View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19860_high_33 (Length: 351)
Name: NF19860_high_33
Description: NF19860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19860_high_33 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 13 - 336
Target Start/End: Original strand, 31215042 - 31215365
Alignment:
| Q |
13 |
aatatcactggtgtcataccatcaacacttttggaggcaaaccagctaggcaagctccacctttcttcaaaccacctaacaggaaagcttccaaaggaac |
112 |
Q |
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| T |
31215042 |
aatatcactggtgtcataccattaacactttcggaggcaaaccagctagtcaggctccacctttcttcaaaccacttaacaggaaagcttccaaaggaac |
31215141 |
T |
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| Q |
113 |
ttggatacctgaaatcattacttcaagttaagatcagcaacaatcaattttcaggaaatattccaagtgaaattggattgctacagaaacttgaagattt |
212 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31215142 |
ttggatacctgaaatcattacttgaagttaagatcagcaacaatcaattttctggaaatattccaagtgaaattggattgctacagaaacttgaagattt |
31215241 |
T |
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| Q |
213 |
tgatgtaggaggaaacatgttgagtggaacaataccaaaagaagttatgaagttgcccttgttacggaacttgaacttgagcaaaaacaaaattgaaggg |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
31215242 |
tgatgtaggaggaaacatgttgagtggaacaataccaaaagaagttgtgaagttgcccttgttacggaacttgaacttgagcaaaaacaaaattaaaggg |
31215341 |
T |
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| Q |
313 |
aaaattccctcagactttgtcctg |
336 |
Q |
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|||||||||||||||||||||||| |
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| T |
31215342 |
aaaattccctcagactttgtcctg |
31215365 |
T |
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