  16074624 aagttgttgtttattaaatagttttatattctatttaagaaattttgaaaagcagtgtgacatgcccgtttgg 16074696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 15438270 - 15438360
Alignment:
Q  171 aagttgttgtttattaaatagatttataatctatttaagaaattttg-aaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||| ||| |||||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||    
T  15438270 aagttgtttttttttaaatagttttatattctatttaagaaattttggaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 15438360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 15098573 - 15098682
Alignment:
Q  133 tgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgac 231  Q
    ||||||||| ||||||||| || | | ||||||  || ||||| |||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  15098573 tgaaaatattccgctgcaaggttttggtgaaactattaaagtttgttgttcattaaatagttttatattctatttaagaaattttgaaaagtagtgtgac 15098672  T
Q  232 atgcccgttt 241  Q
    ||||||||||    
T  15098673 atgcccgttt 15098682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 15086676 - 15086779
Alignment:
Q  137 aatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgc 235  Q
    ||||| |||||||||||| | |||||||| ||||| |||| |||||||||||||  |||||| |||||||||||||||||||||| || |||||||||||    
T  15086676 aatattccgctgcaaagttt-gatgaaactgtttaggttgatgtttattaaataattttatattctatttaagaaattttgaaaatgtagtgtgacatgc 15086774  T
Q  236 ccgtt 240  Q
    |||||    
T  15086775 ccgtt 15086779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 12694108 - 12694045
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  12694108 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 12694045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 82698 - 82826
Alignment:
Q  133 tgaaaatatcccgctgcaaagtctcgatgaaaccgtttaag-ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgac 231  Q
    ||||||||| ||||||||| || | | ||||||  || ||| |||||||| ||||||||| ||| |||||||||||||||||||| |||||  |||||||    
T  82698 tgaaaatattccgctgcaaggttttggtgaaactattaaaggttgttgttcattaaatagttttgtaatctatttaagaaattttaaaaagcagtgtgac 82797  T
Q  232 atgcccgtttgggacatactcttatgtat 260  Q
    || ||||||| ||| ||||||| ||||||    
T  82798 attcccgtttcggagatactctgatgtat 82826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 12546687 - 12546619
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  12546687 tgtttattaaatagttttatattctatttaagaaaattttgaaaagtagtgtgacatgcccgtttggga 12546619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 16185124 - 16185036
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  16185124 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 16185036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 46349407 - 46349495
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  46349407 tgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 46349495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 15105018 - 15105085
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||||| | |||||||||||||||    
T  15105018 ttgttgttcattaaatagttttatattctatttaagaaattttgaaaagtagcgtgacatgcccgttt 15105085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 16476770 - 16476833
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  16476770 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgtccgttt 16476833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 3327246 - 3327180
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||| |||||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  3327246 tttattaaatagttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 3327180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 125253 - 125322
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  125253 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 125322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 261
Target Start/End: Original strand, 11220693 - 11220824
Alignment:
Q  129 atgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgttt-attaaatagatttataatctatttaagaaattttgaaaagtggtg 227  Q
    ||||||||||||| ||||||||| || | | ||||||  || ||||| ||| || ||||||| | ||||||||||||||||||||||||||||||| |||    
T  11220693 atgttgaaaatattccgctgcaaggttttggtgaaactatt-aagttattgattcattaaattgttttataatctatttaagaaattttgaaaagtagtg 11220791  T
Q  228 tgacatgcccgtttgggacatactcttatgtatg 261  Q
    ||||||| |||||| ||| ||||| | |||||||    
T  11220792 tgacatg-ccgttttggaaatactatgatgtatg 11220824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 10305448 - 10305368
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||||    
T  10305448 tttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgt 10305368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 10306080 - 10306160
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||||    
T  10306080 tttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgt 10306160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 21744430 - 21744498
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  21744430 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 21744498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 46624491 - 46624423
Alignment:
Q  36 agccctttat-ttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||||    
T  46624491 agccctttatgttggttgttgaattaattgatgagtcttttatgccaagattattttatggagaattaa 46624423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 46682856 - 46682924
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||| | |||||||    
T  46682856 tgttgtttattaaatagttttatattctatttaagaaattttaaaaagtagtgtgacatacacgtttgg 46682924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 8775299 - 8775233
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||    
T  8775299 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg 8775233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 16188254 - 16188362
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||| |||||||  ||| ||| ||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||   |||||||||| ||| |     
T  16188254 caatttttggaatttgtggatgtagccctttatttggttgttgaatttatcttgatgaggcttttatgccaagattatttgaaggagaattaa-atggtt 16188352  T
Q  111 gttgttgttg 120  Q
    ||||||||||    
T  16188353 gttgttgttg 16188362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 16576141 - 16576203
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  16576141 tgtttattaaatagttttatattctatttaagaaattttgaaaagcagtgtgtcatgcccgtt 16576203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 16589521 - 16589459
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  16589521 tgtttattaaatagttttatattctatttaagaaattttgaaaagcagtgtgtcatgcccgtt 16589459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 38827212 - 38827126
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  38827212 tttattaaatagattttatattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 38827126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 46624362 - 46624304
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  46624362 attaagtagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 46624304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 11395352 - 11395437
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  11395352 ttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 11395437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 12802184 - 12802241
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||    
T  12802184 attaaatagttttatattctatttaagaaattttgaaaagcagtgtgacatgcccgtt 12802241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 19145068 - 19144999
Alignment:
Q  171 aagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||| ||||||||||||||  || || |||||||||||||||||||||||| ||||| ||||||||||    
T  19145068 aagttgatgtttattaaatagtattttattctatttaagaaattttgaaaagtagtgtggcatgcccgtt 19144999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 20744467 - 20744398
Alignment:
Q  171 aagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||| ||||||||||||||  || || |||||||||||||||||||||||| ||||| ||||||||||    
T  20744467 aagttgatgtttattaaatagtattttattctatttaagaaattttgaaaagtagtgtggcatgcccgtt 20744398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 12802032 - 12802123
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| ||||||| ||| |||| |||||||||  ||| |||||||| ||||| |||||||||||||||||| ||||||||| ||||| |||||    
T  12802032 caatttttggaaaatgctgatttagcccttttattgattgttgaattaattcgatgaggcttttatgccaggattatttagtggagtattaa 12802123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 14583318 - 14583381
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| ||||||||||||||||| | ||||  ||||||||||||||||    
T  14583318 tgtttattaaatagttttatattctatttaagaaattttaacaagtattgtgacatgcccgttt 14583381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 240
Target Start/End: Complemental strand, 19151466 - 19151297
Alignment:
Q  70 gcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaa-tatcccgctgcaaagtctcgatgaaaccgt 168  Q
    |||||||||||| |||||||  |||||||||||| | ||| | ||||| |||||||||  | | ||||| ||| |||||||||||| | |  |||||       
T  19151466 gcttttatgccaggattattatttggagaattaa-acgtttgatgttgatgttatttat-tatcgaaaaatattccgctgcaaagttttggcgaaactaa 19151369  T
Q  169 ttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    | |||||| |||||||||||||   || || |||||||||||||||||||||||| |||||| |||||||||    
T  19151368 taaagttgatgtttattaaataatattttattctatttaagaaattttgaaaagtagtgtgaaatgcccgtt 19151297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 240
Target Start/End: Complemental strand, 20750865 - 20750696
Alignment:
Q  70 gcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaa-tatcccgctgcaaagtctcgatgaaaccgt 168  Q
    |||||||||||| |||||||  |||||||||||| | ||| | ||||| |||||||||  | | ||||| ||| |||||||||||| | |  |||||       
T  20750865 gcttttatgccaggattattatttggagaattaa-acgtttgatgttgatgttatttat-tatcgaaaaatattccgctgcaaagttttggcgaaactaa 20750768  T
Q  169 ttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    | |||||| |||||||||||||   || || |||||||||||||||||||||||| |||||| |||||||||    
T  20750767 taaagttgatgtttattaaataatattttattctatttaagaaattttgaaaagtagtgtgaaatgcccgtt 20750696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 10308653 - 10308739
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||| |||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  10308653 tttattagatagattttatattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 10308739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 14146014 - 14145956
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||  ||||||||||||    
T  14146014 tgtttattaaatagttttatattctatttatgaaattttgaaaagaagtgtgacatgcc 14145956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 16952963 - 16953025
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||||||||||||||| ||| |||||||||||||||||||||| || ||||||||||||||||    
T  16952963 tttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 16953025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 32770886 - 32770784
Alignment:
Q  158 gatgaaaccgtttaagttgttgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactctta 255  Q
    |||||||| |||||||||  |||||||||||||| ||| ||| ||||||||||||   ||||||| || |||||||||||||||||||||  |||||| |    
T  32770886 gatgaaactgtttaagttaatgtttattaaatagtttttatattctatttaagaatgcttgaaaatgtagtgtgacatgcccgtttgggatttactctga 32770787  T
Q  256 tgt 258  Q
    |||    
T  32770786 tgt 32770784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 45184969 - 45184911
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||  |||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  45184969 attaaataattttatattctatttaagaaattttgaaaagtagtgtgacatgaccgttt 45184911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 11308467 - 11308410
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||  || || |||||||||||||||||||||||| ||||||||||||||||    
T  11308467 attaaatagtattttattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 11308410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 11311775 - 11311718
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||  || || |||||||||||||||||||||||| ||||||||||||||||    
T  11311775 attaaatagtattttattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 11311718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 12684689 - 12684746
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||  || || |||||||||||||||||||||||| ||||||||||||||||    
T  12684689 attaaatagtattttattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 12684746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 13018989 - 13018925
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  13018989 gtttattaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 13018925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 13019161 - 13019097
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  13019161 gtttattaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 13019097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 13025696 - 13025632
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  13025696 gtttattaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 13025632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 14431526 - 14431470
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatg 234  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||  ||||||||||    
T  14431526 tgtttattaaatagttttatattctatttatgaaattttgaaaagaagtgtgacatg 14431470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 15141702 - 15141638
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||  |||||||||| ||||||    
T  15141702 tgtttattaaatagtttttatattctatttaagaaattttgaaaagcagtgtgacatgtccgttt 15141638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 15811650 - 15811603
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  15811650 ttgatgaggcttttatgccaagatt-tctattggagaattaatatgttg 15811603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 16188427 - 16188499
Alignment:
Q  193 tttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| ||||||||||||| ||||||| ||| |||||||||| ||||||||||  |||||| ||||||||||    
T  16188427 tttatattctatttaagaaaatttgaaatagtagtgtgacatgtccgtttgggatttactctgatgtatgttt 16188499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 19438778 - 19438710
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||| ||||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  19438778 tgttggttattaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 19438710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 19438866 - 19438819
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  19438866 ttgatgaggcttttatgccaagatt-tctattggagaattaatatgttg 19438819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 21232689 - 21232773
Alignment:
Q  182 tattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||| ||| |||||||| ||||||||||| | || |||||||||||||||||||||  |||||| ||| ||||||    
T  21232689 tattaaatagattttatattctatttacgaaattttgaatatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 21232773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 3290449 - 3290516
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccg-tttgggacatactcttatgt 258  Q
    |||||| |||||||||||||||||||||| || |||||||||||||| ||||||| ||||||| ||||    
T  3290449 tttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgttttgggatatactctgatgt 3290516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 15454945 - 15454899
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgtt 109  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  15454945 ttgatgaggcttttatgccaagatt-tctattggagaattaatatgtt 15454899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 13677793 - 13677731
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| ||||||||||||||||| |||  | | ||||||||||||||    
T  13677793 tgtttattaaatagttttatattctatttaagaaattttaaaatttagcgtgacatgcccgtt 13677731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 16669243 - 16669305
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||| |||||||| || || ||||||||| |||||||||||||  ||||||||||||||||||    
T  16669243 tttaataaatagaattttattctatttaaaaaattttgaaaagcagtgtgacatgcccgtttg 16669305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 16928633 - 16928675
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  16928633 tgtttattaaatagttttatattctatttaagaaattttgaaa 16928675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 16929724 - 16929766
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  16929724 tgtttattaaatagttttatattctatttaagaaattttgaaa 16929766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 17643611 - 17643673
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||| |||||||| || || ||||||||| |||||||||||||  ||||||||||||||||||    
T  17643611 tttaataaatagaattttattctatttaaaaaattttgaaaagcagtgtgacatgcccgtttg 17643673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 45185116 - 45185030
Alignment:
Q  18 tttggaacatgttgatatagccctttatttggttgttgaagta-attgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||| |||| |||||||||||||| |||||||| ||  ||||||||| || ||| ||| ||||||||| ||||| |||||    
T  45185116 tttggaacatgctgatgtagccctttatttgattgttgaattattttgatgaggtttctataccaggattatttagtggagtattaa 45185030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 13677897 - 13677856
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  13677897 ttgatgaggcttttatgccaagattattttatggagaattaa 13677856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 14946471 - 14946540
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttggga 245  Q
    |||| ||||||||||||| ||| ||||||| ||||||||||||  ||| |||||||||||||||||||||    
T  14946471 tgttgattaaatagattttatattctatttgagaaattttgaattagtagtgtgacatgcccgtttggga 14946540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 15374064 - 15374133
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttggga 245  Q
    |||| ||||||||||||| ||| ||||||| ||||||||||||  ||| |||||||||||||||||||||    
T  15374064 tgttgattaaatagattttatattctatttgagaaattttgaattagtagtgtgacatgcccgtttggga 15374133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 4279401 - 4279317
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  4279401 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 4279317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 6411343 - 6411283
Alignment:
Q  183 attaaatagattt-ataatctatttaagaaattttgaaa-agtggtgtgacatgcccgttt 241  Q
    ||||||||||||| ||| |||||||||||||||||||||  || |||||||||||||||||    
T  6411343 attaaatagattttatattctatttaagaaattttgaaattgtagtgtgacatgcccgttt 6411283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 15454857 - 15454789
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||| ||||||||||| |||||  ||||||||||||||||||||| || ||||  |||||| ||||||    
T  15454857 tgttggttattaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcctgtttgg 15454789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 16946361 - 16946425
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||| || |||| |||||||||||    
T  16946361 tgtttactaaatagattttatattctatttaagaaattttgaaaatgtagtgtaacatgcccgtt 16946425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 19615733 - 19615649
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  19615733 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 19615649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 36306765 - 36306848
Alignment:
Q  183 attaaatagattt--ataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||  ||| ||||||||||||||||  |   || |||||||||||||||||||||  |||||| ||||||||||    
T  36306765 attaaatagatttttatattctatttaagaaatttaaagttgtagtgtgacatgcccgtttgggaattactctgatgtatgttt 36306848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 11220655 - 11220698
Alignment:
Q  68 aggcttttatgccaagatt-atttattggagaattaatatgttg 110  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  11220655 aggcttttatgccaagatttaattattggagaattaatatgttg 11220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 17065102 - 17065063
Alignment:
Q  203 atttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  17065102 atttaagaaattttgaaaagcagtgtgacatgcccgtttg 17065063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 23441732 - 23441673
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgt 239  Q
    |||| ||||||| |||||| ||||||||| || ||||||||||  |||||||||||||||    
T  23441732 tttaataaatagttttatattctatttaaaaatttttgaaaagcagtgtgacatgcccgt 23441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 26295455 - 26295520
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtt 240  Q
    |||||| |||||||||||  ||| ||||||| ||||||||||||| ||| ||||||||||||||||    
T  26295455 tgtttaataaatagatttttatattctattttagaaattttgaaatagtagtgtgacatgcccgtt 26295520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 11384389 - 11384437
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaa-ttaatatgttg 110  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  11384389 ttgatgaggcttttatgccaagaat-tttattggagaatttaatatgttg 11384437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 11395665 - 11395713
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaa-ttaatatgttg 110  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  11395665 ttgatgaggcttttatgccaagaat-tttattggagaatttaatatgttg 11395713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 18959159 - 18959227
Alignment:
Q  177 ttgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    ||||||| ||||||| ||| ||| |||||||||| ||||||||||| || ||||||||||||||||||||    
T  18959159 ttgtttaataaatagtttttatattctatttaag-aattttgaaaatgtagtgtgacatgcccgtttggg 18959227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 46349269 - 46349343
Alignment:
Q  30 tgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaaga-ttatttattggagaattaa 103  Q
    |||| |||||||||||| |||||||||| | ||  |||||||||||||||||||||| ||||||| |||||||||||    
T  46349269 tgatgtagccctttatt-ggttgttgaatttatgttgatgaggcttttatgccaagatttattta-tggagaattaa 46349343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 4988386 - 4988298
Alignment:
Q  179 gtttattaaataga-tttataatctatttaag-aaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |  ||| ||||||||||||||| |  |||||| ||| ||||||    
T  4988386 gtttattaaatagattttatattctatttaagaaaattttgaaaatgaagtgggacatgcccgtttggaaattactctgatgcatgttt 4988298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 4992484 - 4992396
Alignment:
Q  179 gtttattaaataga-tttataatctatttaag-aaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |  ||| ||||||||||||||| |  |||||| ||| ||||||    
T  4992484 gtttattaaatagattttatattctatttaagaaaattttgaaaatgaagtgggacatgcccgtttggaaattactctgatgcatgttt 4992396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 12460966 - 12460906
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  ||||||| |||||    
T  12460966 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccatttgg 12460906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 13019079 - 13019036
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||    
T  13019079 tgaggcttttatgccaagatt-tctattggagaattattatgttg 13019036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 13019251 - 13019208
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||    
T  13019251 tgaggcttttatgccaagatt-tctattggagaattattatgttg 13019208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 13025786 - 13025743
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||    
T  13025786 tgaggcttttatgccaagatt-tctattggagaattattatgttg 13025743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 15811562 - 15811494
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||| ||||||||||  |||||  ||||||||||||||||||||| ||  |||  |||||||||||||    
T  15811562 tgttggttattaaatatttttattttctatttaagaaattttgaaatgtattgtagcatgcccgtttgg 15811494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 17469009 - 17469069
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||| ||||| || ||||  |||||||||||||    
T  17469009 attaaatagttttattttctatttaagaaattctgaaatgtagtgtagcatgcccgtttgg 17469069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 17584205 - 17584145
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||| ||||| || ||||  |||||||||||||    
T  17584205 attaaatagttttattttctatttaagaaattctgaaatgtagtgtagcatgcccgtttgg 17584145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 41783806 - 41783866
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||   || || |||||||||||||||| ||||||  ||||||||||||||||    
T  41783806 tttattaaataatattttattctatttaagaaatttcgaaaagcagtgtgacatgcccgtt 41783866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 62 - 260
Target Start/End: Complemental strand, 12148353 - 12148161
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||| |||||| |||||||| || |  || | |||||||||| |||||    ||||||||| |||||||||||| | ||||    
T  12148353 ttgatgaggcttttatgccaagactatttagtggagaatcaa-acatttgatgttgttgtt-tttaa----tgaaaatattccgctgcaaagttttgatg 12148260  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  12148259 aaactgtttatgttgttgtttattaaatagttttataatctatttaagaaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 12148161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 62 - 260
Target Start/End: Complemental strand, 12152479 - 12152287
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||| |||||| |||||||| || |  || | |||||||||| |||||    ||||||||| |||||||||||| | ||||    
T  12152479 ttgatgaggcttttatgccaagactatttagtggagaatcaa-acatttgatgttgttgtt-tttaa----tgaaaatattccgctgcaaagttttgatg 12152386  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  12152385 aaactgtttatgttgttgtttattaaatagttttataatctatttaagaaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 12152287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 62 - 253
Target Start/End: Original strand, 15935556 - 15935749
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttgg---ttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcg 158  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||||||   ||||||||||||||||| |||||||||||| ||||||||| || | |    
T  15935556 ttgatgaggcttttatgccaggattatttagtggagaattaa-atgttggatgttgttgttgttatttaa-tgttgaaaatattccgctgcaaggttttg 15935653  T
Q  159 atgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactct 253  Q
     ||||||  || ||||| |||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| || |||||||    
T  15935654 gtgaaactattaaagtttgttgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgagatatactct 15935749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 18136863 - 18137045
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||| |||||||||| ||||||||||| |||||||||||| | ||||    
T  18136863 ttgatgaggcttttatgccaagattatttgttggagattaaatatgttggatgttgtcgttatttaaa-gttgaaaatattccgctgcaaagttttgatg 18136961  T
Q  162 aaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgg 243  Q
    |||   || ||||| |||||||||||||| | |||||| |||||||||||||||||||||  || |||||| ||||||||||||    
T  18136962 aaatgattaaagttggttgtttattaaattgttttatattctatttaagaaattttgaaagtgtagtgtgatatgcccgtttgg 18137045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 18130367 - 18130549
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||||| |||||| |||||||||| ||||||||||| |||||||||||| | |||     
T  18130367 ttgatgaggcttttatgccaagattatttatcggagattaaatatgttggatgttgtcgttatttaaa-gttgaaaatattccgctgcaaagttttgata 18130465  T
Q  162 aaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgg 243  Q
    |||   || ||||| |||||||||||||||| |||||| | |||||||||||||||||||  || |||||||||||||| ||||    
T  18130466 aaatgattaaagttggttgtttattaaatagttttatattttatttaagaaattttgaaattgtagtgtgacatgcccgattgg 18130549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 264
Target Start/End: Original strand, 12961946 - 12962138
Alignment:
Q  68 aggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| || | | ||||       
T  12961946 aggcttttatgccaagatttaattattggagaattaatatgttggatgttgatgttatttaaatgttgaaaatattccgctgcaaggttttggtgaa--- 12962042  T
Q  167 gtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
        ||||| ||| |||||||||||| ||||||  ||||||| |||||||||||  ||| ||||||||| |||||||||||  |||||| ||| ||||||    
T  12962043 ----aagttggttatttattaaatagttttatatactatttacgaaattttgaattagtagtgtgacatacccgtttgggaattactctgatgcatgttt 12962138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 11888825 - 11888745
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  11888825 tgtttattaaatagttttataatctatttaagaaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgt 11888745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 119 - 253
Target Start/End: Original strand, 15937465 - 15937599
Alignment:
Q  119 tgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttg 217  Q
    |||||||||| |||||||||||| ||||||||| || | | ||||||  || ||||| ||||| |||||||||| |||||| ||||||||||||||||||    
T  15937465 tgttatttaa-tgttgaaaatattccgctgcaaggttttggtgaaactattaaagtttgttgtatattaaatagttttatattctatttaagaaattttg 15937563  T
Q  218 aaaagtggtgtgacatgcccgtttgggacatactct 253  Q
    |||||| |||||||||||||||||| || |||||||    
T  15937564 aaaagtagtgtgacatgcccgtttgagatatactct 15937599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 31691204 - 31691385
Alignment:
Q  66 tgaggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttga-aaatatcccgctgcaaagtctcgatgaa 163  Q
    ||||||||| |||||| |||| |  |||||||||||||||||||||| || || ||||||||||||  ||| |||||| |||||||||  | | ||||||    
T  31691204 tgaggctttcatgccacgatttaactattggagaattaatatgttggatgatgctgttatttaaat--tgataaatattccgctgcaagattttgatgaa 31691301  T
Q  164 accgtttaagttg-ttgtttattaaatagatttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttggga 245  Q
    ||  || |||||| ||||||||||||||| ||||||  ||||||||||||||||||||  || |||||||||||||||||||||    
T  31691302 acaattaaagttggttgtttattaaatagttttatatgctatttaagaaattttgaaagtgtagtgtgacatgcccgtttggga 31691385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 12202001 - 12201909
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaa--ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| |||||||||||||||| ||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||  |||||||||||    
T  12202001 caatttttggaacatgttgatgtagccctttatttggttgttgaatttattttgatgaggcttttatgccaagattattttatggagaattaa 12201909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 66 - 245
Target Start/End: Complemental strand, 31943013 - 31942832
Alignment:
Q  66 tgaggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttga-aaatatcccgctgcaaagtctcgatgaa 163  Q
    ||||||||| |||||| |||| |  |||||||||||||||||||||| || || | ||||||||||  ||| |||||| |||||||||  | | ||||||    
T  31943013 tgaggctttcatgccacgatttaactattggagaattaatatgttggatgatgctattatttaaat--tgataaatattccgctgcaagattttgatgaa 31942916  T
Q  164 accgtttaagttg-ttgtttattaaatagatttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttggga 245  Q
    ||  || |||||| ||||||||||||||| ||||||  ||||||||||||||||||||  || |||||||||||||||||||||    
T  31942915 acgattaaagttggttgtttattaaatagttttatatgctatttaagaaattttgaaagtgtagtgtgacatgcccgtttggga 31942832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 245
Target Start/End: Complemental strand, 12254764 - 12254580
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttg-aaaatatcccgctgcaaagtctcgat 160  Q
    ||||||||  ||||||||||||| ||||| ||||||||| | |||||||| ||||||| ||| ||||  | || ||||||| ||||||||| || | |||    
T  12254764 ttgatgagatttttatgccaagactatttgttggagaataattatgttggatgttgttattaattaa--gctgaaaaatattccgctgcaaggttttgat 12254667  T
Q  161 gaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttggga 245  Q
    ||||   || ||||| |||||||||||||||| ||||||  |||||||||||||||||||  ||  |||||||||||||||||||||    
T  12254666 gaaatgattaaagttggttgtttattaaatagttttatatactatttaagaaattttgaattagaagtgtgacatgcccgtttggga 12254580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 13037598 - 13037663
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  13037598 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg 13037663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 13043963 - 13044028
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  13043963 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg 13044028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 16824416 - 16824502
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg-gacatactcttatgtat 260  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||   |||||||||||||||||| || ||||||| ||||||    
T  16824416 tgttgtttattaaatagttttatattctatttaagaaattttgaaaagcaatgtgacatgcccgtttggtgatatactctgatgtat 16824502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 54563647 - 54563590
Alignment:
Q  261 gtttctcatcttctgtttgcagacgactgctttctcttttttaaggcggaggaaaatc 318  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  54563647 gtttctcatcttctgtttgcagacgacaactttctcttttttaaggcggaggaaaatc 54563590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 2249689 - 2249777
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  2249689 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 2249777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 2270913 - 2271001
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  2270913 tgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 2271001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 15955531 - 15955667
Alignment:
Q  18 tttggaacatgttgatatagccctttat-ttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaatatgttg---gt 112  Q
    ||||||||||| |||| ||||||||| | ||| |||||||| || || ||||||||||||| |||| ||||||||| |||| |||||| ||||||   ||    
T  15955531 tttggaacatgctgatgtagccctttttgttgattgttgaattattttgatgaggcttttacgccaggattatttagtggataattaa-atgttggatgt 15955629  T
Q  113 tgttgttgttatttaaatgttgaaaatatcccgctgcaa 151  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  15955630 tgttgttgttattt-aatgttgaaaatattccgctgcaa 15955667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 12356521 - 12356592
Alignment:
Q  32 atatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||    
T  12356521 atatagctctttaattggttgttgaaataattgatgaggcttttatgccaagattactttatggagaattaa 12356592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 12363070 - 12363141
Alignment:
Q  32 atatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||    
T  12363070 atatagctctttaattggttgttgaaataattgatgaggcttttatgccaagattactttatggagaattaa 12363141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 24285125 - 24285187
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||    
T  24285125 tgtttattaaatagttttatattctatttaagaaattttgaaaagcagtgtgacatgcccgtt 24285187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 11306271 - 11306516
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||| |||||||| ||| ||| ||||||||||||||||||||||| | ||  |||||| |||||||||||||||||||||  |||||||||||   ||||    
T  11306271 caatttttggaacttgtggatgtagccctttatttggttgttgaatttatcttgatgacgcttttatgccaagattattttatggagaattaaatagttg 11306370  T
Q  111 gttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgttta-ttaaatagattt-ataatctattta 207  Q
     ||||||||| | |||||    || |||||| |||||||||| | |   ||||   ||||| |   | |||||| |||||||| ||| ||||||||||||    
T  11306371 -ttgttgttgct-tttaa----tgcaaatattccgctgcaaattgt---tgaa---gtttatgaaagatgtttaattaaatagtttttataatctattta 11306458  T
Q  208 agaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||| |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  11306459 agaaaatttgaaaaagtagtgtgacatgcccgtttgggatttactctgatgtatgttt 11306516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 12201845 - 12201780
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||  |||||||||||||||||||    
T  12201845 tgtttattaaatagttttatattctatttaagaaaatttgaaaagcagtgtgacatgcccgtttgg 12201780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 15518567 - 15518498
Alignment:
Q  176 gttgtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  15518567 gttgttcattaaatagttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggg 15518498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 17495629 - 17495568
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactct 253  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||    
T  17495629 tttataatctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatatactct 17495568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 40599 - 40511
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  40599 tgtttattaaatagattttatattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 40511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 244
Target Start/End: Original strand, 13314487 - 13314661
Alignment:
Q  72 ttttatgccaagat-tatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgttt 170  Q
    |||||||||||||  ||||||||||| | | |||||||||| || |||||||| || || |||||  |||| ||||||||| || | |||||||    |     
T  13314487 ttttatgccaagaaatatttattggatattaaatatgttggatgatgttgttaattgaa-gttgatcatattccgctgcaaggttttgatgaaatgaata 13314585  T
Q  171 aagttgttg-tttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    || ||| || |||||||||||| |||||| ||||||||||||||||| |||| || ||||||||||||||||||||    
T  13314586 aaattggtggtttattaaatagttttatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttggg 13314661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 244
Target Start/End: Original strand, 13325402 - 13325576
Alignment:
Q  72 ttttatgccaagat-tatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgttt 170  Q
    |||||||||||||  ||||||||||| ||| |||||||||| || |||||||| || || |||||  |||| ||||||||| || | |||||||    |     
T  13325402 ttttatgccaagaaatatttattggataataaatatgttggatgatgttgttaattgaa-gttgatcatattccgctgcaaggttttgatgaaatgaata 13325500  T
Q  171 aagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    || || || ||||||||||||  |||||| ||||||||||||||||| |||| || ||||||||||||||||||||    
T  13325501 aaattcgtggtttattaaatatttttatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttggg 13325576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 13303919 - 13303985
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    ||||||||||||| |||||| ||||||||||||||||| |||| || ||||||||||||||||||||    
T  13303919 gtttattaaatagttttatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttggg 13303985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 14648924 - 14649010
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  14648924 tttattaaatagattttatattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 14649010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 18719759 - 18719841
Alignment:
Q  184 ttaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||| ||| |||||||||||||||||||||| || ||||||||||||||||||| |  |||||| ||||||||||    
T  18719759 ttaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggtaattactctgatgtatgttt 18719841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 12273735 - 12273670
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||  |||||||||||| ||||||    
T  12273735 tgtttattaaatagttttatattctatttaagaatttttgaaaagcagtgtgacatgccagtttgg 12273670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 12469408 - 12469500
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| |||||||  ||| ||| ||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||   ||||||||||    
T  12469408 caatttttggaatttgtggatgtagccctttatttggttgttgaatttatcttgatgaggcttttatgccaagattatttgaaggagaattaa 12469500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 45221436 - 45221521
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  45221436 ttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 45221521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 17244347 - 17244413
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtg--gtgtgacatgcccgtttggg 244  Q
    |||||||||||| |||||| ||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  17244347 tttattaaatagttttatattctatttaagaaaatttgaaaaatgaagtgtgacatgcccgtttggg 17244413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 16383515 - 16383572
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| ||||||||||||    
T  16383515 tgtttattaaatag-tttatattctatttatgaaattttgaaaagttgtgtgacatgcc 16383572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 5840771 - 5840686
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| || ||||||||||||||||||| |  |||||| ||| ||||||    
T  5840771 ttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttggaaattactctgatgcatgttt 5840686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 12356674 - 12356726
Alignment:
Q  193 tttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||| ||||||||||||| ||||||| || |||||||||||||||||||||    
T  12356674 tttatattctatttaagaaaatttgaaatgtagtgtgacatgcccgtttggga 12356726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 32388629 - 32388676
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  32388629 ttgatgaggcttttatgccaagatt-tctattggagaattaatatgttg 32388676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 54900764 - 54900828
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||| || ||||||||||||||||    
T  54900764 tgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 54900828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 54972305 - 54972233
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| |||||||||||||||||||||| |  |||||||||||||||||||||  |||||| ||| ||||||    
T  54972305 tttatattctatttaagaaattttgaaaatgaagtgtgacatgcccgtttgggaattactctgatgcatgttt 54972233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 54974915 - 54974843
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| |||||||||||||||||||||| |  |||||||||||||||||||||  |||||| ||| ||||||    
T  54974915 tttatattctatttaagaaattttgaaaatgaagtgtgacatgcccgtttgggaattactctgatgcatgttt 54974843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 54977525 - 54977453
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||| |||||||||||||||||||||| |  |||||||||||||||||||||  |||||| ||| ||||||    
T  54977525 tttatattctatttaagaaattttgaaaatgaagtgtgacatgcccgtttgggaattactctgatgcatgttt 54977453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 13341288 - 13341224
Alignment:
Q  178 tgtttattaaatag-atttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||  |||||||||||| |||||    
T  13341288 tgtttattaaatagtatttatt-tctatttaagaaattttgaaaagcagtgtgacatgcctgtttg 13341224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 46724115 - 46724172
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||  || || |||||||||||||||||||||||| ||||||||| ||||||    
T  46724115 attaaatagtattttattctatttaagaaattttgaaaagtagtgtgacatacccgtt 46724172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 8584033 - 8584117
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  8584033 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 8584117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 11965573 - 11965637
Alignment:
Q  201 ctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||||| |  ||| |||||||||||||||||||||  |||||| ||||||||||    
T  11965573 ctatttaagaaattttggattagtagtgtgacatgcccgtttgggatttactctgatgtatgttt 11965637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 13969540 - 13969624
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  13969540 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 13969624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 13975019 - 13975103
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  13975019 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 13975103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 14012838 - 14012922
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  14012838 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 14012922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 14089370 - 14089286
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  14089370 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 14089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 14569308 - 14569252
Alignment:
Q  183 attaaatagatttataatctatttaagaaatttt-gaaaagtggtgtgacatgcccg 238  Q
    ||||||||| |||||| |||||||||||| |||| ||||||| ||||||||||||||    
T  14569308 attaaatagttttatattctatttaagaacttttggaaaagtagtgtgacatgcccg 14569252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 14952561 - 14952609
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgt 228  Q
    |||||||||||| ||||||  |||||||||||||||||||||| |||||    
T  14952561 tttattaaatagttttatatcctatttaagaaattttgaaaagcggtgt 14952609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 16798792 - 16798752
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  16798792 tttattaaatagttttatattctatttaagaaattttgaaa 16798752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 17210553 - 17210497
Alignment:
Q  178 tgtttattaaatagatttataatctatttaag-aaattttgaaaagtggtgtgacat 233  Q
    |||| ||||||||| |||||| |||||||||| |||||||||||||| |||||||||    
T  17210553 tgttcattaaatagttttatattctatttaagaaaattttgaaaagtagtgtgacat 17210497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 18957273 - 18957207
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttgaaa--agtggtgtgacatgcccgtt 240  Q
    |||||| |||||||||||  ||| |||||||||||||||||||||  ||| ||||||||||||||||    
T  18957273 tgtttaataaatagatttttatattctatttaagaaattttgaaaagagtagtgtgacatgcccgtt 18957207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 24123990 - 24124054
Alignment:
Q  178 tgtttattaaatagatttataatctatttaag-aaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||| ||| |||||||| || ||||||||||||||||    
T  24123990 tgtttattaaatagttttatattctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtt 24124054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 30597474 - 30597521
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||    
T  30597474 ttgaagaggcttttatgccaagatt-tctattggagaattaatatgttg 30597521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 49398910 - 49398826
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  49398910 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 49398826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 55293406 - 55293446
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  55293406 tttattaaatagttttatattctatttaagaaattttgaaa 55293446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 8374583 - 8374657
Alignment:
Q  35 tagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||||||||| ||| |||||| | | | || ||||||||||||||||||||| | ||||||||||||| |||||||    
T  8374583 tagccctttagttgattgttggatttaatgttgaggcttttatgccaagatt-tctattggagaattattatgttg 8374657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 264
Target Start/End: Original strand, 14544827 - 14544955
Alignment:
Q  137 aatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatag-atttataatctatttaagaaattttga--aaagtggtgtgacat 233  Q
    ||||| |||||||||||| | |||||||| ||||  |||| ||||||||||||||  |||||| |||||||||||||  ||||   | || |||||||||    
T  14544827 aatattccgctgcaaagttt-gatgaaactgttttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacat 14544924  T
Q  234 gcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||  |||||| ||| ||||||    
T  14544925 gcccgtttgggaattactctgatgcatgttt 14544955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 15012734 - 15012777
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||||||||||||  ||||||||| |||||||||    
T  15012734 tctatttaagaaattttgaaaagcagtgtgacattcccgtttgg 15012777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 14292225 - 14292160
Alignment:
Q  183 attaaatagattt--ataatctatttaagaaa-ttttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||||||||||  ||| ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  14292225 attaaatagatttttatattctatttaagaaaattttgaaaatgtagtgtgacatgcccgtttggg 14292160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 18957934 - 18957892
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaag 222  Q
    |||||||||||| |||||| ||||||||||||||||| |||||    
T  18957934 tttattaaatagttttatattctatttaagaaattttaaaaag 18957892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 16830678 - 16830727
Alignment:
Q  195 tataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttggg 244  Q
    |||| ||||||||||||||||  ||  |||||||||||||||||||||||    
T  16830678 tatattctatttaagaaatttgaaattgtggtgtgacatgcccgtttggg 16830727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 32388717 - 32388762
Alignment:
Q  175 tgttgtttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    ||||| ||||||||||| |||||  |||||||||||||||||||||    
T  32388717 tgttggttattaaatagttttattttctatttaagaaattttgaaa 32388762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 54518856 - 54518799
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||  ||||||||||||||||||||| |  |||| |||||||||||    
T  54518856 attaaatagttttattttctatttaagaaattttgaaatgacgtgtaacatgcccgtt 54518799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 18757705 - 18757756
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||| |||||||||| ||||||||||| || ||||||||||||||||||||    
T  18757705 tttatattctatttaag-aattttgaaaatgtagtgtgacatgcccgtttggg 18757756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 30597567 - 30597631
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||| |||||  |||||||||||| ||||| || || ||||  |||||||||||||    
T  30597567 gtttattaaatagttttattttctatttaagaatttttggaatgtagtgtagcatgcccgtttgg 30597631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 39229896 - 39229849
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgt 228  Q
    |||||||||||| ||||||  |||||||||||||||||||||| |||||    
T  39229896 tttattaaatag-tttatatcctatttaagaaattttgaaaagcggtgt 39229849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 49162664 - 49162597
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttga-aaagtggtgtgacatgcccgtttg 242  Q
    |||||| |||||||||||  ||| ||||||||||||||||||| | ||| ||||||||||||| ||||    
T  49162664 tgtttaataaatagatttttatattctatttaagaaattttgatatagtagtgtgacatgcccatttg 49162597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 50795 - 50558
Alignment:
Q  18 tttggaacatgttgatatagccctt-tatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaatatgttggttgt 115  Q
    ||||||||||| |||| |||||||| |||||| |||| ||  || || |||||| ||||||||||||||||||||||||||||||||||||||| | |||    
T  50795 tttggaacatgctgatgtagcccttgtatttgattgtggatttattttgatgagacttttatgccaagattatttattggagaattaatatgttagatgt 50696  T
Q  116 tgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttg-tttattaaatagatttataatctatttaagaaatt 214  Q
    ||||||||||| |||||||||||||| ||||||||| || | | ||||| |  ||||||||||| |||||||||||| |||||| |||||||||||||||    
T  50695 tgttgttattt-aatgttgaaaatattccgctgcaaggttttggtgaaa-ctattaagttgttgttttattaaatagttttatattctatttaagaaatt 50598  T
Q  215 ttgaaaagtggtgtgacatgcccg-tttgggacatactct 253  Q
    ||| ||||| | |||||||||||| ||||||| |||||||    
T  50597 ttgtaaagtagcgtgacatgcccgttttgggatatactct 50558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 8151 - 7898
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaatt--gatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||| |||||||||||||||| ||||||||||||||||||||| | | |||  ||| | |||||||||||||||||||||||| ||| ||||||||||||    
T  8151 caatttttggaacatgttgatgtagccctttatttggttgttggatttattttgataatgcttttatgccaagattatttattagaggattaatatgttg 8052  T
Q  111 gttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttg-tttattaaatagatttataatctatttaag 209  Q
    | |||||| ||||||| |||||||||||||| ||||| ||| || | | ||||| |   |||||||||| |||||||||||| |||||| ||||||||||    
T  8051 gatgttgtggttattt-aatgttgaaaatattccgctacaaggttttggtgaaa-ctaataagttgttgttttattaaatagttttatattctatttaag 7954  T
Q  210 aaattttgaaaagtggtgtgacatgcccg-tttgggacatactcttatgtatgttt 264  Q
    |||  ||||||| | ||||||| |||||| ||||||| ||||||| ||||||||||    
T  7953 aaaaattgaaaactagtgtgacgtgcccgttttgggatatactctgatgtatgttt 7898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 5460 - 5691
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaatt--gatgaggcttttatgccaagattatttattggagaattaatatgttg 110  Q
    |||| |||||||||||||||| ||||||||||||||||||||| | | |||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  5460 caatttttggaacatgttgatgtagccctttatttggttgttggatttattttgatgaggcttttatgccaagattatttaatggagaattaatatgttg 5559  T
Q  111 gttg-ttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttg-tttattaaatagatttataatcta-ttta 207  Q
    | || |||| |||| || |||||||||| ||| ||||||||| || | | ||||| |  ||||||||||| |||||||||||| |||||| |||| ||||    
T  5560 gatgtttgtggttaatt-aatgttgaaactattccgctgcaaggttttggtgaaa-ctattaagttgttgttttattaaatagttttatattctatttta 5657  T
Q  208 agaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||  ||||| |||||||||||||||||    
T  5658 agaaattttataaagtagtgtgacatgcccgttt 5691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 10573 - 10486
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagta-attgatgaggcttttatgccaagattatttattggagaa 99  Q
    |||| ||||||||||| ||||  |||||||||||||||||||||| ||  |||||||||||||||||||| |||| |||| |||||||    
T  10573 caatttttggaacatgatgatgaagccctttatttggttgttgaattattttgatgaggcttttatgccaggattgtttagtggagaa 10486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 10426 - 10366
Alignment:
Q  181 ttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||| |||||||||||| ||||    
T  10426 ttattaaatagttttataatctatttatgaaattttgtaaagtagtgtgacatgcctgttt 10366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 7e-46; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 13 - 260
Target Start/End: Original strand, 21686617 - 21686863
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggt 112  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||| |  |||||||||||||||||||||||||||||  |||||||||||   |||| |    
T  21686617 caatttttggaacatgctgatgtagccctttatttggttgttgaattgtttgatgaggcttttatgccaagattattttatggagaattaaacagttgat 21686716  T
Q  113 tgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaag-ttgttgtttattaaatagatttataatctatttaagaa 211  Q
      |||||||| |||   |  ||||||||| |||||||||  | | | ||||||  || ||| |||||||||||||||||| ||||||  |||||||||||    
T  21686717 gtttgttgttgttt--ttaatgaaaatattccgctgcaagattttggtgaaactattaaagtttgttgtttattaaatagttttatatcctatttaagaa 21686814  T
Q  212 attttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||||||| |||||||||| |||||||||| ||||||| ||||||    
T  21686815 attttgaaaagtagtgtgacatggccgtttgggatatactctgatgtat 21686863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 13 - 260
Target Start/End: Original strand, 21690941 - 21691187
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggt 112  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||| |  |||||||||||||||||||||||||||||  |||||||||||   |||| |    
T  21690941 caatttttggaacatgctgatgtagccctttatttggttgttgaattgtttgatgaggcttttatgccaagattattttatggagaattaaacagttgat 21691040  T
Q  113 tgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaag-ttgttgtttattaaatagatttataatctatttaagaa 211  Q
      |||||||| |||   |  ||||||||| |||||||||  | | | ||||||  || ||| |||||||||||||||||| ||||||  |||||||||||    
T  21691041 gtttgttgttgttt--ttaatgaaaatattccgctgcaagattttggtgaaactattaaagtttgttgtttattaaatagttttatatcctatttaagaa 21691138  T
Q  212 attttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||||||| |||||||||| |||||||||| ||||||| ||||||    
T  21691139 attttgaaaagtagtgtgacatggccgtttgggatatactctgatgtat 21691187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 62 - 244
Target Start/End: Original strand, 19988737 - 19988922
Alignment:
Q  62 ttgatgaggcttttatgccaaga-ttatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgat 160  Q
    ||||||||||||||||||||||| |||||||||||||| | | |||||||| |||||||||||| |||| ||||||||||| |||||||||||| | ||     
T  19988737 ttgatgaggcttttatgccaagaattatttattggagattaattatgttggatgttgttgttatgtaaa-gttgaaaatattccgctgcaaagttttgaa 19988835  T
Q  161 gaaaccgtttaagttg-ttgtttattaaatagatttataatctatttaagaaattt-tgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    ||||   || |||||| ||||||||||||| | |||||| |||||||||||||||| |||||| || ||||||||||||||||||||    
T  19988836 gaaatgattaaagttggttgtttattaaattgttttatattctatttaagaaatttgtgaaaatgtagtgtgacatgcccgtttggg 19988922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 68 - 261
Target Start/End: Complemental strand, 22385690 - 22385497
Alignment:
Q  68 aggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||| |||||  |||||||||||||||||||||| | ||||||| || | | ||||| |    
T  22385690 aggcttttacgccaagatttaattattggagaattaatatgttggatgttgacgttatttaaatgttgaaaatattctgctgcaaggttttggtgaaa-c 22385592  T
Q  167 gtttaagttgtt-gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatg 261  Q
      ||||||| ||  || ||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||| ||| ||||| | |||||||    
T  22385591 tattaagttattaattcattaaatagttttataatctatttaagaaattttgaaaagt-atgtgacatgcccgttttggaaatactgtgatgtatg 22385497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 261
Target Start/End: Original strand, 41010003 - 41010199
Alignment:
Q  68 aggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    ||||||||||||||||||| | ||||| ||||||||||| ||||| ||||| |||||||||||||||||||| || ||||||||| || |  ||||||      
T  41010003 aggcttttatgccaagatttaattattcgagaattaatacgttggatgttgatgttatttaaatgttgaaaacattccgctgcaaggttttaatgaaatg 41010102  T
Q  167 gtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgtatg 261  Q
     || ||||| |||||||||||||||| ||||||  |||||||||||||||||||  ||  ||||| ||||||||||| ||| ||||||| |||||||    
T  41010103 attaaagttggttgtttattaaatagttttatatactatttaagaaattttgaattagaagtgtggcatgcccgttttggaaatactctgatgtatg 41010199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 25625320 - 25625496
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    |||||||||||||||||||| ||||||||||||||||||||| |  ||| | |||| |||||| |||   |  ||||||| ||||||||| || | | ||    
T  25625320 ttgatgaggcttttatgccaggattatttattggagaattaa-acattgat-gttgatgttatctaa---tgaaaaatattccgctgcaaggttttggtg 25625414  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||   | |||||| ||||||||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  25625415 aaactaataaagttgatgtttattaaatagtattatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg 25625496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 14595424 - 14595511
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  14595424 ttgttgtttattaaatagttttatattctatttaagaaaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 14595511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 22003316 - 22003401
Alignment:
Q  42 ttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||||||||||||||| ||||||||| |||||||||| ||||| | ||||||| |||||||||||||||| |||||| |||||||||    
T  22003316 ttatttggttgttgaattaattgatggggcttttatgtcaagact-tttattgaagaattaatatgttggatgttgtggttatttaa 22003401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 22989094 - 22989006
Alignment:
Q  175 tgttgtttattaaatagattt--ataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatg 261  Q
    ||||||| |||||||||||||  ||| |||||||||||||||||||||||| | ||||||||||||||| ||| ||||||| |||||||    
T  22989094 tgttgttcattaaatagatttttatattctatttaagaaattttgaaaagtagcgtgacatgcccgttttggaaatactctgatgtatg 22989006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 21322904 - 21322992
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  21322904 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 21322992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 19853001 - 19852938
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  19853001 tttattaagtagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg 19852938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 19859037 - 19858974
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  19859037 tttattaagtagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg 19858974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 20005858 - 20005800
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  20005858 attaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 20005800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 21968349 - 21968434
Alignment:
Q  42 ttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||||||||||||||| ||||||||  |||||||||| ||||| | ||||||| |||||||||||||||| |||||| |||||||||    
T  21968349 ttatttggttgttgaattaattgattgggcttttatgtcaagact-tttattgaagaattaatatgttggatgttgtggttatttaa 21968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 21981189 - 21981274
Alignment:
Q  42 ttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||||||||||||||| ||||||||| ||| |||||| ||||| | ||||||| |||||||||||||||| |||||| |||||||||    
T  21981189 ttatttggttgttgaattaattgatggggcatttatgtcaagact-tttattgaagaattaatatgttggatgttgtggttatttaa 21981274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 22011652 - 22011737
Alignment:
Q  42 ttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||||||||||||||| ||||||||| |||||||||| ||||| | ||||||| |||||||||||||||| | |||| |||||||||    
T  22011652 ttatttggttgttgaattaattgatggggcttttatgtcaagact-tttattgaagaattaatatgttggattttgtggttatttaa 22011737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 7302266 - 7302335
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  7302266 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 7302335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 21327492 - 21327561
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  21327492 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 21327561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 28852953 - 28852868
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  28852953 ttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 28852868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 243
Target Start/End: Complemental strand, 33087703 - 33087552
Alignment:
Q  91 attggagaattaatatgttggttgttgttgttatttaaatgttgaaaa-tatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaat 189  Q
    |||||||||||||| |||||| ||| | |||||||||  | ||||||| ||| || ||||||||| | | ||||||  || |||||| ||||||||||||    
T  33087703 attggagaattaat-tgttggatgtcgatgttatttat-tattgaaaaatattccactgcaaagttttggtgaaactattaaagttggtgtttattaaat 33087606  T
Q  190 agatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||  || || |||||||||||||||||||||||| || |||||| |||||||||    
T  33087605 agtattttattctatttaagaaattttgaaaagtagtatgacattcccgtttgg 33087552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 45136051 - 45136119
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  45136051 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 45136119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 22176546 - 22176628
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||||    
T  22176546 tgttcattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctaatgt 22176628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 6609365 - 6609434
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  6609365 tgtttgttaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 6609434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 21968486 - 21968551
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||||||||| |||||| ||||||||||||| |||  ||||| |||||||||||||||||||||    
T  21968486 tttattaaatagttttatattctatttaagaaaattttgaaagtagtgtgacatgcccgtttggga 21968551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 22011789 - 22011854
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||||||||| |||||| ||||||||||||| |||  ||||| |||||||||||||||||||||    
T  22011789 tttattaaatagttttatattctatttaagaaaattttgaaagtagtgtgacatgcccgtttggga 22011854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 44494696 - 44494765
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||| || |||||||||||||||||||||    
T  44494696 tgtttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttggga 44494765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 10606600 - 10606481
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagat-tattt-attggagaattaatatgt 108  Q
    |||| |||||||| || |||| |||||||||  |||||| ||||| | ||  |||| | |||||||||||||||| ||||| ||||||||||||||||||    
T  10606600 caatttttggaacttgatgatgtagccctttggttggttattgaatttatgttgataaagcttttatgccaagatgtattttattggagaattaatatgt 10606501  T
Q  109 tggttgttgttgttatttaa 128  Q
    ||| |||||| |||||||||    
T  10606500 tggatgttgtggttatttaa 10606481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 36601153 - 36601065
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||| || ||||||||||||||||||| |  |||||| ||| ||||||    
T  36601153 tgtttattaaatagattttatattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttggaaattactctgatgcatgttt 36601065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 44430904 - 44430817
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||||||  |||||| ||| ||||||    
T  44430904 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatg-ccgtttgggaattactctgatgcatgttt 44430817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 20784524 - 20784587
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||  |||||||||||||||||  ||||| |||||||||||||||||    
T  20784524 tgtttattaaatagttttatcttctatttaagaaattttataaagtagtgtgacatgcccgttt 20784587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 22248542 - 22248475
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||| ||| |||||||||||||| ||||||| || |||||||||||||||||||||    
T  22248542 tttattaaatagattttatattctatttaagaaatcttgaaaatgtagtgtgacatgcccgtttggga 22248475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 11252433 - 11252475
Alignment:
Q  47 tggttgttgaagtaattgatgaggcttttatgccaagattatt 89  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  11252433 tggttgttgaattaattgatgaggcttttatgccaagattatt 11252475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 21300837 - 21300895
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||    
T  21300837 attaaatagttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 21300895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 21981326 - 21981388
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||| |||||| ||||||||||||| |||  ||||| ||||||||||||||||||    
T  21981326 tttattaaatagttttatattctatttaagaaaattttgaaagtagtgtgacatgcccgtttg 21981388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 21986245 - 21986307
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||| |||||| ||||||||||||| |||  ||||| ||||||||||||||||||    
T  21986245 tttattaaatagttttatattctatttaagaaaattttgaaagtagtgtgacatgcccgtttg 21986307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 23653352 - 23653290
Alignment:
Q  182 tattaaatagatttataatctatttaagaaatt-ttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||| |||||| ||||||||||||| | ||||||||| |||||||||||||||||||    
T  23653352 tattaaatagttttatattctatttaagaaaatattgaaaagtagtgtgacatgcccgtttgg 23653290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 151
Target Start/End: Original strand, 14058144 - 14058228
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaa 151  Q
    |||||||||||||||| || ||||||||||||| |   ||| |||| ||||||||||| ||||| ||||||||||| |||||||||    
T  14058144 tgaggcttttatgccatgaatatttattggagattacttatattggatgttgttgttaattaaa-gttgaaaatattccgctgcaa 14058228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 20984511 - 20984576
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||||||||| || ||| ||||||||||||||||| |||| || ||||||||||||||||||||    
T  20984511 tttattaaatagtttcatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttggg 20984576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 21930233 - 21930192
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  21930233 ttgatgaggcttttatgccacgattatttattggagaattaa 21930192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 39362955 - 39362898
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||  || || |||||||||||||||||||||||| ||||||||||||||||    
T  39362955 attaaatagtattttattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 39362898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 11252547 - 11252630
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatg 261  Q
    |||||||||||||||||| ||| ||||||||| |  |||||||||||  |||||||||||||||| ||| ||||||| |||||||    
T  11252547 tgtttattaaatagattttatattctatttaaaattttttgaaaagta-tgtgacatgcccgttttggaaatactctgatgtatg 11252630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 11773761 - 11773673
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||| || ||||| |||| ||||||||||  |||||| ||| ||||||    
T  11773761 tgtttattaaatagattttatattctatttaagaaatcttgaaaatgtagtgtgtcatgtccgtttgggaattactctgatgcatgttt 11773673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 24708828 - 24708872
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaag 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  24708828 tgtttattaaatagttttatattctatttaagaaattttgaaaag 24708872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 21300697 - 21300754
Alignment:
Q  35 tagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattattt 90  Q
    ||||||||| ||||||||||||| | ||  ||||||||||||||||||||||||||||    
T  21300697 tagccctttttttggttgttgaatttatcttgatgaggcttttatgccaagattattt 21300754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 21668386 - 21668304
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||  ||| ||||||||||||| |||||||  |||||| ||||    
T  21668386 tgtttattaaataaattttatattctatttaagaaattttgaattagtagtgtgacatgcccatttgggatttactctgatgt 21668304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 25110371 - 25110309
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttggg 244  Q
    |||| |||| |||||| ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  25110371 attatatagttttatattctatttaagaaattttgaattagtagtgtgacatgcccgtttggg 25110309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 21839102 - 21839061
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  21839102 ttgatgaggcttttatgccagaattatttattggagaattaa 21839061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 27889360 - 27889307
Alignment:
Q  192 atttataatctatttaagaaattttga-aaagtggtgtgacatgcccgtttggg 244  Q
    ||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  27889360 atttatattctatttaagaaattttgatatagtagtgtgacatgcccgtttggg 27889307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 27948018 - 27947965
Alignment:
Q  192 atttataatctatttaagaaattttga-aaagtggtgtgacatgcccgtttggg 244  Q
    ||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  27948018 atttatattctatttaagaaattttgatatagtagtgtgacatgcccgtttggg 27947965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 21281508 - 21281425
Alignment:
Q  183 attaaatagattt--ataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||  ||| ||||||||||||||||  ||  |  |||||||||||||||||||||  |||||| ||||||||||    
T  21281508 attaaatagatttttatattctatttaagaaatttaaaattgaagtgtgacatgcccgtttgggaattactctgatgtatgttt 21281425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 23824517 - 23824453
Alignment:
Q  178 tgtttattaaatagatttataatctatttaag-aaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||| ||| |||||||| || ||||||||||||||||    
T  23824517 tgtttattaaatagttttatattctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtt 23824453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 30767689 - 30767773
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  30767689 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 30767773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 34949692 - 34949602
Alignment:
Q  178 tgtttattaaatagatttat---aatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| |   | |||||||| |||| |||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  34949692 tgtttattaaatagattttttttattctatttatgaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 34949602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 44523908 - 44523948
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  44523908 tttattaaatagttttatattctatttaagaaattttgaaa 44523948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 17613868 - 17613829
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaag 222  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  17613868 attaaatagttttatattctatttaagaaattttgaaaag 17613829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 18609646 - 18609587
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgttt 241  Q
    ||||||||| |||||| |||||||| ||||||||||||| |  |||||||||||||||||    
T  18609646 attaaatagttttatattctatttacgaaattttgaaaatgaagtgtgacatgcccgttt 18609587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 20840583 - 20840646
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttggga 245  Q
    ||||||||| ||||||  |||||||||||| ||||||  ||| |||||||||||||||||||||    
T  20840583 attaaatagttttatatgctatttaagaaaatttgaattagtagtgtgacatgcccgtttggga 20840646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 22064238 - 22064308
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaa-ttttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||| |||||||||||||  ||| ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  22064238 tgttaattaaatagatttttatattctatttaagaaaattttgaaaatgtagtgtgacatgcccgtttggg 22064308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 8415584 - 8415650
Alignment:
Q  178 tgtttattaaataga-tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttg 242  Q
    ||||||||||||||| |||||| |||||||||||| |||| |||| || ||||||||| ||||||||    
T  8415584 tgtttattaaatagattttatattctatttaagaattttttaaaatgtagtgtgacatacccgtttg 8415650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 21668491 - 21668408
Alignment:
Q  68 aggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttg-aaaatatcccgctgcaaa 152  Q
    ||||||||||||||| ||||||| ||||| ||| | ||| |||| ||||||| ||||||||  |||| ||||||| ||||||||||    
T  21668491 aggcttttatgccaaaattatttgttggaaaataattatattggatgttgttattatttaa--gttgaaaaatattccgctgcaaa 21668408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 22522591 - 22522633
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  22522591 tctatttaagaaattttgaaaagcagtgtgacattcccgtttg 22522633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 22743226 - 22743184
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaa 220  Q
    |||||||||||||| |||||| ||||||||||| |||||||||    
T  22743226 tgtttattaaatagttttatattctatttaagagattttgaaa 22743184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 29644244 - 29644306
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| ||||||   ||||||| |||||||||||||| ||||  ||||||||||    
T  29644244 tgtttattaaatagttttatatcttatttaataaattttgaaaagtagtgtagcatgcccgtt 29644306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 10949444 - 10949501
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||  ||||||||||||||||||||| |  ||||| ||||||||||    
T  10949444 attaaatagttttattttctatttaagaaattttgaaatgacgtgtggcatgcccgtt 10949501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 10957449 - 10957506
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||  ||||||||||||||||||||| |  ||||| ||||||||||    
T  10957449 attaaatagttttattttctatttaagaaattttgaaatgacgtgtggcatgcccgtt 10957506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 29327544 - 29327480
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||| |||||||||||  ||| ||||||||||||||||||||| || ||||  ||||||||||    
T  29327544 tgtttagtaaatagatttttatattctatttaagaaattttgaaatgtagtgtagcatgcccgtt 29327480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 5239532 - 5239468
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttga-aaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| ||| ||| ||||||||||||||||||| || ||  |||||||||||||||    
T  5239532 tgtttattaaatagtttttatattctatttaagaaattttgataatgtattgtgacatgcccgtt 5239468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 20006010 - 20005919
Alignment:
Q  13 caatctttggaacatgttgatatagccctt-tatttggttgttgaagta-attgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| ||||||||||| |||| |||||||| |||||| |||||||| ||  || ||||||||||||||||| || |||||| ||||| |||||    
T  20006010 caatttttggaacatgctgatgtagcccttgtatttgattgttgaattattttcatgaggcttttatgccagga-tatttagtggagtattaa 20005919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 43686832 - 43686772
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| || |||  |||||||||||||||||||| || ||||  |||||||||||||    
T  43686832 attaaatagtttcatatgctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 43686772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 62 - 240
Target Start/End: Original strand, 24338 - 24517
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||| ||||||||||||||||||||||| | ||| |||||| ||||||||||| ||||| ||||||||||| |||||||||||| | ||||    
T  24338 ttgatgaggctttcatgccaagattatttattggagattaaatttgttgggtgttgttgtta-ttaaaagttgaaaatattccgctgcaaagttttgatg 24436  T
Q  162 aaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||   |||||||| |||||||| ||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||    
T  24437 aaatgatttaagttggttgtttagtaaatagttttatactctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 24517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 62 - 240
Target Start/End: Original strand, 18712 - 18890
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| | ||||| ||||||||||| |||||||||||| | ||||    
T  18712 ttgatgaggcttttatgccaagattatttattggagattaaatatgttggatgttgttgtca-ttaaaagttgaaaatattccgctgcaaagttttgatg 18810  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtt 240  Q
    |||   || |||||| |  ||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||    
T  18811 aaatgattaaagttggttgttattaaatagttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 18890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 66 - 261
Target Start/End: Original strand, 157317 - 157513
Alignment:
Q  66 tgaggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaa 164  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||| |||||||| || ||||| ||  || | ||| |||    
T  157317 tgaggcttttatgccaagatttaattattggagaattaatatgttggatgttgatgttatttaaaggttgaaaacattccgctacatggttttgatcaaa 157416  T
Q  165 ccgtttaagttgttgttt-attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatg 261  Q
       || ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||    
T  157417 ttatt-aagttgtggttttattaaatagttttataatctatttaagaaattttgaaaagtagtgtgacatgcccgttttggaaatactctgatgtatg 157513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 5794 - 5553
Alignment:
Q  18 tttggaacatgttgatatagccctttatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaatatgttggttgtt 116  Q
    ||||||||| | |||| |||||||||  ||| ||| |||| || || |||||||||||||||||| ||||||||| |||||||||||| |||||| ||||    
T  5794 tttggaacacgctgatgtagcccttttgttgattgatgaattattttgatgaggcttttatgccaggattatttagtggagaattaat-tgttggatgtt 5696  T
Q  117 gttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaag-ttgttgtttattaaatagatttataatctatttaagaaattt 215  Q
    |||||||||| |||||||||||||| ||||||||| || | | ||||||   | | | |||| ||||||||||||| |||||| || |||||||||||||    
T  5695 gttgttattt-aatgttgaaaatattccgctgcaaggttttggtgaaactaataacgtttgtggtttattaaatagttttatattccatttaagaaattt 5597  T
Q  216 tgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||| ||||||||||||||||| ||| ||||||| ||||||    
T  5596 tgaaaagtagtgtgacatgcccgttt-ggatatactctgatgtat 5553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 8332 - 8263
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||||||    
T  8332 tgtttattaaatagattttatattctatttaataaattttgaaaatgtagtgtgacatgcccgtttggga 8263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 86; Significance: 4e-41; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 62 - 260
Target Start/End: Original strand, 130253 - 130445
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    ||||||||||||||||||||||| | |||| |||||||| || |  || | |||||||||| |||||    ||||||||| |||||||||||| | ||||    
T  130253 ttgatgaggcttttatgccaagactgtttagtggagaatcaa-acatttgatgttgttgtt-tttaa----tgaaaatattccgctgcaaagttttgatg 130346  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||| ||||||||||||||||||||||||| |||||| || ||||||||||| ||||||||| |||||||||||||||| |||| ||||||| ||||||    
T  130347 aaactgtttaagttgttgtttattaaatagttttatattccatttaagaaatattgaaaagtagtgtgacatgcccgttggggatatactctgatgtat 130445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 115249 - 115184
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  115249 ttgttgtttattaaatag-tttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 115184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 320596 - 320505
Alignment:
Q  175 tgttgtttattaaatagatttataat-ctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||||||||| | || ||||||| ||||||| ||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  320596 tgttgtttattaaatagatttttcattctatttatgaaatttggaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 320505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 326305 - 326214
Alignment:
Q  175 tgttgtttattaaatagatttataat-ctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||| |||||||||||| | || ||||||| ||||| ||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  326305 tgttgttttttaaatagatttttcattctatttatgaaatgttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 326214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 382903 - 382862
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  382903 tctatttaagaaattttgaaaagtagtgtgacattcccgttt 382862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 383525 - 383483
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  383525 tctatttaagaaattttgaaaagcagtgtgacattcccgtttg 383483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 261
Target Start/End: Complemental strand, 8042 - 7852
Alignment:
Q  71 cttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtt 169  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||||  |||||||||||||||||||||| ||||||||| || | | ||||| |  |    
T  8042 cttttatgccaagatttaattattggagaattaatatgttggatgttgacgttatttaaatgttgaaaatattccgctgcaaggttttggtgaaa-ctat 7944  T
Q  170 taagttgttg-tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtatg 261  Q
    |||||| ||| || ||||||||| |||||||||||||||||||||||||||||||  |||||||| ||||||| ||| ||||||| |||||||    
T  7943 taagttattgattcattaaatagttttataatctatttaagaaattttgaaaagt-atgtgacatacccgttttggaaatactctgatgtatg 7852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 72 - 264
Target Start/End: Complemental strand, 27491 - 27296
Alignment:
Q  72 ttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgttt 170  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| || |  ||||||   ||     
T  27491 ttttatgccaagatttaattattggagaattaatatgttggatgttgatgttatttaaatgttgaaaatattccgctgcaaggttttaatgaaatgatta 27392  T
Q  171 aagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||| |||||||||||||||| ||||||  ||||||||||| |||||||  ||| |||||||||||||||||||||  |||||| ||| ||||||    
T  27391 aagttggttgtttattaaatagttttatatactatttaagaagttttgaattagtagtgtgacatgcccgtttgggaattactctgatgcatgttt 27296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 75; Significance: 2e-34; HSPs: 6)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 40986 - 41202
Alignment:
Q  18 tttggaacatgttgatatagccctttatttggttgtt-gaagtaatt-gatgaggcttttatgccaagattatttattggagaattaatatgttggttgt 115  Q
    ||||||||||| |||| |||||||||  ||||||||| ||| || || |||||||||||||||||| ||||||||| ||||||||||| |  || | |||    
T  40986 tttggaacatgctgatgtagcccttttattggttgtttgaattattttgatgaggcttttatgccaggattatttagtggagaattaa-acatttgatgt 41084  T
Q  116 tgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattt 215  Q
    |||||||||||||   |  ||||||| ||||||||| || | | ||||||   | |||||| |||||||||||||| |||||| ||||||||||||||||    
T  41085 tgttgttatttaa---tgaaaaatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatagttttatattctatttaagaaattt 41181  T
Q  216 tgaaaagtggtgtgacatgcc 236  Q
    |||||||| ||||||||||||    
T  41182 tgaaaagtagtgtgacatgcc 41202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 33944 - 33875
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  33944 tgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 33875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 16010 - 15928
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatg 261  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| |  |||||||||||||||||||||  |||||| |||||||    
T  16010 ttattaaatagattttatattctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttgggatttactctgatgtatg 15928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 17106 - 17028
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatat 141  Q
    |||||||||||||||||||| || ||||||||||||| |   ||| |||| ||||||||||| ||||| |||||||||||    
T  17106 ttgatgaggcttttatgccatgaatatttattggagattatttatattggatgttgttgttaattaaa-gttgaaaatat 17028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 23629 - 23551
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatat 141  Q
    |||||||||||||||||||| || ||||||||||||| |   ||| |||| ||||||||||| ||||| |||||||||||    
T  23629 ttgatgaggcttttatgccatgaatatttattggagattatttatattggatgttgttgttaattaaa-gttgaaaatat 23551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 23514 - 23432
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatg 261  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| |  |||||||||||| ||||||||  |||||| |||||||    
T  23514 ttattaaatagattttatattctatttaagaaaatttgaaaatgaagtgtgacatgcctgtttgggatttactctgatgtatg 23432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 63746 - 63897
Alignment:
Q  66 tgaggcttttatgccaagatt-atttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaa 164  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||| || | |||||||    
T  63746 tgaggcttttatgccaagatttaattattggagaattaatatgttggatgttggtgttatttaaaggttgaaaatattccgctgcaaggttttgatgaaa 63845  T
Q  165 ccgtttaagttgttg-tttattaaatagatttataatctatttaagaaatttt 216  Q
        ||||||||| | |||||||||||| || |||||||||||||||||||||    
T  63846 -ttattaagttgtggatttattaaatagtttaataatctatttaagaaatttt 63897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 28591 - 28677
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||| ||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||||| ||| ||||||| ||||||    
T  28591 ttgttgttcattaaatagttttatattctatttaagaaattttaaaaagtagtgtgacatgcccgtttaggatatactctgatgtat 28677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 117661 - 117488
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaa-tatcccgctgcaaagtctcgatgaaa 164  Q
    |||||||||||||||| |||||||  |||||||||||| | ||| | ||||| |||||||||  | ||||||| ||| ||||||||| || | | |||||    
T  117661 tgaggcttttatgccaggattattatttggagaattaa-acgtttgatgttgatgttatttat-tattgaaaaatattccgctgcaaggttttggtgaaa 117564  T
Q  165 ccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |   | |||||| ||||||||||||||  || || |||||||||||||||||||||| | ||||||||||||||||    
T  117563 ctaataaagttgatgtttattaaatagtattctattctatttaagaaattttgaaaattagtgtgacatgcccgtt 117488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 125122 - 125211
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  125122 tgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgtatgttt 125211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 24255 - 24087
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttg-aaaatatcccgctgcaaagtctcgatgaaa 164  Q
    |||||| ||| ||||| ||||  ||||||||||||||| ||||| | ||||| ||| |||||    ||| ||||||| |||||||||||| | | |||||    
T  24255 tgaggcctttgtgccaggatttattattggagaattaa-atgtttgatgttgatgtaattta----ttgaaaaatattccgctgcaaagttttggtgaaa 24161  T
Q  165 ccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |   |||||||| | ||||||||||||  || || ||||||||||||| |||||||||  ||||||||| ||||||    
T  24160 ctaattaagttgat-tttattaaatagtattttattctatttaagaaa-tttgaaaagcagtgtgacattcccgtt 24087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 61529 - 61746
Alignment:
Q  18 tttggaacatgttgatatagccctttatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaatatgttggttgtt 116  Q
    ||||||||||| |||| |||||||||||| |||||||||| || || |||||||||||||||||| ||||||||| ||||||||||| |  |||   |||    
T  61529 tttggaacatgctgatgtagccctttatt-ggttgttgaattattttgatgaggcttttatgccaggattatttagtggagaattaa-acattgac-gtt 61625  T
Q  117 gttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaatttt 216  Q
    |||| |||||||   |  ||||||| ||||||||| || | | || |||   | |||||| |||||||||||||| |||||| |||||||||||||||||    
T  61626 gttgatatttaa---tgaaaaatattccgctgcaaggttttggtggaactaataaagttgatgtttattaaatagttttatattctatttaagaaatttt 61722  T
Q  217 gaaaagtggtgtgacatgcccgtt 240  Q
    ||||||| ||||||||||||||||    
T  61723 gaaaagtagtgtgacatgcccgtt 61746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 240
Target Start/End: Original strand, 73419 - 73634
Alignment:
Q  20 tggaacatgttgatatagccctttatttggttgttgaagtaatt-gatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgt 118  Q
    ||||||||| | || |||||||||||| |||||||||| || || |||||||||||||||||| ||||||||| ||||||||||| |  |||   |||||    
T  73419 tggaacatgctaatgtagccctttatt-ggttgttgaattattttgatgaggcttttatgccaggattatttagtggagaattaa-acattgac-gttgt 73515  T
Q  119 tgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttga 218  Q
    ||||||||||   |  ||||||| ||||||||| || | | ||||||   | |||||| |||||||||||||| |||||| |||||||||||||||||||    
T  73516 tgttatttaa---tgaaaaatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatagttttatattctatttaagaaattttga 73612  T
Q  219 aaagtggtgtgacatgcccgtt 240  Q
    ||||| |||||||||| |||||    
T  73613 aaagtagtgtgacatgtccgtt 73634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 67; Significance: 9e-30; HSPs: 4)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 62 - 164
Target Start/End: Original strand, 47305 - 47406
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    |||||||||| |||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| ||||||||||| |||||||||||| | ||||    
T  47305 ttgatgaggcgtttatgccaagattatttattggagattaaatatgttggatgttgttgttatttaaa-gttgaaaatattccgctgcaaagttttgatg 47403  T
Q  162 aaa 164  Q
    |||    
T  47404 aaa 47406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 28229 - 28148
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||| | ||||||||||||||||||| ||||||| ||||    
T  28229 tgtttattaaatagttttatattctatttaagaaaattttgaaaagtagcgtgacatgcccgtttgggatatactctgatgt 28148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 35707 - 35628
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||||||||| |||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  35707 tttattaaatagttttatattctgtttaagaaaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgt 35628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 37839 - 37755
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  37839 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 37755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 452361 - 452489
Alignment:
Q  133 tgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgac 231  Q
    ||||| ||| |||||||||||| | | ||||||  || ||||| |||||| ||||||||| |||||| ||||||||||||||||| |||||| |||||||    
T  452361 tgaaagtattccgctgcaaagttttggtgaaactattaaagtttgttgttcattaaatagttttatattctatttaagaaattttaaaaagtagtgtgac 452460  T
Q  232 atgcccgtttgggacatactcttatgtat 260  Q
    |||||||||||||| ||||||| ||||||    
T  452461 atgcccgtttgggatatactctgatgtat 452489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 95348 - 95288
Alignment:
Q  200 tctatttaagaaattttgaaaa-gtggtgtgacatgcccg-tttgggacatactcttatgt 258  Q
    ||||||| |||||||||||||| || |||||||||||||| ||||||| ||||||| ||||    
T  95348 tctatttgagaaattttgaaaatgtagtgtgacatgcccgttttgggatatactctgatgt 95288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 525587 - 525538
Alignment:
Q  185 taaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||||||||   ||||||||||||||||| | ||||||||||||||||    
T  525587 taaatagatttatc--ctatttaagaaattttgtatagtggtgtgacatgcc 525538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 264
Target Start/End: Original strand, 3860 - 4063
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaat-atgttggttgttgttgttatttaaatgttg-aaaatatcccgctgcaaagtctcga 159  Q
    ||||||||| ||||||||||||  ||||| |||||| |||||| ||||||| ||||||||||||||||  |||| ||||||| ||||||||| || | ||    
T  3860 ttgatgaggtttttatgccaaggctatttgttggag-attaatcatgttggatgttgttgttatttaa--gttgaaaaatattccgctgcaaggttttga 3956  T
Q  160 tgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatg 257  Q
    |||||   || ||||| |||||| ||||||||| ||||||  ||||||||||||  |||||  ||| |||||||||||||||||||||  |||||| |||    
T  3957 tgaaatgattaaagttggttgttaattaaatagttttatatactatttaagaaaaattgaattagtagtgtgacatgcccgtttgggatttactctgatg 4056  T
Q  258 tatgttt 264  Q
    |||||||    
T  4057 tatgttt 4063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 260
Target Start/End: Complemental strand, 27642 - 27412
Alignment:
Q  30 tgatatagccctttat-ttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||| ||||||||| | ||| |||| ||| ||||||||||| ||||||||||||||||||||  ||||||||||| | |||| |  |||||||| |||      
T  27642 tgatgtagccctttttgttgattgtagaattaattgatgagacttttatgccaagattattttatggagaattaaaaggttgatgtttgttgttgttttt 27543  T
Q  129 atgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtg 227  Q
    |   | ||||  | ||||||||| || | | ||||||   | ||||| || ||||||||||||| |||||| ||||||||||||| |||||||||| |||    
T  27542 aa--taaaaaatttccgctgcaaggttttggtgaaactaataaagtttgtggtttattaaatagttttatattctatttaagaaaatttgaaaagtagtg 27445  T
Q  228 tgacatgcccgtttgggacatactcttatgtat 260  Q
    ||||||||||||||| || ||||||| ||||||    
T  27444 tgacatgcccgtttgagatatactctgatgtat 27412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 22159 - 22093
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtg--gtgtgacatgcccgtttggg 244  Q
    |||||||||||| |||||| ||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  22159 tttattaaatagttttatattctatttaagaaaatttgaaaaatgaagtgtgacatgcccgtttggg 22093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 56601 - 56678
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  56601 attaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 56678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 56451 - 56540
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| ||||||||||| |||| |||||||||  ||| |||||||| |   ||||||||||||||||||| || |||||| ||||| |||||    
T  56451 caatttttggaacatgatgatgtagcccttttattgattgttgaatttcatgatgaggcttttatgccagga-tatttaatggagtattaa 56540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 208234 - 208311
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  208234 attaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgtat 208311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 133 - 260
Target Start/End: Complemental strand, 76276 - 76148
Alignment:
Q  133 tgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgac 231  Q
    ||||||||| ||||||||| || | | ||||||  || ||||| |||||| ||||||||| |||||| |||||||||||||||||||||||  |||||||    
T  76276 tgaaaatattccgctgcaaggttttggtgaaactattaaagtttgttgttcattaaatagttttatattctatttaagaaattttgaaaagaagtgtgac 76177  T
Q  232 atgcccgtttgggacatactcttatgtat 260  Q
    |||||||||||||| ||||| | ||||||    
T  76176 atgcccgtttgggatatactatgatgtat 76148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 245
Target Start/End: Complemental strand, 70721 - 70547
Alignment:
Q  68 aggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttg-aaaatatcccgctgcaaagtctcgatgaaacc 166  Q
    ||||||||||||||||||||||| ||||||||| | |||||||| ||||||| ||||||||  |||| ||||||| ||||||||||   |  || | |      
T  70721 aggcttttatgccaagattatttgttggagaataattatgttggatgttgttattatttaa--gttgaaaaatattccgctgcaaa--tttaataataat 70626  T
Q  167 gtttaagttgttgtttattaaataga-tttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttggga 245  Q
     || |||  | ||||||||||||||| |||||| ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  70625 tttgaag--gatgtttattaaatagattttatattctatttaagaaattttgaattagtagtgtgacatgcccgtttggga 70547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 29310 - 29231
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactct 253  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  29310 ttgttgttcattaaatagttttatattctatttaagaaattttgaagagtagtgtgacatgcccgtttgggatatactct 29231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 44089 - 44007
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||| ||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||||||| || |||| ||||||    
T  44089 tgttcattaaatagttttatattctatttaagaaaatttgaaaagtagtgtgacatgcccgtttgggatattctctaatgtat 44007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 2495 - 2715
Alignment:
Q  18 tttggaacatgttgatatagccctttatttggttgttgaagta-attgatgaggcttttatgccaaga-ttatttattggagaattaatatgttggttgt 115  Q
    ||||||||||| |||| |||||||||| |||||||||||| ||  |||||||||||||||||||| || ||| ||| ||||||||||| |  || | |||    
T  2495 tttggaacatgctgatgtagcccttta-ttggttgttgaattattttgatgaggcttttatgccaggatttacttagtggagaattaa-acatttgatgt 2592  T
Q  116 tgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattt 215  Q
    |||||||||||||   |  ||||||| ||||||||| || | | ||||||   | ||||||||||||||||| |||  || ||  ||||||||||||||     
T  2593 tgttgttatttaa---tgaaaaatattccgctgcaaggttttggtgaaactaataaagttgttgtttattaagtagtattgtatactatttaagaaatta 2689  T
Q  216 tgaaaagtggtgtgacatgcccgttt 241  Q
    ||||| || |||||||||||||||||    
T  2690 tgaaatgtagtgtgacatgcccgttt 2715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 800 - 731
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttggg 244  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  800 ttgttgtttattaaatag-tttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttggg 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 906 - 865
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||||||||||||||| | |||| |||||||||||    
T  906 ttgatgaggcttttatgccaagactgtttagtggagaattaa 865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 260
Target Start/End: Original strand, 6244 - 6475
Alignment:
Q  30 tgatatagccctttatttgg-ttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||| ||||||||||| | | |||||||| ||||||||||| ||||||||||||||||||||  ||||| |||||   ||||    |||||||| |||      
T  6244 tgatgtagccctttatgtcgattgttgaattaattgatgagacttttatgccaagattattttatggaggattaaacggttgaagtttgttgttgtttt- 6342  T
Q  129 atgttgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaat-tttgaaaagtggt 226  Q
     || ||||||||| ||||| || ||| | | ||||||   | ||||| || ||||||||||||| |||||| ||||||||| |||  |||||||||| ||    
T  6343 -tgatgaaaatattccgctccagagttttggtgaaactaataaagtttgtggtttattaaatagttttatattctatttaaaaaaaatttgaaaagtagt 6441  T
Q  227 gtgacatgcccgtttgggacatactcttatgtat 260  Q
    ||||||||||||||||||| ||||||| ||||||    
T  6442 gtgacatgcccgtttgggatatactctgatgtat 6475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 18024 - 17942
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||||    
T  18024 tgtttattaaatagtgttataatatatttaagaaattttgaaaagtagtgtgacatgcccgtttgagatatactctgatgtat 17942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 173566 - 173651
Alignment:
Q  42 ttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||||||||| || |||||| |||||||||    
T  173566 ttatttggttgttgaattaattgatgaggcttttatgtcaagatt-tttattgaagaattaatatgtgggatgttgtggttatttaa 173651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 173702 - 173767
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||||||| | |||||| ||||||||||||| |||  ||||| |||||||||||||||||||||    
T  173702 tttattaaatggttttatattctatttaagaaaattttgaaagtagtgtgacatgcccgtttggga 173767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 91 - 243
Target Start/End: Original strand, 9903 - 10054
Alignment:
Q  91 attggagaattaatatgttggttgttgttgttatttaaatgttgaaaa-tatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaat 189  Q
    ||||||||||||| ||||||| ||||| |||||||||  | ||||||| ||| |||||||||||| | | ||||||  |  |||||| ||||||||||||    
T  9903 attggagaattaa-atgttggatgttgatgttatttat-tattgaaaaatattccgctgcaaagttttggtgaaactatcaaagttgatgtttattaaat 10000  T
Q  190 agatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||  ||||| |||||||||||||||||||| ||| | |||||||||||||||||    
T  10001 agtattatattctatttaagaaattttgaatagtagagtgacatgcccgtttgg 10054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 27278 - 27370
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||  |||||||||||    
T  27278 caatttttggaacatgtggatgtagccctttatttggttgttgaatttatcttgatgaggcttttatgccaagattattttatggagaattaa 27370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 27434 - 27509
Alignment:
Q  178 tgtttattaaatagatt-tataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatact 251  Q
    |||||||||||||| || |||| |||||||||||||||||||||| || |||||||||| |||||||||| |||||    
T  27434 tgtttattaaatagtttgtatattctatttaagaaattttgaaaatgttgtgtgacatgtccgtttgggatatact 27509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 4757 - 4824
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  4757 ttgttgttcattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 4824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 3025 - 3202
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    |||||||||||||||||||| ||||| ||||||||||||||| |  || | ||||| |||||| |||   |  ||||||| ||||||||| || | | ||    
T  3025 ttgatgaggcttttatgccaggattaattattggagaattaa-acatttgatgttgatgttatgtaa---tgaaaaatattccgctgcaaggttttggtg 3120  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||   | |||||| ||||||||||||||  | ||| |||||||||| |||||||| |||| |||||||||||||||||||    
T  3121 aaactaataaagttgatgtttattaaatagtatcatattctatttaaggaattttgagaagtagtgtgacatgcccgtttgg 3202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 4765 - 4827
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  4765 gtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 4827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 10652 - 10694
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  10652 tctatttaagaaattttgaaaagcagtgtgacattcccgtttg 10694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 1581 - 1667
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||||| ||||||||||  |||||| || ||||||| ||||||    
T  1581 ttgttgttcattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatggtcgtttgtgatatactctgatgtat 1667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 7815 - 7857
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  7815 tctatttaagaaattttgaaaagcagtgtgacattcccgtttg 7857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 198 - 284
Alignment:
Q  180 tttattaaatagatt-tataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||||||||  |||||| ||||||||||    
T  198 tttattaaatagtttatataatctatttaagaaattttgaaatagtagtgtgacatgcccgtttgggaattactctgatgtatgttt 284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 643 - 768
Alignment:
Q  133 tgaaaatatcccgctgcaaagtctcgatgaaaccgtttaagtt-gttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgac 231  Q
    ||||||||| ||||||||| || | | ||||||  || ||||| |||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  643 tgaaaatattccgctgcaaggttttggtgaaactattaaagtttgttgttcattaaatagttttatattctatttaagaaattttgaaaagtagtgtgac 742  T
Q  232 atgcccgtttgggacatactcttatgtat 260  Q
    |||   |||||||| ||||||| ||||||    
T  743 atg---gtttgggatatactctgatgtat 768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 20149 - 20087
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  20149 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 20087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 9031 - 8969
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||||||||||||||| | ||||||||||||||||    
T  9031 tgtttattaaatagttttatattctatttaagaaattttgaaaattagtgtgacatgcccgtt 8969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 62453 - 62515
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  62453 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 62515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 62342 - 62407
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||||||||||||||||||| |||| |||| ||||||||||| |  || | ||||||||||||||||    
T  62342 ttgatgaggcttttatgccaggattgtttagtggagaattaa-acatttgatgttgttgttatttaa 62407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 14227 - 14135
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaatt--gatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| |||||||||||||||| |||||||||||||| |||||| | | |||  |||||||||||||||||||||||||||  |||||||||||    
T  14227 caatttttggaacatgttgatgtagccctttatttgattgttggatttattttgatgaggcttttatgccaagattattttatggagaattaa 14135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 17997 - 17905
Alignment:
Q  13 caatctttggaacatgttgatatagccctttatttggttgttgaagtaatt--gatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| |||||||||||||||| |||||||||||||| |||||| | | |||  |||||||||||||||||||||||||||  |||||||||||    
T  17997 caatttttggaacatgttgatgtagccctttatttgattgttggatttattttgatgaggcttttatgccaagattattttatggagaattaa 17905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 1317 - 1382
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  1317 tttattaaatagttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggg 1382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 23850 - 23770
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttgggacatactcttatgt 258  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  23850 tgtttattaaatag-tttatattctatttaagaaaattttgaaaagtagtgtgacatgcccgtttgggatatactctgatgt 23770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 55442 - 55354
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  55442 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 55354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 49; Significance: 5e-19; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 39221 - 39289
Alignment:
Q  35 tagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||  |||||||||||    
T  39221 tagccctttatttggttgttgaaataattgatgaggcttttatgccaagaatactttatggagaattaa 39289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 137281 - 137349
Alignment:
Q  35 tagccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||  |||||||||||    
T  137281 tagccctttatttggttgttgaaataattgatgaggcttttatgccaagaatactttatggagaattaa 137349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 39371 - 39420
Alignment:
Q  193 tttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||| ||||||||||||| |||| ||||| |||||||||| |||||||    
T  39371 tttatattctatttaagaaaatttgcaaagtagtgtgacatgtccgtttg 39420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 137431 - 137480
Alignment:
Q  193 tttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||| ||||||||||||| |||| ||||| |||||||||| |||||||    
T  137431 tttatattctatttaagaaaatttgcaaagtagtgtgacatgtccgtttg 137480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 6083 - 6146
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||    
T  6083 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtttgacatgcccgttt 6146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 13985 - 14048
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||    
T  13985 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtttgacatgcccgttt 14048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 8029 - 7969
Alignment:
Q  193 tttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactct 253  Q
    |||||| |||||||||||| |||||||| || ||||||||||||||||||||| |||||||    
T  8029 tttatattctatttaagaatttttgaaatgtagtgtgacatgcccgtttgggatatactct 7969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 15931 - 15871
Alignment:
Q  193 tttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgggacatactct 253  Q
    |||||| |||||||||||| |||||||| || ||||||||||||||||||||| |||||||    
T  15931 tttatattctatttaagaatttttgaaatgtagtgtgacatgcccgtttgggatatactct 15871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 12300 - 12383
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg-gacatactcttatgtat 260  Q
    |||||||||||||| |||||| |||||||||||||||||||||||   |||||||||||||||||| || ||||||| ||||||    
T  12300 tgtttattaaatagttttatattctatttaagaaattttgaaaagcaatgtgacatgcccgtttggtgatatactctgatgtat 12383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 14516 - 14466
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgt 228  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  14516 tgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgt 14466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 39190 - 39137
Alignment:
Q  193 tttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttggga 245  Q
    |||||| ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  39190 tttatattctatttaagaaattttgaattagtagtgtgacatgcccgtttggga 39137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 18756 - 18912
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaaagtctcgatg 161  Q
    |||||||||||||||||||| ||||||||||||||||||||| |  || | |||||  |||||||||   |  ||||||| ||||||||| || | | ||    
T  18756 ttgatgaggcttttatgccacgattatttattggagaattaa-acatt-gatgttgacgttatttaa---tgaaaaatattccgctgcaaggttttggtg 18850  T
Q  162 aaaccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagt 223  Q
    ||||   | |||||| ||||||||||||||  ||||| ||||||||||||||||||||||||    
T  18851 aaactaataaagttggtgtttattaaatagtattatattctatttaagaaattttgaaaagt 18912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 264773 - 264689
Alignment:
Q  20 tggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||| ||| | ||||||| ||||||| | | ||  ||||||||||||||||||||||||| ||  |||||||||||    
T  264773 tggaacatgttgatgtagtc-tttatttagttgttggaattatgatgatgaggcttttatgccaagattactttatggagaattaa 264689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 14136 - 14197
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||    
T  14136 tgaggcttttatgccaagatt-tttattggagaattaatatgttggatgttgtggttatttaa 14197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 7789 - 7867
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg-gacatactcttatgtat 260  Q
    ||||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||| || ||||||| ||||||    
T  7789 attaaatagttttatattctatttaagaaattttgaaaagcagtgtgacatgcccgtttggtgatatactctgatgtat 7867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 6248 - 6182
Alignment:
Q  37 gccctttatttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||  |  |||||||||||    
T  6248 gccctttatttggttgttgaaataattgatgaggcttttatgccaagattacattatggagaattaa 6182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 20213 - 20171
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||||||||||||  |||||| |||||||||||    
T  20213 tctatttaagaaattttgaaaagcagtgtgatatgcccgtttg 20171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 6566 - 6501
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||| |||||    
T  6566 tgtttattaaatagttttatattctatttaagaaattttaaaaagtagtgtgacatgcccatttgg 6501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 12097 - 12028
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  12097 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 12028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 6553 - 6641
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||  |||||||| |||||||||||  |||||| ||||||||||    
T  6553 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtaatgtgacatacccgtttgggaattactctgatgtatgttt 6641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 671 - 735
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  671 tgtttattaaatagtttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgttt 735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 11324 - 11388
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaatttt-gaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  11324 tgtttattaaatagttttatattctatttaagaaattttagaaaagtagtgtgacatgcccgttt 11388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 19504 - 19568
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaatttt-gaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  19504 tgtttattaaatagttttatattctatttaagaaattttagaaaagtagtgtgacatgcccgttt 19568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 32165 - 32097
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  32165 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 32097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 82647 - 82715
Alignment:
Q  179 gtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||    
T  82647 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggga 82715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 16712 - 16779
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||  |||||||||||||||||||    
T  16712 tgtttattaaatagttttatattctatttaagaaattttgaaaatgtattgtgacatgcccgtttggg 16779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 23371 - 23434
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||| |||||||||| ||||||    
T  23371 tgtttattaaatagttttatattctatttaagaaatttcgaaaagtagtgtgacatgtccgttt 23434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 27568 - 27631
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||| |||||||||| ||||||    
T  27568 tgtttattaaatagttttatattctatttaagaaatttcgaaaagtagtgtgacatgtccgttt 27631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 60 - 2
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  60 attaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatacccgttt 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 25735 - 25673
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| |||||| |||||||||||||||||||||||  ||||||||||| ||||    
T  25735 tgtttattaaatagttttatattctatttaagaaattttgaaaagcagtgtgacatgcgcgtt 25673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 31384 - 31327
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||    
T  31384 attaaatagttttatattctatttaagaaattttgaaaagcagtgtgacatgcccgtt 31327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 25843 - 25806
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||| |||||||||||||||||||||    
T  25843 tgaggcttttatgccaggattatttattggagaattaa 25806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 33658 - 33572
Alignment:
Q  180 tttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||||||  |||||| ||| ||||||    
T  33658 tttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgtccgtttgggaattactctgatgcatgttt 33572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 26830 - 26769
Alignment:
Q  204 tttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  26830 tttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 26769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 16469 - 16380
Alignment:
Q  178 tgtttattaaatagattt--ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||| || ||||||||||| |||||||||  |||||| ||| ||||||    
T  16469 tgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgcgcgtttgggaattactctgatgcatgttt 16380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 4393 - 4455
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |||||||||||||| | |||| |||||||||||||||||||||||  ||||||||||||||||    
T  4393 tgtttattaaatagttatatattctatttaagaaattttgaaaagcagtgtgacatgcccgtt 4455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 1075 - 1156
Alignment:
Q  184 ttaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||| |||||| ||||||||||||| |||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  1075 ttaaatagttttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 3767 - 3852
Alignment:
Q  181 ttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  3767 ttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 3852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 1748 - 1813
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||| ||||||    
T  1748 tttattaaatagttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccatttggg 1813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 8684 - 8749
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||| ||||||    
T  8684 tttattaaatagttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccatttggg 8749  T

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Target: scaffold0130 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 12180 - 12115
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| |||||||||||||||||||||||  ||||  |||||||||||||    
T  12180 tgtttattaaatagttttatattctatttaagaaattttgaaaagcagtgtagcatgcccgtttgg 12115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 15318 - 15253
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||  | |||||||||||||||||    
T  15318 tgtttattaaatagttttatattctatttaagaaaatttgaaaagcagggtgacatgcccgtttgg 15253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 15423 - 15382
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||||||||||| |||||||||  |||||||||||    
T  15423 ttgatgaggcttttatgcctagattattttatggagaattaa 15382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 108396 - 108335
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaatttt-gaaaagtggtgtgacatgcccgt 239  Q
    ||||||||||||| |||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  108396 gtttattaaatagttttatattctatttaagaaattttagaaaagtagtgtgacatgcccgt 108335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 117018 - 116957
Alignment:
Q  179 gtttattaaatagatttataatctatttaagaaatttt-gaaaagtggtgtgacatgcccgt 239  Q
    ||||||||||||  |||||| ||||||||||||||||| ||||||| |||||| ||||||||    
T  117018 gtttattaaatacttttatattctatttaagaaattttagaaaagtagtgtgatatgcccgt 116957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 74857 - 74910
Alignment:
Q  193 tttataatctatttaagaaattttg--aaaagtggtgtgacatgcccgtttggg 244  Q
    |||||| ||||||||||||||||||  ||| || ||||||||||||||||||||    
T  74857 tttatattctatttaagaaattttgataaatgtagtgtgacatgcccgtttggg 74910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1340 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1340
Description:

Target: scaffold1340; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 1920 - 1832
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || ||||||||||||| ||||| |  |||||| ||| ||||||    
T  1920 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccttttggtaattactctgatgcatgttt 1832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 7995 - 7927
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||| |||||  ||||||||||||| |||| |||||| |||||||||||||||||||||    
T  7995 tgtttattaaatagttttatgttctatttaagaaatttttaaaaagtagtgtgacatgcccgtttggga 7927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 136903 - 136816
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||||||  |||||| ||| ||||||    
T  136903 tgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatg-ccgtttgggaattactctgatgcatgttt 136816  T

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Target: scaffold1496 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 138 - 197
Alignment:
Q  183 attaaatagatttataatctatttaagaaatttt-gaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||| |||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  138 attaaatagttttatattctatttaagaaattttggaaaagttgtgtgacatgcccgttt 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1496; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 3 - 77
Alignment:
Q  30 tgatatagccctttat-ttggttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||| ||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||  |||||| ||||    
T  3 tgatgtagccctttttgttgattgttgaattaattgatgaggcttttatgccaagattattttatggagacttaa 77  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1311 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 1846 - 1790
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| ||||||||||||    
T  1846 tgtttattaaatag--ttatattctatttaagaaattttgaaaagttgtgtgacatgcc 1790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 52352 - 52440
Alignment:
Q  176 gttgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||| ||||||||||||||| ||| ||||||||||||  |||||||| || |||||||||||||||||||||  |||||||||| ||||||    
T  52352 gttgcttattaaatagattttatactctatttaagaa--tttgaaaatgtagtgtgacatgcccgtttgggaattactcttatgcatgttt 52440  T

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Target: scaffold0076; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 30884 - 30968
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  30884 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 30968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 36285 - 36369
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  36285 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 36369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 52243 - 52303
Alignment:
Q  68 aggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    |||||||||||||||||||| |  ||||||||| | ||| |||| ||||||| ||||||||    
T  52243 aggcttttatgccaagattaatagttggagaataattatattggatgttgttattatttaa 52303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 3360 - 3419
Alignment:
Q  174 ttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacat 233  Q
    |||||||| ||||||||| |||||| |||||| ||||||||||||||||| |||||||||    
T  3360 ttgttgttcattaaatagttttatattctattaaagaaattttgaaaagtagtgtgacat 3419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 1933 - 1991
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||  |||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  1933 attaaataattttatattctatttaagaaattttgaaaagtagtgtgacatgaccgttt 1991  T

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Target: scaffold1290; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 1786 - 1872
Alignment:
Q  18 tttggaacatgttgatatagccctttatttggttgttgaagta-attgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||| |||| |||||||||||||| |||||||| ||  ||||||||| || ||| ||| ||||||||| ||||| |||||    
T  1786 tttggaacatgctgatgtagccctttatttgattgttgaattattttgatgaggtttctataccaggattatttagtggagtattaa 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0990 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0990
Description:

Target: scaffold0990; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 3387 - 3329
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcc 236  Q
    |||||||||||||| |||||| ||| ||||||||||||| |||||| ||||||||||||    
T  3387 tgtttattaaatagttttatattctgtttaagaaattttaaaaagtagtgtgacatgcc 3329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 7205 - 7259
Alignment:
Q  49 gttgttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||    
T  7205 gttgttgaaataattgatgaggcttttatgccaagattactttatggagaattaa 7259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 18197 - 18279
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| | |||| ||||||||||||| ||| |||| || |||||||||||||||||||||  |||||| ||||||||||    
T  18197 attaaatagttctatattctatttaagaaaatttaaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 18279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 7340 - 7411
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgtt 263  Q
    |||||| ||||||||||||| |||||||| |  |||||||||||||||||||||  |||||| ||| |||||    
T  7340 tttatattctatttaagaaaatttgaaaacgaagtgtgacatgcccgtttgggatttactctgatgaatgtt 7411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 38248 - 38330
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| ||||||  |||||||||||| ||||||  ||| |||||||||||||||||||||  |||||| ||||||||||    
T  38248 attaaatagttttatatgctatttaagaaaatttgaattagtagtgtgacatgcccgtttgggatttactctgatgtatgttt 38330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 253137 - 253076
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| |||||| |||||||||    
T  253137 tgaggcttttatgccaagatt-tctattggagaattattatgttggatgttgtggttatttaa 253076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 253010 - 252947
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||  ||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  253010 tttattaaatagtattattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 252947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 29177 - 29116
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaa 128  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| ||||||  ||||||||    
T  29177 tgaggcttttatgccaagatt-tttattggagaattaacatgttggatgttgtgattatttaa 29116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 4882 - 4951
Alignment:
Q  35 tagccctttatttggttg-ttgaagtaattgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||||| || ||  |||||||||||    
T  4882 tagccctttatttggttaattgaaataattgatgaggcttttatgccaagactactttatggagaattaa 4951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 5022 - 5084
Alignment:
Q  183 attaaatagattt-ataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||| ||| ||||||||||||| |||||| |||  |||||||||||||||||||    
T  5022 attaaatagattttatattctatttaagaaaatttgaacaagaagtgtgacatgcccgtttgg 5084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 7374 - 7415
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  7374 ttgatgaggcttttatgccaggattatttattggagaattaa 7415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 8388 - 8453
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||||||||| ||||||  |||||||||||| |||||||| |  ||||||||||||||||||||    
T  8388 tttattaaatagttttatatcctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttggg 8453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 7383 - 7464
Alignment:
Q  184 ttaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||| |||||| ||||||||||||| |||||||| || ||| |||||||||||||||||  |||||| ||| ||||||    
T  7383 ttaaatagttttatattctatttaagaaaatttgaaaatgtagtgcgacatgcccgtttgggaattactctgatgcatgttt 7464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 17597 - 17678
Alignment:
Q  184 ttaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||| |||||| ||||||||||||| |||||||| || ||| |||||||||||||||||  |||||| ||| ||||||    
T  17597 ttaaatagttttatattctatttaagaaaatttgaaaatgtagtgcgacatgcccgtttgggaattactctgatgcatgttt 17678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 673 - 742
Alignment:
Q  175 tgttgtttattaaatagatttataat-ctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||||||||||| |||||| | | |||||||||||||| ||||||  ||||||||||||||||||    
T  673 tgttgtttattaaatagttttatatttccatttaagaaattttaaaaagtaatgtgacatgcccgtttgg 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 464 - 396
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaaa-ttttgaaaagtggtgtgacatgcccgtttggga 245  Q
    ||||||| |||||| | |||| ||||||||||||| |||| |||||| |||||||||||||||||||||    
T  464 tgtttatgaaatagttatatattctatttaagaaaatttttaaaagtagtgtgacatgcccgtttggga 396  T

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Target: scaffold0126 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 37924 - 37856
Alignment:
Q  178 tgtttattaaatagatttataatctatttaag-aaattttgaaaagtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||| |||||  |||||||||| ||||||| |||||| |||||||||| ||||||||||    
T  37924 tgtttattaaatagttttatgttctatttaagaaaattttaaaaagtagtgtgacatgtccgtttggga 37856  T

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Target: scaffold0109 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 1394 - 1306
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| ||||||| |||  ||||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  1394 tgtttattaaatagattttatattctattttagattttttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 1306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 2189 - 2272
Alignment:
Q  183 attaaatagatttataatctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| |||||||||||||  |||||||| || ||||||||| |||||||||||  |||||| ||||||||||    
T  2189 attaaatagttttatattctatttaagaaaaatttgaaaatgtagtgtgacatacccgtttgggatttactctgatgtatgttt 2272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 12212 - 12267
Alignment:
Q  186 aaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    |||||| |||||| |||||| ||||||||||||||||| |||||||||||| ||||    
T  12212 aaatagttttatattctattgaagaaattttgaaaagttgtgtgacatgcctgttt 12267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 14089 - 14148
Alignment:
Q  202 tatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtat 260  Q
    |||||||||||||||||||| || |||||||||||||||||||||  |||||| ||||||    
T  14089 tatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgtat 14148  T

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Target: scaffold0301; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 1487 - 1413
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaa-attttgaaaagtggtgtgacatgcccgtttgggacatact 251  Q
    |||||||||||||| ||||||  ||||||||||| |||||||||| | ||| |||||| ||||||| || |||||    
T  1487 tgtttattaaatagttttatatcctatttaagaagattttgaaaaatagtgggacatgtccgtttgcgatatact 1413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 1522 - 1564
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  1522 tctatttaagaaattttgaaaagcagtgtgacatgcccgtttg 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 5031 - 4969
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    ||||||||| |||||  |||||||||||||||||||||| || ||||||||||||| ||||||    
T  5031 attaaatagttttattttctatttaagaaattttgaaaatgtagtgtgacatgcccatttggg 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 5142 - 5101
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||||||||||||||||  |||||| ||||    
T  5142 ttgatgaggcttttatgccaagattattttatggagatttaa 5101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 4674 - 4632
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  4674 tctatttaagaaattttgaaaagcagtgtgacatgcccgtttg 4632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 29259 - 29201
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||| ||||||||||||||||||||  ||| ||||||||||||||||    
T  29259 attaaatagttttatattctatttaagaaattttgaattagtagtgtgacatgcccgtt 29201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 25453 - 25351
Alignment:
Q  158 gatgaaaccgtttaagttgttgtttattaaatag-atttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactctta 255  Q
    |||||||| |||||||||| ||||||||||||||  |||||| ||||||||||||   || |||| || ||||||||||||||||| |||  |||||| |    
T  25453 gatgaaactgtttaagttgatgtttattaaatagtttttatattctatttaagaatgcttaaaaatgtagtgtgacatgcccgtttaggatttactctga 25354  T
Q  256 tgt 258  Q
    |||    
T  25353 tgt 25351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 42358 - 42401
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    |||||||||||||||||||||||  |||||| ||||||||||||    
T  42358 tctatttaagaaattttgaaaagcagtgtgatatgcccgtttgg 42401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 369936 - 369854
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| ||||||  |||||||||||| ||||||  ||| |||||||||||||||||||||  || ||| ||||||||||    
T  369936 attaaatagttttatatgctatttaagaaaatttgaattagtagtgtgacatgcccgtttgggatttattctgatgtatgttt 369854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 4231 - 4159
Alignment:
Q  171 aagttgttgtttattaaatagatttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgg 243  Q
    |||||| ||||||||||||||  ||||| |||||||||||| |||||||| ||  |||||||||||||||||||    
T  4231 aagttgatgtttattaaatagtattatattctatttaagaa-ttttgaaatagcagtgtgacatgcccgtttgg 4159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 219
Target Start/End: Complemental strand, 22593 - 22442
Alignment:
Q  67 gaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaa-atatcccgctgcaaagtctcgatgaaac 165  Q
    ||||||||||||||| |||||||  |||| ||||||| | ||| | ||||| |||||||||  | |||||| |||| ||||||||| || | | ||||||    
T  22593 gaggcttttatgccaggattattatttggtgaattaa-aggtttgatgttgatgttatttat-tattgaaagatattccgctgcaaggttttggtgaaac 22496  T
Q  166 cgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaa 219  Q
       | |||||| ||||||||||||||  || || ||||||||||||||||||||    
T  22495 taatgaagttggtgtttattaaatagtattttattctatttaagaaattttgaa 22442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 25339 - 25275
Alignment:
Q  178 tgtttattaaatag-atttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||   ||||||||||||||||||    
T  25339 tgtttattaaatagtatttatt-tctatttaagaaattttgaaaaacagtgtgacatgcccgtttg 25275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 30841 - 30777
Alignment:
Q  178 tgtttattaaatag-atttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||   ||||||||||||||||||    
T  30841 tgtttattaaatagtatttatt-tctatttaagaaattttgaaaaacagtgtgacatgcccgtttg 30777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 103594 - 103659
Alignment:
Q  180 tttattaaatagatttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttggg 244  Q
    |||||||||||| |||| | |||||||||||||||||||||  |  ||||||||||||||||||||    
T  103594 tttattaaatagttttacattctatttaagaaattttgaaattgaagtgtgacatgcccgtttggg 103659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 171 - 255
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  171 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 2088 - 2020
Alignment:
Q  179 gtttattaaatagatttataat-ctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    ||||||||||||| |||||| | |||||||||||| |||||||| |  |||||||||||||||||||||    
T  2088 gtttattaaatagttttatatttctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttggga 2020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 4838 - 4878
Alignment:
Q  201 ctatttaagaaattttgaaaagtggtgtgacatgcccgttt 241  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  4838 ctatttaagaaattttgaaaagcagtgtgacatgcccgttt 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 15927 - 15987
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  15927 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 15987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 28423 - 28483
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  28423 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 28483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 2990 - 3058
Alignment:
Q  178 tgtttattaaataga-tttataatctatttaagaaattttgaaaagt-ggtgtgacatgcccgtttggg 244  Q
    ||||||||||||||| ||| || | |||||||||||||||||||| |  ||||||||||||||||||||    
T  2990 tgtttattaaatagagtttttattttatttaagaaattttgaaaattatgtgtgacatgcccgtttggg 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 17761 - 17813
Alignment:
Q  193 tttataatctatttaagaaattttgaaaagt-ggtgtgacatgcccgtttggg 244  Q
    |||||| |||||||||||||||||||||| |  ||||||||||||||||||||    
T  17761 tttatattctatttaagaaattttgaaaattaagtgtgacatgcccgtttggg 17813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 6321 - 6261
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  6321 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttgg 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 32295 - 32347
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggg 244  Q
    |||||| |||||||||| ||||||||||| || ||||||||||||||||||||    
T  32295 tttatattctatttaaggaattttgaaaatgtagtgtgacatgcccgtttggg 32347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 25111 - 25035
Alignment:
Q  178 tgtttattaaatagatttataatctatttaagaa-attttgaaaagtggtgtgacatgcccgtttgggacatactct 253  Q
    |||||||||||||| ||||||  ||||||||||| |||||||||| | ||||||||||  | ||||||| |||||||    
T  25111 tgtttattaaatagttttatatcctatttaagaagattttgaaaaatagtgtgacatgttcatttgggatatactct 25035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 31300 - 31240
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttgg 243  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  |||||||||||||    
T  31300 attaaatagttttattttctatttaagaaattttgaaacgtagtgtagcatgcccgtttgg 31240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 87248 - 87164
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||||||||||    
T  87248 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtatgttt 87164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 143402 - 143343
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaa--agtggtgtgacatgcccgtt 240  Q
    ||||||||| |||||| ||||||||||| |||||||||  ||| ||||||||||||||||    
T  143402 attaaatagttttatattctatttaagatattttgaaaatagtagtgtgacatgcccgtt 143343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 543 - 602
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtttg 242  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  ||||||||||||    
T  543 attaaatagttttattttctatttaagaaattttgaaatgtagtgtagcatgcccgtttg 602  T

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Target: scaffold0342 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 17529 - 17601
Alignment:
Q  178 tgtttattaaataga----tttataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttggga 245  Q
    |||||||||||||||    |||||| ||||||||||||| |||||||| || | |||||||||||||||||||    
T  17529 tgtttattaaatagagttttttatattctatttaagaaaatttgaaaatgtagcgtgacatgcccgtttggga 17601  T

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Target: scaffold0243 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 8687 - 8770
Alignment:
Q  183 attaaatagattt-ataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||||||| |||  ||||||||||||||||| |  ||| ||||||||||||||||||| |  |||||| ||||||||||    
T  8687 attaaatagattttataggctatttaagaaattttggattagtagtgtgacatgcccgtttggaatttactctgatgtatgttt 8770  T

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Target: scaffold0167 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 6433 - 6366
Alignment:
Q  193 tttataatctatttaagaaattttgaaaa-gtggtgtgacatgccc-gtttgggacatactcttatgt 258  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||  ||||||| ||||||| ||||    
T  6433 tttatattctatttaagaaatttttaaaatgtggtgtgacatgcccattttgggatatactctgatgt 6366  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 172463 - 172547
Alignment:
Q  178 tgtttattaaatagattt-ataatctatttaagaaattttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||| ||||||||||||    |||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  172463 tgtttattaaatagattttatattctatttaagaa----tgaaaatgtagtgtgacatgcccgtttgggaattactctgatgcatgttt 172547  T

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Target: scaffold1098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 1439 - 1271
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttg-aaaatatcccgctgcaaagtctcgatgaaa 164  Q
    |||||| ||| ||||| ||||  ||||||||||||||| ||||| | ||||| ||| |||||    ||| ||||||| |||||||||||| | | |||||    
T  1439 tgaggcctttgtgccaggatttattattggagaattaa-atgtttgatgttgatgtaattta----ttgaaaaatattccgctgcaaagttttggtgaaa 1345  T
Q  165 ccgtttaagttgttgtttattaaatagatttataatctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    |   |||||||| | ||||||||||||  || || ||||||||||||| |||||||||  ||||||||| ||||||    
T  1344 ctaattaagttgat-tttattaaatagtattttattctatttaagaaa-tttgaaaagcagtgtgacattcccgtt 1271  T

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Target: scaffold0323 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 6784 - 6695
Alignment:
Q  178 tgtttattaaatagatttataa--tctatttaagaaattttgaaaag-tggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    |||||||||||||||||| ||   ||||||||||| ||||||||||  | ||||||| | |||||||||||  |||||| ||||||||||    
T  6784 tgtttattaaatagatttttacattctatttaagacattttgaaaatatagtgtgacgtacccgtttgggaattactctgatgtatgttt 6695  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 141000 - 140916
Alignment:
Q  20 tggaacatgttgatatagccctttatttggttgttgaagtaat--tgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||| ||| | ||||||| ||||||| | | ||  ||||||||||||||||||||||||| ||  |||||||||||    
T  141000 tggaacatgttgatgtagtc-tttatttagttgttggaattatgatgatgaggcttttatgccaagattactttatggagaattaa 140916  T

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Target: scaffold1684 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 1110 - 1026
Alignment:
Q  66 tgaggcttttatgccaagattatttattggagaattaatatgttggttgttgttgttatttaaatgttgaaaatatcccgctgcaa 151  Q
    |||||||||||||||| |  ||||||| ||||| |   ||| |||| ||||||||||| ||||| ||||||||||| |||||||||    
T  1110 tgaggcttttatgccatggatatttatcggagattacttatattggatgttgttgttaattaaa-gttgaaaatattccgctgcaa 1026  T

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Target: scaffold0947 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 367 - 408
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    |||||||||||||||||||||||||| ||  |||||||||||    
T  367 ttgatgaggcttttatgccaagattactttatggagaattaa 408  T

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Target: scaffold0309 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 5406 - 5334
Alignment:
Q  171 aagttgttgtttattaaatagatttataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttgg 243  Q
    |||||| ||||||||||||||  ||||| |||||||||| |||||||||| ||  |||||||||| ||||||||    
T  5406 aagttgatgtttattaaatagtattatattctatttaag-aattttgaaatagcagtgtgacatgtccgtttgg 5334  T

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Target: scaffold1488 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 82 - 166
Alignment:
Q  183 attaaatagatttataat-ctatttaagaaat-tttgaaaa-gtggtgtgacatgcccgtttgggacatactcttatgtatgttt 264  Q
    ||||||||| |||||| | ||||||||||||  |||||||| || |||||||||||||||||||||  |||||| ||| ||||||    
T  82 attaaatagttttatatttctatttaagaaaaatttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgcatgttt 166  T

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Target: scaffold0575 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 765 - 805
Alignment:
Q  200 tctatttaagaaattttgaaaagtggtgtgacatgcccgtt 240  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  765 tctatttaagaaattttgaaaaaaagtgtgacatgcccgtt 805  T

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Target: scaffold0535 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 6546 - 6586
Alignment:
Q  63 tgatgaggcttttatgccaagattatttattggagaattaa 103  Q
    ||||||||||||||||||||||||| ||  |||||||||||    
T  6546 tgatgaggcttttatgccaagattactttatggagaattaa 6586  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 7934 - 8014
Alignment:
Q  183 attaaatagatttataatctatttaagaaattttgaa-aagtggtgtgacatgcccgtttgggacatactcttatgtatgt 262  Q
    ||||||||| ||||||  |||||||||||| ||||||  ||| ||||||||||| |||||||||  |||| | ||||||||    
T  7934 attaaatagttttatatgctatttaagaaaatttgaattagtagtgtgacatgctcgtttgggatttactgtgatgtatgt 8014  T

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Target: scaffold0220 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 9973 - 9937
Alignment:
Q  62 ttgatgaggcttttatgccaagattatttattggaga 98  Q
    |||||||| |||||||||||||||||||| |||||||    
T  9973 ttgatgagacttttatgccaagattatttgttggaga 9937  T

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Target: scaffold0190 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 28056 - 28104
Alignment:
Q  193 tttataatctatttaagaaattttga-aaagtggtgtgacatgcccgtt 240  Q
    |||||| ||||||||||||||||||| | ||| ||||||||||||||||    
T  28056 tttatattctatttaagaaattttgatatagtagtgtgacatgcccgtt 28104  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 42274 - 42338
Alignment:
Q  182 tattaaatagattt-ataatctatttaagaaattttgaaa-agtggtgtgacatgcccgtttggg 244  Q
    |||||||||||||| ||| ||||||||  ||||||||||  ||| ||||||||||||||||||||    
T  42274 tattaaatagattttatattctatttataaaattttgaattagtagtgtgacatgcccgtttggg 42338  T

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Target: scaffold0067 (Bit Score: 29; Significance: 0.0000004; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 48048 - 48123
Alignment:
Q  137 aatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatag-atttataatctatttaagaaa 212  Q
    ||||| |||||||||||| | |||||||| ||||  |||| ||||||||||||||  |||||| |||||||||||||    
T  48048 aatattccgctgcaaagttt-gatgaaactgttttggttgatgtttattaaatagtttttatattctatttaagaaa 48123  T

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Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 57082 - 57157
Alignment:
Q  137 aatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatag-atttataatctatttaagaaa 212  Q
    ||||| |||||||||||| | |||||||| ||||  |||| ||||||||||||||  |||||| |||||||||||||    
T  57082 aatattccgctgcaaagttt-gatgaaactgttttggttgatgtttattaaatagtttttatattctatttaagaaa 57157  T

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Target: scaffold0067; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 63468 - 63543
Alignment:
Q  137 aatatcccgctgcaaagtctcgatgaaaccgtttaagttgttgtttattaaatag-atttataatctatttaagaaa 212  Q
    ||||| |||||||||||| | |||||||| ||||  |||| ||||||||||||||  |||||| |||||||||||||    
T  63468 aatattccgctgcaaagttt-gatgaaactgttttggttgatgtttattaaatagtttttatattctatttaagaaa 63543  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 40726 - 40674
Alignment:
Q  193 tttataatctatttaagaaattttga-aaagtggtgtgacatgcccgtttggg 244  Q
    |||||| ||||||||||||||||||| | ||| |||||||||||| |||||||    
T  40726 tttatattctatttaagaaattttgatatagtagtgtgacatgcctgtttggg 40674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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