View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19860_high_15 (Length: 455)
Name: NF19860_high_15
Description: NF19860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19860_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 417
Target Start/End: Original strand, 418452 - 418859
Alignment:
| Q |
1 |
tgtgatagagagcatctgcaggttgatatgtaagtaatattattactgagtttagtagtacagctatatagcttccatataggagacagcttgacggctt |
100 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
418452 |
tgtgatagagagcatctgcaggttgatatgtaa----tattattactgagtttagtagtacagctatatagcttccatataggagacagcttgacggctt |
418547 |
T |
|
| Q |
101 |
gggattccaatataaatgttctcagctataaatcaaagatgtgggaatcccaattttcataacaaaatttcacatacatgatcactccatttttgtggtn |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
418548 |
gggattccaatataaatgttctcagctataaatcaaagatgtgggaatcccaattttcataacaaaatttcacatacatgatcactccatttttgtggta |
418647 |
T |
|
| Q |
201 |
nnnnnngagtacaagacaaaaggaaaataaataattcattacctaaaaaatgaatgtgtgtgttaatagcatgcattgcatagggcctgaacaacccgtg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
418648 |
aaaaaagagtacaagacaaaaggaaaataaataattcattacctaaaaaatgaatgtgtgtgttaatagca-----tgcatagggcctgaacaacccgtg |
418742 |
T |
|
| Q |
301 |
ttcagctgctgccaccacactctgatcactcaaacagacacctactatttccgggtaaatacaaattcatggggccattttcctcttctacgctttacca |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
418743 |
ttcagctgctgccaccacactctgatcactcaaacagacacctactatttccgggtaaatacaaattgatggggccattttcctcttctacgctttacca |
418842 |
T |
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| Q |
401 |
taactattattactttc |
417 |
Q |
| |
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||||||||||||||||| |
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| T |
418843 |
taactattattactttc |
418859 |
T |
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